@niivue/niivue 0.38.9 → 0.39.0

package/dist/index.d.ts

@@ -249,7 +249,8 @@ type ValuesArray = Array<{
     id: string;
     vals: number[];
 }>;
-type AnyNumberArray = number[] | Float64Array | Float32Array | Uint32Array | Uint16Array | Uint8Array | Int32Array | Int16Array | Int8Array;
+type TypedNumberArray = Float64Array | Float32Array | Uint32Array | Uint16Array | Uint8Array | Int32Array | Int16Array | Int8Array;
+type AnyNumberArray = number[] | TypedNumberArray;
 type DefaultMeshType = {
     positions: Float32Array;
     indices: Int32Array;
@@ -260,6 +261,10 @@ type TRACT = {
     offsetPt0: number[];
     dps: ValuesArray;
 };
+type TT = {
+    pts: number[];
+    offsetPt0: number[];
+};
 type TRX = {
     pts: number[];
     offsetPt0: number[];
@@ -269,14 +274,14 @@ type TRX = {
     header: unknown;
 };
 type TRK = {
-    pts: number[];
-    offsetPt0: number[];
+    pts: Float32Array;
+    offsetPt0: Uint32Array;
     dps: ValuesArray;
     dpv: ValuesArray;
 };
 type TCK = {
-    pts: number[];
-    offsetPt0: number[];
+    pts: Float32Array;
+    offsetPt0: Uint32Array;
 };
 type VTK = DefaultMeshType | {
     pts: Float32Array;
@@ -386,14 +391,14 @@ declare class NVMesh {
     opacity: number;
     visible: boolean;
     meshShaderIndex: number;
-    offsetPt0: number[] | null;
+    offsetPt0: number[] | Uint32Array | null;
     colormapInvert: boolean;
     fiberGroupColormap: ColorMap | null;
     indexBuffer: WebGLBuffer;
     vertexBuffer: WebGLBuffer;
     vao: WebGLVertexArrayObject;
-    pts: number[];
-    tris?: number[];
+    pts: number[] | Float32Array;
+    tris?: number[] | Uint32Array;
     layers: NVMeshLayer[];
     type: MeshType;
     data_type?: string;
@@ -440,14 +445,14 @@ declare class NVMesh {
      * @param colorbarVisible - does this mesh display a colorbar
      * @param anatomicalStructurePrimary - region for mesh. Default is an empty string
      */
-    constructor(pts: number[], tris: number[], name: string | undefined, rgba255: number[] | undefined, opacity: number | undefined, visible: boolean | undefined, gl: WebGL2RenderingContext, connectome?: LegacyConnectome | string | null, dpg?: ValuesArray | null, dps?: ValuesArray | null, dpv?: ValuesArray | null, colorbarVisible?: boolean, anatomicalStructurePrimary?: string);
+    constructor(pts: number[] | Float32Array, tris: number[] | Uint32Array, name: string | undefined, rgba255: number[] | undefined, opacity: number | undefined, visible: boolean | undefined, gl: WebGL2RenderingContext, connectome?: LegacyConnectome | string | null, dpg?: ValuesArray | null, dps?: ValuesArray | null, dpv?: ValuesArray | null, colorbarVisible?: boolean, anatomicalStructurePrimary?: string);
     updateFibers(gl: WebGL2RenderingContext): void;
     updateConnectome(gl: WebGL2RenderingContext): void;
     updateMesh(gl: WebGL2RenderingContext): void;
     reverseFaces(gl: WebGL2RenderingContext): void;
     setLayerProperty(id: number, key: keyof NVMeshLayer, val: number | string | boolean, gl: WebGL2RenderingContext): void;
     setProperty(key: keyof this, val: unknown, gl: WebGL2RenderingContext): void;
-    generatePosNormClr(pts: number[], tris: number[], rgba255: number[]): Float32Array;
+    generatePosNormClr(pts: number[] | Float32Array, tris: number[] | Uint32Array, rgba255: number[]): Float32Array;
     static loadConnectomeFromFreeSurfer(json: {
         points?: Point[];
         data_type: string;
@@ -495,1545 +500,11 @@ declare class NVMesh {
     static readTxtVTK(buffer: ArrayBuffer): VTK;
     static readTRK(buffer: ArrayBuffer): TRK;
     static readTCK(buffer: ArrayBuffer): TCK;
+    static readTT(buffer: ArrayBuffer): TT;
     static readTRX(buffer: ArrayBuffer): TRX;
     static readTRACT(buffer: ArrayBuffer): TRACT;
 }
 
