@open-agent-toolkit/cli 0.2.57 → 0.2.59

package/dist/commands/status/index.js

@@ -17,7 +17,7 @@ import { detectDrift, detectStrays, filterKnownStrays, } from '../../drift/index
 import { HOOK_DRIFT_WARNING, HOOK_STRAY_INFO, mergeUserScopeMaterializationEntries, scanBundledManagedAgents, scanCanonical, } from '../../engine/index.js';
 import { resolveAssetsRoot } from '../../fs/assets.js';
 import { normalizeToPosixPath, resolveProjectRoot, resolveScopeRoot, } from '../../fs/paths.js';
-import { loadManifest, saveManifest } from '../../manifest/manager.js';
+import { detectManifestVersionRestamp, formatManifestVersionRestampWarning, loadManifest, saveManifest, } from '../../manifest/manager.js';
 import { applyCodexProjectExtensionPlan, computeCodexProjectExtensionPlan, } from '../../providers/codex/codec/sync-extension.js';
 import { applyCursorProjectExtensionPlan, computeCursorProjectExtensionPlan, } from '../../providers/cursor/codec/sync-extension.js';
 import { getConfigAwareAdapters, getProviderRegistrations, getSyncMappings, resolveProviderScopeContext, } from '../../providers/shared/index.js';
@@ -651,6 +651,7 @@ async function collectScopeReports(scope, context, dependencies) {
         activeAdapterNames,
         userAgentMaterializationCoverage: scope === 'user' ? agentCoverage : 'none',
         providerContext,
+        versionRestamp: detectManifestVersionRestamp(scope, manifest),
     };
 }
 async function runStatusCommand(context, dependencies, options = {}) {
@@ -844,6 +845,12 @@ async function runStatusCommand(context, dependencies, options = {}) {
                     }
                 }
                 if (manifestChanged) {
+                    // Placed after the collection-migration block and immediately before
+                    // the only status-owned save. An aborted migration never reaches
+                    // here, so it never claims a restamp it did not perform.
+                    if (scopeCollection.versionRestamp && !context.json) {
+                        context.logger.warn(formatManifestVersionRestampWarning('status', scopeCollection.versionRestamp));
+                    }
                     await dependencies.saveManifest(scopeCollection.manifestPath, scopeCollection.manifest);
                 }
                 if (adoptedCount > 0) {

package/dist/commands/sync/apply.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"apply.d.ts","sourceRoot":"","sources":["../../../src/commands/sync/apply.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AAiB3D,OAAO,KAAK,EACV,aAAa,EACb,uBAAuB,EAExB,MAAM,cAAc,CAAC;AA2TtB,wBAAsB,YAAY,CAChC,OAAO,EAAE,cAAc,EACvB,UAAU,EAAE,aAAa,EAAE,EAC3B,YAAY,EAAE,uBAAuB,GACpC,OAAO,CAAC,IAAI,CAAC,CA4Kf"}
+{"version":3,"file":"apply.d.ts","sourceRoot":"","sources":["../../../src/commands/sync/apply.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AAiB3D,OAAO,KAAK,EACV,aAAa,EACb,uBAAuB,EAExB,MAAM,cAAc,CAAC;AAgVtB,wBAAsB,YAAY,CAChC,OAAO,EAAE,cAAc,EACvB,UAAU,EAAE,aAAa,EAAE,EAC3B,YAAY,EAAE,uBAAuB,GACpC,OAAO,CAAC,IAAI,CAAC,CAoMf"}

