@nsshunt/stsappframework 3.1.148 → 3.1.150

package/src/fhir/dalFhirTestHelpers.ts

@@ -1,276 +0,0 @@
-import { expect } from 'vitest';
-import { IDALFhirDataAccessManager, INarrative, IPerson } from './STSFhirTypes'
-import { v4 as uuidv4 } from 'uuid';
-
-import chalk from 'chalk';
-
-import { goptions, $ResetOptions } from '@nsshunt/stsconfig'
-
-import { JestSleep, defaultLogger, Sleep } from '@nsshunt/stsutils'
-
-import { DatabaseUtils, DBAccessLayerManager, IDBAccessLayer, accessLayerType, IPGAccessLayerOptions } from '@nsshunt/stsdatamanagement'
-
-import { GenericContainer } from "testcontainers";
-
-import winston from 'winston'
-
-export class TestHelpers {
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any
-    #postgresContainer: any;
-    #accessLayer: IDBAccessLayer | null = null;
-    #logger: winston.Logger;
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any
-    #ioRedisContainer: any;
-    #ioRedisMessageProcessorUrl = '';
-
-    constructor() {
-        winston.format.combine(
-            winston.format.colorize(),
-            winston.format.simple()
-        );
-    
-        this.#logger = winston.createLogger({
-            level: 'silly',
-            format: winston.format.combine(
-                winston.format.colorize(),
-                winston.format.simple()
-            ),
-            transports: [
-                new winston.transports.Console(),
-            ]});
-    }
-
-    get logger(): winston.Logger {
-        return this.#logger;
-    }
-
-    TestFhirPerson = async (personManager: IDALFhirDataAccessManager<IPerson>) => {
-        expect.assertions(6);
-
-        const id = uuidv4();
-
-        const personRecord: IPerson = {
-            id,
-            _resourceType: 'Person',
-            name: [
-                {
-                    family: 'family',
-                    given: [ 'given' ],
-                    use: 'usual'
-                }
-            ],
-            text: {
-                div: 'New Record',
-                status: 'generated'
-            }
-        };
-
-        const newPerson01 = await personManager.CreateFhirResource(personRecord);
-        expect(newPerson01).toMatchObject(personRecord);
-
-        (personRecord.text as INarrative).div = 'user01 updated at ' + new Date().toString();
-        const updatedPerson01 = await personManager.UpdateFhirResource(personRecord);
-        expect(updatedPerson01).toMatchObject(personRecord);
-
-        const getPerson01 = await personManager.GetFhirResource({id})
-        expect(getPerson01).toMatchObject(personRecord);
-
-        const getPerson02 = await personManager.GetFhirResource({id:'willnotfind'})
-        expect(getPerson02).toBeNull();
-
-        const deletePerson01 = await personManager.DeleteFhirResource({id})
-        expect(deletePerson01).toMatchObject(personRecord);
-
-        const getPerson01AfterDelete = await personManager.GetFhirResource({id})
-        expect(getPerson01AfterDelete).toBeNull();
-    }
-
-    AddFhirPersons = async (personManager: IDALFhirDataAccessManager<IPerson>, iterations: number) => {
-        for (let i=0; i < iterations; i++) {
-            const id = uuidv4();
-
-            const personRecord: IPerson = {
-                id,
-                _resourceType: 'Person',
-                name: [
-                    {
-                        family: `family ${i}`,
-                        given: [ `given ${i}` ],
-                        use: `usual`
-                    }
-                ],
-                text: {
-                    div: `New Record ${i}`,
-                    status: 'generated'
-                }
-            };
-
-            const newPerson01 = await personManager.CreateFhirResource(personRecord);
-            expect(newPerson01).toMatchObject(personRecord);
-        }
-    }
-
-    AddFhirPersonsByArray = async (personManager: IDALFhirDataAccessManager<IPerson>, iterations: number) => {
-        const persons: IPerson[] = [ ];
-        for (let i=0; i < iterations; i++) {
-            const id = `bulk_${i}`;
-
-            const personRecord: IPerson = {
-                id,
-                _resourceType: 'Person',
-                name: [
-                    {
-                        family: `family ${i}`,
-                        given: [ `given ${i}` ],
-                        use: `usual`
-                    }
-                ],
-                text: {
-                    div: `New Record ${i}`,
-                    status: 'generated'
-                }
-            };
-
-            persons.push(personRecord);
-        }
-
