@noatgnu/cupcake-vanilla 1.2.9 → 1.2.11
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/fesm2022/noatgnu-cupcake-vanilla.mjs +1243 -3
- package/fesm2022/noatgnu-cupcake-vanilla.mjs.map +1 -1
- package/index.d.ts +435 -240
- package/package.json +1 -1
package/index.d.ts
CHANGED
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@@ -1,4 +1,4 @@
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1
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-
import * as
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+
import * as _angular_core from '@angular/core';
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import { OnInit, EventEmitter, OnDestroy } from '@angular/core';
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import { Observable, OperatorFunction } from 'rxjs';
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import { BaseApiService, WebSocketService, AuthService, WebSocketMessage, NotificationService as NotificationService$1, ToastService, User, LabGroupService, LabGroup, LabGroupQueryResponse, ResourceVisibility } from '@noatgnu/cupcake-core';
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@@ -65,6 +65,100 @@ declare enum ColumnType {
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SPECIAL = "special"
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}
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interface MetadataColumnModifier {
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samples: string;
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value: string;
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}
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interface MetadataColumn extends BaseTimestampedModel {
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id: number;
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metadataTable: number;
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metadataTableName?: string;
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template?: number;
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templateName?: string;
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name: string;
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type: string;
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columnPosition: number;
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value?: string;
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notApplicable: boolean;
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mandatory: boolean;
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hidden: boolean;
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autoGenerated: boolean;
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readonly: boolean;
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modifiers: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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suggestedValues: any[];
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enableTypeahead: boolean;
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possibleDefaultValues: any[];
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staffOnly: boolean;
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}
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interface MetadataColumnCreateRequest {
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metadataTable: number;
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template?: number;
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name: string;
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type: string;
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columnPosition?: number;
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value?: string;
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notApplicable?: boolean;
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mandatory?: boolean;
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hidden?: boolean;
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autoGenerated?: boolean;
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readonly?: boolean;
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modifiers?: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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enableTypeahead?: boolean;
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staffOnly?: boolean;
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}
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interface MetadataColumnUpdateRequest {
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name?: string;
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type?: string;
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columnPosition?: number;
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value?: string;
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notApplicable?: boolean;
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mandatory?: boolean;
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hidden?: boolean;
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autoGenerated?: boolean;
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readonly?: boolean;
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modifiers?: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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enableTypeahead?: boolean;
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staffOnly?: boolean;
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}
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+
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interface SamplePool extends BaseTimestampedModel {
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id: number;
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poolName: string;
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poolDescription?: string;
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pooledOnlySamples: number[];
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pooledAndIndependentSamples: number[];
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isReference: boolean;
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sdrfValue?: string;
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metadataTable: number;
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metadataTableName?: string;
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totalSamples?: number;
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allSampleIndices?: number[];
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metadataColumns: MetadataColumn[];
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}
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interface SamplePoolCreateRequest {
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poolName: string;
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poolDescription?: string;
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pooledOnlySamples?: number[];
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pooledAndIndependentSamples?: number[];
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isReference?: boolean;
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sdrfValue?: string;
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metadataTable: number;
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}
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interface SamplePoolUpdateRequest {
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poolName?: string;
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poolDescription?: string;
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pooledOnlySamples?: number[];
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pooledAndIndependentSamples?: number[];
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isReference?: boolean;
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sdrfValue?: string;
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}
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+
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interface MetadataTable extends BaseTimestampedModel {
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id: number;
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name: string;
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@@ -80,8 +174,8 @@ interface MetadataTable extends BaseTimestampedModel {
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visibility: 'private' | 'group' | 'public';
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contentType?: number;
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objectId?: number;
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-
columns?:
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samplePools?:
