@niivue/niivue 0.38.8 → 0.38.10
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.d.ts +46 -1594
- package/dist/index.js +290 -252
- package/dist/index.js.map +1 -1
- package/dist/index.min.js +1 -1
- package/dist/niivue.umd.js +1665 -0
- package/package.json +10 -9
- package/src/colortables.ts +4 -3
- package/src/index.html +2 -0
- package/src/logger.ts +53 -20
- package/src/niivue/index.ts +26 -38
- package/src/niivue/utils.ts +1 -4
- package/src/nvconnectome.ts +5 -4
- package/src/nvcontroller.ts +10 -9
- package/src/nvdocument.ts +18 -7
- package/src/nvimage/index.ts +38 -44
- package/src/nvimage/utils.ts +1 -3
- package/src/nvmesh-loaders.ts +50 -56
- package/src/nvmesh.ts +9 -11
- package/src/session-bus.ts +4 -3
- package/src/shader.ts +5 -4
package/dist/index.d.ts
CHANGED
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@@ -499,1541 +499,6 @@ declare class NVMesh {
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static readTRACT(buffer: ArrayBuffer): TRACT;
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}
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distanceRange: 2,
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size: 59.65625,
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width: 512,
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height: 256,
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yOrigin: "bottom"
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};
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var metrics = {
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emSize: 1,
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lineHeight: 1.171875,
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};
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atlasBounds: {
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left: 418.5,
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-
bottom: 54.5,
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right: 438.5,
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-
top: 96.5
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1865
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-
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1866
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-
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1867
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-
{
|
|
1868
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-
unicode: 117,
|
|
1869
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-
advance: 0.55126953125,
|
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-
planeBounds: {
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left: 0.048117572190937666,
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-
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top: 0.5526246460024882
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-
},
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atlasBounds: {
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left: 88.5,
|
|
1878
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-
bottom: 15.5,
|
|
1879
|
-
right: 115.5,
|
|
1880
|
-
top: 50.5
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|
1881
|
-
}
|
|
1882
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-
},
|
|
1883
|
-
{
|
|
1884
|
-
unicode: 118,
|
|
1885
|
-
advance: 0.484375,
|
|
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-
planeBounds: {
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-
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-
right: 0.4840259901699188,
