@oml/cli 0.13.0 → 0.14.1

package/README.md

@@ -1,6 +1,6 @@
 # OML CLI
 
-`@oml/cli` is the command-line interface for linting, compiling, reasoning over, rendering, and validating OML workspaces.
+`@oml/cli` is the command-line interface for linting, exporting, reasoning over, rendering, and validating OML workspaces.
 
 ## Package Layout
 
@@ -8,8 +8,7 @@
 - [bin/cli.js](./bin/cli.js) - executable entrypoint used by the published `oml` command
 - [src/main.ts](./src/main.ts) - TypeScript entrypoint
 - [src/cli.ts](./src/cli.ts) - command registration and top-level CLI wiring
-- [src/commands](./src/commands) - `lint`, `compile`, `reason`, `render`, and `validate` command implementations
-- [src/backend](./src/backend) - shared RDF/reasoning and markdown execution support
+- [src/commands](./src/commands) - `lint`, `export`, `reason`, `render`, `validate`, and `server` command implementations
 
 ## Instructions
 
@@ -36,18 +35,21 @@ The CLI uses the built-in production OML Platform endpoint by default. Set `OML_
 # Lint the current workspace
 node ./packages/cli/bin/cli.js lint
 
+# Start the standalone OML server on the default port (8080)
+node ./packages/cli/bin/cli.js server start
+
 # Lint against a local platform dev server
 OML_PLATFORM_API_URL=http://127.0.0.1:8787 \
 node ./packages/cli/bin/cli.js lint
 
-# Compile RDF output
-node ./packages/cli/bin/cli.js compile -w . -owl build/owl
+# Export RDF output with entailments
+node ./packages/cli/bin/cli.js export -o build/owl
 
-# Check consistency only
-node ./packages/cli/bin/cli.js reason -w . -owl build/owl --check-only
+# Run consistency reasoning (check-only)
+node ./packages/cli/bin/cli.js reason
 