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columns?: MetadataColumn[];
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samplePools?: SamplePool[];
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columnCount?: number;
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sampleRange?: string;
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canEdit?: boolean;
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@@ -147,68 +241,6 @@ interface MetadataTableQueryResponse {
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results: MetadataTable[];
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}
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interface MetadataColumnModifier {
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samples: string;
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value: string;
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}
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interface MetadataColumn extends BaseTimestampedModel {
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id: number;
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metadataTable: number;
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metadataTableName?: string;
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template?: number;
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templateName?: string;
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name: string;
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type: string;
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columnPosition: number;
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value?: string;
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notApplicable: boolean;
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mandatory: boolean;
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hidden: boolean;
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autoGenerated: boolean;
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readonly: boolean;
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modifiers: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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suggestedValues: any[];
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enableTypeahead: boolean;
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possibleDefaultValues: any[];
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staffOnly: boolean;
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}
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interface MetadataColumnCreateRequest {
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metadataTable: number;
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template?: number;
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name: string;
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type: string;
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columnPosition?: number;
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value?: string;
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notApplicable?: boolean;
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mandatory?: boolean;
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hidden?: boolean;
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autoGenerated?: boolean;
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readonly?: boolean;
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modifiers?: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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enableTypeahead?: boolean;
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staffOnly?: boolean;
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}
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interface MetadataColumnUpdateRequest {
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name?: string;
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type?: string;
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columnPosition?: number;
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value?: string;
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notApplicable?: boolean;
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mandatory?: boolean;
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hidden?: boolean;
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autoGenerated?: boolean;
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readonly?: boolean;
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modifiers?: MetadataColumnModifier[];
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ontologyType?: OntologyType;
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ontologyOptions?: any;
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enableTypeahead?: boolean;
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staffOnly?: boolean;
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}
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-
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interface MetadataColumnTemplate extends BaseTimestampedModel {
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id: number;
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name: string;
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@@ -289,38 +321,6 @@ interface MetadataColumnTemplateShareCreateRequest {
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canEdit?: boolean;
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}
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interface SamplePool extends BaseTimestampedModel {
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id: number;
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poolName: string;
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poolDescription?: string;
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pooledOnlySamples: number[];
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pooledAndIndependentSamples: number[];
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isReference: boolean;
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sdrfValue?: string;
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metadataTable: number;
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metadataTableName?: string;
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totalSamples?: number;
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allSampleIndices?: number[];
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metadataColumns: MetadataColumn[];
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}
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interface SamplePoolCreateRequest {
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poolName: string;
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poolDescription?: string;
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pooledOnlySamples?: number[];
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pooledAndIndependentSamples?: number[];
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isReference?: boolean;
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sdrfValue?: string;
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metadataTable: number;
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}
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interface SamplePoolUpdateRequest {
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poolName?: string;
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poolDescription?: string;
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pooledOnlySamples?: number[];
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pooledAndIndependentSamples?: number[];
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isReference?: boolean;
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sdrfValue?: string;
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}
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interface MetadataTableTemplate extends BaseTimestampedModel {
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id: number;
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name: string;
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@@ -871,8 +871,8 @@ declare class MetadataTableService extends BaseApiService {
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newSampleCount: number;
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cleanupPerformed: boolean;
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}>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataTableService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataTableService>;
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}
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interface MetadataColumnQueryParams {
