@onebrain-ai/cli 2.1.16 → 2.2.0

package/README.md

@@ -198,7 +198,7 @@ OneBrain has automatic behaviors that run without you doing anything:
 
 **The practical result:** Just say "bye" and everything is saved. If the session ends unexpectedly, you lose at most 15 messages — the last checkpoint recovers the rest.
 
-> Auto Checkpoint requires Claude Code (uses the Claude Code stop hook) and the `onebrain` CLI binary. Install with `npm install -g @onebrain-ai/cli`. Auto Session Summary works with any agent that follows INSTRUCTIONS.md.
+> Auto Checkpoint runs on Claude Code (`Stop` hook) and Gemini CLI (`AfterAgent` hook), and uses the `onebrain` CLI binary. Install with `npm install -g @onebrain-ai/cli`. Auto Session Summary works with any agent that follows INSTRUCTIONS.md.
 
 ---
 
@@ -214,7 +214,7 @@ OneBrain doesn't just store markdown. Every feature exists to make you and the a
 | 📂 | **Vault-native Markdown** | Plain Markdown, no lock-in. Your data stays yours forever |
 | 🔀 | **Multi-Harness OS** | Switch between Claude Code, Gemini CLI, Codex, Qwen, or BYO LLM — context never breaks. [See architecture ↑](#the-harness-os-architecture) |
 | 🔌 | **Zero Config** | Clone, open in Obsidian, run `/onboarding`. Ready in under 2 minutes |
-| 📓 | **Session Logs & Checkpoints** | Every conversation saved with summaries and action items. Auto-checkpoints fire every 15 messages or 30 min so nothing is lost mid-session *(auto-checkpoint requires Claude Code)* |
+| 📓 | **Session Logs & Checkpoints** | Every conversation saved with summaries and action items. Auto-checkpoints fire every 15 messages or 30 min so nothing is lost mid-session *(supported on Claude Code and Gemini CLI)* |
 | 💾 | **Auto Session Summary** | When you say "bye", the agent silently saves a complete session log — no `/wrapup` needed |
 | 🔗 | **Knowledge Synthesis** | `/consolidate` turns inbox captures into permanent connected knowledge |
 | 🔬 | **Confidence-scored Memory** | Every insight carries `[conf:high/medium/low]` + `[verified:YYYY-MM-DD]` — knowledge that grows more reliable with use |
@@ -276,7 +276,7 @@ Each harness reads OneBrain's instruction file automatically. Install it, run it
 | **OpenAI Codex** | `npm install -g @openai/codex` | `codex` | `AGENTS.md` |
 | **Qwen Code** | `npm install -g @qwen-code/qwen-code` | `qwen` | `AGENTS.md` |
 
-> Auto-checkpoint and the Stop hook are wired up for Claude Code today. The other harnesses get the rest of the skill surface (24+ commands) immediately, and gain hook coverage as upstream support lands.
+> Auto-checkpoint and stop-hook coverage ship for Claude Code (`Stop` + optional `PostToolUse` qmd) and Gemini CLI (`AfterAgent` + optional `AfterTool` qmd) out of the box. Slash commands are namespaced on Gemini (`/onebrain:braindump`) to avoid collisions with built-ins; on Claude they invoke directly (`/braindump`). Other harnesses gain hook coverage as upstream support lands.
 
 ### 1. Install the OneBrain CLI
 
@@ -342,7 +342,7 @@ Same vault. Same skills. Same memory. The LLM swaps; OneBrain doesn't notice.
 
 ## 📋 24+ Commands
 
-The full skill surface, alphabetized by workflow.
+The full skill surface, alphabetized by workflow. **Gemini CLI users:** prepend the `onebrain:` namespace, e.g. `/onebrain:braindump` instead of `/braindump` (avoids collisions with Gemini built-in commands like `/help` and `/tasks`).
 