package/dist/commands/sync/apply.js

@@ -126,13 +126,26 @@ function coreHumanStatus(status) {
             return 'unknown';
     }
 }
-function formatCoreResults(plan, evidence, dependencies) {
+/** The sentence `formatSyncPlan` appends to its heading for an empty plan. */
+const EMPTY_PLAN_SUFFIX = '\nNo changes required.';
+function formatCoreResults(plan, evidence, dependencies, restampOnly) {
     const operations = [...plan.entries, ...plan.removals];
     if (operations.length === 0) {
         if ((plan.collections?.length ?? 0) > 0) {
             return 'Core results\nNo per-entry operations.';
         }
-        return dependencies.formatSyncPlan(plan, true);
+        const planOutput = dependencies.formatSyncPlan(plan, true);
+        if (!restampOnly || !planOutput.endsWith(EMPTY_PLAN_SUFFIX)) {
+            return planOutput;
+        }
+        // `formatSyncPlan` appends "No changes required." to its heading for any
+        // empty plan, and it is shared with dry-run and other callers, so it stays
+        // untouched. On the restamp-only path that sentence would contradict the
+        // trailing message two lines later, so the command layer drops exactly that
+        // known suffix and lets the trailing message be the run's single claim.
+        // Removing only a matching suffix, rather than keeping the first line,
+        // means an injected formatter's other content is never truncated.
+        return planOutput.slice(0, -EMPTY_PLAN_SUFFIX.length);
     }
     const resultsByIdentity = new Map((evidence?.operationResults ?? []).map((result) => [
         syncOperationIdentity(result),
@@ -155,7 +168,12 @@ function formatCoreResults(plan, evidence, dependencies) {
         : '';
     return `Core results${aggregate}\n${lines.join('\n')}`;
 }
-function formatAppliedOutput(scopePlans, coreApplyEvidence, dependencies) {
+function formatAppliedOutput(scopePlans, coreApplyEvidence, dependencies, 
+// True when the run planned no operation at all and the manifest restamp is
+// the only mutation. It is a whole-run state, matching the single trailing
+// summary message, so with `--scope all` every scope's body is empty and at
+// least one of them was restamped.
+restampOnly) {
     if (scopePlans.length === 0) {
         return dependencies.formatSyncPlan({
             scope: 'project',
@@ -165,7 +183,7 @@ function formatAppliedOutput(scopePlans, coreApplyEvidence, dependencies) {
     }
     return scopePlans
         .map((scopePlan) => {
-        const syncOutput = formatCoreResults(scopePlan.plan, coreApplyEvidence.find((evidence) => evidence.plan === scopePlan.plan), dependencies);
+        const syncOutput = formatCoreResults(scopePlan.plan, coreApplyEvidence.find((evidence) => evidence.plan === scopePlan.plan), dependencies, restampOnly);
         const collectionOutput = formatCollectionLifecycle(buildCollectionLifecycle(scopePlan, coreApplyEvidence.find((evidence) => evidence.plan === scopePlan.plan)
             ?.collectionResults));
         if (scopePlan.materializationExtensions.length === 0) {
@@ -310,9 +328,25 @@ export async function runSyncApply(context, scopePlans, dependencies) {
         });
     }
     else {
-        context.logger.info(formatAppliedOutput(scopePlans, coreApplyEvidence, dependencies));
+        // A restamp is a real mutation: it overwrites the producing-version
+        // evidence even though no file operation was planned. Reporting "no
+        // changes required" for that case would contradict the advisory this same
+        // run just emitted, so the state is resolved once and threaded through
+        // both the plan body and the trailing message.
+        //
+        // `failed === 0` is load-bearing rather than defensive: a rejected
+        // collection is counted as a failure but is not a *planned* operation
+        // (`countPlannedOperations` admits only the mutating collection actions),
+        // so a run can fail with `plannedOperations === 0`. That run is not
+        // restamp-only and must never be described as needing no content changes.
+        const restampOnly = summary.plannedOperations === 0 &&
+            summary.failed === 0 &&
+            versionSkew.length > 0;
+        context.logger.info(formatAppliedOutput(scopePlans, coreApplyEvidence, dependencies, restampOnly));
         if (summary.plannedOperations === 0) {
-            context.logger.info('\nNo changes required.');
+            context.logger.info(restampOnly
+                ? '\nManifest version refreshed; no content changes required.'
+                : '\nNo changes required.');
         }
         else if (summary.failed > 0) {
             context.logger.warn('\nSync completed with partial failures.');

package/dist/commands/sync/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/commands/sync/index.ts"],"names":[],"mappings":"AAcA,OAAO,EAGL,KAAK,UAAU,EAEhB,MAAM,eAAe,CAAC;AAWvB,OAAO,EAOL,KAAK,oBAAoB,EAC1B,MAAM,mBAAmB,CAAC;AAE3B,OAAO,EAEL,KAAK,mBAAmB,EACxB,KAAK,aAAa,EACnB,MAAM,eAAe,CAAC;AAEvB,OAAO,EAAE,OAAO,EAAU,MAAM,WAAW,CAAC;AAI5C,OAAO,KAAK,EACV,aAAa,EAEb,uBAAuB,EAGxB,MAAM,cAAc,CAAC;AAEtB,KAAK,0BAA0B,GAAG,IAAI,CACpC,uBAAuB,EACvB,iBAAiB,GAAG,eAAe,CACpC,GAAG;IACF,aAAa,EAAE,CACb,SAAS,EAAE,MAAM,EACjB,KAAK,EAAE,aAAa,EACpB,OAAO,CAAC,EAAE,SAAS,mBAAmB,EAAE,KACrC,UAAU,CAAC,uBAAuB,CAAC,eAAe,CAAC,CAAC,CAAC;IAC1D,eAAe,EAAE,CACf,IAAI,EAAE,UAAU,CAAC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG;QAChE,sCAAsC,CAAC,EAAE,QAAQ,CAC/C,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CAClC,CAAC;KACH,KACE,UAAU,CAAC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC,CAAC;IAC5D,2BAA2B,CAAC,EAAE,CAAC,KAAK,EAAE;QACpC,KAAK,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC;QAC9B,SAAS,EAAE,MAAM,CAAC;QAClB,MAAM,EAAE,UAAU,CAAC;KACpB,KAAK,OAAO,CAAC,oBAAoB,CAAC,CAAC;CACrC,CAAC;AAkgBF,wBAAgB,iBAAiB,CAC/B,SAAS,GAAE,OAAO,CAAC,0BAA0B,CAAM,GAClD,OAAO,CA+DT"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/commands/sync/index.ts"],"names":[],"mappings":"AAcA,OAAO,EAGL,KAAK,UAAU,EAEhB,MAAM,eAAe,CAAC;AAWvB,OAAO,EAOL,KAAK,oBAAoB,EAC1B,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAEL,KAAK,mBAAmB,EACxB,KAAK,aAAa,EACnB,MAAM,eAAe,CAAC;AAEvB,OAAO,EAAE,OAAO,EAAU,MAAM,WAAW,CAAC;AAI5C,OAAO,KAAK,EACV,aAAa,EAEb,uBAAuB,EAGxB,MAAM,cAAc,CAAC;AAEtB,KAAK,0BAA0B,GAAG,IAAI,CACpC,uBAAuB,EACvB,iBAAiB,GAAG,eAAe,CACpC,GAAG;IACF,aAAa,EAAE,CACb,SAAS,EAAE,MAAM,EACjB,KAAK,EAAE,aAAa,EACpB,OAAO,CAAC,EAAE,SAAS,mBAAmB,EAAE,KACrC,UAAU,CAAC,uBAAuB,CAAC,eAAe,CAAC,CAAC,CAAC;IAC1D,eAAe,EAAE,CACf,IAAI,EAAE,UAAU,CAAC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG;QAChE,sCAAsC,CAAC,EAAE,QAAQ,CAC/C,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CAClC,CAAC;KACH,KACE,UAAU,CAAC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC,CAAC;IAC5D,2BAA2B,CAAC,EAAE,CAAC,KAAK,EAAE;QACpC,KAAK,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC;QAC9B,SAAS,EAAE,MAAM,CAAC;QAClB,MAAM,EAAE,UAAU,CAAC;KACpB,KAAK,OAAO,CAAC,oBAAoB,CAAC,CAAC;CACrC,CAAC;AA2fF,wBAAgB,iBAAiB,CAC/B,SAAS,GAAE,OAAO,CAAC,0BAA0B,CAAM,GAClD,OAAO,CA+DT"}