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@@ -989,8 +989,8 @@ declare class MetadataColumnService extends BaseApiService {
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columnType: string;
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detectedOntologyType: string;
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}>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataColumnService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataColumnService>;
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}
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interface SamplePoolQueryParams {
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@@ -1030,8 +1030,8 @@ declare class SamplePoolService extends BaseApiService {
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* Get metadata columns associated with this pool
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*/
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getMetadataColumns(id: number): Observable<MetadataColumn[]>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<SamplePoolService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<SamplePoolService>;
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}
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interface MetadataTableTemplateQueryParams {
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@@ -1194,8 +1194,8 @@ declare class MetadataTableTemplateService extends BaseApiService {
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description?: string;
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sampleCount: number;
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}): Observable<MetadataTable>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataTableTemplateService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataTableTemplateService>;
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}
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interface FavouriteMetadataOptionQueryParams {
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@@ -1234,8 +1234,8 @@ declare class FavouriteMetadataOptionService extends BaseApiService {
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* Delete a favourite metadata option
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*/
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deleteFavouriteMetadataOption(id: number): Observable<void>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<FavouriteMetadataOptionService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<FavouriteMetadataOptionService>;
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}
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interface MetadataColumnTemplateQueryParams {
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@@ -1330,8 +1330,8 @@ declare class MetadataColumnTemplateService extends BaseApiService {
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customFilters: any;
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hasMore: boolean;
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}>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataColumnTemplateService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataColumnTemplateService>;
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}
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interface MetadataColumnTemplateShareQueryParams {
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@@ -1366,8 +1366,8 @@ declare class MetadataColumnTemplateShareService extends BaseApiService {
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* Delete a template share
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*/
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deleteMetadataColumnTemplateShare(id: number): Observable<void>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataColumnTemplateShareService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataColumnTemplateShareService>;
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}
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declare class MetadataManagementService extends BaseApiService {
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@@ -1391,24 +1391,24 @@ declare class MetadataManagementService extends BaseApiService {
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* Export metadata as SDRF file (matching original CUPCAKE)
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*/
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exportSdrfFile(request: any): Observable<Blob>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataManagementService, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<MetadataManagementService>;
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}
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declare class Websocket extends WebSocketService {
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constructor(authService: AuthService);
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getMetadataTableUpdates(): Observable<WebSocketMessage>;
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getLabGroupUpdates(): Observable<WebSocketMessage>;
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static ɵfac:
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static ɵprov:
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static ɵfac: _angular_core.ɵɵFactoryDeclaration<Websocket, never>;
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static ɵprov: _angular_core.ɵɵInjectableDeclaration<Websocket>;
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}
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declare class AdminWebSocketService extends WebSocketService {
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constructor(authService: AuthService);
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getAdminNotifications(): Observable<WebSocketMessage>;
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getSystemNotifications(): Observable<WebSocketMessage>;
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static ɵfac:
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static ɵprov:
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|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AdminWebSocketService, never>;
|
|
1411
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AdminWebSocketService>;
|
|
1412
1412
|
}
|
|
1413
1413
|
|
|
1414
1414
|
declare enum NotificationType {
|
|
@@ -1425,8 +1425,8 @@ declare class NotificationService extends NotificationService$1 {
|
|
|
1425
1425
|
private adminWebSocketService;
|
|
1426
1426
|
private isConnected;
|
|
1427
1427
|
private isAdminConnected;
|
|
1428
|
-
readonly isWebSocketConnected:
|
|
1429
|
-
readonly isAdminWebSocketConnected:
|
|
1428
|
+
readonly isWebSocketConnected: _angular_core.Signal<boolean>;
|
|
1429
|
+
readonly isAdminWebSocketConnected: _angular_core.Signal<boolean>;
|
|
1430
1430
|
constructor(websocketService: Websocket, adminWebSocketService: AdminWebSocketService, toastService: ToastService);
|
|
1431
1431
|
private initializeWebSocket;
|
|
1432
1432
|
private setupNotificationHandlers;
|
|
@@ -1441,8 +1441,8 @@ declare class NotificationService extends NotificationService$1 {
|
|
|
1441
1441
|
disconnectAdmin(): void;
|
|
1442
1442
|
subscribeToMetadataTable(tableId: number): void;
|
|
1443
1443
|
createVanillaNotification(type: NotificationType, title: string, message: string, level?: 'info' | 'success' | 'warning' | 'error', autoClose?: boolean): void;
|
|
1444
|
-
static ɵfac:
|
|
1445
|
-
static ɵprov:
|
|
1444
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<NotificationService, never>;
|
|
1445
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<NotificationService>;
|
|
1446
1446
|
}
|
|
1447
1447
|
|
|
1448
1448
|
interface OntologySuggestParams {
|
|
@@ -1487,8 +1487,8 @@ declare class OntologySearchService extends BaseApiService {
|
|
|
1487
1487
|
* Search specific ontology type
|
|
1488
1488
|
*/
|
|
1489
1489
|
searchType(query: string, ontologyType: string, limit?: number): Observable<OntologySuggestResponse>;
|
|
1490
|
-
static ɵfac:
|
|
1491
|
-
static ɵprov:
|
|
1490
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<OntologySearchService, never>;
|
|
1491
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<OntologySearchService>;
|
|
1492
1492
|
}
|
|
1493
1493
|
|
|
1494
1494
|
interface SchemaQueryParams {
|
|
@@ -1519,8 +1519,8 @@ declare class SchemaService extends BaseApiService {
|
|
|
1519
1519
|
message: string;
|
|
1520
1520
|
synced_count: number;
|
|
1521
1521
|
}>;
|
|
1522
|
-
static ɵfac:
|
|
1523
|
-
static ɵprov:
|
|
1522
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SchemaService, never>;
|
|
1523
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<SchemaService>;
|
|
1524
1524
