@oomkapwn/enquire-mcp 3.5.13 → 3.6.0-rc.1

package/CHANGELOG.md

@@ -2,8 +2,106 @@
 
 All notable changes to this project will be documented here. The format follows [Keep a Changelog](https://keepachangelog.com/en/1.1.0/), and the project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [3.6.0-rc.1] — 2026-05-15
+
+> **TL;DR:** v3.6.0 Phase 1 of 4 — `src/tools.ts` (4252 lines) split into 5 domain modules under `src/tools/` with a barrel re-export. Pure refactor: same exported surface, same signatures, all 712 tests pass. Published to npm under dist-tag `rc` (NOT `latest`); install with `npm i @oomkapwn/enquire-mcp@rc` to try.
+
+**Pre-release — v3.6.0 sprint Phase 1.** First RC of the v3.6.0 minor release. The sprint goal (`CLAUDE.md` in repo root) is split into 4 phased RCs + stable promotion; each RC is independently testable on the `rc` dist-tag before the final `latest` promotion.
+
+### Changed — `src/tools.ts` (4252 lines) → `src/tools/` (5 domain files + barrel)
+
+The monolith `tools.ts` was the **#1 finding across 3 independent external audits** (Mavis ×2, MiniMax) — every audit flagged it as the only blocker between the project and a clean top-tier rating. This RC closes it.
+
+| Domain | File | Lines | Exports | What's inside |
+|---|---|---|---|---|
+| Search | `src/tools/search.ts` | 1224 | 19 | `searchText`, `semanticSearch`, `embeddingsSearch`, `searchHybrid`, `findSimilar`, `pickEmbedTextForHyde` + TF-IDF helpers (`tokenizeForTfidf`, `buildTfidfIndex`, `sliceSnippet`) + types (`SearchMode`, `SearchHit`, `SearchResponse`, `SemanticHit`, `EmbedHit`, `EmbedSearchResponse`, `HnswSearchContext`, `SimilarNote`, `SearchHybridHit`, `SearchHybridResponse`) |
+| Write | `src/tools/write.ts` | 682 | 21 | `createNote`, `appendToNote`, `renameNote`, `archiveNote`, `replaceInNotes`, `frontmatterSet` + helpers (`rewriteRawTarget`, `rewriteOutsideCodeFences`, `replaceStringOutsideCodeFences`, `composeNote`, `suggestSimilar`, `resolveTarget`, `extractFrontmatterTagsLower`, `resolvePeriodicAlias`) + types |
+| Read | `src/tools/read.ts` | 864 | 28 | `listNotes`, `readNote`, `getRecentEdits`, `listTags`, `getVaultStats`, `resolveWikilink`, `getBacklinks`, `getUnresolvedWikilinks`, `getOutboundLinks`, `getNoteNeighbors`, `frontmatterGet`, `frontmatterSearch`, `dataviewQuery`, `chatThreadRead`, `chatThreadAppend` + helpers (`extractHeadings`) + types |
+| Media | `src/tools/media.ts` | 516 | 16 | `listPdfs`, `readPdf`, `ocrPdf`, `listCanvases`, `readCanvas` + types |
+| Meta | `src/tools/meta.ts` | 984 | 26 | `contextPack`, `validateNoteProposal`, `lintWiki`, `getOpenQuestions`, `paperAudit`, `findPath`, `openInUi` + helpers (`jaccard`, `intersectionSize`, `ngrams`, `indexFor`, `findBestMatch`, `stripMd`, `normalizeTag`) + types |
+| Barrel | `src/tools/index.ts` | 5 | re-export | `export * from "./search.js"; ...` |
+| **Total** | **6 files** | **4275** | **110** | (+23 lines: previously-private helpers became `export` for cross-domain use) |
+
+### Changed — import paths
+
+- `src/index.ts`: `from "./tools.js"` → `from "./tools/index.js"`
+- `src/eval.ts`: same
+- 15 test files updated identically. Pure path swap, no API changes.
+
+### Helper visibility — what changed and why
+
+A handful of previously-private helpers became exported so cross-domain functions can share them via ES module imports. Each is benign (used only inside async function bodies, no runtime cycles). The barrel re-exports them transparently. List in commit message + below for traceability:
+
+- `meta.ts` exports (new): `jaccard`, `intersectionSize`, `ngrams`, `indexFor`, `findBestMatch`, `stripMd`, `normalizeTag`
+- `search.ts` exports (new): `sliceSnippet`, `tokenizeForTfidf`, `buildTfidfIndex`
+- `write.ts` exports (new): `composeNote`, `extractFrontmatterTagsLower`, `resolvePeriodicAlias`, `suggestSimilar`, `resolveTarget`, `rewriteRawTarget`, `rewriteOutsideCodeFences`, `replaceStringOutsideCodeFences`
+
+These now appear in the public barrel surface. They are NOT part of `package.json` `exports` (which only re-exports `embed-db`, `fts5`, `vault`, `hnsw`, `bases`, `communities`) — so no SemVer contract change. STABILITY.md surface unaffected.
+
+### Migration
+
+**No-op for consumers.** The npm package's public API surface (44 MCP tools, CLI flags, exported sub-paths) is identical. The refactor is purely internal file structure.