package/dist/commands/sync/index.js

@@ -8,9 +8,8 @@ import { DEFAULT_SYNC_CONFIG, loadSyncConfig, saveSyncConfig, } from '../../conf
 import { computeSyncPlan, executeSyncPlan, mergeUserScopeMaterializationEntries, scanBundledManagedAgents, scanCanonical, } from '../../engine/index.js';
 import { CliError } from '../../errors/index.js';
 import { resolveProjectRoot, resolveScopeRoot } from '../../fs/paths.js';
-import { loadManifest } from '../../manifest/index.js';
+import { detectManifestVersionRestamp, loadManifest } from '../../manifest/index.js';
 import { getConfigAwareAdapters, getProviderRegistrations, recomputeProviderScopeContext, resolveProviderScopeContext, toMaterializationOperations, } from '../../providers/shared/index.js';
-import { OAT_VERSION } from '../../shared/oat-version.js';
 import { USER_SCOPE_MANAGED_AGENT_FILES, } from '../../shared/types.js';
 import { formatSyncPlan } from '../../ui/output.js';
 import { Command, Option } from 'commander';
@@ -165,26 +164,21 @@ async function maybeResolveProviderMismatches(context, scope, scopeRoot, configP
 /**
  * Derive the advisory version-skew diagnostic for a loaded scope manifest.
  *
- * This is the single source of truth for "this manifest was produced by a
- * different CLI version": `runSyncApply` keys its manifest restamp off the
- * presence of this diagnostic, so a restamp can never destroy the provenance
- * evidence without the advisory having been emitted first.
+ * `runSyncApply` keys its manifest restamp off the presence of this diagnostic,
+ * so a restamp can never destroy the provenance evidence without the advisory
+ * having been emitted first.
  *
- * Comparison is plain string inequality on identity, never semantic-version
- * ordering. An absent manifest therefore never reports skew, because
- * `loadManifest` deliberately creates an empty manifest stamped with the
- * invoking version and the two strings match. `ManifestSchema` rejects an
- * *empty* `oatVersion` before sync ever sees it, but it does admit other
+ * The comparison itself is `detectManifestVersionRestamp`, shared with every
+ * other command that saves a manifest: plain string inequality on identity,
+ * never semantic-version ordering. An absent manifest therefore never reports
+ * skew, because `loadManifest` deliberately creates an empty manifest stamped
+ * with the invoking version and the two strings match. `ManifestSchema` rejects
+ * an *empty* `oatVersion` before sync ever sees it, but it does admit other
  * degenerate strings such as whitespace-only values; those surface here as
  * ordinary skew rather than being reclassified as corruption.
  */
 function detectVersionSkew(scope, manifest) {
-    const producingVersion = manifest.oatVersion;
-    const invokingVersion = OAT_VERSION;
-    if (producingVersion === invokingVersion) {
-        return undefined;
-    }
-    return { scope, producingVersion, invokingVersion };
+    return detectManifestVersionRestamp(scope, manifest);
 }
 function isPathWithin(root, candidate) {
     const relativePath = relative(resolve(root), resolve(candidate));

package/dist/commands/sync/sync.types.d.ts

@@ -4,7 +4,7 @@ import type { SyncConfig } from '../../config/index.js';
 import type { CollectionProjectionPlan, SyncOperationResult } from '../../engine/engine.types.js';
 import type { CollectionOperationResult } from '../../engine/execute-plan.js';
 import type { CanonicalEntry, ScanBundledManagedAgentsOptions, SyncPlan, SyncResult } from '../../engine/index.js';
-import type { Manifest } from '../../manifest/index.js';
+import type { Manifest, ManifestVersionRestamp } from '../../manifest/index.js';
 import type { ConfigAwareAdaptersResult, MaterializationApplyResult, MaterializationExtension, MaterializationOperation, MaterializationPlan, ProviderAdapter } from '../../providers/shared/index.js';
 import type { MaterializationOperationResult } from '../../providers/shared/materialization-extension.js';
 import type { ConcreteScope, Scope } from '../../shared/types.js';
@@ -20,12 +20,12 @@ export interface CanonicalSyncFilter {
  * Advisory diagnostic emitted when the CLI version that produced a scope's sync
  * manifest differs from the CLI version invoking sync. Comparison is symmetric
  * string inequality: the contract is version identity, not which side is newer.
+ *
+ * Sync's scoped view of the shared manifest diagnostic. It is an alias rather
+ * than a parallel declaration so sync's semantics cannot drift from the
+ * comparison every other save site uses.
  */
-export interface SyncVersionSkew {
-    scope: ConcreteScope;
-    producingVersion: string;
-    invokingVersion: string;
-}
+export type SyncVersionSkew = ManifestVersionRestamp<ConcreteScope>;
 export interface ScopeSyncPlan {
     scope: ConcreteScope;
     scopeRoot: string;

package/dist/commands/sync/sync.types.d.ts.map

@@ -1 +1 @@
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package/dist/config/resolve.d.ts