|
}
|
|
1525
1525
|
|
|
1526
1526
|
declare class SDRFDefaultsService extends BaseApiService {
|
|
@@ -1592,8 +1592,8 @@ declare class SDRFDefaultsService extends BaseApiService {
|
|
|
1592
1592
|
* Get quick access to commonly used value categories
|
|
1593
1593
|
*/
|
|
1594
1594
|
getQuickValues(): Observable<any>;
|
|
1595
|
-
static ɵfac:
|
|
1596
|
-
static ɵprov:
|
|
1595
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SDRFDefaultsService, never>;
|
|
1596
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<SDRFDefaultsService>;
|
|
1597
1597
|
}
|
|
1598
1598
|
|
|
1599
1599
|
declare class AsyncTaskService extends BaseApiService {
|
|
@@ -1619,8 +1619,8 @@ declare class AsyncTaskService extends BaseApiService {
|
|
|
1619
1619
|
* Direct download endpoint (returns blob for file download)
|
|
1620
1620
|
*/
|
|
1621
1621
|
downloadTaskFile(id: string, token: string): Observable<Blob>;
|
|
1622
|
-
static ɵfac:
|
|
1623
|
-
static ɵprov:
|
|
1622
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AsyncTaskService, never>;
|
|
1623
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AsyncTaskService>;
|
|
1624
1624
|
}
|
|
1625
1625
|
|
|
1626
1626
|
declare class AsyncExportService extends BaseApiService {
|
|
@@ -1628,8 +1628,8 @@ declare class AsyncExportService extends BaseApiService {
|
|
|
1628
1628
|
sdrfFile(request: MetadataExportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1629
1629
|
multipleSdrfFiles(request: BulkExportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1630
1630
|
multipleExcelTemplates(request: BulkExcelExportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1631
|
-
static ɵfac:
|
|
1632
|
-
static ɵprov:
|
|
1631
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AsyncExportService, never>;
|
|
1632
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AsyncExportService>;
|
|
1633
1633
|
}
|
|
1634
1634
|
|
|
1635
1635
|
declare class ChunkedUploadService extends BaseApiService {
|
|
@@ -1664,8 +1664,8 @@ declare class ChunkedUploadService extends BaseApiService {
|
|
|
1664
1664
|
uploadSessionId?: string;
|
|
1665
1665
|
onProgress?: (progress: number) => void;
|
|
1666
1666
|
}): Observable<ChunkedUploadCompletionResponse>;
|
|
1667
|
-
static ɵfac:
|
|
1668
|
-
static ɵprov:
|
|
1667
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ChunkedUploadService, never>;
|
|
1668
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<ChunkedUploadService>;
|
|
1669
1669
|
}
|
|
1670
1670
|
|
|
1671
1671
|
declare class AsyncImportService extends BaseApiService {
|
|
@@ -1673,14 +1673,14 @@ declare class AsyncImportService extends BaseApiService {
|
|
|
1673
1673
|
constructor(chunkedUploadService: ChunkedUploadService);
|
|
1674
1674
|
sdrfFile(request: MetadataImportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1675
1675
|
excelFile(request: MetadataImportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1676
|
-
static ɵfac:
|
|
1677
|
-
static ɵprov:
|
|
1676
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AsyncImportService, never>;
|
|
1677
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AsyncImportService>;
|
|
1678
1678
|
}
|
|
1679
1679
|
|
|
1680
1680
|
declare class AsyncValidationService extends BaseApiService {
|
|
1681
1681
|
metadataTable(request: MetadataValidationRequest): Observable<AsyncTaskCreateResponse>;
|
|
1682
|
-
static ɵfac:
|
|
1683
|
-
static ɵprov:
|
|
1682
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AsyncValidationService, never>;
|
|
1683
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AsyncValidationService>;
|
|
1684
1684
|
}
|
|
1685
1685
|
|
|
1686
1686
|
interface ChunkedFileImportRequest {
|
|
@@ -1736,8 +1736,8 @@ declare class ChunkedImportService extends BaseApiService {
|
|
|
1736
1736
|
* This uses the new backend endpoint that processes already uploaded chunks
|
|
1737
1737
|
*/
|
|
1738
1738
|
processChunkedUpload(request: ChunkedImportRequest): Observable<AsyncTaskCreateResponse>;
|
|
1739
|
-
static ɵfac:
|
|
1740
|
-
static ɵprov:
|
|
1739
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ChunkedImportService, never>;
|
|
1740
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<ChunkedImportService>;
|
|
1741
1741
|
}
|
|
1742
1742
|
|
|
1743
1743
|
interface AgeFormat {
|
|
@@ -1823,8 +1823,8 @@ declare class SdrfSyntaxService {
|
|
|
1823
1823
|
private validateSpikedCompound;
|
|
1824
1824
|
getPooledSampleValues(): string[];
|
|
1825
1825
|
getSyntheticPeptideValues(): string[];
|
|
1826
|
-
static ɵfac:
|
|
1827
|
-
static ɵprov:
|
|
1826
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SdrfSyntaxService, never>;
|
|
1827
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<SdrfSyntaxService>;
|
|
1828
1828
|
}
|
|
1829
1829
|
|
|
1830
1830
|
interface ElectronAPI {
|
|
@@ -1869,8 +1869,8 @@ declare class ElectronService {
|
|
|
1869
1869
|
isBackendReady(): Promise<boolean>;
|
|
1870
1870
|
onBackendStatusChange(): Observable<any>;
|
|
1871
1871
|
onWindowStateChange(): Observable<'maximized' | 'unmaximized'>;
|
|
1872
|
-
static ɵfac:
|
|
1873
|
-
static ɵprov:
|
|
1872
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ElectronService, never>;
|
|
1873
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<ElectronService>;
|
|
1874
1874
|
}
|
|
1875
1875
|
|
|
1876
1876
|
declare class SdrfAgeInput implements OnInit {
|
|
@@ -1883,8 +1883,8 @@ declare class SdrfAgeInput implements OnInit {
|
|
|
1883
1883
|
ngOnInit(): void;
|
|
1884
1884
|
private parseAndSetValue;
|
|
1885
1885
|
private updateValue;
|
|
1886
|
-
static ɵfac:
|
|
1887
|
-
static ɵcmp:
|
|
1886
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SdrfAgeInput, never>;
|
|
1887
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<SdrfAgeInput, "ccv-sdrf-age-input", never, { "value": { "alias": "value"; "required": false; }; }, { "valueChange": "valueChange"; }, never, never, true, never>;
|
|
1888
1888
|
}
|
|
1889
1889
|
|
|
1890
1890
|
declare class SdrfModificationInput implements OnInit {
|
|
@@ -1892,7 +1892,7 @@ declare class SdrfModificationInput implements OnInit {
|
|
|
1892
1892
|
templateId: number | null;
|
|
1893
1893
|
columnId: number | null;
|
|
1894
1894
|
valueChange: EventEmitter<string>;
|
|
1895
|
-
searchType:
|
|
1895
|
+
searchType: _angular_core.WritableSignal<"icontains" | "istartswith">;
|
|
1896
1896
|
private fb;
|
|
1897
1897
|
private sdrfSyntax;
|
|
1898
1898
|
private metadataColumnService;
|
|
@@ -1900,14 +1900,14 @@ declare class SdrfModificationInput implements OnInit {
|
|
|
1900
1900
|
modificationForm: FormGroup;
|
|
1901
1901
|
modificationTypes: string[];
|
|
1902
1902
|
positions: string[];
|
|
1903
|
-
selectedUnimodData:
|
|
1904
|
-
availableSpecifications:
|
|
1903
|
+
selectedUnimodData: _angular_core.WritableSignal<UnimodFullData | null>;
|
|
1904
|
+
availableSpecifications: _angular_core.WritableSignal<(UnimodSpecification & {
|
|
1905
1905
|
specNumber: string;
|
|
1906
1906
|
})[]>;
|
|
1907
|
-
selectedSpecification:
|
|
1908
|
-
showSpecifications:
|
|
1909
|
-
showHiddenSpecifications:
|
|
1910
|
-
hiddenSpecificationCount:
|
|
1907
|
+
selectedSpecification: _angular_core.WritableSignal<string | null>;
|
|
1908
|
+
showSpecifications: _angular_core.WritableSignal<boolean>;
|
|
1909
|
+
showHiddenSpecifications: _angular_core.WritableSignal<boolean>;
|
|
1910
|
+
hiddenSpecificationCount: _angular_core.WritableSignal<number>;
|
|
1911
1911
|
ngOnInit(): void;
|
|
1912
1912
|
private parseAndSetValue;
|
|
1913
1913
|
private getStringValue;
|
|
@@ -1926,8 +1926,8 @@ declare class SdrfModificationInput implements OnInit {
|
|
|
1926
1926
|
onSearchTypeChange(type: 'icontains' | 'istartswith'): void;
|
|
1927
1927
|
private updateAvailableSpecifications;
|
|
1928
1928
|
toggleHiddenSpecifications(): void;
|
|
1929
|
-
static ɵfac:
|
|
1930
|
-
static ɵcmp:
|
|
1929
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SdrfModificationInput, never>;
|
|
1930
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<SdrfModificationInput, "ccv-sdrf-modification-input", never, { "value": { "alias": "value"; "required": false; }; "templateId": { "alias": "templateId"; "required": false; }; "columnId": { "alias": "columnId"; "required": false; }; }, { "valueChange": "valueChange"; }, never, never, true, never>;
|
|
1931
1931
|
}
|
|
1932
1932
|
|
|
1933
1933
|
declare class SdrfSpikedCompoundInput implements OnInit {
|
|
@@ -1943,8 +1943,8 @@ declare class SdrfSpikedCompoundInput implements OnInit {
|
|
|
1943
1943
|
private updateValue;
|
|
1944
1944
|
get showProteinFields(): boolean;
|
|
1945
1945
|
get showPeptideFields(): boolean;
|
|
1946
|
-
static ɵfac:
|
|
1947
|
-
static ɵcmp:
|
|
1946
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SdrfSpikedCompoundInput, never>;