-        const newPersons = await personManager.CreateFhirResources(persons);
-        expect(newPersons).toMatchObject(persons);
-    }
-
-    UpdateFhirPersonsByArray = async (personManager: IDALFhirDataAccessManager<IPerson>, iterations: number) => {
-        const persons: IPerson[] = [ ];
-        for (let i=0; i < iterations; i++) {
-            const id = `bulk_${i}`;
-
-            const personRecord: IPerson = {
-                id,
-                _resourceType: 'Person',
-                name: [
-                    {
-                        family: `family ${i}`,
-                        given: [ `given ${i}` ],
-                        use: `usual`
-                    }
-                ],
-                text: {
-                    div: `Updated Record ${i}`,
-                    status: 'generated'
-                }
-            };
-
-            persons.push(personRecord);
-        }
-
-        const newPersons = await personManager.UpdateFhirResources(persons);
-        expect(newPersons).toMatchObject(persons);
-    }
-
-    DeleteFhirPersonsByArray = async (personManager: IDALFhirDataAccessManager<IPerson>, iterations: number) => {
-        const persons: IPerson[] = [ ];
-        for (let i=0; i < iterations; i++) {
-            const id = `bulk_${i}`;
-
-            const personRecord: IPerson = {
-                id,
-                _resourceType: 'Person',
-                name: [
-                    {
-                        family: `family ${i}`,
-                        given: [ `given ${i}` ],
-                        use: `usual`
-                    }
-                ],
-                text: {
-                    div: `Updated Record ${i}`,
-                    status: 'generated'
-                }
-            };
-
-            persons.push(personRecord);
-        }
-
-        const newPersons = await personManager.DeleteFhirResources(persons);
-        expect(newPersons).toMatchObject(persons);
-    }
-
-    StartDatabase = async() => {
-        this.#postgresContainer = await new GenericContainer("postgres")
-            .withExposedPorts(5432)
-            .withEnvironment({
-                POSTGRES_PASSWORD: "postgres",
-                //UV_THREADPOOL_SIZE: "64"
-            })
-            .withCommand(['-c', 'max_connections=20'])
-            .start();
-
-        await Sleep(1000);
-
-        const postgresHttpPort = this.#postgresContainer.getMappedPort(5432);
-        const postgresHost = this.#postgresContainer.getHost();
-
-        process.env.DB_HOST = `${postgresHost}:${postgresHttpPort}`;
-        process.env.POOL_SIZE = '10';
-
-        $ResetOptions();
-
-        this.logger.info(chalk.green(`httpPort: [${postgresHttpPort}]`));
-        this.logger.info(chalk.green(`host: [${postgresHost}]`));
-        this.logger.info(chalk.yellow(`connectionString: [${goptions.connectionString}]`));
-        this.logger.info(chalk.yellow(`defaultDatabaseConnectionString: [${goptions.defaultDatabaseConnectionString }]`));
-
-        const dbOptions = {
-            start: 0,
-            iterations: 10000,
-            minextradata: 0,
-            maxextradata: 1000,
-            workerScriptFolder: './dist', //@@
-            useMultiBar: false
-        }
-
-        const dbUtils = new DatabaseUtils({
-            logger: this.logger
-        });
-        await dbUtils.CreateDatabase(dbOptions);
-
-        await Sleep(1000);
-
-        this.logger.info(chalk.green(`Starting accessLayer`));
-
-        this.#accessLayer = new DBAccessLayerManager().CreateAccessLayer({
-            accessLayerType: accessLayerType.postgresql,
-            accessLayerOptions: {
-                logger: defaultLogger,
-                usedefaultdb: false
-            } as IPGAccessLayerOptions
-        })
-
-        this.logger.info(chalk.green(`accessLayer:startdatabase()`));
-        await this.#accessLayer.StartDatabase();
-    }
-
-    get accessLayer() {
-        return this.#accessLayer;
-    }
-
-    StopDatabase = async () => {
-        await this.#accessLayer?.EndDatabase();
-        await JestSleep();
-        await this.#postgresContainer.stop();
-    }
-
-    StartRedis = async () => {
-        this.#ioRedisContainer = await new GenericContainer("redis/redis-stack-server")
-            .withExposedPorts(6379)
-            .start();
-        this.#ioRedisMessageProcessorUrl = `redis://${this.#ioRedisContainer.getHost()}:${this.#ioRedisContainer.getMappedPort(6379)}`;            
-    }
-
-    get ioRedisMessageProcessorUrl() {
-        return this.#ioRedisMessageProcessorUrl;
-    }
-
-    StopRedis = async () => {
-        await this.#ioRedisContainer.stop();
-    }
-}