@@ -16,6 +16,22 @@ export interface ResolveEffectiveConfigDependencies {
     readUserConfig: (userConfigDir: string) => Promise<UserConfig>;
 }
 export declare function resolveEffectiveConfig(repoRoot: string, userConfigDir: string, env?: NodeJS.ProcessEnv, overrides?: Partial<ResolveEffectiveConfigDependencies>): Promise<ResolvedConfig>;
+/** Concrete config layer that declared a skill gate. */
+export type GateConfigSource = 'local' | 'shared' | 'user';
+export interface ResolvedGateWithSource {
+    gate: GateConfig | null;
+    /**
+     * Layer that decided the result, or null when no layer declares the skill.
+     * A layer that declares the skill as `null` still owns the decision, so the
+     * source is reported even though the effective gate is null.
+     */
+    source: GateConfigSource | null;
+}
+/**
+ * Source-aware gate resolution. Identifies the deciding layer without changing
+ * the precedence `resolveGate` has always used.
+ */
+export declare function resolveGateWithSource(effective: ResolvedConfig, skillName: string): ResolvedGateWithSource;
 export declare function resolveGate(effective: ResolvedConfig, skillName: string): GateConfig | null;
 export declare function resolveExecTargets(effective: ResolvedConfig): Record<string, ExecTarget>;
 export type ExecTargetOrigin = 'builtin' | 'user' | 'shared' | 'local';

package/dist/config/resolve.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/config/resolve.ts"],"names":[],"mappings":"AACA,OAAO,EAML,KAAK,UAAU,EACf,KAAK,UAAU,EACf,KAAK,SAAS,EACd,KAAK,cAAc,EACnB,KAAK,UAAU,EAChB,MAAM,cAAc,CAAC;AAEtB,MAAM,MAAM,oBAAoB,GAC5B,QAAQ,GACR,OAAO,GACP,MAAM,GACN,KAAK,GACL,SAAS,CAAC;AAEd,MAAM,WAAW,gBAAgB;IAC/B,KAAK,EAAE,OAAO,CAAC;IACf,MAAM,EAAE,oBAAoB,CAAC;CAC9B;AAED,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,CAAC;IAClB,KAAK,EAAE,cAAc,CAAC;IACtB,IAAI,EAAE,UAAU,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,gBAAgB,CAAC,CAAC;CAC5C;AAED,MAAM,WAAW,kCAAkC;IACjD,aAAa,EAAE,CAAC,QAAQ,EAAE,MAAM,KAAK,OAAO,CAAC,SAAS,CAAC,CAAC;IACxD,kBAAkB,EAAE,CAAC,QAAQ,EAAE,MAAM,KAAK,OAAO,CAAC,cAAc,CAAC,CAAC;IAClE,cAAc,EAAE,CAAC,aAAa,EAAE,MAAM,KAAK,OAAO,CAAC,UAAU,CAAC,CAAC;CAChE;AAmHD,wBAAsB,sBAAsB,CAC1C,QAAQ,EAAE,MAAM,EAChB,aAAa,EAAE,MAAM,EACrB,GAAG,GAAE,MAAM,CAAC,UAAwB,EACpC,SAAS,GAAE,OAAO,CAAC,kCAAkC,CAAM,GAC1D,OAAO,CAAC,cAAc,CAAC,CAgFzB;AAED,wBAAgB,WAAW,CACzB,SAAS,EAAE,cAAc,EACzB,SAAS,EAAE,MAAM,GAChB,UAAU,GAAG,IAAI,CAcnB;AAED,wBAAgB,kBAAkB,CAChC,SAAS,EAAE,cAAc,GACxB,MAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAY5B;AAED,MAAM,MAAM,gBAAgB,GAAG,SAAS,GAAG,MAAM,GAAG,QAAQ,GAAG,OAAO,CAAC;AAEvE,MAAM,WAAW,sBAAsB;IACrC,MAAM,EAAE,UAAU,CAAC;IACnB,MAAM,EAAE,gBAAgB,CAAC;IACzB,oBAAoB,EAAE,OAAO,CAAC;IAC9B,OAAO,EAAE,OAAO,CAAC;CAClB;AAED,wBAAgB,sBAAsB,CACpC,SAAS,EAAE,cAAc,GACxB,MAAM,CAAC,MAAM,EAAE,sBAAsB,CAAC,CAoDxC"}
+{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/config/resolve.ts"],"names":[],"mappings":"AACA,OAAO,EAML,KAAK,UAAU,EACf,KAAK,UAAU,EACf,KAAK,SAAS,EACd,KAAK,cAAc,EACnB,KAAK,UAAU,EAChB,MAAM,cAAc,CAAC;AAEtB,MAAM,MAAM,oBAAoB,GAC5B,QAAQ,GACR,OAAO,GACP,MAAM,GACN,KAAK,GACL,SAAS,CAAC;AAEd,MAAM,WAAW,gBAAgB;IAC/B,KAAK,EAAE,OAAO,CAAC;IACf,MAAM,EAAE,oBAAoB,CAAC;CAC9B;AAED,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,CAAC;IAClB,KAAK,EAAE,cAAc,CAAC;IACtB,IAAI,EAAE,UAAU,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,gBAAgB,CAAC,CAAC;CAC5C;AAED,MAAM,WAAW,kCAAkC;IACjD,aAAa,EAAE,CAAC,QAAQ,EAAE,MAAM,KAAK,OAAO,CAAC,SAAS,CAAC,CAAC;IACxD,kBAAkB,EAAE,CAAC,QAAQ,EAAE,MAAM,KAAK,OAAO,CAAC,cAAc,CAAC,CAAC;IAClE,cAAc,EAAE,CAAC,aAAa,EAAE,MAAM,KAAK,OAAO,CAAC,UAAU,CAAC,CAAC;CAChE;AAmHD,wBAAsB,sBAAsB,CAC1C,QAAQ,EAAE,MAAM,EAChB,aAAa,EAAE,MAAM,EACrB,GAAG,GAAE,MAAM,CAAC,UAAwB,EACpC,SAAS,GAAE,OAAO,CAAC,kCAAkC,CAAM,GAC1D,OAAO,CAAC,cAAc,CAAC,CAgFzB;AAED,wDAAwD;AACxD,MAAM,MAAM,gBAAgB,GAAG,OAAO,GAAG,QAAQ,GAAG,MAAM,CAAC;AAE3D,MAAM,WAAW,sBAAsB;IACrC,IAAI,EAAE,UAAU,GAAG,IAAI,CAAC;IACxB;;;;OAIG;IACH,MAAM,EAAE,gBAAgB,GAAG,IAAI,CAAC;CACjC;AAED;;;GAGG;AACH,wBAAgB,qBAAqB,CACnC,SAAS,EAAE,cAAc,EACzB,SAAS,EAAE,MAAM,GAChB,sBAAsB,CAkBxB;AAED,wBAAgB,WAAW,CACzB,SAAS,EAAE,cAAc,EACzB,SAAS,EAAE,MAAM,GAChB,UAAU,GAAG,IAAI,CAEnB;AAED,wBAAgB,kBAAkB,CAChC,SAAS,EAAE,cAAc,GACxB,MAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAY5B;AAED,MAAM,MAAM,gBAAgB,GAAG,SAAS,GAAG,MAAM,GAAG,QAAQ,GAAG,OAAO,CAAC;AAEvE,MAAM,WAAW,sBAAsB;IACrC,MAAM,EAAE,UAAU,CAAC;IACnB,MAAM,EAAE,gBAAgB,CAAC;IACzB,oBAAoB,EAAE,OAAO,CAAC;IAC9B,OAAO,EAAE,OAAO,CAAC;CAClB;AAED,wBAAgB,sBAAsB,CACpC,SAAS,EAAE,cAAc,GACxB,MAAM,CAAC,MAAM,EAAE,sBAAsB,CAAC,CAoDxC"}