 | Command | What it does |
 |---------|-------------|
@@ -402,7 +402,8 @@ onebrain/
 ├── GEMINI.md          Instructions for Gemini CLI
 ├── AGENTS.md          Universal agent instructions
 ├── vault.yml          Your vault configuration (created during onboarding)
-└── .claude/plugins/   AI skills and hooks
+├── .claude/plugins/   AI skills, hooks, and shared INSTRUCTIONS (read by Claude Code)
+└── .gemini/           Gemini CLI project config — hooks + namespaced slash commands
 ```
 
 The core workflow: capture everything to inbox → process with `/consolidate` → synthesize into knowledge or save as reference → archive what's done.

package/dist/onebrain

@@ -9558,7 +9558,7 @@ var init_lib = __esm(() => {
 var require_package = __commonJS((exports, module) => {
   module.exports = {
     name: "@onebrain-ai/cli",
-    version: "2.1.16",
+    version: "2.2.0",
     description: "CLI for OneBrain \u2014 personal AI OS for Obsidian with persistent memory, 24+ skills, and Claude Code integration",
     keywords: [
       "onebrain",
@@ -10205,20 +10205,6 @@ function applyPermissions(settings) {
   }
   return added;
 }
-async function registerGeminiHooks(vaultRoot) {
-  const geminiSettingsPath = join4(vaultRoot, ".gemini", "settings.json");
-  try {
-    const text = await readFile(geminiSettingsPath, "utf8");
-    const settings = JSON.parse(text);
-    applyHooks(settings);
-    await writeSettings(geminiSettingsPath, settings);
-  } catch (err) {
-    if (err.code !== "ENOENT") {
-      process.stderr.write(`register-hooks: gemini warning: ${err instanceof Error ? err.message : String(err)}
-`);
-    }
-  }
-}
 async function registerDirectPath() {
   const home = homedir();
   const candidates = [join4(home, ".zshrc"), join4(home, ".bashrc"), join4(home, ".profile")];
@@ -10316,9 +10302,6 @@ async function runRegisterHooks(opts = {}) {
       if (!isTTY)
         note("permissions ok");
     }
-    if (harness === "gemini") {
-      await registerGeminiHooks(vaultRoot);
-    }
     if (harness === "direct") {
       await registerDirectPath();
     }
@@ -10495,6 +10478,43 @@ async function syncPluginFiles(extractedDir, vaultRoot, unlinkFn = unlink2) {
   }
   return { filesAdded, filesRemoved };
 }
+async function syncGeminiConfig(extractedDir, vaultRoot, unlinkFn = unlink2) {
+  const sourceGemini = join5(extractedDir, ".gemini");
+  const destGemini = join5(vaultRoot, ".gemini");
+  try {
+    await stat4(sourceGemini);
+  } catch {
+    return { filesAdded: 0, filesRemoved: 0 };
+  }
+  await mkdirIdempotent(destGemini);
+  const sourceFiles = await listFilesRecursive(sourceGemini);
+  const sourceRelSet = new Set(sourceFiles.map((f2) => relative(sourceGemini, f2)));
+  const destFiles = await listFilesRecursive(destGemini);
+  const destRelSet = new Set(destFiles.map((f2) => relative(destGemini, f2)));
+  const staleRels = [];
+  for (const rel of destRelSet) {
+    if (!sourceRelSet.has(rel))
+      staleRels.push(rel);
+  }
+  let filesAdded = 0;
+  for (const srcPath of sourceFiles) {
+    const rel = relative(sourceGemini, srcPath);
+    const destPath = join5(destGemini, rel);
+    await mkdirIdempotent(dirname2(destPath));
+    const content = await readFile2(srcPath);
+    await writeFile3(destPath, content);
+    filesAdded++;
+  }
+  let filesRemoved = 0;
+  for (const rel of staleRels) {
+    const destPath = join5(destGemini, rel);
+    try {
+      await unlinkFn(destPath);
+      filesRemoved++;
+    } catch {}
+  }
+  return { filesAdded, filesRemoved };
+}
 async function copyRootDocs(extractedDir, vaultRoot) {
   const docs = ["CONTRIBUTING.md", "CHANGELOG.md", "PLUGIN-CHANGELOG.md"];
   for (const doc of docs) {
@@ -10821,9 +10841,10 @@ async function runVaultSync(vaultRoot, opts = {}) {
     stopSpinner(`onebrain-ai/onebrain@${branch} (v${result.version})`);
     startSpinner("\uD83D\uDCC2", "Syncing files");
     try {
-      const { filesAdded, filesRemoved } = await syncPluginFiles(extractedDir, vaultRoot, unlinkFn);
-      result.filesAdded = filesAdded;
-      result.filesRemoved = filesRemoved;
+      const pluginResult = await syncPluginFiles(extractedDir, vaultRoot, unlinkFn);
+      const geminiResult = await syncGeminiConfig(extractedDir, vaultRoot, unlinkFn);
+      result.filesAdded = pluginResult.filesAdded + geminiResult.filesAdded;
+      result.filesRemoved = pluginResult.filesRemoved + geminiResult.filesRemoved;
     } catch (err) {
       stopSpinner("plugin sync failed");
       const msg = err instanceof Error ? err.message : String(err);
@@ -10968,7 +10989,7 @@ var import_picocolors5 = __toESM(require_picocolors(), 1);
 var import_picocolors = __toESM(require_picocolors(), 1);
 function resolveBinaryVersion() {
   if (true)
-    return "2.1.16";
+    return "2.2.0";
   try {
     const pkg = require_package();
     return pkg.version ?? "dev";
@@ -13199,8 +13220,8 @@ function patchUtf8(stream) {
 }
 
 // src/index.ts
-var VERSION = "2.1.16";
-var RELEASE_DATE = "2026-05-06";
+var VERSION = "2.2.0";
+var RELEASE_DATE = "2026-05-07";
 patchUtf8(process.stdout);
 patchUtf8(process.stderr);
 var VERSION_STRING = `OneBrain v${VERSION} \u2014 released ${RELEASE_DATE}`;

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@onebrain-ai/cli",
-  "version": "2.1.16",
+  "version": "2.2.0",
   "description": "CLI for OneBrain — personal AI OS for Obsidian with persistent memory, 24+ skills, and Claude Code integration",
   "keywords": [
     "onebrain",