package/types/fhir/STSFhirTypes.d.ts

@@ -1,351 +0,0 @@
-import { IDBAccessLayer } from '@nsshunt/stsdatamanagement';
-import { JSONObject } from '@nsshunt/stsutils';
-export interface IBase {
-}
-export interface IExtension {
-}
-export interface IElement extends IBase {
-    id?: string;
-    extension?: IExtension;
-}
-export interface IDataType extends IElement {
-}
-export interface IPrimitiveType extends IDataType {
-}
-export interface ICode extends IPrimitiveType {
-}
-export interface IResource extends IBase {
-    id?: IId;
-    meta?: IMeta;
-    implicitRules?: string;
-    language?: string;
-}
-export type IId = string;
-export type IUri = string;
-export type IUrl = string;
-export interface ICanonical<T> extends IPrimitiveType {
-    uri: IUri;
-    _type: T;
-}
-export type IMarkdown = string;
-export type IMimeType = string;
-export interface IMeta extends IDataType {
-    versionId?: IId;
-    lastUpdated?: IInstant;
-    source?: IUri;
-    profile?: ICanonical<IStructureDefinition>[];
-    security?: ICoding[];
-    tag?: ICoding[];
-}
-export interface INarrative extends IDataType {
-    status: 'generated' | 'extensions' | 'additional' | 'empty';
-    div: string;
-}
-export interface IDomainResource extends IResource {
-    text?: INarrative;
-    contained?: IResource;
-    extension?: IExtension;
-    modifierExtension?: IExtension;
-    _resourceType: string;
-}
-export interface IStructureDefinition extends IDomainResource {
-    _resourceType: "StructureDefinition";
-    url: IUri;
-    identifier?: IIdentifier[];
-    version?: string;
-    versionAlgorithmString?: string;
-    versionAlgorithmCoding?: ICoding;
-    name: string;
-    title?: string;
-    status: 'draft' | 'active' | 'retired' | 'unknown';
-    experimental?: boolean;
-    date?: IDateTime;
-    publisher?: string;
-    contact?: IContactDetail[];
-    description?: IMarkdown;
-    useContext?: IUsageContext[];
-    jurisdiction?: ICodeableConcept[];
-    purpose?: IMarkdown;
-    copyright?: IMarkdown;
-    copyrightLabel?: string;
-    keyword?: ICoding[];
-    fhirVersion?: ICode;
-    mapping?: {
-        identity: IId;
-        uri?: IUri;
-        name?: string;
-        comment?: string;
-    }[];
-    kind: 'primitive-type' | 'complex-type' | 'resource' | 'logical';
-    abstract: boolean;
-    context?: {
-        type: 'fhirpath' | 'element' | 'extension';
-        expression: string;
-    }[];
-    contextInvariant?: string[];
-    type: IUri;
-    baseDefinition?: ICanonical<IStructureDefinition>;
-    derivation?: 'specialization' | 'constraint';
-    snapshot?: {
-        element: IElementDefinition[];
-    };
-    differential?: {
-        element: IElementDefinition[];
-    };
-}
-export interface ICoding extends IDataType {
-    system?: IUri;
-    version?: string;
-    code?: string;
-    display?: string;
-    userSelected?: boolean;
-}
-export interface ICodeableConcept {
-    coding?: ICoding[];
-    text?: string;
-}
-export interface IReference<T> extends IDataType {
-    reference?: string;
-    type?: IUri;
-    identifier?: IIdentifier;
-    display?: string;
-    _type: T;
-}
-export interface ICodeableReference<T> extends IDataType {
-    concept?: ICodeableConcept;
-    reference?: IReference<T>;
-}
-export interface IIdentifier extends IDataType {
-    use?: "usual" | "official" | "temp" | "secondary" | "old";
-    type?: ICodeableConcept;
-    system?: string;
-    value?: string;
-    period?: IPeriod;
-    assigner?: IReference<IOrganization>;
-}
-export interface IPeriod extends IDataType {
-    start?: Date;
-    end?: Date;