package/dist/config/resolve.js

@@ -176,18 +176,26 @@ export async function resolveEffectiveConfig(repoRoot, userConfigDir, env = proc
         resolved,
     };
 }
-export function resolveGate(effective, skillName) {
-    for (const skills of [
-        effective.local.workflow?.gates?.skills,
-        effective.shared.workflow?.gates?.skills,
-        effective.user.workflow?.gates?.skills,
-    ]) {
+/**
+ * Source-aware gate resolution. Identifies the deciding layer without changing
+ * the precedence `resolveGate` has always used.
+ */
+export function resolveGateWithSource(effective, skillName) {
+    const layers = [
+        ['local', effective.local.workflow?.gates?.skills],
+        ['shared', effective.shared.workflow?.gates?.skills],
+        ['user', effective.user.workflow?.gates?.skills],
+    ];
+    for (const [source, skills] of layers) {
         if (!skills || !hasOwn(skills, skillName)) {
             continue;
         }
-        return skills[skillName] ?? null;
+        return { gate: skills[skillName] ?? null, source };
     }
-    return null;
+    return { gate: null, source: null };
+}
+export function resolveGate(effective, skillName) {
+    return resolveGateWithSource(effective, skillName).gate;
 }
 export function resolveExecTargets(effective) {
     const targets = cloneExecTargetRegistry(BUILTIN_EXEC_TARGETS);