 # Render markdown to static HTML
-node ./packages/cli/bin/cli.js render -w . -md src/md -web build/web -owl build/owl
+node ./packages/cli/bin/cli.js render -m src/md -b build/web
 ```
 
 ### Commands
@@ -58,16 +60,22 @@ node ./packages/cli/bin/cli.js render -w . -md src/md -web build/web -owl build/
   Removes the local sign-in session.
 - `whoami`
   Prints the current sign-in session.
-- `lint [-w <workspace>]`
+- `lint`
   Validates one file, or the current workspace when no file is given.
-- `compile [-w <workspace>] [-owl <dir>] [-f <ttl|trig|nt|nq|n3>] [--clean] [--only] [--pretty]`
-  Compiles OML to RDF.
-- `reason [-w <workspace>] [-owl <dir>] [-f <ttl|trig|nt|nq|n3>] [--clean] [--only] [--pretty] [--check-only] [-u <true|false>] [-e <true|false>] [-p <true|false>]`
-  Runs consistency checking and, unless `--check-only` is used, generates entailments.
-- `render [-w <workspace>] -md <dir> -web <dir> [-owl <dir>] [-f <ttl|trig|nt|nq|n3>] [-c <model-uri>] [--clean] [--only] [--pretty] [-u <true|false>] [-e <true|false>] [-p <true|false>]`
-  Runs the compile/reason pipeline, then renders markdown to static HTML.
-- `validate -md <dir> [-w <workspace>] [-owl <dir>] [-f <ttl|trig|nt|nq|n3>] [--clean] [--only] [--pretty] [-u <true|false>] [-e <true|false>] [-p <true|false>]`
-  Validates markdown table-editor SHACL blocks against their context models.
+- `export [-o|--owl <dir>] [-f <ttl|trig|nt|nq|n3>] [--clean] [--pretty] [--only]`
+  Exports OML to RDF and materializes entailments via `oml/reason`.
+- `reason [-e|--explanation <true|false>] [--only]`
+  Calls `/v0/reason` to run workspace consistency checks in check-only mode (no entailment materialization, no file persistence).
+- `render -m|--md <dir> -b|--web <dir> [-c|--context <ontology-iri>] [--only]`
+  Runs `lint`, then renders markdown files to static HTML.
+- `validate [--only]`
+  Validates table-editor SHACL blocks in workspace markdown files. Template markdown files (frontmatter `template`) are skipped as validation targets, while compose templates are still expanded for other markdown files. Runs `lint` first unless `--only` is provided.
+- `server start [port] [--port <port>] [--workspace <workspace>]`
+  Starts the standalone REST server daemon. When no port is provided, it uses `8080`.
+- `server stop`
+  Stops the standalone server daemon.
+- `server status`
+  Prints the standalone server daemon status.
 
 ### Notes
 
@@ -76,8 +84,7 @@ node ./packages/cli/bin/cli.js render -w . -md src/md -web build/web -owl build/
 - OAuth login refresh uses built-in Supabase defaults. Set `OML_SUPABASE_URL` or `OML_SUPABASE_ANON_KEY` to override them.
 - GitHub device-flow login requires `OML_AUTH_GITHUB_CLIENT_ID`, unless you embed `DEFAULT_GITHUB_CLIENT_ID` in [`src/auth.ts`](./src/auth.ts).
 - `oml login` exchanges the GitHub token with the platform at `OML_PLATFORM_API_URL` or the built-in default endpoint, then stores the platform session locally.
-- The CLI depends on `@oml/reasoner`.
-- `reason` runs ontology consistency checks in dependency order.
-- `render` runs the compile/reason pipeline unless `--only` is provided, then renders markdown, resolves `workspace:/` links, executes markdown blocks, and copies referenced non-markdown assets.
-- If the reasoner reports an inconsistent ontology, the CLI exits with code `1` and prints the raw JSON result returned by the reasoner.
+- `reason` runs `oml/reason` consistency checks per workspace model in check-only mode (no entailment files written).
+- `render` runs `lint` unless `--only` is provided, then renders markdown files to static HTML.
+- `server start` fails clearly when the requested host and port are already occupied.
 - When installed from npm, the CLI checks the npm registry for newer `@oml/cli` releases and prints `npm install -g @oml/cli@latest` when an update is available. Set `OML_NO_UPDATE_NOTIFIER=1` to disable the check.

package/out/{auth.d.ts → auth/auth.d.ts}

@@ -1,4 +1,9 @@
 type LoginOptions = {};
+export type OmlCliServerAuthSnapshot = {
+    accessToken: string;
+    refreshToken?: string;
+    expiresAtMs?: number;
+};
 export declare class OmlCliAuthService {
     login(options: LoginOptions): Promise<void>;
     logout(): Promise<void>;
@@ -6,6 +11,8 @@ export declare class OmlCliAuthService {
     ensureAuthenticated(operationName: string): Promise<void>;
     getAccessToken(): Promise<string>;
     refreshAccessToken(): Promise<string>;
+    getServerAuthSnapshot(): Promise<OmlCliServerAuthSnapshot>;
+    storeRefreshedTokens(accessToken: string, refreshToken: string, expiresAtMs: number): Promise<void>;