-}
-export interface IInstant extends IPrimitiveType {
-    dateTime: Date | number | string;
-}
-export interface IDateTime extends IPrimitiveType {
-    dateTime: Date | number | string;
-}
-export interface IMoney extends IDataType {
-    value?: number;
-    currency?: string;
-}
-export interface IContactDetail {
-}
-export interface IElementDefinition {
-}
-export interface IUsageContext {
-}
-export interface IAccount extends IDomainResource {
-    _resourceType: "Account";
-    identifier?: IIdentifier[];
-    status: "active" | "inactive" | "entered-in-error" | "on-hold" | "unknown";
-    billingStatus?: ICodeableConcept;
-    type?: ICodeableConcept;
-    name?: string;
-    subject?: IReference<IDevice | IHealthcareService | ILocation | IOrganization | IPatient | IPractitioner | IPractitionerRole>[];
-    servicePeriod?: IPeriod;
-    coverage?: [
-        {
-            coverage: IReference<ICoverage>;
-            priority?: number;
-        }
-    ];
-    owner?: IReference<IOrganization>;
-    description?: string;
-    guarantor?: {
-        party: IReference<IOrganization | IPatient | IRelatedPerson>;
-        onHold?: true;
-        period?: IPeriod;
-    }[];
-    diagnosis?: {
-        sequence?: number;
-        condition: ICodeableReference<ICondition>;
-        dateOfDiagnosis?: IDateTime;
-        type?: ICodeableConcept[];
-        onAdmission?: boolean;
-        packageCode?: ICodeableConcept[];
-    }[];
-    procedure?: {
-        sequence?: number;
-        code: ICodeableReference<IProcedure>;
-        dateOfService?: IDateTime;
-        type?: ICodeableConcept[];
-        packageCode?: ICodeableConcept[];
-        device?: IReference<IDevice>[];
-    }[];
-    relatedAccount?: {
-        relationship?: ICodeableConcept;
-        account: IReference<IAccount>;
-    }[];
-    currency?: ICodeableConcept;
-    balance?: {
-        aggregate?: ICodeableConcept;
-        term?: ICodeableConcept;
-        estimate?: boolean;
-        amount: IMoney;
-    }[];
-    calculatedAt?: IInstant;
-}
-export interface IOrganization extends IDomainResource {
-    _resourceType: "Organization";
-    identifier?: IIdentifier[];
-    active?: boolean;
-    type?: ICodeableConcept[];
-    name?: string;
-    alias?: string[];
-    description?: IMarkdown;
-    contact?: IExtendedContactDetail[];
-    partOf?: IReference<IOrganization>;
-    endpoint?: IReference<IEndpoint>[];
-    qualification?: {
-        identifier?: IIdentifier[];
-        code: ICodeableConcept;
-        period?: IPeriod;
-        issuer?: IReference<IOrganization>;
-    }[];
-}
-export interface IEndpoint extends IDomainResource {
-    resourceType: "Endpoint";
-    identifier?: IIdentifier[];
-    status: 'active' | 'suspended' | 'error' | 'off' | 'entered-in-error' | 'test';
-    connectionType: ICodeableConcept[];
-    name?: string;
-    description?: string;
-    environmentType?: ICodeableConcept[];
-    managingOrganization?: IReference<IOrganization>;
-    contact?: IContactPoint[];
-    period?: IPeriod;
-    payload?: {
-        type?: ICodeableConcept[];
-        mimeType?: IMimeType[];
-    }[];
-    address: IUrl;
-    header?: string[];
-}
-export interface IExtendedContactDetail extends IDataType {
-    purpose?: ICodeableConcept;
-    name?: IHumanName[];
-    telecom?: IContactPoint[];
-    address?: IAddress;
-    organization?: IReference<IOrganization>;
-    period?: IPeriod;
-}
-export interface IHumanName extends IDataType {
-    use?: 'usual' | 'official' | 'temp' | 'nickname' | 'anonymous' | 'old' | 'maiden';
-    text?: string;
