@nivora/matrix 0.2.3 → 0.3.1

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package/README.md

@@ -21,7 +21,7 @@ This system implements **GAMP 5** and **V-Model** compliance by making specifica
 | Artifact | Storage | Purpose |
 |----------|---------|---------|
 | **URS** | SQLite DB | High-level business requirements |
-| **FS** | Gherkin `.requirement` files | Functional specs + test scenarios |
+| **FS** | Gherkin `.feature` files | Functional specs + test scenarios |
 | **Risk** | SQLite DB | Risk assessments & mitigations |
 | **Release** | SQLite DB | Version management & test results |
 
@@ -63,7 +63,7 @@ Run `matrix sync` and the system creates a placeholder `URS-011` record. Fill in
 
 ### 2. Write Functional Specs (FS)
 
-Create `.requirement` files in `specs/fs/`:
+Create `.feature` files in `specs/fs/`:
 
 ```gherkin
 @URS-001 @URS-002 @RISK-005
@@ -104,7 +104,7 @@ matrix sync
 ```
 
 **What sync does:**
-1. Parses all `.requirement` files in `specs/fs/`
+1. Parses all `.feature` files in `specs/fs/`
 2. Updates database with Feature titles, descriptions, and scenarios
 3. Extracts `@URS` and `@RISK` tags
 4. Auto-creates stub records for any referenced IDs that don't exist
@@ -138,7 +138,7 @@ matrix release tag REL-001 --fs FS-001 FS-002 FS-003
 Execute Cucumber tests and export results:
 
 ```bash
-npx cucumber-js specs/fs/**/*.requirement --format json:results.json
+npx cucumber-js specs/fs/**/*.feature --format json:results.json
 ```
 
 ### 4. Import Test Results
@@ -212,7 +212,7 @@ matrix release list
 |---------|-------------|
 | `matrix init` | Initialize a new specs directory |
 | `matrix serve` | Start the dashboard server |
-| `matrix sync` | Parse `.requirement` files and update database |
+| `matrix sync` | Parse `.feature` files and update database |
 | `matrix search <query>` | Semantic search across specs |
 
