@noyrax/5d-database-plugin 0.1.14-beta.1 → 0.1.14-beta.11

package/out/core/migration-manager.js.map

@@ -1 +1 @@
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package/out/core/multi-db-manager.d.ts

@@ -24,6 +24,9 @@ export declare class MultiDbManager {
      * Computes a stable plugin_id from the workspace root path.
      * Uses SHA256 hash of normalized path, takes first 16 characters.
      *
+     * Normalization: POSIX-style (forward slashes), lowercase on Windows (case-insensitive).
+     * This matches WorkspaceResolver.computePluginId() for consistency.
+     *
      * @param workspaceRoot The workspace root directory
      * @returns Stable plugin ID (16 hex characters)
      */
@@ -32,12 +35,35 @@ export declare class MultiDbManager {
      * Ensures the database directory exists.
      */
     private ensureDbDirectory;
+    /**
+     * Checks if existing databases have a different plugin ID (e.g., after workspace move).
+     * Returns true if mismatch is detected, false otherwise.
+     *
+     * IMPORTANT: This method closes all open database connections before checking,
+     * to ensure databases can be deleted if cleanup is needed.
+     *
+     * @returns Promise that resolves to true if plugin ID mismatch detected, false otherwise
+     */
+    checkPluginIdMismatch(): Promise<boolean>;
     /**
      * Checks if existing databases have a different plugin ID (e.g., after workspace move).
      * This is informational only and does not block operation.
      * Note: This is a best-effort check and may not catch all cases.
      */
     private checkPluginIdConsistency;
+    /**
+     * Cleans up old databases with different plugin IDs.
+     * Closes all open database connections, then deletes all database files.
+     *
+     * WARNING: This will permanently delete all existing database data.
+     * Use only when you want to start fresh after workspace move/rename.
+     *
+     * Note: If databases are locked by another process (e.g., VS Code Extension),
+     * deletion will fail with a warning. The new ingestion will overwrite old data anyway.
+     *
+     * @returns Promise that resolves when cleanup is complete
+     */
+    cleanupOldDatabases(): Promise<void>;
     /**
      * Gets the plugin ID for this workspace.
      */

package/out/core/multi-db-manager.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"multi-db-manager.d.ts","sourceRoot":"","sources":["../../src/core/multi-db-manager.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,OAAO,MAAM,SAAS,CAAC;AAKnC,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAG7D;;GAEG;AACH,MAAM,MAAM,SAAS,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,CAAC;AAc1D;;;GAGG;AACH,qBAAa,cAAc;IACvB,OAAO,CAAC,SAAS,CAA+C;IAChE,OAAO,CAAC,WAAW,CAAS;IAC5B,OAAO,CAAC,aAAa,CAAS;IAC9B,OAAO,CAAC,QAAQ,CAAS;IACzB,OAAO,CAAC,SAAS,CAAY;IAC7B,OAAO,CAAC,cAAc,CAA+B;IAErD;;;OAGG;gBACS,aAAa,EAAE,MAAM;IASjC;;;;;;;;;OASG;IACH,OAAO,CAAC,eAAe;IAevB;;OAEG;IACH,OAAO,CAAC,iBAAiB;IAMzB;;;;;;;;OAQG;IACU,qBAAqB,IAAI,OAAO,CAAC,OAAO,CAAC;IAqDtD;;;;OAIG;IACH,OAAO,CAAC,wBAAwB;IA4ChC;;;;;;;;;;;OAWG;IACU,mBAAmB,IAAI,OAAO,CAAC,IAAI,CAAC;IAqEjD;;OAEG;IACI,WAAW,IAAI,MAAM;IAI5B;;OAEG;IACI,cAAc,IAAI,MAAM;IAI/B;;OAEG;IACI,gBAAgB,IAAI,MAAM;IAIjC;;;;;;;OAOG;IACU,WAAW,CAAC,SAAS,EAAE,SAAS,GAAG,OAAO,CAAC,OAAO,CAAC,QAAQ,CAAC;IAsCzE;;;;;OAKG;IACU,aAAa,CAAC,SAAS,EAAE,SAAS,GAAG,OAAO,CAAC,IAAI,CAAC;IAgB/D;;;;OAIG;IACU,QAAQ,IAAI,OAAO,CAAC,IAAI,CAAC;IAQtC;;;;OAIG;IACI,gBAAgB,IAAI,GAAG,CAAC,SAAS,EAAE,OAAO,CAAC,QAAQ,CAAC;IAI3D;;;;;OAKG;IACI,iBAAiB,IAAI,cAAc,GAAG,IAAI;IAIjD;;;OAGG;IACI,aAAa,IAAI,GAAG,GAAG,IAAI;CAGrC"}