-    family?: string;
-    given?: string[];
-    prefix?: string[];
-    suffix?: string[];
-    period?: IPeriod;
-}
-export interface IContactPoint extends IDataType {
-    system?: 'phone' | 'fax' | 'email' | 'pager' | 'url' | 'sms' | 'other';
-    value?: string;
-    use?: 'home' | 'work' | 'temp' | 'old' | 'mobile';
-    rank?: number;
-    period?: IPeriod;
-}
-export interface IAddress {
-}
-export interface ICoverage {
-}
-export interface IPatient {
-}
-export interface IDevice {
-}
-export interface IHealthcareService {
-}
-export interface ILocation {
-}
-export interface IPractitioner {
-}
-export interface IPractitionerRole {
-}
-export interface IRelatedPerson {
-}
-export interface ICondition {
-}
-export interface IProcedure {
-}
-export interface IAttachment {
-}
-export interface IPerson extends IDomainResource {
-    _resourceType: "Person";
-    identifier?: IIdentifier[];
-    active?: boolean;
-    name?: IHumanName[];
-    telecom?: IContactPoint[];
-    gender?: 'male' | 'female' | 'other' | 'unknown';
-    birthDate?: Date;
-    deceasedBoolean?: boolean;
-    deceasedDateTime?: IDateTime;
-    address?: IAddress[];
-    maritalStatus?: ICodeableConcept;
-    photo?: IAttachment[];
-    communication?: {
-        language: ICodeableConcept;
-        preferred?: boolean;
-    }[];
-    managingOrganization?: IReference<IOrganization>[];
-    link?: {
-        target: IReference<IPatient | IPerson | IPractitioner | IRelatedPerson>;
-        assurance?: 'level1' | 'level2' | 'level3' | 'level4';
-    }[];
-}
-export interface IFHIRResource {
-    name: string;
-    description: string;
-    notes: string;
-}
-export interface IPersonResource {
-    name: string;
-    description: string;
-    notes: string;
-}
-export interface IDALFhirDataAccessManager<T> {
-    GetFhirResource(fhir: Partial<T>, ecb?: (fhir: Partial<T>, error: Error) => void): Promise<T | null>;
-    GetFhirResources(filters: string[], ecb?: (filters: string[], error: Error) => void): Promise<T[] | null>;
-    CreateFhirResource(fhir: T, ecb?: (fhir: T, error: Error) => void): Promise<T | null>;
-    CreateFhirResources(fhir: T[], ecb?: (fhir: T, error: Error) => void): Promise<(T | null)[]>;
-    UpdateFhirResource(fhir: T, ecb?: (fhir: T, error: Error) => void): Promise<T | null>;
-    UpdateFhirResources(fhir: T[], ecb?: (fhir: T, error: Error) => void): Promise<(T | null)[]>;
-    DeleteFhirResource(fhir: Partial<T>, ecb?: (fhir: Partial<T>, error: Error) => void): Promise<T | null>;
-    DeleteFhirResources(fhir: Partial<T>[], ecb?: (fhir: Partial<T>, error: Error) => void): Promise<(T | null)[]>;
-    Start(): Promise<void>;
-    Stop(): Promise<void>;
-    get options(): JSONObject;
-    set options(options: JSONObject);
-}
-export interface IFhirManagerBaseOptions {
-    resourceName: string;
-    dbactionuser: string;
-}
-export interface IFhirManagerPGResOptions extends IFhirManagerBaseOptions {
-    accessLayer: IDBAccessLayer;
-}
-export interface IFhirManagerPGResEntityOptions extends IFhirManagerBaseOptions {
-    accessLayer: IDBAccessLayer;
-}
-export interface IFhirManagerRedisJsonOptions extends IFhirManagerBaseOptions {
-    redisUrl: string;
-}
-export declare enum IFhirPersistenceType {
-    postgresResources = 0,
-    postgresResourcesEntities = 1,
-    redisJson = 2,
-    ioredisJson = 3
-}
-export interface IDALFhirManagerOptions {
-    persistenceType: IFhirPersistenceType;
-    persistenceTypeOptions: IFhirManagerPGResOptions | IFhirManagerPGResEntityOptions | IFhirManagerRedisJsonOptions;
-}
-//# sourceMappingURL=STSFhirTypes.d.ts.map