|
|
1947
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<SdrfSpikedCompoundInput, "ccv-sdrf-spiked-compound-input", never, { "value": { "alias": "value"; "required": false; }; }, { "valueChange": "valueChange"; }, never, never, true, never>;
|
|
1948
1948
|
}
|
|
1949
1949
|
|
|
1950
1950
|
declare class SdrfCleavageInput implements OnInit {
|
|
@@ -1952,7 +1952,7 @@ declare class SdrfCleavageInput implements OnInit {
|
|
|
1952
1952
|
templateId: number | null;
|
|
1953
1953
|
columnId: number | null;
|
|
1954
1954
|
valueChange: EventEmitter<string>;
|
|
1955
|
-
searchType:
|
|
1955
|
+
searchType: _angular_core.WritableSignal<"icontains" | "istartswith">;
|
|
1956
1956
|
private fb;
|
|
1957
1957
|
private sdrfSyntax;
|
|
1958
1958
|
private metadataColumnService;
|
|
@@ -1966,8 +1966,8 @@ declare class SdrfCleavageInput implements OnInit {
|
|
|
1966
1966
|
formatOntologySuggestion: (suggestion: OntologySuggestion) => string;
|
|
1967
1967
|
onOntologySuggestionSelected: (event: any) => void;
|
|
1968
1968
|
onSearchTypeChange(type: 'icontains' | 'istartswith'): void;
|
|
1969
|
-
static ɵfac:
|
|
1970
|
-
static ɵcmp:
|
|
1969
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SdrfCleavageInput, never>;
|
|
1970
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<SdrfCleavageInput, "ccv-sdrf-cleavage-input", never, { "value": { "alias": "value"; "required": false; }; "templateId": { "alias": "templateId"; "required": false; }; "columnId": { "alias": "columnId"; "required": false; }; }, { "valueChange": "valueChange"; }, never, never, true, never>;
|
|
1971
1971
|
}
|
|
1972
1972
|
|
|
1973
1973
|
interface MetadataValueEditConfig {
|
|
@@ -2005,23 +2005,23 @@ declare class MetadataValueEditModal implements OnInit {
|
|
|
2005
2005
|
sampleIndices: number[];
|
|
2006
2006
|
}>;
|
|
2007
2007
|
editForm: FormGroup;
|
|
2008
|
-
isLoading:
|
|
2009
|
-
isLoadingSuggestions:
|
|
2010
|
-
searchType:
|
|
2011
|
-
isLoadingFavorites:
|
|
2012
|
-
userFavorites:
|
|
2013
|
-
labGroupFavorites:
|
|
2014
|
-
globalFavorites:
|
|
2015
|
-
selectedFavorite:
|
|
2016
|
-
currentUser:
|
|
2017
|
-
userLabGroups:
|
|
2008
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2009
|
+
isLoadingSuggestions: _angular_core.WritableSignal<boolean>;
|
|
2010
|
+
searchType: _angular_core.WritableSignal<"icontains" | "istartswith">;
|
|
2011
|
+
isLoadingFavorites: _angular_core.WritableSignal<boolean>;
|
|
2012
|
+
userFavorites: _angular_core.WritableSignal<FavouriteMetadataOption[]>;
|
|
2013
|
+
labGroupFavorites: _angular_core.WritableSignal<FavouriteMetadataOption[]>;
|
|
2014
|
+
globalFavorites: _angular_core.WritableSignal<FavouriteMetadataOption[]>;
|
|
2015
|
+
selectedFavorite: _angular_core.WritableSignal<FavouriteMetadataOption | null>;
|
|
2016
|
+
currentUser: _angular_core.WritableSignal<User | null>;
|
|
2017
|
+
userLabGroups: _angular_core.WritableSignal<number[]>;
|
|
2018
2018
|
activeFavoritesTab: 'user' | 'lab_group' | 'global';
|
|
2019
2019
|
private sdrfSyntaxService;
|
|
2020
|
-
specialSyntaxType:
|
|
2021
|
-
showSpecialInput:
|
|
2022
|
-
specialInputValue:
|
|
2023
|
-
selectedSampleIndices:
|
|
2024
|
-
showSamplePanel:
|
|
2020
|
+
specialSyntaxType: _angular_core.WritableSignal<SyntaxType | null>;
|
|
2021
|
+
showSpecialInput: _angular_core.WritableSignal<boolean>;
|
|
2022
|
+
specialInputValue: _angular_core.WritableSignal<string>;
|
|
2023
|
+
selectedSampleIndices: _angular_core.WritableSignal<Set<number>>;
|
|
2024
|
+
showSamplePanel: _angular_core.WritableSignal<boolean>;
|
|
2025
2025
|
constructor(fb: FormBuilder, activeModal: NgbActiveModal, authService: AuthService, favouriteMetadataOptionService: FavouriteMetadataOptionService, metadataColumnService: MetadataColumnService, metadataColumnTemplateService: MetadataColumnTemplateService, labGroupService: LabGroupService, ontologySearchService: OntologySearchService);
|
|
2026
2026
|
ngOnInit(): void;
|
|
2027
2027
|
onCancel(): void;
|
|
@@ -2064,8 +2064,8 @@ declare class MetadataValueEditModal implements OnInit {
|
|
|
2064
2064
|
get totalSampleCount(): number;
|
|
2065
2065
|
isSampleSelected(sampleIndex: number): boolean;
|
|
2066
2066
|
onSubmit(): void;
|
|
2067
|
-
static ɵfac:
|
|
2068
|
-
static ɵcmp:
|
|
2067
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataValueEditModal, never>;
|
|
2068
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<MetadataValueEditModal, "ccv-metadata-value-edit-modal", never, { "config": { "alias": "config"; "required": false; }; }, { "valueSaved": "valueSaved"; }, never, never, true, never>;
|
|
2069
2069
|
}
|
|
2070
2070
|
|
|
2071
2071
|
interface ExcelExportOptions {
|
|
@@ -2076,13 +2076,13 @@ interface ExcelExportOptions {
|
|
|
2076
2076
|
declare class ExcelExportModalComponent implements OnInit {
|
|
2077
2077
|
activeModal: NgbActiveModal;
|
|
2078
2078
|
labGroupService: LabGroupService;
|
|
2079
|
-
isLoadingLabGroups:
|
|
2080
|
-
availableLabGroups:
|
|
2081
|
-
includeLabGroups:
|
|
2082
|
-
selectedLabGroupIds:
|
|
2083
|
-
includePools:
|
|
2084
|
-
showLabGroupSelection:
|
|
2085
|
-
canConfirm:
|
|
2079
|
+
isLoadingLabGroups: _angular_core.WritableSignal<boolean>;
|
|
2080
|
+
availableLabGroups: _angular_core.WritableSignal<LabGroup[]>;
|
|
2081
|
+
includeLabGroups: _angular_core.WritableSignal<"none" | "selected" | "all">;
|
|
2082
|
+
selectedLabGroupIds: _angular_core.WritableSignal<number[]>;
|
|
2083
|
+
includePools: _angular_core.WritableSignal<boolean>;
|
|
2084
|
+
showLabGroupSelection: _angular_core.Signal<boolean>;
|
|
2085
|
+
canConfirm: _angular_core.Signal<boolean>;
|
|
2086
2086
|
ngOnInit(): void;
|
|
2087
2087
|
private loadLabGroups;
|
|
2088
2088
|
onLabGroupToggle(labGroupId: number, checked: boolean): void;
|
|
@@ -2092,8 +2092,8 @@ declare class ExcelExportModalComponent implements OnInit {
|
|
|
2092
2092
|
deselectAllLabGroups(): void;
|
|
2093
2093
|
confirm(): void;
|
|
2094
2094
|
cancel(): void;
|
|
2095
|
-
static ɵfac:
|
|
2096
|
-
static ɵcmp:
|
|
2095
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ExcelExportModalComponent, never>;
|
|
2096
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<ExcelExportModalComponent, "ccv-excel-export-modal", never, {}, {}, never, never, true, never>;
|
|
2097
2097
|
}
|
|
2098
2098
|
|
|
2099
2099
|
interface ValidationResults {
|
|
@@ -2108,8 +2108,8 @@ declare class ValidationResultsModal {
|
|
|
2108
2108
|
results?: ValidationResults;
|
|
2109
2109
|
activeModal: NgbActiveModal;
|
|
2110
2110
|
formatTimestamp(timestamp: string): string;
|
|
2111
|
-
static ɵfac:
|
|
2112
|
-
static ɵcmp:
|
|
2111
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ValidationResultsModal, never>;
|
|
2112
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<ValidationResultsModal, "ccv-validation-results-modal", never, { "results": { "alias": "results"; "required": false; }; }, {}, never, never, true, never>;
|
|
2113
2113
|
}
|
|
2114
2114
|
|
|
2115
2115
|
declare class MetadataValidationModal {
|
|
@@ -2118,14 +2118,14 @@ declare class MetadataValidationModal {
|
|
|
2118
2118
|
private asyncTaskService;
|
|
2119
2119
|
private toastService;
|
|
2120
2120
|
activeModal: NgbActiveModal;
|
|
2121
|
-
isValidating:
|
|
2122
|
-
validationError:
|
|
2121
|
+
isValidating: _angular_core.WritableSignal<boolean>;
|
|
2122
|
+
validationError: _angular_core.WritableSignal<string | null>;
|
|
2123
2123
|
validationForm: _angular_forms.FormGroup<{
|
|
2124
2124
|
validate_sdrf_format: _angular_forms.FormControl<boolean | null>;
|
|
2125
2125
|
}>;
|
|
2126
2126
|
onSubmit(): void;
|
|
2127
|
-
static ɵfac:
|
|
2128
|
-
static ɵcmp:
|
|
2127
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataValidationModal, never>;
|
|
2128
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<MetadataValidationModal, "ccv-metadata-validation-modal", never, { "config": { "alias": "config"; "required": false; }; }, {}, never, never, true, never>;
|
|
2129
2129
|
}
|
|
2130
2130
|
|
|
2131
2131
|
declare class MetadataTableEditModal implements OnInit {
|
|
@@ -2138,9 +2138,9 @@ declare class MetadataTableEditModal implements OnInit {
|
|
|
2138
2138
|
isCreateMode: boolean;
|
|
2139
2139
|
tableSaved: EventEmitter<MetadataTable>;
|
|
2140
2140
|
editForm: FormGroup;
|
|
2141
|
-
isLoading:
|
|
2142
|
-
availableLabGroups:
|
|
2143
|
-
isLoadingLabGroups:
|
|
2141
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2142
|
+
availableLabGroups: _angular_core.WritableSignal<LabGroup[]>;
|
|
2143
|
+
isLoadingLabGroups: _angular_core.WritableSignal<boolean>;
|
|
2144
2144
|
constructor(fb: FormBuilder, activeModal: NgbActiveModal, modalService: NgbModal, metadataTableService: MetadataTableService, labGroupService: LabGroupService);