package/out/core/multi-db-manager.js

@@ -74,11 +74,20 @@ class MultiDbManager {
      * Computes a stable plugin_id from the workspace root path.
      * Uses SHA256 hash of normalized path, takes first 16 characters.
      *
+     * Normalization: POSIX-style (forward slashes), lowercase on Windows (case-insensitive).
+     * This matches WorkspaceResolver.computePluginId() for consistency.
+     *
      * @param workspaceRoot The workspace root directory
      * @returns Stable plugin ID (16 hex characters)
      */
     computePluginId(workspaceRoot) {
-        const normalizedPath = path.resolve(workspaceRoot).replace(/\\/g, '/').toLowerCase();
+        // Resolve to absolute path
+        const resolved = path.resolve(workspaceRoot);
+        // Convert to POSIX-style (forward slashes)
+        const posix = resolved.replace(/\\/g, '/');
+        // On Windows, normalize case (to lowercase for case-insensitive comparison)
+        // On Unix, preserve case
+        const normalizedPath = process.platform === 'win32' ? posix.toLowerCase() : posix;
         const hash = crypto.createHash('sha256').update(normalizedPath).digest('hex');
         return hash.substring(0, 16);
     }
@@ -90,6 +99,62 @@ class MultiDbManager {
             fs.mkdirSync(this.dbDirectory, { recursive: true });
         }
     }
+    /**
+     * Checks if existing databases have a different plugin ID (e.g., after workspace move).
+     * Returns true if mismatch is detected, false otherwise.
+     *
+     * IMPORTANT: This method closes all open database connections before checking,
+     * to ensure databases can be deleted if cleanup is needed.
+     *
+     * @returns Promise that resolves to true if plugin ID mismatch detected, false otherwise
+     */
+    async checkPluginIdMismatch() {
+        // Close all open database connections first to avoid lock issues
+        await this.closeAll();
+        if (!fs.existsSync(this.dbDirectory)) {
+            return false; // No databases exist yet
+        }
+        const dbFiles = [
+            { file: 'modules.db', table: 'modules' },
+            { file: 'symbols.db', table: 'symbols' },
+            { file: 'dependencies.db', table: 'dependencies' },
+            { file: 'adrs.db', table: 'adrs' },
+            { file: 'changes.db', table: 'change_reports' }
+        ];
+        // Check first available database file
+        for (const { file, table } of dbFiles) {
+            const dbPath = path.join(this.dbDirectory, file);
+            if (!fs.existsSync(dbPath)) {
+                continue;
+            }
+            try {
+                const db = new sqlite3.Database(dbPath, sqlite3.OPEN_READONLY);
+                const hasMismatch = await new Promise((resolve) => {
+                    db.get(`SELECT plugin_id FROM ${table} LIMIT 1`, (err, row) => {
+                        if (!err && row && row.plugin_id && row.plugin_id !== this.pluginId) {
+                            resolve(true);
+                        }
+                        else {
+                            resolve(false);
+                        }
+                    });
+                });
+                db.close((err) => {
+                    // Ignore close errors
+                });
+                if (hasMismatch) {
+                    return true;
+                }
+                // Only check first available database to avoid too many checks
+                break;
+            }
+            catch (error) {
+                // Ignore errors - database might be locked, corrupted, or table might not exist
+                continue;
+            }
+        }
+        return false;
+    }
     /**
      * Checks if existing databases have a different plugin ID (e.g., after workspace move).
      * This is informational only and does not block operation.
@@ -121,7 +186,7 @@ class MultiDbManager {
                         console.warn(`[MultiDbManager] WARNING: Found existing database (${file}) with different plugin ID (${row.plugin_id}).`);
                         console.warn(`[MultiDbManager] Current plugin ID: ${this.pluginId}`);