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-
top: 0.5491261070095601
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-
},
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-
atlasBounds: {
|
|
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-
left: 331.5,
|
|
1894
|
-
bottom: 16.5,
|
|
1895
|
-
right: 360.5,
|
|
1896
|
-
top: 50.5
|
|
1897
|
-
}
|
|
1898
|
-
},
|
|
1899
|
-
{
|
|
1900
|
-
unicode: 119,
|
|
1901
|
-
advance: 0.75146484375,
|
|
1902
|
-
planeBounds: {
|
|
1903
|
-
left: -0.002649098431770561,
|
|
1904
|
-
bottom: -0.02080579450955998,
|
|
1905
|
-
right: 0.7516725359317705,
|
|
1906
|
-
top: 0.5491261070095601
|
|
1907
|
-
},
|
|
1908
|
-
atlasBounds: {
|
|
1909
|
-
left: 225.5,
|
|
1910
|
-
bottom: 16.5,
|
|
1911
|
-
right: 270.5,
|
|
1912
|
-
top: 50.5
|
|
1913
|
-
}
|
|
1914
|
-
},
|
|
1915
|
-
{
|
|
1916
|
-
unicode: 120,
|
|
1917
|
-
advance: 0.49560546875,
|
|
1918
|
-
planeBounds: {
|
|
1919
|
-
left: -0.0046143729128470395,
|
|
1920
|
-
bottom: -0.02080579450955998,
|
|
1921
|
-
right: 0.4982667166628471,
|
|
1922
|
-
top: 0.5491261070095601
|
|
1923
|
-
},
|
|
1924
|
-
atlasBounds: {
|
|
1925
|
-
left: 300.5,
|
|
1926
|
-
bottom: 16.5,
|
|
1927
|
-
right: 330.5,
|
|
1928
|
-
top: 50.5
|
|
1929
|
-
}
|
|
1930
|
-
},
|
|
1931
|
-
{
|
|
1932
|
-
unicode: 121,
|
|
1933
|
-
advance: 0.47314453125,
|
|
1934
|
-
planeBounds: {
|
|
1935
|
-
left: -0.007219349544918806,
|
|
1936
|
-
bottom: -0.23645281704262702,
|
|
1937
|
-
right: 0.4788990370449188,
|
|
1938
|
-
top: 0.551394223292627
|
|
1939
|
-
},
|
|
1940
|
-
atlasBounds: {
|
|
1941
|
-
left: 387.5,
|
|
1942
|
-
bottom: 208.5,
|
|
1943
|
-
right: 416.5,
|
|
1944
|
-
top: 255.5
|
|
1945
|
-
}
|
|
1946
|
-
},
|
|
1947
|
-
{
|
|
1948
|
-
unicode: 122,
|
|
1949
|
-
advance: 0.49560546875,
|
|
1950
|
-
planeBounds: {
|
|
1951
|
-
left: 0.018007705073009427,
|
|
1952
|
-
bottom: -0.02080579450955998,
|
|
1953
|
-
right: 0.4873633886769906,
|
|
1954
|
-
top: 0.5491261070095601
|
|
1955
|
-
},
|
|
1956
|
-
atlasBounds: {
|
|
1957
|
-
left: 271.5,
|
|
1958
|
-
bottom: 16.5,
|
|
1959
|
-
right: 299.5,
|
|
1960
|
-
top: 50.5
|
|
1961
|
-
}
|
|
1962
|
-
},
|
|
1963
|
-
{
|
|
1964
|
-
unicode: 123,
|
|
1965
|
-
advance: 0.33837890625,
|
|
1966
|
-
planeBounds: {
|
|
1967
|
-
left: 0.011572188891435306,
|
|
1968
|
-
bottom: -0.20234398020069408,
|
|
1969
|
-
right: 0.3468262486085647,
|
|
1970
|
-
top: 0.8034181989506942
|
|
1971
|
-
},
|
|
1972
|
-
atlasBounds: {
|
|
1973
|
-
left: 73.5,
|
|
1974
|
-
bottom: 195.5,
|
|
1975
|
-
right: 93.5,
|
|
1976
|
-
top: 255.5
|
|
1977
|
-
}
|
|
1978
|
-
},
|
|
1979
|
-
{
|
|
1980
|
-
unicode: 124,
|
|
1981
|
-
advance: 0.24365234375,
|
|
1982
|
-
planeBounds: {
|
|
1983
|
-
left: 0.06315671142450235,
|
|
1984
|
-
bottom: -0.15466084787519643,
|
|
1985
|
-
right: 0.18049563232549765,
|
|
1986
|
-
top: 0.7337624103751964
|
|
1987
|
-
},
|
|
1988
|
-
atlasBounds: {
|
|
1989
|
-
left: 206.5,
|
|
1990
|
-
bottom: 202.5,
|
|
1991
|
-
right: 213.5,
|
|
1992
|
-
top: 255.5
|
|
1993
|
-
}
|
|
1994
|
-
},
|
|
1995
|
-
{
|
|
1996
|
-
unicode: 125,
|
|
1997
|
-
advance: 0.33837890625,
|
|
1998
|
-
planeBounds: {
|
|
1999
|
-
left: -0.010156326733564695,
|
|
2000
|
-
bottom: -0.20234398020069408,
|
|
2001
|
-
right: 0.3250977329835647,
|
|
2002
|
-
top: 0.8034181989506942
|
|
2003
|
-
},
|
|
2004
|
-
atlasBounds: {
|
|
2005
|
-
left: 38.5,
|
|
2006
|
-
bottom: 195.5,
|
|
2007
|
-
right: 58.5,
|
|
2008
|
-
top: 255.5
|
|
2009
|
-
}
|
|
2010
|
-
},
|
|
2011
|
-
{
|
|
2012
|
-
unicode: 126,
|
|
2013
|
-