|
|
2145
2145
|
ngOnInit(): void;
|
|
2146
2146
|
loadLabGroups(): void;
|
|
@@ -2156,8 +2156,8 @@ declare class MetadataTableEditModal implements OnInit {
|
|
|
2156
2156
|
isFieldInvalid(fieldName: string): boolean;
|
|
2157
2157
|
getFieldError(fieldName: string): string;
|
|
2158
2158
|
private getFieldDisplayName;
|
|
2159
|
-
static ɵfac:
|
|
2160
|
-
static ɵcmp:
|
|
2159
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataTableEditModal, never>;
|
|
2160
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<MetadataTableEditModal, "ccv-metadata-table-edit-modal", never, { "table": { "alias": "table"; "required": false; }; "isCreateMode": { "alias": "isCreateMode"; "required": false; }; }, { "tableSaved": "tableSaved"; }, never, never, true, never>;
|
|
2161
2161
|
}
|
|
2162
2162
|
|
|
2163
2163
|
declare class AsyncTaskUIService implements OnDestroy {
|
|
@@ -2221,8 +2221,8 @@ declare class AsyncTaskUIService implements OnDestroy {
|
|
|
2221
2221
|
private showValidationResultsModal;
|
|
2222
2222
|
private handleImportTaskCompletion;
|
|
2223
2223
|
private handleReorderTaskCompletion;
|
|
2224
|
-
static ɵfac:
|
|
2225
|
-
static ɵprov:
|
|
2224
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<AsyncTaskUIService, never>;
|
|
2225
|
+
static ɵprov: _angular_core.ɵɵInjectableDeclaration<AsyncTaskUIService>;
|
|
2226
2226
|
}
|
|
2227
2227
|
|
|
2228
2228
|
declare class MetadataTableTemplates implements OnInit {
|
|
@@ -2235,22 +2235,22 @@ declare class MetadataTableTemplates implements OnInit {
|
|
|
2235
2235
|
searchForm: FormGroup;
|
|
2236
2236
|
private searchParams;
|
|
2237
2237
|
private labGroupParams;
|
|
2238
|
-
isLoading:
|
|
2239
|
-
selectedLabGroup:
|
|
2240
|
-
currentPage:
|
|
2241
|
-
pageSize:
|
|
2242
|
-
totalItems:
|
|
2243
|
-
labGroupsCurrentPage:
|
|
2244
|
-
labGroupsPageSize:
|
|
2245
|
-
labGroupsTotalItems:
|
|
2246
|
-
templatesData:
|
|
2247
|
-
labGroupsData:
|
|
2248
|
-
hasTemplates:
|
|
2249
|
-
hasLabGroups:
|
|
2250
|
-
showTemplatesPagination:
|
|
2251
|
-
showLabGroupsPagination:
|
|
2252
|
-
availableSchemas:
|
|
2253
|
-
isLoadingSchemas:
|
|
2238
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2239
|
+
selectedLabGroup: _angular_core.WritableSignal<LabGroup | null>;
|
|
2240
|
+
currentPage: _angular_core.WritableSignal<number>;
|
|
2241
|
+
pageSize: _angular_core.WritableSignal<number>;
|
|
2242
|
+
totalItems: _angular_core.WritableSignal<number>;
|
|
2243
|
+
labGroupsCurrentPage: _angular_core.WritableSignal<number>;
|
|
2244
|
+
labGroupsPageSize: _angular_core.WritableSignal<number>;
|
|
2245
|
+
labGroupsTotalItems: _angular_core.WritableSignal<number>;
|
|
2246
|
+
templatesData: _angular_core.WritableSignal<MetadataTableTemplateQueryResponse>;
|
|
2247
|
+
labGroupsData: _angular_core.WritableSignal<LabGroupQueryResponse>;
|
|
2248
|
+
hasTemplates: _angular_core.Signal<boolean>;
|
|
2249
|
+
hasLabGroups: _angular_core.Signal<boolean>;
|
|
2250
|
+
showTemplatesPagination: _angular_core.Signal<boolean>;
|
|
2251
|
+
showLabGroupsPagination: _angular_core.Signal<boolean>;
|
|
2252
|
+
availableSchemas: _angular_core.WritableSignal<any[]>;
|
|
2253
|
+
isLoadingSchemas: _angular_core.WritableSignal<boolean>;
|
|
2254
2254
|
constructor(fb: FormBuilder, metadataTableTemplateService: MetadataTableTemplateService, labGroupService: LabGroupService, modalService: NgbModal, toastService: ToastService, asyncTaskService: AsyncTaskUIService);
|
|
2255
2255
|
ngOnInit(): void;
|
|
2256
2256
|
private loadInitialData;
|
|
@@ -2284,8 +2284,8 @@ declare class MetadataTableTemplates implements OnInit {
|
|
|
2284
2284
|
* Perform the actual template column reordering with async task monitoring
|
|
2285
2285
|
*/
|
|
2286
2286
|
private performTemplateColumnReorder;
|
|
2287
|
-
static ɵfac:
|
|
2288
|
-
static ɵcmp:
|
|
2287
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataTableTemplates, never>;
|
|
2288
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<MetadataTableTemplates, "ccv-metadata-table-templates", never, {}, {}, never, never, true, never>;
|
|
2289
2289
|
}
|
|
2290
2290
|
|
|
2291
2291
|
declare class MetadataTableTemplateEditModal implements OnInit {
|
|
@@ -2299,9 +2299,9 @@ declare class MetadataTableTemplateEditModal implements OnInit {
|
|
|
2299
2299
|
isEdit: boolean;
|
|
2300
2300
|
templateSaved: EventEmitter<Partial<MetadataTableTemplate>>;
|
|
2301
2301
|
editForm: FormGroup;
|
|
2302
|
-
isLoading:
|
|
2303
|
-
_templateColumns:
|
|
2304
|
-
templateColumns:
|
|
2302
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2303
|
+
_templateColumns: _angular_core.WritableSignal<MetadataColumn[]>;
|
|
2304
|
+
templateColumns: _angular_core.Signal<MetadataColumn[]>;
|
|
2305
2305
|
visibilityOptions: {
|
|
2306
2306
|
value: ResourceVisibility;
|
|
2307
2307
|
label: string;
|
|
@@ -2330,8 +2330,8 @@ declare class MetadataTableTemplateEditModal implements OnInit {
|
|
|
2330
2330
|
private getNextPositionForNameType;
|
|
2331
2331
|
private normalizeColumnPositions;
|
|
2332
2332
|
private enforceGrouping;
|
|
2333
|
-
static ɵfac:
|
|
2334
|
-
static ɵcmp:
|
|
2333
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<MetadataTableTemplateEditModal, never>;
|
|
2334
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<MetadataTableTemplateEditModal, "ccv-metadata-table-template-edit-modal", never, { "template": { "alias": "template"; "required": false; }; "labGroups": { "alias": "labGroups"; "required": false; }; "isEdit": { "alias": "isEdit"; "required": false; }; }, { "templateSaved": "templateSaved"; }, never, never, true, never>;
|
|
2335
2335
|
}
|
|
2336
2336
|
|
|
2337
2337
|
declare class ColumnEditModal implements OnInit {
|
|
@@ -2345,8 +2345,8 @@ declare class ColumnEditModal implements OnInit {
|
|
|
2345
2345
|
isEdit: boolean;
|
|
2346
2346
|
columnSaved: EventEmitter<Partial<MetadataColumn>>;
|
|
2347
2347
|
editForm: FormGroup;
|
|
2348
|
-
isLoading:
|
|
2349
|
-
showAdvancedMode:
|
|
2348
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2349
|
+
showAdvancedMode: _angular_core.WritableSignal<boolean>;
|
|
2350
2350
|
selectedOntologyConfig: OntologyTypeConfig | null;
|
|
2351
2351
|
columnTypes: ColumnTypeConfig[];
|
|
2352
2352
|
ontologyTypes: OntologyTypeConfig[];
|
|
@@ -2398,8 +2398,8 @@ declare class ColumnEditModal implements OnInit {
|
|
|
2398
2398
|
toggleAdvancedMode(): void;
|
|
2399
2399
|
onOntologyTypeChange(event: Event): void;
|
|
2400
2400
|
private getCorrectedColumnType;
|
|
2401
|
-
static ɵfac:
|
|
2402
|
-
static ɵcmp:
|
|
2401
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ColumnEditModal, never>;
|
|
2402
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<ColumnEditModal, "ccv-column-edit-modal", never, { "column": { "alias": "column"; "required": false; }; "templateId": { "alias": "templateId"; "required": false; }; "isEdit": { "alias": "isEdit"; "required": false; }; }, { "columnSaved": "columnSaved"; }, never, never, true, never>;
|
|
2403
2403
|
}
|
|
2404
2404
|
|
|
2405
2405
|
interface TemplateSchemaSelectionResult {
|
|
@@ -2417,8 +2417,8 @@ declare class TemplateSchemaSelectionModal {
|
|
|
2417
2417
|
labGroups: any[];
|
|
2418
2418
|
templateCreated: EventEmitter<TemplateSchemaSelectionResult>;
|
|
2419
2419
|
templateForm: FormGroup;
|
|
2420
|
-
selectedSchemas:
|
|
2421
|
-
selectedSchemasCount:
|
|
2420
|
+
selectedSchemas: _angular_core.WritableSignal<Set<number>>;
|
|
2421
|
+
selectedSchemasCount: _angular_core.Signal<number>;
|
|
2422
2422
|
constructor(fb: FormBuilder, activeModal: NgbActiveModal);
|
|
2423
2423
|
toggleSchema(schemaId: number): void;
|
|
2424
2424
|
onSchemaCheckChange(event: Event, schemaId: number): void;
|
|
@@ -2430,8 +2430,8 @@ declare class TemplateSchemaSelectionModal {
|
|
|
2430
2430
|
canCreateTemplate(): boolean;
|
|
2431
2431
|
onCreateTemplate(): void;
|
|
2432
2432
|
onCancel(): void;
|
|
2433
|
-
static ɵfac:
|
|
2434
|
-
static ɵcmp:
|
|
2433
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<TemplateSchemaSelectionModal, never>;
|
|
2434
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<TemplateSchemaSelectionModal, "ccv-template-schema-selection-modal", never, { "availableSchemas": { "alias": "availableSchemas"; "required": false; }; "labGroups": { "alias": "labGroups"; "required": false; }; }, { "templateCreated": "templateCreated"; }, never, never, true, never>;
|
|
2435
2435
|
}
|
|
2436
2436
|
|
|
2437
2437
|
interface TableCreationData {
|
|
@@ -2459,8 +2459,8 @@ declare class TableCreationModalComponent implements OnInit {
|
|
|
2459
2459
|
setErrorMessage(message: string | null): void;
|
|
2460
2460
|
getFieldError(fieldName: string): string | null;
|
|
2461
2461
|
private getFieldLabel;
|
|
2462
|
-
static ɵfac:
|
|