+
+For contributors who imported from `src/tools.ts` directly:
+- Old: `import { createNote } from "@oomkapwn/enquire-mcp/dist/tools.js"`
+- New: `import { createNote } from "@oomkapwn/enquire-mcp/dist/tools/index.js"`
+
+But `src/tools.ts` was never in `package.json` `exports`, so this import path was never officially supported. No breakage on supported paths.
+
+### Tests
+
+712 unit tests pass · 31 test files · branches 75.29% · lines 89.54% · statements 86.06% · functions 82.15% · lint clean · `tsc` strict clean · smoke pass (synthetic vault scan + FTS5 path + bearer auth).
+
+### npm dist-tag
+
+Published under **`rc`** dist-tag, NOT `latest`. Users on `latest` stay on v3.5.14. To try this RC: `npm install @oomkapwn/enquire-mcp@rc`.
+
+### Next RC
+
+`v3.6.0-rc.2`: split `src/index.ts` (3665 lines) → `src/cli/*` + `src/server.ts` + `src/prompts.ts` + `src/tool-registry.ts` + machine-readable `src/tool-manifest.ts`.
+
+## [3.5.14] — 2026-05-14
+
+> **TL;DR:** External audit #5 (MiniMax, 4.7/5.0). Surface-only cleanup: added TL;DR headers to v3.5.9..v3.5.13 entries for skimability + documented the rejected L-2 finding (deps dual-listing is needed, not cosmetic). No code changes.
+
+**Patch — external audit #5 followup (MiniMax, v3.5.13).**
+
+Third independent audit in 4 days. Verdict: **4.7/5.0**, production-ready, only major concern is the monolith files already in v3.6 roadmap. Two reviewer recommendations actioned this release, one rejected with documented reasoning.
+
+### Added — TL;DR headers on recent CHANGELOG entries (audit M-1, partial)
+
+Auditor recommended simplifying the CHANGELOG (~1000 lines on 13 patches felt overweight). Full simplification rejected — the detail is **audit trail**, not noise: v3.5.10's coverage-stats drift was only catchable BECAUSE we had the original (wrong) numbers vs the (right) retroactive correction in the same file. Compromise: every recent entry now has a one-blockquote **TL;DR** at the top so skim-readers can grok scope in 1 second, while the full detail stays available for the next maintainer / next audit.
+
+Pattern applied to v3.5.9, v3.5.10, v3.5.11, v3.5.12, v3.5.13 — plus this entry. Future patches will follow the same convention.
+
+### Rejected — auditor L-2 (`@huggingface/transformers` deps dual-listing)
+
+Auditor flagged `@huggingface/transformers ^4.2.0` appearing in BOTH `devDependencies` and `optionalDependencies` as "cosmetic". **Tested the removal locally: 13 test failures** (cold-import timeouts in `pdf.test.ts` + `ocr.test.ts` + flake spreading across the test matrix when 31 test files run in parallel and each one's setup.ts cold-imports the 100MB transformers package).
+
+The dual-listing isn't cosmetic — it's the v3.5.6 root-cause fix for cold-import flakes. `optionalDependencies` alone is enough for npm to install the package, but listing in `devDependencies` ensures the dependency resolver hoists / caches it more aggressively, which keeps `tests/setup.ts`'s `Promise.allSettled([...])` warm-load reliable under the parallel test matrix. Empirical: with dual-listing 712/712 pass; without it 699/712 pass (4 test files fail with timeouts).
+
+Documented inline (this CHANGELOG entry) so future audits see the prior-art rejection and don't re-flag.
+
+### Deferred — auditor M-2 (JSDoc for public API)
+
+Adding TSDoc to 44 tools + 19 prompts is ~1300 lines of doc-comments. Worth doing but doesn't fit a patch — folded into the v3.6 sprint along with the monolith refactor.
+
+### Tests
+
+712 unit tests pass · branches 75.29% · lines 89.54% · statements 86.07% · functions 82.15% (verified via `npm run test:coverage`). Lint clean · tsc clean · version-consistency green at `3.5.14` across 5 surfaces.
+
+### Migration
+
+**No-op.** Documentation-only patch.
+
+### Method note
+
+This is a deliberate "no-op patch" against auditor findings: only the cheap actionable items get applied, the recommendations that turn out to be wrong on closer inspection get **documented rejections** in the CHANGELOG (not silently ignored). The next audit cycle sees the rejection trail and either accepts it or escalates with a stronger argument — avoiding the cycle of "auditor flags X → maintainer dismisses → next auditor flags X again".
+
 ## [3.5.13] — 2026-05-13
 