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-var kerning = [
-];
-var defaultFontMetrics = {
-	atlas: atlas,
-	metrics: metrics,
-	glyphs: glyphs,
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-};
-
 /**
  * Enum for supported image types (e.g. NII, NRRD, DICOM)
  */
@@ -2274,7 +745,7 @@ declare class NVImage {
     intensityRaw2Scaled(raw: number): number;
     intensityScaled2Raw(scaled: number): number;
     saveToUint8Array(fnm: string, drawing8?: Uint8Array | null): Uint8Array;
-    saveToDisk(fnm: string, drawing8?: Uint8Array | null): Uint8Array;
+    saveToDisk(fnm?: string, drawing8?: Uint8Array | null): Uint8Array;
     static fetchDicomData(url: string, headers?: Record<string, string>): Promise<ArrayBuffer[]>;
     static fetchPartial(url: string, bytesToLoad: number, headers?: Record<string, string>): Promise<Response>;
     /**
@@ -2853,6 +1324,7 @@ declare class NVUtilities {
  */
 declare class NVMeshLoaders {
     static readTRACT(buffer: ArrayBuffer): TRACT;
+    static readTT(buffer: ArrayBuffer): TT;
     static readTRX(buffer: ArrayBuffer): TRX;
     static readTCK(buffer: ArrayBuffer): TCK;
     static readTRK(buffer: ArrayBuffer): TRK;
@@ -2894,15 +1366,6 @@ type DragReleaseParams = {
     tileIdx: number;
     axCorSag: SLICE_TYPE;
 };
-type FontMetrics = {
-    distanceRange: number;
-    size: number;
-    mets: Record<number, {
-        xadv: number;
-        uv_lbwh: number[];
-        lbwh: number[];
-    }>;
-};
 type ColormapListEntry = {
     name: string;
     min: number;
@@ -3037,6 +1500,11 @@ type UIData = {
     loading$: Subject<unknown>;
     dpr?: number;
 };
+type SaveImageOptions = {
+    filename: string;
+    isSaveDrawing: boolean;
+    volumeByIndex: number;
+};
 /**
  * Niivue can be attached to a canvas. An instance of Niivue contains methods for
  * loading and rendering NIFTI image data in a WebGL 2.0 context.
@@ -3102,49 +1570,10 @@ declare class Niivue {
     genericVAO: WebGLVertexArrayObject | null;
     unusedVAO: null;
     crosshairs3D: NiivueObject3D | null;
-    DEFAULT_FONT_GLYPH_SHEET: any;
-    DEFAULT_FONT_METRICS: {
-        atlas: {
-            type: string;
-            distanceRange: number;
-            size: number;
-            width: number;
-            height: number;
-            yOrigin: string;
-        };
-        metrics: {
-            emSize: number;
-            lineHeight: number;
-            ascender: number;
-            descender: number;
-            underlineY: number;
-            underlineThickness: number;
-        };
-        glyphs: ({
-            unicode: number;
-            advance: number;
-            planeBounds?: undefined;
-            atlasBounds?: undefined;
-        } | {
-            unicode: number;
-            advance: number;
-            planeBounds: {
-                left: number;
-                bottom: number;
-                right: number;
-                top: number;
-            };
-            atlasBounds: {
-                left: number;
-                bottom: number;
-                right: number;
-                top: number;
-            };
-        })[];
-        kerning: never[];
-    };
-    fontMetrics?: typeof defaultFontMetrics;
-    fontMets: FontMetrics | null;
+    private DEFAULT_FONT_GLYPH_SHEET;
+    private DEFAULT_FONT_METRICS;
+    private fontMetrics?;
+    private fontMets;
     backgroundMasksOverlays: number;
     overlayOutlineWidth: number;
     overlayAlphaShader: number;
@@ -3766,10 +2195,10 @@ declare class Niivue {
      * @param isSaveDrawing - determines whether drawing or background image is saved
      * @param volumeByIndex - determines layer to save (0 for background)
      * @param volumeByIndex - determines layer to save (0 for background)
-     * @example niivue.saveImage('test.nii', true);
+     * @example niivue.saveImage(\{ filename: "myimage.nii.gz", isSaveDrawing: true \});
      * @see {@link https://niivue.github.io/niivue/features/draw.ui.html|live demo usage}
      */
-    saveImage(fnm: string, isSaveDrawing?: boolean, volumeByIndex?: number): Uint8Array | boolean;
+    saveImage(options?: SaveImageOptions): Uint8Array | boolean;
     getMeshIndexByID(id: string | number): number;
     /**
      * change property of mesh, tractogram or connectome
@@ -4369,7 +2798,7 @@ declare class Niivue {
     mouseClick(x: number, y: number, posChange?: number, isDelta?: boolean): void;
     drawRuler(): void;
     drawRuler10cm(startXYendXY: number[]): void;
-    screenXY2mm(x: number, y: number, forceSlice?: number): vec3;
+    screenXY2mm(x: number, y: number, forceSlice?: number): vec4;
     dragForPanZoom(startXYendXY: number[]): void;
     dragForCenterButton(startXYendXY: number[]): void;
     dragForSlicer3D(startXYendXY: number[]): void;