                         console.warn(`[MultiDbManager] This may indicate the workspace was moved or renamed.`);
-                        console.warn(`[MultiDbManager] Old data will not be accessible. Consider running full ingestion.`);
+                        console.warn(`[MultiDbManager] Old data will not be accessible. Consider running full ingestion with --cleanup flag.`);
                     }
                     db.close();
                 });
@@ -134,6 +199,82 @@ class MultiDbManager {
             }
         }
     }
+    /**
+     * Cleans up old databases with different plugin IDs.
+     * Closes all open database connections, then deletes all database files.
+     *
+     * WARNING: This will permanently delete all existing database data.
+     * Use only when you want to start fresh after workspace move/rename.
+     *
+     * Note: If databases are locked by another process (e.g., VS Code Extension),
+     * deletion will fail with a warning. The new ingestion will overwrite old data anyway.
+     *
+     * @returns Promise that resolves when cleanup is complete
+     */
+    async cleanupOldDatabases() {
+        console.log(`[MultiDbManager] Cleaning up old databases with different plugin ID...`);
+        console.log(`[MultiDbManager] Current plugin ID: ${this.pluginId}`);
+        // Close all open database connections first
+        await this.closeAll();
+        // Wait a bit to ensure file handles are released
+        await new Promise(resolve => setTimeout(resolve, 100));
+        if (!fs.existsSync(this.dbDirectory)) {
+            console.log(`[MultiDbManager] No database directory found, nothing to clean up.`);
+            return;
+        }
+        const dbFiles = [
+            'modules.db',
+            'symbols.db',
+            'dependencies.db',
+            'adrs.db',
+            'changes.db',
+            'vectors.db'
+        ];
+        let deletedCount = 0;
+        let failedCount = 0;
+        for (const file of dbFiles) {
+            const dbPath = path.join(this.dbDirectory, file);
+            if (fs.existsSync(dbPath)) {
+                try {
+                    // Try to close any open connections to this file first
+                    // (in case it was opened by checkPluginIdMismatch)
+                    fs.unlinkSync(dbPath);
+                    console.log(`[MultiDbManager] Deleted: ${file}`);
+                    deletedCount++;
+                }
+                catch (error) {
+                    if (error.code === 'EBUSY' || error.code === 'ENOENT') {
+                        // File is locked or already deleted - this is OK, new ingestion will overwrite
+                        console.warn(`[MultiDbManager] Could not delete ${file} (locked or already deleted). New ingestion will overwrite old data.`);
+                    }
+                    else {
+                        console.warn(`[MultiDbManager] Failed to delete ${file}: ${error.message}`);
+                    }
+                    failedCount++;
+                }
+            }
+        }
+        // Also try to delete any migration-related files
+        const migrationFiles = ['migrations.db', 'migration_history.db'];
+        for (const file of migrationFiles) {
+            const filePath = path.join(this.dbDirectory, file);
+            if (fs.existsSync(filePath)) {
+                try {
+                    fs.unlinkSync(filePath);
+                    console.log(`[MultiDbManager] Deleted: ${file}`);
+                }
+                catch (error) {
+                    // Ignore errors for migration files
+                }
+            }
+        }
+        if (deletedCount > 0) {
+            console.log(`[MultiDbManager] Cleanup complete: ${deletedCount} database file(s) deleted.`);
+        }
+        if (failedCount > 0) {
+            console.log(`[MultiDbManager] Note: ${failedCount} file(s) could not be deleted (may be locked by another process). New ingestion will overwrite old data.`);
+        }
+    }
     /**
      * Gets the plugin ID for this workspace.
      */

package/out/core/multi-db-manager.js.map

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package/out/core/path-normalizer.d.ts