 ### Release Commands

package/bin/cli.js

@@ -2200,6 +2200,7 @@ var init_database = __esm(() => {
 // src/lib/database/fs-repo.ts
 var exports_fs_repo = {};
 __export(exports_fs_repo, {
+  updateFSURSLinks: () => updateFSURSLinks,
   syncFS: () => syncFS,
   loadFSMetadata: () => loadFSMetadata,
   loadAllFSMetadata: () => loadAllFSMetadata,
@@ -2303,6 +2304,50 @@ function deleteFS(id) {
   const result = db2.query("DELETE FROM fs WHERE id = ?").run(id);
   return result.changes > 0;
 }
+function updateFSURSLinks(fsId, ursIds) {
+  const db2 = getDb();
+  const { readFileSync: readFileSync4, writeFileSync } = __require("fs");
+  const row = db2.query("SELECT file_path FROM fs WHERE id = ?").get(fsId);
+  if (!row)
+    return false;
+  const filePath = row.file_path;
+  db2.query("DELETE FROM fs_urs_link WHERE fs_id = ?").run(fsId);
+  for (const ursId of ursIds) {
+    db2.query("INSERT OR IGNORE INTO fs_urs_link (fs_id, urs_id) VALUES (?, ?)").run(fsId, ursId);
+  }
+  try {
+    const content = readFileSync4(filePath, "utf-8");
+    const lines = content.split(`
+`);
+    const riskLinks = db2.query("SELECT risk_id FROM risk_fs_link WHERE fs_id = ?").all(fsId);
+    const riskTags = riskLinks.map((r) => `@${r.risk_id}`);
+    const ursTags = ursIds.map((id) => `@${id}`);
+    const allTags = [...ursTags, ...riskTags].join(" ");
+    let featureLineIndex = lines.findIndex((l) => l.trim().startsWith("Feature:"));
+    if (featureLineIndex === -1)
+      return false;
+    let startIndex = 0;
+    for (let i = 0;i < featureLineIndex; i++) {
+      if (lines[i].trim().startsWith("@")) {
+        startIndex = i + 1;
+      } else if (lines[i].trim() === "") {
+        continue;
+      } else {
+        break;
+      }
+    }
+    const newLines = [
+      allTags,
+      ...lines.slice(featureLineIndex)
+    ];
+    writeFileSync(filePath, newLines.join(`
+`), "utf-8");
+    return true;
+  } catch (err) {
+    console.error("Failed to update FS file:", err);
+    return false;
+  }
+}
 var init_fs_repo = __esm(() => {
   init_database();
 });
@@ -2684,10 +2729,14 @@ function createRisk(data, forcedId) {
                       risk_level, residual_risk)
     VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
   `).run(id, data.title, data.status, data.category, data.gamp_category, timestamp, timestamp, data.impact, data.probability, data.risk_level, data.residual_risk);
-  for (const fsId of data.fs_ids) {
-    db2.query(`
-      INSERT OR IGNORE INTO risk_fs_link (risk_id, fs_id) VALUES (?, ?)
-    `).run(id, fsId);
+  if (data.fs_ids.length > 0) {
+    db2.exec("PRAGMA foreign_keys = OFF");
+    for (const fsId of data.fs_ids) {
+      db2.query(`
+        INSERT OR IGNORE INTO risk_fs_link (risk_id, fs_id) VALUES (?, ?)
+      `).run(id, fsId);
+    }
+    db2.exec("PRAGMA foreign_keys = ON");
   }
   for (const item of data.risks) {
     db2.query(`
@@ -2717,12 +2766,14 @@ function updateRisk(id, data) {
     WHERE id = ?
   `).run(data.title ?? existing.title, data.status ?? existing.status, data.category ?? existing.category, data.gamp_category ?? existing.gamp_category, timestamp, data.impact ?? existing.impact, data.probability ?? existing.probability, data.risk_level ?? existing.risk_level, data.residual_risk ?? existing.residual_risk, id);
   if (data.fs_ids) {
+    db2.exec("PRAGMA foreign_keys = OFF");
     db2.query("DELETE FROM risk_fs_link WHERE risk_id = ?").run(id);
     for (const fsId of data.fs_ids) {
       db2.query(`
         INSERT OR IGNORE INTO risk_fs_link (risk_id, fs_id) VALUES (?, ?)
       `).run(id, fsId);
     }
+    db2.exec("PRAGMA foreign_keys = ON");
   }
   if (data.risks) {
     db2.query("DELETE FROM risk_item WHERE risk_id = ?").run(id);
@@ -2800,7 +2851,7 @@ function parseGherkinFS(content, filePath) {
   const featureMatch = featureLine?.match(/Feature:\s*(.+)/);
   const fullTitle = featureMatch?.[1] || basename(filePath);
   const idMatch = fullTitle.match(/^(FS-\d+)/);
-  const id = idMatch?.[1] || basename(filePath, ".requirement").toUpperCase();
+  const id = idMatch?.[1] || basename(filePath, ".feature").toUpperCase();
   const featureIndex = lines.findIndex((l) => l.trim().startsWith("Feature:"));
   let description = "";
   const requirements = [];
@@ -3287,7 +3338,7 @@ async function syncCommand(config) {
     closeDb2();
     return;
   }
-  const fsFiles = readdirSync(fsDir).filter((f) => f.endsWith(".requirement"));
+  const fsFiles = readdirSync(fsDir).filter((f) => f.endsWith(".feature"));
   console.log(`Syncing ${fsFiles.length} FS files...`);
   const fsItems = [];
   const referencedURS = new Set;
@@ -3366,10 +3417,6 @@ var EXAMPLE_FS = `@URS-001
 Feature: FS-001 Example Feature
   This is an example functional specification.
   