advance: 0.68017578125,
|
|
2014
|
-
planeBounds: {
|
|
2015
|
-
left: 0.046984728997511785,
|
|
2016
|
-
bottom: 0.1766063915990047,
|
|
2017
|
-
right: 0.6336793335024882,
|
|
2018
|
-
top: 0.4112842334009953
|
|
2019
|
-
},
|
|
2020
|
-
atlasBounds: {
|
|
2021
|
-
left: 0.5,
|
|
2022
|
-
bottom: 0.5,
|
|
2023
|
-
right: 35.5,
|
|
2024
|
-
top: 14.5
|
|
2025
|
-
}
|
|
2026
|
-
}
|
|
2027
|
-
];
|
|
2028
|
-
var kerning = [
|
|
2029
|
-
];
|
|
2030
|
-
var defaultFontMetrics = {
|
|
2031
|
-
atlas: atlas,
|
|
2032
|
-
metrics: metrics,
|
|
2033
|
-
glyphs: glyphs,
|
|
2034
|
-
kerning: kerning
|
|
2035
|
-
};
|
|
2036
|
-
|
|
2037
502
|
/**
|
|
2038
503
|
* Enum for supported image types (e.g. NII, NRRD, DICOM)
|
|
2039
504
|
*/
|
|
@@ -2143,7 +608,6 @@ declare class NVImage {
|
|
|
2143
608
|
ignoreZeroVoxels: boolean;
|
|
2144
609
|
trustCalMinMax: boolean;
|
|
2145
610
|
colormapNegative: string;
|
|
2146
|
-
colorMapNegative: string;
|
|
2147
611
|
colormapLabel: LUT | null;
|
|
2148
612
|
colormapInvert?: boolean;
|
|
2149
613
|
nFrame4D?: number;
|
|
@@ -2447,7 +911,7 @@ type NVConfigOptions = {
|
|
|
2447
911
|
sagittalNoseLeft: boolean;
|
|
2448
912
|
isSliceMM: boolean;
|
|
2449
913
|
isHighResolutionCapable: boolean;
|
|
2450
|
-
|
|
914
|
+
logLevel: 'debug' | 'info' | 'warn' | 'error' | 'fatal' | 'silent';
|
|
2451
915
|
loadingText: string;
|
|
2452
916
|
dragAndDropEnabled: boolean;
|
|
2453
917
|
drawingEnabled: boolean;
|
|
@@ -2468,6 +932,7 @@ type NVConfigOptions = {
|
|
|
2468
932
|
multiplanarLayout: MULTIPLANAR_TYPE;
|
|
2469
933
|
renderOverlayBlend: number;
|
|
2470
934
|
};
|
|
935
|
+
declare const DEFAULT_OPTIONS: NVConfigOptions;
|
|
2471
936
|
type SceneData = {
|
|
2472
937
|
azimuth: number;
|
|
2473
938
|
elevation: number;
|
|
@@ -2848,6 +1313,41 @@ declare class NVUtilities {
|
|
|
2848
1313
|
static range(start: number, stop: number, step: number): number[];
|
|
2849
1314
|
}
|
|
2850
1315
|
|
|
1316
|
+
/**
|
|
1317
|
+
* Class to load different mesh formats
|
|
1318
|
+
*/
|
|
1319
|
+
declare class NVMeshLoaders {
|
|
1320
|
+
static readTRACT(buffer: ArrayBuffer): TRACT;
|
|
1321
|
+
static readTRX(buffer: ArrayBuffer): TRX;
|
|
1322
|
+
static readTCK(buffer: ArrayBuffer): TCK;
|
|
1323
|
+
static readTRK(buffer: ArrayBuffer): TRK;
|
|
1324
|
+
static readTxtVTK(buffer: ArrayBuffer): VTK;
|
|
1325
|
+
static readLayer(name: string, buffer: ArrayBuffer, nvmesh: NVMesh, opacity?: number, colormap?: string, colormapNegative?: string, useNegativeCmap?: boolean, cal_min?: number | null, cal_max?: number | null, isOutlineBorder?: boolean): void;
|
|
1326
|
+
static readSMP(buffer: ArrayBuffer, n_vert: number): Float32Array;
|
|
1327
|
+
static readSTC(buffer: ArrayBuffer, n_vert: number): Float32Array;
|
|
1328
|
+
static readCURV(buffer: ArrayBuffer, n_vert: number): Float32Array;
|
|
1329
|
+
static readANNOT(buffer: ArrayBuffer, n_vert: number, isReadColortables?: boolean): ANNOT;
|
|
1330
|
+
static readNV(buffer: ArrayBuffer): DefaultMeshType;
|
|
1331
|
+
static readASC(buffer: ArrayBuffer): DefaultMeshType;
|
|
1332
|
+
static readVTK(buffer: ArrayBuffer): VTK;
|
|
1333
|
+
static readDFS(buffer: ArrayBuffer): DefaultMeshType;
|
|
1334
|
+
static readMZ3(buffer: ArrayBuffer, n_vert?: number): MZ3;
|
|
1335
|
+
static readPLY(buffer: ArrayBuffer): DefaultMeshType;
|
|
1336
|
+
static readICO(buffer: ArrayBuffer): DefaultMeshType;
|
|
1337
|
+
static readGEO(buffer: ArrayBuffer, isFlipWinding?: boolean): DefaultMeshType;
|
|
1338
|
+
static readOFF(buffer: ArrayBuffer): DefaultMeshType;