@@ -0,0 +1,46 @@
+/**
+ * Utility class for path normalization (case-preserving).
+ *
+ * Key principles:
+ * - File paths are case-preserving on all platforms (for Git case-sensitive repositories)
+ * - Plugin IDs use lowercase normalization (via normalizeForPluginId in WorkspaceResolver)
+ * - Path comparison is case-insensitive on Windows, case-sensitive on Unix
+ */
+export declare class PathNormalizer {
+    /**
+     * Normalizes a file path (case-preserving).
+     *
+     * Rules:
+     * - Windows → Unix slashes (\ → /)
+     * - Trailing slashes entfernen
+     * - Multiple slashes vereinfachen
+     * - Case BEHALTEN (case-preserving)
+     *
+     * @param filePath Path to normalize
+     * @returns Normalized path (POSIX-style, case-preserved)
+     */
+    static normalizePath(filePath: string): string;
+    /**
+     * Cross-platform path comparison (case-insensitive on Windows, case-sensitive on Unix).
+     *
+     * @param p1 First path
+     * @param p2 Second path
+     * @returns True if paths are equal (considering platform case-sensitivity)
+     */
+    static pathsEqual(p1: string, p2: string): boolean;
+    /**
+     * Generates lookup variants for queries (forward slashes, leading slash, plugin prefixes, etc.).
+     *
+     * This is used for querying where paths might be stored with different formats:
+     * - With/without plugin prefixes (5d-database-plugin/, documentation-system-plugin/, mcp-server/)
+     * - With/without leading slashes
+     * - Different slash directions (normalized to forward slashes)
+     *
+     * Note: This is for QUERIES only, not for storage. Storage uses normalizePath().
+     *
+     * @param filePath Path to generate variants for
+     * @returns Array of path variants for query matching
+     */
+    static generateLookupVariants(filePath: string): string[];
+}
+//# sourceMappingURL=path-normalizer.d.ts.map

package/out/core/path-normalizer.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"path-normalizer.d.ts","sourceRoot":"","sources":["../../src/core/path-normalizer.ts"],"names":[],"mappings":"AAEA;;;;;;;GAOG;AACH,qBAAa,cAAc;IACvB;;;;;;;;;;;OAWG;WACW,aAAa,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM;IA4BrD;;;;;;OAMG;WACW,UAAU,CAAC,EAAE,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,GAAG,OAAO;IAazD;;;;;;;;;;;;OAYG;WACW,sBAAsB,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,EAAE;CA6CnE"}