+> **TL;DR:** README badges + `#trust` table stale CI claims (8→7 required gates, Node 22/24 matrix, branches ≥74%).
+
 **Patch — README badges + stale CI claims.** Surface-only cleanup. No code changes.
 
 ### Fixed
@@ -28,6 +126,8 @@ This is exactly the class of drift the v3.5.9 docs-consistency invariants were d
 
 ## [3.5.12] — 2026-05-13
 
+> **TL;DR:** Audit #4 followup — class fixes for `serve`/`serve-http` help drift (shared `cli-help.ts` module) + CHANGELOG coverage stat drift (new gate script in CI). 4 instance fixes (broken link, retroactive coverage numbers, biome schema bump, cosmetic version).
+
 **Patch — external audit #4 followup.** External re-audit measured v3.5.10 on disk and surfaced 5 LOW/INFO/COSMETIC findings (§3 of [REAUDIT_REPORT_v3.5.10]). Closes all 5 + applies root-cause-sweep methodology so the next audit doesn't find the same drift class again.
 
 ### Added — `src/cli-help.ts` (class fix for §3.1)
@@ -86,6 +186,8 @@ This closes the second class of bug the methodology was designed to prevent: num
 
 ## [3.5.11] — 2026-05-13
 
+> **TL;DR:** `pdfjs-dist` upgraded v4 → v5 (closes dependabot #54 that hung 2 days on CI red). 3 breaking API changes patched. CI matrix drops Node 20 (pdfjs v5 needs ≥22.13, Node 20 EOL'd 2026-04). Engines `>=20` UNCHANGED for non-PDF users on prebuilt dist.
+
 **Patch — pdfjs-dist v4 → v5 migration + CI Node 20 drop.** Dependabot PR #54 had been hanging since 2026-05-11 with CI red across every job. The bump itself was 1 line in `package.json`, but pdfjs v5 has 3 breaking API changes that needed code-side fixes, AND v5.7+ requires `engines: >=22.13.0`. This release ships the bump + migration + CI matrix update together.
 