2463
|
-
static ɵcmp:
|
|
2462
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<TableCreationModalComponent, never>;
|
|
2463
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<TableCreationModalComponent, "ccv-table-creation-modal", never, { "template": { "alias": "template"; "required": false; }; "labGroups": { "alias": "labGroups"; "required": false; }; "selectedLabGroupId": { "alias": "selectedLabGroupId"; "required": false; }; }, { "tableCreated": "tableCreated"; }, never, never, true, never>;
|
|
2464
2464
|
}
|
|
2465
2465
|
|
|
2466
2466
|
interface SchemaSelectionResult {
|
|
@@ -2473,10 +2473,10 @@ declare class SchemaSelectionModal implements OnInit, OnDestroy {
|
|
|
2473
2473
|
private destroy$;
|
|
2474
2474
|
title: string;
|
|
2475
2475
|
description: string;
|
|
2476
|
-
isLoading:
|
|
2477
|
-
availableSchemas:
|
|
2478
|
-
selectedSchemaIds:
|
|
2479
|
-
searchTerm:
|
|
2476
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2477
|
+
availableSchemas: _angular_core.WritableSignal<Schema[]>;
|
|
2478
|
+
selectedSchemaIds: _angular_core.WritableSignal<Set<number>>;
|
|
2479
|
+
searchTerm: _angular_core.WritableSignal<string>;
|
|
2480
2480
|
constructor(activeModal: NgbActiveModal, schemaService: SchemaService, toastService: ToastService);
|
|
2481
2481
|
ngOnInit(): void;
|
|
2482
2482
|
ngOnDestroy(): void;
|
|
@@ -2489,14 +2489,209 @@ declare class SchemaSelectionModal implements OnInit, OnDestroy {
|
|
|
2489
2489
|
onCancel(): void;
|
|
2490
2490
|
onConfirm(): void;
|
|
2491
2491
|
getBadgeClass(category?: string): string;
|
|
2492
|
-
static ɵfac:
|
|
2493
|
-
static ɵcmp:
|
|
2492
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<SchemaSelectionModal, never>;
|
|
2493
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<SchemaSelectionModal, "ccv-schema-selection-modal", never, {}, {}, never, never, true, never>;
|
|
2494
|
+
}
|
|
2495
|
+
|
|
2496
|
+
declare class ColumnTemplates implements OnInit {
|
|
2497
|
+
private fb;
|
|
2498
|
+
private metadataColumnTemplateService;
|
|
2499
|
+
private labGroupService;
|
|
2500
|
+
private modalService;
|
|
2501
|
+
searchForm: FormGroup;
|
|
2502
|
+
private searchParams;
|
|
2503
|
+
private labGroupParams;
|
|
2504
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2505
|
+
selectedLabGroup: _angular_core.WritableSignal<LabGroup | null>;
|
|
2506
|
+
currentPage: _angular_core.WritableSignal<number>;
|
|
2507
|
+
pageSize: _angular_core.WritableSignal<number>;
|
|
2508
|
+
totalItems: _angular_core.WritableSignal<number>;
|
|
2509
|
+
labGroupsCurrentPage: _angular_core.WritableSignal<number>;
|
|
2510
|
+
labGroupsPageSize: _angular_core.WritableSignal<number>;
|
|
2511
|
+
labGroupsTotalItems: _angular_core.WritableSignal<number>;
|
|
2512
|
+
columnFilter: _angular_core.WritableSignal<string>;
|
|
2513
|
+
sortField: _angular_core.WritableSignal<string>;
|
|
2514
|
+
sortDirection: _angular_core.WritableSignal<"asc" | "desc">;
|
|
2515
|
+
templatesData: _angular_core.WritableSignal<{
|
|
2516
|
+
count: number;
|
|
2517
|
+
results: MetadataColumnTemplate[];
|
|
2518
|
+
}>;
|
|
2519
|
+
labGroupsData: _angular_core.WritableSignal<LabGroupQueryResponse>;
|
|
2520
|
+
hasTemplates: _angular_core.Signal<boolean>;
|
|
2521
|
+
hasLabGroups: _angular_core.Signal<boolean>;
|
|
2522
|
+
showTemplatesPagination: _angular_core.Signal<boolean>;
|
|
2523
|
+
showLabGroupsPagination: _angular_core.Signal<boolean>;
|
|
2524
|
+
filteredTemplates: _angular_core.Signal<MetadataColumnTemplate[]>;
|
|
2525
|
+
constructor(fb: FormBuilder, metadataColumnTemplateService: MetadataColumnTemplateService, labGroupService: LabGroupService, modalService: NgbModal);
|
|
2526
|
+
ngOnInit(): void;
|
|
2527
|
+
private loadInitialData;
|
|
2528
|
+
private loadLabGroupsWithParams;
|
|
2529
|
+
private setupSearch;
|
|
2530
|
+
private loadTemplatesWithParams;
|
|
2531
|
+
onLabGroupChange(event: Event): void;
|
|
2532
|
+
private findLabGroupById;
|
|
2533
|
+
onPageChange(page: number): void;
|
|
2534
|
+
onLabGroupsPageChange(page: number): void;
|
|
2535
|
+
onColumnFilterChange(value: string): void;
|
|
2536
|
+
clearColumnFilter(): void;
|
|
2537
|
+
get filteredTemplatesCount(): number;
|
|
2538
|
+
get totalTemplatesCount(): number;
|
|
2539
|
+
sortBy(field: string): void;
|
|
2540
|
+
getSortIcon(field: string): string;
|
|
2541
|
+
isSorted(field: string): boolean;
|
|
2542
|
+
createTemplate(): void;
|
|
2543
|
+
editTemplate(template: MetadataColumnTemplate): void;
|
|
2544
|
+
private openTemplateModal;
|
|
2545
|
+
private handleTemplateSave;
|
|
2546
|
+
deleteTemplate(template: MetadataColumnTemplate): void;
|
|
2547
|
+
duplicateTemplate(template: MetadataColumnTemplate): void;
|
|
2548
|
+
private refreshTemplates;
|
|
2549
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ColumnTemplates, never>;
|
|
2550
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<ColumnTemplates, "ccv-column-templates", never, {}, {}, never, never, true, never>;
|
|
2551
|
+
}
|
|
2552
|
+
|
|
2553
|
+
declare class ColumnTemplateEditModal implements OnInit {
|
|
2554
|
+
private fb;
|
|
2555
|
+
private activeModal;
|
|
2556
|
+
template: MetadataColumnTemplate | null;
|
|
2557
|
+
labGroups: LabGroup[];
|
|
2558
|
+
isEdit: boolean;
|
|
2559
|
+
templateSaved: EventEmitter<Partial<MetadataColumnTemplate>>;
|
|
2560
|
+
editForm: FormGroup;
|
|
2561
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2562
|
+
Object: ObjectConstructor;
|
|
2563
|
+
columnTypes: ColumnTypeConfig[];
|
|
2564
|
+
visibilityOptions: {
|
|
2565
|
+
value: string;
|
|
2566
|
+
label: string;
|
|
2567
|
+
}[];
|
|
2568
|
+
ontologyTypes: OntologyTypeConfig[];
|
|
2569
|
+
constructor(fb: FormBuilder, activeModal: NgbActiveModal);
|
|
2570
|
+
ngOnInit(): void;
|
|
2571
|
+
private populateForm;
|
|
2572
|
+
onVisibilityChange(): void;
|
|
2573
|
+
onOntologyTypeChange(): void;
|
|
2574
|
+
onSubmit(): void;
|
|
2575
|
+
private markFormGroupTouched;
|
|
2576
|
+
onCancel(): void;
|
|
2577
|
+
onClose(): void;
|
|
2578
|
+
getFieldError(fieldName: string): string;
|
|
2579
|
+
get title(): string;
|
|
2580
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<ColumnTemplateEditModal, never>;
|
|
2581
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<ColumnTemplateEditModal, "ccv-column-template-edit-modal", never, { "template": { "alias": "template"; "required": false; }; "labGroups": { "alias": "labGroups"; "required": false; }; "isEdit": { "alias": "isEdit"; "required": false; }; }, { "templateSaved": "templateSaved"; }, never, never, true, never>;
|
|
2582
|
+
}
|
|
2583
|
+
|
|
2584
|
+
declare class FavoriteManagement implements OnInit {
|
|
2585
|
+
private fb;
|
|
2586
|
+
private favouriteMetadataOptionService;
|
|
2587
|
+
private metadataColumnTemplateService;
|
|
2588
|
+
private labGroupService;
|
|
2589
|
+
private toastService;
|
|
2590
|
+
private modalService;
|
|
2591
|
+
private authService;
|
|
2592
|
+
Math: Math;
|
|
2593
|
+
isLoading: _angular_core.WritableSignal<boolean>;
|
|
2594
|
+
favorites: _angular_core.WritableSignal<FavouriteMetadataOption[]>;
|
|
2595
|
+
totalFavoritesCount: _angular_core.WritableSignal<number>;
|
|
2596
|
+
searchTerm: _angular_core.WritableSignal<string>;
|
|
2597
|
+
scopeFilter: _angular_core.WritableSignal<string>;
|
|
2598
|
+
labGroupFilter: _angular_core.WritableSignal<string>;
|
|
2599
|
+
columnTypeFilter: _angular_core.WritableSignal<string>;
|
|
2600
|
+
filteredFavorites: _angular_core.Signal<FavouriteMetadataOption[]>;
|
|
2601
|
+
currentPage: _angular_core.WritableSignal<number>;
|
|
2602
|
+
pageSize: _angular_core.WritableSignal<number>;
|
|
2603
|
+
paginatedFavorites: _angular_core.Signal<FavouriteMetadataOption[]>;
|
|
2604
|
+
totalPages: _angular_core.Signal<number>;
|
|
2605
|
+
searchForm: FormGroup;
|
|
2606
|
+
editForm: FormGroup;
|
|
2607
|
+
isEditMode: _angular_core.WritableSignal<boolean>;
|
|
2608
|
+
editingFavorite: _angular_core.WritableSignal<FavouriteMetadataOption | null>;
|
|
2609
|
+
showEditModal: _angular_core.WritableSignal<boolean>;
|
|
2610
|
+
private sdrfSyntaxService;
|
|
2611
|
+
specialSyntaxType: _angular_core.WritableSignal<SyntaxType | null>;
|
|
2612
|
+
showSpecialInput: _angular_core.WritableSignal<boolean>;
|
|
2613
|
+
specialInputValue: _angular_core.WritableSignal<string>;
|
|
2614
|
+
currentUser: _angular_core.WritableSignal<User | null>;
|
|
2615
|
+
isAdmin: _angular_core.Signal<boolean>;
|
|
2616
|
+
currentUserId: _angular_core.Signal<number | null>;
|
|
2617
|
+
userLabGroups: _angular_core.WritableSignal<LabGroup[]>;
|
|
2618
|
+
userLabGroupsLoaded: _angular_core.WritableSignal<boolean>;
|
|
2619
|
+
selectedOntologyValue: string | null;
|
|
2620
|
+