package/out/core/path-normalizer.js

@@ -0,0 +1,152 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.PathNormalizer = void 0;
+const path = __importStar(require("path"));
+/**
+ * Utility class for path normalization (case-preserving).
+ *
+ * Key principles:
+ * - File paths are case-preserving on all platforms (for Git case-sensitive repositories)
+ * - Plugin IDs use lowercase normalization (via normalizeForPluginId in WorkspaceResolver)
+ * - Path comparison is case-insensitive on Windows, case-sensitive on Unix
+ */
+class PathNormalizer {
+    /**
+     * Normalizes a file path (case-preserving).
+     *
+     * Rules:
+     * - Windows → Unix slashes (\ → /)
+     * - Trailing slashes entfernen
+     * - Multiple slashes vereinfachen
+     * - Case BEHALTEN (case-preserving)
+     *
+     * @param filePath Path to normalize
+     * @returns Normalized path (POSIX-style, case-preserved)
+     */
+    static normalizePath(filePath) {
+        if (!filePath) {
+            return '';
+        }
+        // Resolve to absolute path (normalizes . and ..)
+        const resolved = path.resolve(filePath);
+        // Convert backslashes to forward slashes (Windows → Unix)
+        let normalized = resolved.replace(/\\/g, '/');
+        // Remove trailing slashes (except root path)
+        if (normalized.length > 1 && normalized.endsWith('/')) {
+            normalized = normalized.slice(0, -1);
+        }
+        // Simplify multiple slashes (but preserve leading // for UNC paths)
+        if (normalized.startsWith('//')) {
+            // UNC path (\\server\share) - keep double slash, simplify rest
+            normalized = '//' + normalized.substring(2).replace(/\/+/g, '/');
+        }
+        else {
+            normalized = normalized.replace(/\/+/g, '/');
+        }
+        // Case is preserved - NO toLowerCase()!
+        return normalized;
+    }
+    /**
+     * Cross-platform path comparison (case-insensitive on Windows, case-sensitive on Unix).
+     *
+     * @param p1 First path
+     * @param p2 Second path
+     * @returns True if paths are equal (considering platform case-sensitivity)
+     */
+    static pathsEqual(p1, p2) {
+        const normalized1 = this.normalizePath(p1);
+        const normalized2 = this.normalizePath(p2);
+        if (process.platform === 'win32') {
+            // Case-insensitive comparison on Windows
+            return normalized1.toLowerCase() === normalized2.toLowerCase();
+        }
+        else {
+            // Case-sensitive comparison on Unix
+            return normalized1 === normalized2;
+        }
+    }
+    /**
+     * Generates lookup variants for queries (forward slashes, leading slash, plugin prefixes, etc.).
+     *
+     * This is used for querying where paths might be stored with different formats:
+     * - With/without plugin prefixes (5d-database-plugin/, documentation-system-plugin/, mcp-server/)
+     * - With/without leading slashes
+     * - Different slash directions (normalized to forward slashes)
+     *
+     * Note: This is for QUERIES only, not for storage. Storage uses normalizePath().
+     *
+     * @param filePath Path to generate variants for
+     * @returns Array of path variants for query matching
+     */
+    static generateLookupVariants(filePath) {
+        const variants = [];
+        // Normalize separators to forward slashes (case-preserving)
+        let normalized = filePath.replace(/\\/g, '/');
+        variants.push(normalized);
+        // Remove leading slashes
+        const withoutLeadingSlash = normalized.replace(/^\/+/, '');
+        if (withoutLeadingSlash !== normalized) {
+            variants.push(withoutLeadingSlash);
+        }
+        const pluginPrefixes = ['5d-database-plugin/', 'documentation-system-plugin/', 'mcp-server/'];
+        // Remove common plugin prefixes (e.g., "5d-database-plugin/")
+        for (const prefix of pluginPrefixes) {
+            if (normalized.startsWith(prefix)) {
+                const withoutPrefix = normalized.substring(prefix.length);
+                variants.push(withoutPrefix);
+            }
+            // Also try without leading slash
+            if (withoutLeadingSlash.startsWith(prefix)) {
+                const withoutPrefix = withoutLeadingSlash.substring(prefix.length);
+                variants.push(withoutPrefix);
+            }
+        }
+        // ADD variants WITH plugin prefixes (if path doesn't already have one)
+        // This handles cases where modules are stored with plugin prefix but queried without
+        const hasPluginPrefix = pluginPrefixes.some(prefix => normalized.startsWith(prefix) || withoutLeadingSlash.startsWith(prefix));
+        if (!hasPluginPrefix) {
+            // Add variants with each plugin prefix
+            for (const prefix of pluginPrefixes) {
+                variants.push(`${prefix}${withoutLeadingSlash}`);
+                variants.push(`${prefix}${normalized}`);
+            }
+        }
+        // Remove duplicates and return (preserve order)
+        return Array.from(new Set(variants));
+    }
+}
+exports.PathNormalizer = PathNormalizer;
+//# sourceMappingURL=path-normalizer.js.map

package/out/core/path-normalizer.js.map

@@ -0,0 +1 @@
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package/out/core/vector-database-factory.js