-  Requirements:
-  - FR-001.1: The system shall do something
-  - FR-001.2: The system shall do something else
-
   Scenario: Example scenario
     Given a precondition exists
     When an action is performed
@@ -3390,16 +3437,16 @@ async function initCommand(config) {
     }
   }
   const fsDir = join5(config.specsDir, "fs");
-  const examplePath = join5(fsDir, "FS-001-example.requirement");
+  const examplePath = join5(fsDir, "FS-001-example.feature");
   if (!existsSync5(examplePath)) {
     writeFileSync(examplePath, EXAMPLE_FS, "utf-8");
-    console.log(`  ✓ Created example FS: FS-001-example.requirement`);
+    console.log(`  ✓ Created example FS: FS-001-example.feature`);
   }
   console.log("");
   console.log("✅ Specs directory initialized!");
   console.log("");
   console.log("Next steps:");
-  console.log("  1. Edit specs/fs/*.requirement files");
+  console.log("  1. Edit specs/fs/*.feature files");
   console.log("  2. Run `matrix sync` to index files");
   console.log("  3. Run `matrix serve` to start the UI");
 }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@nivora/matrix",
-  "version": "0.2.3",
+  "version": "0.3.1",
   "description": "Requirements documentation system with semantic search",
   "type": "module",
   "bin": {

package/.next/server/app/builder/page.js

@@ -1,24 +0,0 @@
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-    INSERT INTO fs (id, title, file_path, description, requirements,
-                    scenario_count, created_at, updated_at)
-    VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-    ON CONFLICT(id) DO UPDATE SET
-      title = excluded.title,
-      file_path = excluded.file_path,
-      description = excluded.description,
-      requirements = excluded.requirements,
-      scenario_count = excluded.scenario_count,
-      updated_at = excluded.updated_at
-  `).run(e.id,e.title,e.file_path,e.description,JSON.stringify(e.requirements),e.scenario_count,e.created_at,(0,k.lg)()),g.query("DELETE FROM fs_urs_link WHERE fs_id = ?").run(e.id),e.urs_ids))g.query("SELECT id FROM urs WHERE id = ?").get(a)&&g.query(`
-        INSERT OR IGNORE INTO fs_urs_link (fs_id, urs_id) VALUES (?, ?)
-      `).run(e.id,a);return(0,i.revalidatePath)("/"),(0,i.revalidatePath)("/matrix"),(0,i.revalidatePath)("/builder"),{success:!0,id:e.id}}catch(a){return{success:!1,error:String(a)}}}async function m(a){try{let b=(0,j.r_)(a);return(0,i.revalidatePath)("/"),(0,i.revalidatePath)("/matrix"),(0,i.revalidatePath)("/builder"),{success:!0,id:b.id}}catch(a){return{success:!1,error:String(a)}}}async function n(a){try{let b=(0,j.w)(a);return(0,i.revalidatePath)("/"),(0,i.revalidatePath)("/matrix"),(0,i.revalidatePath)("/builder"),{success:!0,id:b.id}}catch(a){return{success:!1,error:String(a)}}}(0,c(9337).D)([l,m,n]),(0,d.A)(l,"6031d978fa85dc0f7a684fd98b31954904e329133d",null),(0,d.A)(m,"40b1c73b0988800e3ec2a1eaad98d4e536e9e0b690",null),(0,d.A)(n,"40df584c8132966889e22d4dda60782c0c28c0272b",null)},142:(a,b,c)=>{"use strict";c.r(b),c.d(b,{default:()=>h,dynamic:()=>g});var d=c(5735),e=c(1081),f=c(1805);let g="force-dynamic";function h(){let 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package/.next/server/app/builder/page.js.nft.json

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package/.next/server/app/builder/page_client-reference-manifest.js

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package/.next/server/app/guide/page.js

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