     private authenticate;
 }
 export {};

package/out/{auth.js → auth/auth.js}

@@ -4,7 +4,7 @@ import chalk from 'chalk';
 import * as fs from 'node:fs/promises';
 import * as os from 'node:os';
 import * as path from 'node:path';
-import { DEFAULT_API_BASE_URL, DEFAULT_SUPABASE_ANON_KEY, DEFAULT_SUPABASE_URL } from './platform-constants.js';
+import { DEFAULT_API_BASE_URL, DEFAULT_SUPABASE_ANON_KEY, DEFAULT_SUPABASE_URL } from './constants.js';
 const GITHUB_DEVICE_CODE_URL = 'https://github.com/login/device/code';
 const GITHUB_TOKEN_URL = 'https://github.com/login/oauth/access_token';
 const GITHUB_USER_URL = 'https://api.github.com/user';
@@ -15,7 +15,7 @@ const SUPABASE_ANON_KEY_ENV = 'OML_SUPABASE_ANON_KEY';
 export class OmlCliAuthService {
     async login(options) {
         const session = await this.authenticate();
-        await writeSession(session);
+        await writeSession(session, true);
         const summary = session.userLabel ?? session.email ?? 'signed-in user';
         console.error(chalk.green(`Signed in as ${summary} via ${session.provider}.`));
     }
@@ -68,10 +68,45 @@ export class OmlCliAuthService {
             tokenType: refreshed.token_type,
             expiresIn: refreshed.expires_in,
             email: refreshed.email ?? session.email,
+            signedInAt: new Date().toISOString(),
         };
         await writeSession(updatedSession);
         return updatedSession.accessToken;
     }
+    async getServerAuthSnapshot() {
+        const session = await readSession();
+        if (!session?.accessToken) {
+            throw new Error('OML CLI authentication is required. Run \'oml login\' first.');
+        }
+        const signedInAtMs = Date.parse(session.signedInAt);
+        const expiresAtMs = Number.isFinite(signedInAtMs)
+            ? signedInAtMs + (session.expiresIn * 1000)
+            : undefined;
+        if (expiresAtMs !== undefined && Date.now() + 20000 >= expiresAtMs) {
+            await this.refreshAccessToken();
+            return await this.getServerAuthSnapshot();
+        }
+        return {
+            accessToken: session.accessToken,
+            refreshToken: session.refreshToken,
+            expiresAtMs,
+        };
+    }
+    async storeRefreshedTokens(accessToken, refreshToken, expiresAtMs) {
+        const session = await readSession();
+        if (!session) {
+            return;
+        }
+        const expiresIn = Math.max(0, Math.round((expiresAtMs - Date.now()) / 1000));
+        const updatedSession = {
+            ...session,
+            accessToken,
+            refreshToken,
+            expiresIn,
+            signedInAt: new Date().toISOString(),
+        };
+        await writeSession(updatedSession);
+    }
     async authenticate() {
         return authenticateWithGitHub();
     }
@@ -109,10 +144,14 @@ async function readSession() {
         return undefined;
     }
 }
-async function writeSession(session) {
+async function writeSession(session, warnAboutPlaintext = false) {
     const sessionPath = getSessionPath();
     await fs.mkdir(path.dirname(sessionPath), { recursive: true });
     await fs.writeFile(sessionPath, `${JSON.stringify(session, null, 2)}\n`, 'utf-8');
+    if (warnAboutPlaintext) {
+        process.stderr.write(chalk.yellow(`[oml] Warning: credentials stored in plaintext at ${sessionPath}. ` +
+            `A system keychain is not available in this environment.\n`));
+    }
 }
 async function deleteSession() {
     try {

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package/out/{platform-constants.js → auth/constants.js}

@@ -2,4 +2,4 @@
 export const DEFAULT_API_BASE_URL = 'https://oml-platform-worker.melaasar.workers.dev';
 export const DEFAULT_SUPABASE_URL = 'https://lrbsnujufmasiyvslhmw.supabase.co';
 export const DEFAULT_SUPABASE_ANON_KEY = 'eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJzdXBhYmFzZSIsInJlZiI6ImxyYnNudWp1Zm1hc2l5dnNsaG13Iiwicm9sZSI6ImFub24iLCJpYXQiOjE3NzM3MjM3ODgsImV4cCI6MjA4OTI5OTc4OH0._gip9hlWPMbwxbS_zDIUXWLstWO7KWVev6HPU-5HVsw';
-//# sourceMappingURL=platform-constants.js.map
+//# sourceMappingURL=constants.js.map

package/out/auth/constants.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"constants.js","sourceRoot":"","sources":["../../src/auth/constants.ts"],"names":[],"mappings":"AAAA,qDAAqD;AAErD,MAAM,CAAC,MAAM,oBAAoB,GAAG,kDAAkD,CAAC;AACvF,MAAM,CAAC,MAAM,oBAAoB,GAAG,0CAA0C,CAAC;AAC/E,MAAM,CAAC,MAAM,yBAAyB,GAAG,kNAAkN,CAAC"}

package/out/{platform.d.ts → auth/platform.d.ts}

@@ -1,19 +1,17 @@
 /**