package/dist/engine/execute-plan.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"execute-plan.d.ts","sourceRoot":"","sources":["../../src/engine/execute-plan.ts"],"names":[],"mappings":"AAGA,OAAO,EACL,aAAa,EAGb,gCAAgC,EAEhC,sBAAsB,EACtB,kCAAkC,EAGnC,MAAM,QAAQ,CAAC;AAEhB,OAAO,EAAE,YAAY,IAAI,eAAe,EAAE,MAAM,mBAAmB,CAAC;AACpE,OAAO,KAAK,EACV,QAAQ,EAGT,MAAM,0BAA0B,CAAC;AAElC,OAAO,EAGL,uBAAuB,EACxB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,wBAAwB,EAExB,QAAQ,EAER,UAAU,EACX,MAAM,gBAAgB,CAAC;AAIxB,UAAU,2BAA2B;IACnC,mBAAmB,CAAC,EAAE,MAAM,OAAO,CAAC,IAAI,CAAC,CAAC;IAC1C,YAAY,CAAC,EAAE,OAAO,eAAe,CAAC;IACtC,aAAa,CAAC,EAAE,OAAO,aAAa,CAAC;IACrC,sBAAsB,CAAC,EAAE,OAAO,sBAAsB,CAAC;IACvD,gCAAgC,CAAC,EAAE,OAAO,gCAAgC,CAAC;IAC3E,kCAAkC,CAAC,EAAE,OAAO,kCAAkC,CAAC;IAC/E,uBAAuB,CAAC,EAAE,OAAO,uBAAuB,CAAC;CAC1D;AAID,MAAM,WAAW,yBAAyB;IACxC,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,wBAAwB,CAAC,aAAa,CAAC,CAAC;IACrD,MAAM,EAAE,wBAAwB,CAAC,QAAQ,CAAC,CAAC;IAC3C,SAAS,EAAE,wBAAwB,CAAC,WAAW,CAAC,CAAC;IACjD,MAAM,EACF,SAAS,GACT,SAAS,GACT,UAAU,GACV,UAAU,GACV,QAAQ,GACR,SAAS,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,MAAM,oBAAoB,GAAG,UAAU,GAAG;IAC9C,iBAAiB,EAAE,yBAAyB,EAAE,CAAC;CAChD,CAAC;AAiFF,wBAAgB,cAAc,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAW5D;AAiqBD,wBAAsB,eAAe,CACnC,IAAI,EAAE,QAAQ,EACd,QAAQ,EAAE,QAAQ,EAClB,YAAY,EAAE,MAAM,EACpB,YAAY,GAAE,2BAAoE,GACjF,OAAO,CAAC,oBAAoB,CAAC,CA+J/B"}
+{"version":3,"file":"execute-plan.d.ts","sourceRoot":"","sources":["../../src/engine/execute-plan.ts"],"names":[],"mappings":"AAGA,OAAO,EACL,aAAa,EAGb,gCAAgC,EAEhC,sBAAsB,EACtB,kCAAkC,EAGnC,MAAM,QAAQ,CAAC;AAEhB,OAAO,EAAE,YAAY,IAAI,eAAe,EAAE,MAAM,mBAAmB,CAAC;AACpE,OAAO,KAAK,EACV,QAAQ,EAGT,MAAM,0BAA0B,CAAC;AAElC,OAAO,EAGL,uBAAuB,EACxB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,wBAAwB,EAExB,QAAQ,EAER,UAAU,EACX,MAAM,gBAAgB,CAAC;AAIxB,UAAU,2BAA2B;IACnC,mBAAmB,CAAC,EAAE,MAAM,OAAO,CAAC,IAAI,CAAC,CAAC;IAC1C,YAAY,CAAC,EAAE,OAAO,eAAe,CAAC;IACtC,aAAa,CAAC,EAAE,OAAO,aAAa,CAAC;IACrC,sBAAsB,CAAC,EAAE,OAAO,sBAAsB,CAAC;IACvD,gCAAgC,CAAC,EAAE,OAAO,gCAAgC,CAAC;IAC3E,kCAAkC,CAAC,EAAE,OAAO,kCAAkC,CAAC;IAC/E,uBAAuB,CAAC,EAAE,OAAO,uBAAuB,CAAC;CAC1D;AAID,MAAM,WAAW,yBAAyB;IACxC,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,wBAAwB,CAAC,aAAa,CAAC,CAAC;IACrD,MAAM,EAAE,wBAAwB,CAAC,QAAQ,CAAC,CAAC;IAC3C,SAAS,EAAE,wBAAwB,CAAC,WAAW,CAAC,CAAC;IACjD,MAAM,EACF,SAAS,GACT,SAAS,GACT,UAAU,GACV,UAAU,GACV,QAAQ,GACR,SAAS,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,MAAM,oBAAoB,GAAG,UAAU,GAAG;IAC9C,iBAAiB,EAAE,yBAAyB,EAAE,CAAC;CAChD,CAAC;AAiFF,wBAAgB,cAAc,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAW5D;AAoqBD,wBAAsB,eAAe,CACnC,IAAI,EAAE,QAAQ,EACd,QAAQ,EAAE,QAAQ,EAClB,YAAY,EAAE,MAAM,EACpB,YAAY,GAAE,2BAAoE,GACjF,OAAO,CAAC,oBAAoB,CAAC,CAkK/B"}

package/dist/engine/execute-plan.js

@@ -377,6 +377,9 @@ async function executeCollectionTransaction(plans, manifest, blockedDeferredDire
             removedTransitionPlans.size > 0 ||
             absentTransitionPlans.size > 0;
         if (hasManifestMutation) {
+            // Sync-covered save site: this path is reached only through sync's
+            // `executeSyncPlan`, which emits the pre-mutation version-restamp
+            // advisory before dispatching the plan. It needs no advisory of its own.
             await dependencies.saveManifest(manifestPath, nextManifest);
         }
         const detachmentResults = [];
@@ -582,6 +585,9 @@ export async function executeSyncPlan(plan, manifest, manifestPath, dependencies
     const entryApplySucceeded = operationResults.some(({ status }) => status === 'changed' || status === 'current');
     const successfulNoOperationApply = operations.length === 0 && !collectionTransaction.attempted;
     if (entryApplySucceeded || successfulNoOperationApply) {
+        // Sync-covered save site: see the collection save above. Sync owns the
+        // advisory because only the command layer knows the scope, the output
+        // ordering, and whether the run is in JSON mode.
         await saveManifest(manifestPath, nextManifest);
     }
     const collectionApplied = collectionTransaction.results.filter(({ status }) => status === 'changed').length;