@@ -26,12 +26,12 @@ class VectorDatabaseFactory {
             try {
                 await vssDb.initialize();
                 if (vssDb.isAvailable()) {
-                    console.log(`[VectorDatabaseFactory] Using VSS Vector Database (${platform}-${arch})`);
+                    // Removed console.log to prevent stdout interference with MCP JSON-RPC protocol
                     return vssDb;
                 }
             }
             catch (error) {
-                console.warn(`[VectorDatabaseFactory] VSS initialization failed: ${error}. Will use fallback.`);
+                // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
             }
         }
         // Windows: Use ChromaDB
@@ -40,16 +40,16 @@ class VectorDatabaseFactory {
             try {
                 await chromaDb.initialize();
                 if (chromaDb.isAvailable()) {
-                    console.log(`[VectorDatabaseFactory] Using ChromaDB Vector Database (${platform}-${arch})`);
+                    // Removed console.log to prevent stdout interference with MCP JSON-RPC protocol
                     return chromaDb;
                 }
             }
             catch (error) {
-                console.warn(`[VectorDatabaseFactory] ChromaDB initialization failed: ${error}. Will use fallback.`);
+                // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
             }
         }
         // Fallback: Use VSS (will fallback to cosine similarity if VSS not available)
-        console.warn(`[VectorDatabaseFactory] Optimized vector database not available. Using VSS with fallback to cosine similarity.`);
+        // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
         const vssDb = new vss_vector_database_1.VssVectorDatabase(db, vssLoader);
         await vssDb.initialize(); // Will fail gracefully on Windows
         return vssDb;

package/out/core/vector-database-factory.js.map

@@ -1 +1 @@
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+{"version":3,"file":"vector-database-factory.js","sourceRoot":"","sources":["../../src/core/vector-database-factory.ts"],"names":[],"mappings":";;;AAGA,+DAA0D;AAC1D,yEAAoE;AAGpE;;;GAGG;AACH,MAAa,qBAAqB;IAC9B;;;;;;;OAOG;IACH,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,EAAoB,EAAE,SAAoB,EAAE,aAAqB;QACjF,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAQ,CAAC;QAClC,MAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC;QAE1B,2BAA2B;QAC3B,IAAI,QAAQ,KAAK,QAAQ,IAAI,QAAQ,KAAK,OAAO,EAAE,CAAC;YAChD,MAAM,KAAK,GAAG,IAAI,uCAAiB,CAAC,EAAE,EAAE,SAAS,CAAC,CAAC;YAEnD,wBAAwB;YACxB,IAAI,CAAC;gBACD,MAAM,KAAK,CAAC,UAAU,EAAE,CAAC;gBACzB,IAAI,KAAK,CAAC,WAAW,EAAE,EAAE,CAAC;oBACtB,gFAAgF;oBAChF,OAAO,KAAK,CAAC;gBACjB,CAAC;YACL,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACb,iFAAiF;YACrF,CAAC;QACL,CAAC;QAED,wBAAwB;QACxB,IAAI,QAAQ,KAAK,OAAO,EAAE,CAAC;YACvB,MAAM,QAAQ,GAAG,IAAI,iDAAsB,CAAC,EAAE,EAAE,aAAa,CAAC,CAAC;YAE/D,IAAI,CAAC;gBACD,MAAM,QAAQ,CAAC,UAAU,EAAE,CAAC;gBAC5B,IAAI,QAAQ,CAAC,WAAW,EAAE,EAAE,CAAC;oBACzB,gFAAgF;oBAChF,OAAO,QAAQ,CAAC;gBACpB,CAAC;YACL,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACb,iFAAiF;YACrF,CAAC;QACL,CAAC;QAED,8EAA8E;QAC9E,iFAAiF;QACjF,MAAM,KAAK,GAAG,IAAI,uCAAiB,CAAC,EAAE,EAAE,SAAS,CAAC,CAAC;QACnD,MAAM,KAAK,CAAC,UAAU,EAAE,CAAC,CAAC,kCAAkC;QAC5D,OAAO,KAAK,CAAC;IACjB,CAAC;IAED;;;;OAIG;IACH,MAAM,CAAC,4BAA4B;QAC/B,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAQ,CAAC;QAElC,sCAAsC;QACtC,IAAI,QAAQ,KAAK,QAAQ,IAAI,QAAQ,KAAK,OAAO,EAAE,CAAC;YAChD,OAAO,IAAI,CAAC;QAChB,CAAC;QAED,kDAAkD;QAClD,IAAI,QAAQ,KAAK,OAAO,EAAE,CAAC;YACvB,IAAI,CAAC;gBACD,OAAO,CAAC,UAAU,CAAC,CAAC;gBACpB,OAAO,IAAI,CAAC;YAChB,CAAC;YAAC,MAAM,CAAC;gBACL,OAAO,KAAK,CAAC;YACjB,CAAC;QACL,CAAC;QAED,OAAO,KAAK,CAAC;IACjB,CAAC;CACJ;AA5ED,sDA4EC"}