availableLabGroups: _angular_core.WritableSignal<{
|
|
2621
|
+
id: number;
|
|
2622
|
+
name: string;
|
|
2623
|
+
}[]>;
|
|
2624
|
+
allLabGroups: _angular_core.WritableSignal<{
|
|
2625
|
+
id: number;
|
|
2626
|
+
name: string;
|
|
2627
|
+
}[]>;
|
|
2628
|
+
availableColumnTemplates: _angular_core.WritableSignal<MetadataColumnTemplate[]>;
|
|
2629
|
+
columnTemplatesLoaded: _angular_core.WritableSignal<boolean>;
|
|
2630
|
+
columnTypes: {
|
|
2631
|
+
value: string;
|
|
2632
|
+
label: string;
|
|
2633
|
+
}[];
|
|
2634
|
+
constructor(fb: FormBuilder, favouriteMetadataOptionService: FavouriteMetadataOptionService, metadataColumnTemplateService: MetadataColumnTemplateService, labGroupService: LabGroupService, toastService: ToastService, modalService: NgbModal, authService: AuthService);
|
|
2635
|
+
ngOnInit(): void;
|
|
2636
|
+
loadFavorites(): void;
|
|
2637
|
+
canEditFavorite(favorite: FavouriteMetadataOption): boolean;
|
|
2638
|
+
canDeleteFavorite(favorite: FavouriteMetadataOption): boolean;
|
|
2639
|
+
openCreateModal(): void;
|
|
2640
|
+
openEditModal(favorite: FavouriteMetadataOption): void;
|
|
2641
|
+
saveFavorite(): void;
|
|
2642
|
+
deleteFavorite(favorite: FavouriteMetadataOption): void;
|
|
2643
|
+
closeEditModal(): void;
|
|
2644
|
+
onPageChange(page: number): void;
|
|
2645
|
+
onPageSizeChange(size: number): void;
|
|
2646
|
+
clearFilters(): void;
|
|
2647
|
+
getScopeDisplay(favorite: FavouriteMetadataOption): string;
|
|
2648
|
+
getScopeClass(favorite: FavouriteMetadataOption): string;
|
|
2649
|
+
get editModalTitle(): string;
|
|
2650
|
+
loadUserLabGroups(): void;
|
|
2651
|
+
loadAvailableColumnTemplates(): void;
|
|
2652
|
+
searchColumnNames: OperatorFunction<string, readonly string[]>;
|
|
2653
|
+
private getColumnNameSuggestions;
|
|
2654
|
+
searchColumnTypes: OperatorFunction<string, readonly string[]>;
|
|
2655
|
+
private getColumnTypeSuggestions;
|
|
2656
|
+
onColumnNameSelected(event: any): void;
|
|
2657
|
+
private findTemplatesForColumnName;
|
|
2658
|
+
onColumnTypeSelected(event: any): void;
|
|
2659
|
+
openValueEditModal(): void;
|
|
2660
|
+
searchLabGroups: OperatorFunction<string, readonly {
|
|
2661
|
+
id: number;
|
|
2662
|
+
name: string;
|
|
2663
|
+
}[]>;
|
|
2664
|
+
private getLabGroupSuggestions;
|
|
2665
|
+
formatLabGroup: (group: {
|
|
2666
|
+
id: number;
|
|
2667
|
+
name: string;
|
|
2668
|
+
}) => string;
|
|
2669
|
+
inputLabGroupFormatter: (group: {
|
|
2670
|
+
id: number;
|
|
2671
|
+
name: string;
|
|
2672
|
+
}) => string;
|
|
2673
|
+
onLabGroupSelected: (event: any) => void;
|
|
2674
|
+
getCleanColumnName(name: string): string;
|
|
2675
|
+
getCleanColumnType(type: string): string;
|
|
2676
|
+
isComplexValue(value: string): boolean;
|
|
2677
|
+
parseComplexValue(value: string): {
|
|
2678
|
+
key: string;
|
|
2679
|
+
value: string;
|
|
2680
|
+
}[];
|
|
2681
|
+
checkForSpecialSyntax(): void;
|
|
2682
|
+
onSpecialInputChange(value: string): void;
|
|
2683
|
+
toggleSpecialInput(): void;
|
|
2684
|
+
getSpecialInputTitle(): string;
|
|
2685
|
+
getColumnTypeClass(favouriteOption: FavouriteMetadataOption): string;
|
|
2686
|
+
getColumnTypeIcon(favouriteMetadataOption: FavouriteMetadataOption): string;
|
|
2687
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<FavoriteManagement, never>;
|
|
2688
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<FavoriteManagement, "ccv-favorite-management", never, {}, {}, never, never, true, never>;
|
|
2494
2689
|
}
|
|
2495
2690
|
|
|
2496
2691
|
declare class CupcakeVanilla {
|
|
2497
|
-
static ɵfac:
|
|
2498
|
-
static ɵcmp:
|
|
2692
|
+
static ɵfac: _angular_core.ɵɵFactoryDeclaration<CupcakeVanilla, never>;
|
|
2693
|
+
static ɵcmp: _angular_core.ɵɵComponentDeclaration<CupcakeVanilla, "ccv-cupcake-vanilla", never, {}, {}, never, never, true, never>;
|
|
2499
2694
|
}
|
|
2500
2695
|
|
|
2501
|
-
export { AdminWebSocketService, AsyncExportService, AsyncImportService, AsyncTaskService, AsyncTaskUIService, AsyncValidationService, COLUMN_TYPE_CONFIGS, ChunkedImportService, ChunkedUploadService, ColumnEditModal, ColumnType, CupcakeVanilla, ElectronService, ExcelExportModalComponent, FavouriteMetadataOptionService, MSTermType, MetadataColumnService, MetadataColumnTemplateService, MetadataColumnTemplateShareService, MetadataManagementService, MetadataTableEditModal, MetadataTableService, MetadataTableTemplateEditModal, MetadataTableTemplateService, MetadataTableTemplates, MetadataValidationModal, MetadataValueEditModal, NotificationService, NotificationType, OFFICIAL_SDRF_COLUMNS, ONTOLOGY_TYPE_CONFIGS, OntologySearchService, OntologyType, OntologyTypeLabels, OntologyUtils, SDRFDefaultsService, SamplePoolService, SchemaSelectionModal, SchemaService, SdrfAgeInput, SdrfCleavageInput, SdrfColumnCategory, SdrfModificationInput, SdrfSpikedCompoundInput, SdrfSyntaxService, TASK_STATUS_COLORS, TASK_STATUS_LABELS, TASK_TYPE_LABELS, TableCreationModalComponent, TemplatePermissionLabels, TemplatePermissionLevel, TemplateSchemaSelectionModal, ValidationResultsModal, Websocket, getRequiredSdrfColumns, getSdrfColumnByName, getSdrfColumnsByCategory, isSdrfColumnRequired, isUnimodFullData };
|
|
2696
|
+
export { AdminWebSocketService, AsyncExportService, AsyncImportService, AsyncTaskService, AsyncTaskUIService, AsyncValidationService, COLUMN_TYPE_CONFIGS, ChunkedImportService, ChunkedUploadService, ColumnEditModal, ColumnTemplateEditModal, ColumnTemplates, ColumnType, CupcakeVanilla, ElectronService, ExcelExportModalComponent, FavoriteManagement, FavouriteMetadataOptionService, MSTermType, MetadataColumnService, MetadataColumnTemplateService, MetadataColumnTemplateShareService, MetadataManagementService, MetadataTableEditModal, MetadataTableService, MetadataTableTemplateEditModal, MetadataTableTemplateService, MetadataTableTemplates, MetadataValidationModal, MetadataValueEditModal, NotificationService, NotificationType, OFFICIAL_SDRF_COLUMNS, ONTOLOGY_TYPE_CONFIGS, OntologySearchService, OntologyType, OntologyTypeLabels, OntologyUtils, SDRFDefaultsService, SamplePoolService, SchemaSelectionModal, SchemaService, SdrfAgeInput, SdrfCleavageInput, SdrfColumnCategory, SdrfModificationInput, SdrfSpikedCompoundInput, SdrfSyntaxService, TASK_STATUS_COLORS, TASK_STATUS_LABELS, TASK_TYPE_LABELS, TableCreationModalComponent, TemplatePermissionLabels, TemplatePermissionLevel, TemplateSchemaSelectionModal, ValidationResultsModal, Websocket, getRequiredSdrfColumns, getSdrfColumnByName, getSdrfColumnsByCategory, isSdrfColumnRequired, isUnimodFullData };
|
|
2502
2697
|
export type { AgeFormat, ApiResponse, AsyncTaskCreateResponse, AsyncTaskQueryParams, AsyncTaskStatus, BaseTimestampedModel, BulkExcelExportRequest, BulkExportRequest, CellOntology, ChEBICompound, ChunkedFileImportRequest, ChunkedImportProgress, ChunkedImportRequest, ChunkedUploadCompletionRequest, ChunkedUploadCompletionResponse, ChunkedUploadRequest, ChunkedUploadResponse, ChunkedUploadStatus, CleavageAgentDetails, ColumnTypeConfig, DownloadUrlResponse, ElectronAPI, ExcelExportOptions, FavouriteMetadataOption, FavouriteMetadataOptionCreateRequest, FavouriteMetadataOptionQueryParams, FavouriteMetadataOptionUpdateRequest, HumanDisease, MSUniqueVocabularies, MetadataColumn, MetadataColumnCreateRequest, MetadataColumnModifier, MetadataColumnQueryParams, MetadataColumnTemplate, MetadataColumnTemplateCreateRequest, MetadataColumnTemplateQueryParams, MetadataColumnTemplateShare, MetadataColumnTemplateShareCreateRequest, MetadataColumnTemplateShareQueryParams, MetadataColumnTemplateUpdateRequest, MetadataColumnUpdateRequest, MetadataExportRequest, MetadataImportRequest, MetadataQueryParams, MetadataTable, MetadataTableCreateRequest, MetadataTableQueryParams, MetadataTableQueryResponse, MetadataTableTemplate, MetadataTableTemplateCreateRequest, MetadataTableTemplateQueryParams, MetadataTableTemplateQueryResponse, MetadataTableTemplateUpdateRequest, MetadataTableUpdateRequest, MetadataValidationConfig, MetadataValidationRequest, MetadataValueEditConfig, ModificationParameters, MondoDisease, NCBITaxonomy, OntologyCustomFilter, OntologySuggestParams, OntologySuggestResponse, OntologySuggestion, OntologyTypeConfig, PSIMSOntology, PaginatedResponse, PooledSample, SampleCountConfirmationError, SampleCountValidationRequest, SampleCountValidationResponse, SampleCountValidationResult, SamplePool, SamplePoolCreateRequest, SamplePoolQueryParams, SamplePoolUpdateRequest, Schema, SchemaQueryParams, SchemaSelectionResult, SdrfColumnConfig, Species, SpikedCompound, SubcellularLocation, SyntaxType, SyntheticPeptide, TableCreationData, TaskListItem, TaskResult, TaskStatus, TaskType, TemplateSchemaSelectionResult, Tissue, UberonAnatomy, Unimod, UnimodFullData, UnimodSpecification, ValidationResult, ValidationResults };
|