package/dist/manifest/index.d.ts

@@ -1,5 +1,6 @@
 export { computeDirectoryHash } from './hash.js';
-export { addEntry, createEmptyManifest, findEntry, loadManifest, removeEntry, saveManifest, } from './manager.js';
+export { addEntry, createEmptyManifest, detectManifestVersionRestamp, findEntry, formatManifestVersionRestampWarning, loadManifest, removeEntry, saveManifest, } from './manager.js';
+export type { ManifestVersionRestamp } from './manager.js';
 export type { Manifest, ManifestCollectionEntry, ManifestEntry, ManifestEntryV2, ManifestV1, ManifestV2, } from './manifest.types.js';
 export { ManifestCollectionEntrySchema, ManifestEntrySchema, ManifestSchema, ManifestV1Schema, ManifestV2Schema, } from './manifest.types.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/manifest/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/manifest/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,oBAAoB,EAAE,MAAM,QAAQ,CAAC;AAC9C,OAAO,EACL,QAAQ,EACR,mBAAmB,EACnB,SAAS,EACT,YAAY,EACZ,WAAW,EACX,YAAY,GACb,MAAM,WAAW,CAAC;AACnB,YAAY,EACV,QAAQ,EACR,uBAAuB,EACvB,aAAa,EACb,eAAe,EACf,UAAU,EACV,UAAU,GACX,MAAM,kBAAkB,CAAC;AAC1B,OAAO,EACL,6BAA6B,EAC7B,mBAAmB,EACnB,cAAc,EACd,gBAAgB,EAChB,gBAAgB,GACjB,MAAM,kBAAkB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/manifest/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,oBAAoB,EAAE,MAAM,QAAQ,CAAC;AAC9C,OAAO,EACL,QAAQ,EACR,mBAAmB,EACnB,4BAA4B,EAC5B,SAAS,EACT,mCAAmC,EACnC,YAAY,EACZ,WAAW,EACX,YAAY,GACb,MAAM,WAAW,CAAC;AACnB,YAAY,EAAE,sBAAsB,EAAE,MAAM,WAAW,CAAC;AACxD,YAAY,EACV,QAAQ,EACR,uBAAuB,EACvB,aAAa,EACb,eAAe,EACf,UAAU,EACV,UAAU,GACX,MAAM,kBAAkB,CAAC;AAC1B,OAAO,EACL,6BAA6B,EAC7B,mBAAmB,EACnB,cAAc,EACd,gBAAgB,EAChB,gBAAgB,GACjB,MAAM,kBAAkB,CAAC"}

package/dist/manifest/index.js

@@ -1,3 +1,3 @@
 export { computeDirectoryHash } from './hash.js';
-export { addEntry, createEmptyManifest, findEntry, loadManifest, removeEntry, saveManifest, } from './manager.js';
+export { addEntry, createEmptyManifest, detectManifestVersionRestamp, findEntry, formatManifestVersionRestampWarning, loadManifest, removeEntry, saveManifest, } from './manager.js';
 export { ManifestCollectionEntrySchema, ManifestEntrySchema, ManifestSchema, ManifestV1Schema, ManifestV2Schema, } from './manifest.types.js';

package/dist/manifest/manager.d.ts

@@ -1,5 +1,45 @@
 import { type Manifest, type ManifestEntry, type ManifestV2 } from './manifest.types.js';
 export declare function createEmptyManifest(): Manifest;
+/**
+ * Structured evidence that the CLI version recorded in a manifest differs from
+ * the CLI version that is about to rewrite it.
+ *
+ * `saveManifest` unconditionally replaces `oatVersion` with `OAT_VERSION`, so
+ * this is the only record of the producing version once a save has happened.
+ * Commands compute it from the pre-mutation manifest and report it *before*
+ * their save, which is why it is a value rather than an output side effect.
+ */
+export interface ManifestVersionRestamp<TScope extends string = string> {
+    scope: TScope;
+    producingVersion: string;
+    invokingVersion: string;
+}
+/**
+ * Derive the advisory restamp diagnostic for a loaded scope manifest.
+ *
+ * This is the single comparison used by every command that saves a manifest,
+ * so the semantics cannot drift between call sites. Comparison is plain string
+ * inequality on identity, never semantic-version ordering: "different" is the
+ * contract, not "older" or "newer".
+ *
+ * Only `oatVersion` is reported. The silent V1 -> V2 `version` upgrade that
+ * `loadManifest` performs in memory is deliberately out of scope for this
+ * advisory: it is a schema migration rather than a loss of producer evidence.
+ *
+ * An absent manifest never reports a restamp, because `loadManifest` returns an
+ * empty manifest already stamped with the invoking version and the two strings
+ * match. Invalid manifests never reach here at all; the loader and schema keep
+ * their existing fail-closed behavior.
+ */
+export declare function detectManifestVersionRestamp<TScope extends string>(scope: TScope, manifest: Pick<ManifestV2, 'oatVersion'>): ManifestVersionRestamp<TScope> | undefined;
+/**
+ * Render the human advisory for a restamp diagnostic.
+ *
+ * Formatting is shared so the message stays identical across commands, but
+ * *emitting* it stays with each command: only the command knows its output
+ * ordering and whether the run is in JSON mode.
+ */
+export declare function formatManifestVersionRestampWarning(command: string, restamp: ManifestVersionRestamp): string;
 export declare function loadManifest(manifestPath: string): Promise<Manifest>;
 export declare function saveManifest(manifestPath: string, manifest: ManifestV2): Promise<void>;
 export declare function findEntry(manifest: Manifest, canonicalPath: string, provider: string): ManifestEntry | undefined;