package/out/core/vss-vector-database.js

@@ -29,7 +29,7 @@ class VssVectorDatabase {
         // Check if VSS is available
         this.vssAvailable = this.vssLoader.isAvailable();
         if (!this.vssAvailable) {
-            console.warn('[VssVectorDatabase] VSS extension not available. Using fallback cosine similarity.');
+            // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
             return;
         }
         try {
@@ -38,15 +38,15 @@ class VssVectorDatabase {
             if (!tableExists) {
                 // Create VSS virtual table
                 await this.createVirtualTable();
-                console.log('[VssVectorDatabase] Created embeddings_vss virtual table.');
+                // Removed console.log to prevent stdout interference with MCP JSON-RPC protocol
             }
             else {
-                console.log('[VssVectorDatabase] embeddings_vss virtual table already exists.');
+                // Removed console.log to prevent stdout interference with MCP JSON-RPC protocol
             }
         }
         catch (error) {
             const errorMsg = error instanceof Error ? error.message : String(error);
-            console.warn(`[VssVectorDatabase] Failed to initialize VSS virtual table: ${errorMsg}. Using fallback cosine similarity.`);
+            // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
             this.vssAvailable = false;
         }
     }
@@ -183,7 +183,7 @@ class VssVectorDatabase {
             }
             const rowid = await this.getRowidFromEmbeddingId(embeddingId);
             if (rowid === null) {
-                console.warn(`[VssVectorDatabase] Embedding ${embeddingId} not found in embeddings table`);
+                // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
                 return;
             }
             const exists = await this.checkRowExists(rowid);
@@ -194,7 +194,7 @@ class VssVectorDatabase {
         }
         catch (error) {
             const errorMsg = error instanceof Error ? error.message : String(error);
-            console.warn(`[VssVectorDatabase] Failed to upsert embedding in VSS: ${errorMsg}`);
+            // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
         }
     }
     /**
@@ -202,7 +202,7 @@ class VssVectorDatabase {
      */
     async search(queryEmbedding, limit = 10, dimension, pluginId) {
         if (!this.vssAvailable) {
-            console.warn('[VssVectorDatabase] VSS not available, cannot perform VSS search.');
+            // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
             return [];
         }
         // Convert query embedding to array format
@@ -266,7 +266,7 @@ class VssVectorDatabase {
             this.db.all(query, params, (err, rows) => {
                 if (err) {
                     // If this also fails, return empty array (fallback to cosine similarity)
-                    console.warn(`[VssVectorDatabase] VSS search failed: ${err.message}. Falling back to cosine similarity.`);
+                    // Removed console.warn to prevent stdout interference with MCP JSON-RPC protocol
                     resolve([]);
                 }
                 else {