 ### Changed
@@ -123,6 +225,8 @@ This closes the second class of bug the methodology was designed to prevent: num
 
 ## [3.5.10] — 2026-05-13
 
+> **TL;DR:** Audit #3 §3-5 followup — new `docs/COMPARISON.md` (honest matrix vs 4 alternatives) + `docs/QUICKSTART.md` (5-min happy path) + 14 missing tool sections in `docs/api.md` (now 44/44 documented) + branch coverage uplift 72.94% → 75.29% via 40 targeted tests.
+
 **Patch — external audit #3 followup.** v3.5.9 closed §2 of the audit (docs drift class fix). This release tackles §3-4: onboarding clarity, alternative comparison, api.md completeness, and the v3.6 commitment from v3.5.9 to lift branch coverage back above 75%.
 
 ### Added
@@ -152,6 +256,8 @@ v3.5.9 fixed §2 of audit #3 in one release. This release fixes §3-4 in one rel
 
 ## [3.5.9] — 2026-05-13
 
+> **TL;DR:** Audit #3 §2 class fix — 5 new docs-consistency invariants (README test count, package.json description, social-preview.svg, api.md tool counts, write-tool count word) + 6 instance drift fixes (D1-D6). Class fix, not symptom fix: next audit can't find the same bug class in 0 new surfaces.
+
 **Patch — external audit #3: class fix for numeric/feature drift across 8 surfaces.** v3.5.1 invariants caught drift in README + STABILITY.md tool counts. The same drift recurred in **6 OTHER surfaces** the invariants didn't cover. This release closes the class, not just the instances.
 
 ### Fixed — 6 instance drift cases (D1-D6 from external audit)

package/dist/eval.js

@@ -34,7 +34,7 @@
 // adjust graph_boost / reranker / min_signals based on real numbers
 // over their real corpus.
 import { promises as fs } from "node:fs";
-import { searchHybrid } from "./tools.js";
+import { searchHybrid } from "./tools/index.js";
 /**
  * NDCG@K with binary relevance.
  *

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package/dist/index.js

@@ -10,10 +10,10 @@ import { DIAGNOSTIC_SEARCH_TOOLS_HELP, ENABLE_WRITE_HELP, PERSISTENT_INDEX_HELP
 import { EmbedDb } from "./embed-db.js";
 import { DEFAULT_MODEL_ALIAS, EMBEDDING_MODELS, loadEmbedder, resolveModel } from "./embeddings.js";
 import { chunkContent, defaultIndexFile, FtsIndex } from "./fts5.js";
-import { appendToNote, archiveNote, chatThreadAppend, chatThreadRead, contextPack, createNote, dataviewQuery, embeddingsSearch, findPath, findSimilar, frontmatterGet, frontmatterSearch, frontmatterSet, getBacklinks, getNoteNeighbors, getOpenQuestions, getOutboundLinks, getRecentEdits, getUnresolvedWikilinks, getVaultStats, lintWiki, listCanvases, listNotes, listPdfs, listTags, ocrPdf, openInUi, paperAudit, readCanvas, readNote, readPdf, renameNote, replaceInNotes, resolveWikilink, searchHybrid, searchText, semanticSearch, validateNoteProposal } from "./tools.js";
+import { appendToNote, archiveNote, chatThreadAppend, chatThreadRead, contextPack, createNote, dataviewQuery, embeddingsSearch, findPath, findSimilar, frontmatterGet, frontmatterSearch, frontmatterSet, getBacklinks, getNoteNeighbors, getOpenQuestions, getOutboundLinks, getRecentEdits, getUnresolvedWikilinks, getVaultStats, lintWiki, listCanvases, listNotes, listPdfs, listTags, ocrPdf, openInUi, paperAudit, readCanvas, readNote, readPdf, renameNote, replaceInNotes, resolveWikilink, searchHybrid, searchText, semanticSearch, validateNoteProposal } from "./tools/index.js";
 import { Vault } from "./vault.js";
 import { VaultWatcher } from "./watcher.js";
-const VERSION = "3.5.13";
+const VERSION = "3.6.0-rc.1";
 /** Default location for the persistent embedding index, alongside .fts5.db. */
 function embedDbPath(vaultRoot) {
     // Match the FTS5 location convention by stripping the .fts5.db extension