@omicverse/omicos 0.2.30 → 0.2.31

package/bin/postinstall.js

@@ -0,0 +1,86 @@
+#!/usr/bin/env node
+"use strict";
+
+const fs = require("node:fs");
+const os = require("node:os");
+const path = require("node:path");
+
+function isGlobalInstall() {
+  return process.env.npm_config_global === "true";
+}
+
+function canExecute(file) {
+  try {
+    const stat = fs.statSync(file);
+    if (!stat.isFile() && !stat.isSymbolicLink()) return false;
+    fs.accessSync(file, fs.constants.X_OK);
+    return true;
+  } catch (_e) {
+    return false;
+  }
+}
+
+function realpathOrSelf(file) {
+  try {
+    return fs.realpathSync(file);
+  } catch (_e) {
+    return file;
+  }
+}
+
+function pathEntries() {
+  return (process.env.PATH || "")
+    .split(path.delimiter)
+    .filter(Boolean);
+}
+
+function findOmicosOnPath() {
+  const seen = new Set();
+  const matches = [];
+  for (const dir of pathEntries()) {
+    const candidate = path.join(dir, "omicos");
+    if (!canExecute(candidate)) continue;
+    const resolved = realpathOrSelf(candidate);
+    if (seen.has(resolved)) continue;
+    seen.add(resolved);
+    matches.push({ path: candidate, resolved });
+  }
+  return matches;
+}
+
+function shellQuote(value) {
+  return `'${String(value).replace(/'/g, "'\\''")}'`;
+}
+
+function main() {
+  if (process.platform === "win32" || !isGlobalInstall()) return;
+
+  const ownWrapper = realpathOrSelf(path.join(__dirname, "omicos.js"));
+  const matches = findOmicosOnPath();
+  const first = matches[0];
+  if (!first || first.resolved === ownWrapper) return;
+
+  const npmBin = process.env.npm_config_prefix
+    ? path.join(process.env.npm_config_prefix, "bin")
+    : "$(npm prefix -g)/bin";
+  const legacyPath = path.join(os.homedir(), ".local", "bin", "omicos");
+
+  console.warn("");
+  console.warn("OmicOS notice: npm installed @omicverse/omicos, but your shell currently resolves a different `omicos` first.");
+  console.warn(`  current first: ${first.path}`);
+  console.warn(`  npm bin:       ${npmBin}`);
+  console.warn("");
+  console.warn("To use the npm-installed OmicOS in this shell:");
+  console.warn(`  export PATH=${shellQuote(npmBin)}:"$PATH"`);
+  console.warn("  hash -r 2>/dev/null || rehash");
+  console.warn("  omicos -V");
+  console.warn("");
+  console.warn("If the first path is the older official Linux installer binary, back it up with:");
+  console.warn(`  mv ${shellQuote(legacyPath)} ${shellQuote(`${legacyPath}.old`)}`);
+  console.warn("");
+  console.warn("Debug command:");
+  console.warn("  type -a omicos");
+  console.warn("");
+}
+
+main();

package/package.json

@@ -1,10 +1,13 @@
 {
   "name": "@omicverse/omicos",
-  "version": "0.2.30",
+  "version": "0.2.31",
   "description": "OmicOS \u2014 agentic omics-analysis runtime & CLI (omicos-core). Installs the matching native binary for your platform.",
   "bin": {
     "omicos": "bin/omicos.js"
   },
+  "scripts": {
+    "postinstall": "node bin/postinstall.js"
+  },
   "files": [
     "bin"
   ],
@@ -16,12 +19,12 @@
     "url": "git+https://github.com/PrimorDecode/omicos-core.git"
   },
   "optionalDependencies": {
-    "@omicverse/omicos-linux-x64": "0.2.30",
-    "@omicverse/omicos-linux-arm64": "0.2.30",
-    "@omicverse/omicos-darwin-x64": "0.2.30",
-    "@omicverse/omicos-darwin-arm64": "0.2.30",
-    "@omicverse/omicos-win32-x64": "0.2.30",
-    "@omicverse/omicos-win32-arm64": "0.2.30"
+    "@omicverse/omicos-linux-x64": "0.2.31",
+    "@omicverse/omicos-linux-arm64": "0.2.31",
+    "@omicverse/omicos-darwin-x64": "0.2.31",
+    "@omicverse/omicos-darwin-arm64": "0.2.31",
+    "@omicverse/omicos-win32-x64": "0.2.31",
+    "@omicverse/omicos-win32-arm64": "0.2.31"
   },
   "publishConfig": {
     "access": "public"