package/dist/manifest/manager.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"manager.d.ts","sourceRoot":"","sources":["../../src/manifest/manager.ts"],"names":[],"mappings":"AAOA,OAAO,EACL,KAAK,QAAQ,EACb,KAAK,aAAa,EAClB,KAAK,UAAU,EAGhB,MAAM,kBAAkB,CAAC;AAa1B,wBAAgB,mBAAmB,IAAI,QAAQ,CAQ9C;AAED,wBAAsB,YAAY,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAAC,QAAQ,CAAC,CAmE1E;AAED,wBAAsB,YAAY,CAChC,YAAY,EAAE,MAAM,EACpB,QAAQ,EAAE,UAAU,GACnB,OAAO,CAAC,IAAI,CAAC,CAWf;AAED,wBAAgB,SAAS,CACvB,QAAQ,EAAE,QAAQ,EAClB,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,aAAa,GAAG,SAAS,CAK3B;AAED,wBAAgB,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,KAAK,EAAE,aAAa,GAAG,QAAQ,CAc3E;AAED,wBAAgB,WAAW,CACzB,QAAQ,EAAE,QAAQ,EAClB,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,QAAQ,CAeV"}
+{"version":3,"file":"manager.d.ts","sourceRoot":"","sources":["../../src/manifest/manager.ts"],"names":[],"mappings":"AAOA,OAAO,EACL,KAAK,QAAQ,EACb,KAAK,aAAa,EAClB,KAAK,UAAU,EAGhB,MAAM,kBAAkB,CAAC;AAa1B,wBAAgB,mBAAmB,IAAI,QAAQ,CAQ9C;AAED;;;;;;;;GAQG;AACH,MAAM,WAAW,sBAAsB,CAAC,MAAM,SAAS,MAAM,GAAG,MAAM;IACpE,KAAK,EAAE,MAAM,CAAC;IACd,gBAAgB,EAAE,MAAM,CAAC;IACzB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAgB,4BAA4B,CAAC,MAAM,SAAS,MAAM,EAChE,KAAK,EAAE,MAAM,EACb,QAAQ,EAAE,IAAI,CAAC,UAAU,EAAE,YAAY,CAAC,GACvC,sBAAsB,CAAC,MAAM,CAAC,GAAG,SAAS,CAS5C;AAED;;;;;;GAMG;AACH,wBAAgB,mCAAmC,CACjD,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,sBAAsB,GAC9B,MAAM,CAER;AAED,wBAAsB,YAAY,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAAC,QAAQ,CAAC,CAmE1E;AAED,wBAAsB,YAAY,CAChC,YAAY,EAAE,MAAM,EACpB,QAAQ,EAAE,UAAU,GACnB,OAAO,CAAC,IAAI,CAAC,CAWf;AAED,wBAAgB,SAAS,CACvB,QAAQ,EAAE,QAAQ,EAClB,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,aAAa,GAAG,SAAS,CAK3B;AAED,wBAAgB,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,KAAK,EAAE,aAAa,GAAG,QAAQ,CAc3E;AAED,wBAAgB,WAAW,CACzB,QAAQ,EAAE,QAAQ,EAClB,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,QAAQ,CAeV"}

package/dist/manifest/manager.js

@@ -22,6 +22,41 @@ export function createEmptyManifest() {
         lastUpdated: nowIso(),
     };
 }
+/**
+ * Derive the advisory restamp diagnostic for a loaded scope manifest.
+ *
+ * This is the single comparison used by every command that saves a manifest,
+ * so the semantics cannot drift between call sites. Comparison is plain string
+ * inequality on identity, never semantic-version ordering: "different" is the
+ * contract, not "older" or "newer".
+ *
+ * Only `oatVersion` is reported. The silent V1 -> V2 `version` upgrade that
+ * `loadManifest` performs in memory is deliberately out of scope for this
+ * advisory: it is a schema migration rather than a loss of producer evidence.
+ *
+ * An absent manifest never reports a restamp, because `loadManifest` returns an
+ * empty manifest already stamped with the invoking version and the two strings
+ * match. Invalid manifests never reach here at all; the loader and schema keep
+ * their existing fail-closed behavior.
+ */
+export function detectManifestVersionRestamp(scope, manifest) {
+    const producingVersion = manifest.oatVersion;
+    const invokingVersion = OAT_VERSION;
+    if (producingVersion === invokingVersion) {
+        return undefined;
+    }
+    return { scope, producingVersion, invokingVersion };
+}
+/**
+ * Render the human advisory for a restamp diagnostic.
+ *
+ * Formatting is shared so the message stays identical across commands, but
+ * *emitting* it stays with each command: only the command knows its output
+ * ordering and whether the run is in JSON mode.
+ */
+export function formatManifestVersionRestampWarning(command, restamp) {
+    return `Manifest version restamp [${command} ${restamp.scope}]: manifest produced by oat "${restamp.producingVersion}" will be restamped to oat "${restamp.invokingVersion}".`;
+}
 export async function loadManifest(manifestPath) {
     try {
         const raw = await readFile(manifestPath, 'utf8');

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@open-agent-toolkit/cli",
-  "version": "0.2.57",
+  "version": "0.2.59",
   "private": false,
   "description": "Open Agent Toolkit CLI",
   "homepage": "https://github.com/voxmedia/open-agent-toolkit/tree/main/packages/cli",
@@ -34,7 +34,7 @@
     "ora": "^9.0.0",
     "yaml": "2.8.2",
     "zod": "^3.25.76",
-    "@open-agent-toolkit/control-plane": "0.2.57"
+    "@open-agent-toolkit/control-plane": "0.2.59"
   },
   "devDependencies": {
     "@types/node": "^22.10.0",