package/types/fhir/STSFhirTypes.d.ts.map

@@ -1 +0,0 @@
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package/types/fhir/dalFhirManager.d.ts

@@ -1,7 +0,0 @@
-import { IDALFhirDataAccessManager, IDALFhirManagerOptions } from './STSFhirTypes';
-export declare class DALFhirManager<T> {
-    #private;
-    constructor(options: IDALFhirManagerOptions);
-    get fhirDataAccessManager(): IDALFhirDataAccessManager<T>;
-}
-//# sourceMappingURL=dalFhirManager.d.ts.map

package/types/fhir/dalFhirManager.d.ts.map

@@ -1 +0,0 @@
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package/types/fhir/dalFhirManagerBase.d.ts

@@ -1,19 +0,0 @@
-import { IDALFhirDataAccessManager, IFhirManagerBaseOptions } from './STSFhirTypes';
-export declare abstract class DALFhirManagerBase<T> implements IDALFhirDataAccessManager<T> {
-    #private;
-    constructor(options: IFhirManagerBaseOptions);
-    get options(): IFhirManagerBaseOptions;
-    set options(options: IFhirManagerBaseOptions);
-    Start(): Promise<void>;
-    Stop(): Promise<void>;
-    GetResourceType(fhir: Partial<T>): string;
-    GetFhirResource(fhir: Partial<T>, ecb?: (fhir: Partial<T>, error: Error) => void): Promise<T | null>;
-    CreateFhirResource(fhir: T, ecb?: (fhir: T, error: Error) => void): Promise<T | null>;
-    UpdateFhirResource(fhir: T, ecb?: (fhir: T, error: Error) => void): Promise<T | null>;
-    DeleteFhirResource(fhir: Partial<T>, ecb?: (fhir: Partial<T>, error: Error) => void): Promise<T | null>;
-    GetFhirResources(filters: string[], ecb?: (filters: string[], error: Error) => void): Promise<T[] | null>;
-    CreateFhirResources(fhir: T[], ecb?: (fhir: T, error: Error) => void): Promise<(T | null)[]>;
-    UpdateFhirResources(fhir: T[], ecb?: (fhir: T, error: Error) => void): Promise<(T | null)[]>;
-    DeleteFhirResources(fhir: Partial<T>[], ecb?: (fhir: Partial<T>, error: Error) => void): Promise<(T | null)[]>;
-}
-//# sourceMappingURL=dalFhirManagerBase.d.ts.map

package/types/fhir/dalFhirManagerBase.d.ts.map

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