  * OML Platform integration for the CLI.
  *
- * The platform is the sole authorization mechanism. Users must have
- * a valid API key configured and the platform must be reachable for
- * commands to execute. No whitelist or other fallback is used.
+ * The platform is the sole authorization mechanism. Users must be
+ * authenticated via oml login and the platform must be reachable for
+ * commands to execute.
  */
 import { OmlClient } from '@oml/platform';
 import { OmlCliAuthService } from './auth.js';
 export type CommandInvocationTracker = ReturnType<OmlClient['trackInvocation']>;
 /**
  * Initialize the platform client. Call once during CLI startup.
- * Uses OML_PLATFORM_API_KEY when present, otherwise the stored
- * OAuth platform session from OML CLI login.
- * Throws if the platform is unreachable or the chosen auth mode
- * is not configured.
+ * Uses the stored OAuth session from oml login.
+ * Throws if the platform is unreachable or the user is not authenticated.
  */
 export declare function initializePlatform(authService: OmlCliAuthService, apiBaseUrl?: string): Promise<void>;
 /**

package/out/{platform.js → auth/platform.js}

@@ -2,39 +2,33 @@
 /**
  * OML Platform integration for the CLI.
  *
- * The platform is the sole authorization mechanism. Users must have
- * a valid API key configured and the platform must be reachable for
- * commands to execute. No whitelist or other fallback is used.
+ * The platform is the sole authorization mechanism. Users must be
+ * authenticated via oml login and the platform must be reachable for
+ * commands to execute.
  */
 import { OmlClient, FileStorageAdapter, installNodeShutdownHandlers } from '@oml/platform';
 import chalk from 'chalk';
-import { DEFAULT_API_BASE_URL } from './platform-constants.js';
+import { DEFAULT_API_BASE_URL } from './constants.js';
 const API_BASE_URL_ENV = 'OML_PLATFORM_API_URL';
-const PLATFORM_DEBUG_ENV = 'OML_PLATFORM_DEBUG';
 let client = null;
 let shutdownHandle = null;
 /**
  * Initialize the platform client. Call once during CLI startup.
- * Uses OML_PLATFORM_API_KEY when present, otherwise the stored
- * OAuth platform session from OML CLI login.
- * Throws if the platform is unreachable or the chosen auth mode
- * is not configured.
+ * Uses the stored OAuth session from oml login.
+ * Throws if the platform is unreachable or the user is not authenticated.
  */
 export async function initializePlatform(authService, apiBaseUrl = DEFAULT_API_BASE_URL) {
     await disposePlatform();
-    const key = process.env.OML_PLATFORM_API_KEY;
     const resolvedApiBaseUrl = process.env[API_BASE_URL_ENV]?.trim() || apiBaseUrl;
     const config = {
         apiBaseUrl: resolvedApiBaseUrl,
         tool: 'oml-cli',
         storage: new FileStorageAdapter(),
-        auth: key
-            ? { method: 'api_key', key }
-            : {
-                method: 'oauth',
-                getToken: () => authService.getAccessToken(),
-                refreshToken: () => authService.refreshAccessToken(),
-            },
+        auth: {
+            method: 'oauth',
+            getToken: () => authService.getAccessToken(),
+            refreshToken: () => authService.refreshAccessToken(),
+        },
         onConcurrencyLimit: (info) => {
             console.error(chalk.yellow(`OML Platform: concurrent session limit reached `
                 + `(${info.active_sessions}/${info.max_sessions}). `
@@ -43,7 +37,7 @@ export async function initializePlatform(authService, apiBaseUrl = DEFAULT_API_B
         onAuthError: (error) => {
             console.error(chalk.red(`OML Platform: authentication error — ${toGenericPlatformErrorMessage(error)}`));
         },
-        debug: process.env.OML_PLATFORM_DEBUG === '1',
+        debug: isDebugEnabled(),
     };
     const platformClient = new OmlClient(config);
     try {
@@ -93,7 +87,7 @@ function toGenericPlatformErrorMessage(error) {
     return message;
 }
 function isDebugEnabled() {
-    return process.env[PLATFORM_DEBUG_ENV] === '1';
+    return process.env.OML_PLATFORM_DEBUG === '1';
 }
 function formatErrorChain(error) {
     if (!(error instanceof Error)) {

package/out/auth/platform.js.map

@@ -0,0 +1 @@
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package/out/cli.d.ts

@@ -1,2 +1,8 @@
+export interface CliCommandInfo {
+    name: string;
+    description: string;
+    usage?: string;
+}
+export declare function getWorkspaceCommands(): CliCommandInfo[];
 export declare function runCli(argv?: string[]): Promise<void>;
 export declare function reportCliError(error: unknown): number;