|
|
1339
|
+
static readOBJ(buffer: ArrayBuffer): DefaultMeshType;
|
|
1340
|
+
static readFreeSurfer(buffer: ArrayBuffer): DefaultMeshType;
|
|
1341
|
+
static readSRF(buffer: ArrayBuffer): DefaultMeshType;
|
|
1342
|
+
static readTxtSTL(buffer: ArrayBuffer): DefaultMeshType;
|
|
1343
|
+
static readSTL(buffer: ArrayBuffer): DefaultMeshType;
|
|
1344
|
+
static readNII2(buffer: ArrayBuffer, n_vert?: number, anatomicalStructurePrimary?: string): Int32Array | Float32Array | Int16Array | Uint8Array;
|
|
1345
|
+
static readNII(buffer: ArrayBuffer, n_vert?: number, anatomicalStructurePrimary?: string): Float32Array | Uint8Array | Int32Array | Int16Array;
|
|
1346
|
+
static readMGH(buffer: ArrayBuffer, n_vert?: number, isReadColortables?: boolean): MGH;
|
|
1347
|
+
static readX3D(buffer: ArrayBuffer): X3D;
|
|
1348
|
+
static readGII(buffer: ArrayBuffer, n_vert?: number): GII;
|
|
1349
|
+
}
|
|
1350
|
+
|
|
2851
1351
|
type DragReleaseParams = {
|
|
2852
1352
|
fracStart: vec3;
|
|
2853
1353
|
fracEnd: vec3;
|
|
@@ -2859,15 +1359,6 @@ type DragReleaseParams = {
|
|
|
2859
1359
|
tileIdx: number;
|
|
2860
1360
|
axCorSag: SLICE_TYPE;
|
|
2861
1361
|
};
|
|
2862
|
-
type FontMetrics = {
|
|
2863
|
-
distanceRange: number;
|
|
2864
|
-
size: number;
|
|
2865
|
-
mets: Record<number, {
|
|
2866
|
-
xadv: number;
|
|
2867
|
-
uv_lbwh: number[];
|
|
2868
|
-
lbwh: number[];
|
|
2869
|
-
}>;
|
|
2870
|
-
};
|
|
2871
1362
|
type ColormapListEntry = {
|
|
2872
1363
|
name: string;
|
|
2873
1364
|
min: number;
|
|
@@ -2953,7 +1444,7 @@ type NiiVueOptions = {
|
|
|
2953
1444
|
doubleTouchTimeout?: number;
|
|
2954
1445
|
longTouchTimeout?: number;
|
|
2955
1446
|
isRadiologicalConvention?: boolean;
|
|
2956
|
-
|
|
1447
|
+
logLevel?: 'debug' | 'info' | 'warn' | 'error' | 'fatal' | 'silent';
|
|
2957
1448
|
loadingText?: string;
|
|
2958
1449
|
dragAndDropEnabled?: boolean;
|
|
2959
1450
|
isNearestInterpolation?: boolean;
|
|
@@ -3067,49 +1558,10 @@ declare class Niivue {
|
|
|
3067
1558
|
genericVAO: WebGLVertexArrayObject | null;
|
|
3068
1559
|
unusedVAO: null;
|
|
3069
1560
|
crosshairs3D: NiivueObject3D | null;
|
|
3070
|
-
DEFAULT_FONT_GLYPH_SHEET
|
|
3071
|
-
DEFAULT_FONT_METRICS
|
|
3072
|
-
|
|
3073
|
-
|
|
3074
|
-
distanceRange: number;
|
|
3075
|
-
size: number;
|
|
3076
|
-
width: number;
|
|
3077
|
-
height: number;
|
|
3078
|
-
yOrigin: string;
|
|
3079
|
-
};
|
|
3080
|
-
metrics: {
|
|
3081
|
-
emSize: number;
|
|
3082
|
-
lineHeight: number;
|
|
3083
|
-
ascender: number;
|
|
3084
|
-
descender: number;
|
|
3085
|
-
underlineY: number;
|
|
3086
|
-
underlineThickness: number;
|
|
3087
|
-
};
|
|
3088
|
-
glyphs: ({
|
|
3089
|
-
unicode: number;
|
|
3090
|
-
advance: number;
|
|
3091
|
-
planeBounds?: undefined;
|
|
3092
|
-
atlasBounds?: undefined;
|
|
3093
|
-
} | {
|
|
3094
|
-
unicode: number;
|
|
3095
|
-
advance: number;
|
|
3096
|
-
planeBounds: {
|
|
3097
|
-
left: number;
|
|
3098
|
-
bottom: number;
|
|
3099
|
-
right: number;
|
|
3100
|
-
top: number;
|
|
3101
|
-
};
|
|
3102
|
-
atlasBounds: {
|
|
3103
|
-
left: number;
|
|
3104
|
-
bottom: number;
|
|
3105
|
-
right: number;
|
|
3106
|
-
top: number;
|
|
3107
|
-
};
|
|
3108
|
-
})[];
|
|
3109
|
-
kerning: never[];
|
|
3110
|
-
};
|
|
3111
|
-
fontMetrics?: typeof defaultFontMetrics;
|
|
3112
|
-
fontMets: FontMetrics | null;
|
|
1561
|
+
private DEFAULT_FONT_GLYPH_SHEET;
|
|
1562
|
+
private DEFAULT_FONT_METRICS;
|
|
1563
|
+
private fontMetrics?;
|
|
1564
|
+
private fontMets;
|
|
3113
1565
|
backgroundMasksOverlays: number;
|
|
3114
1566
|
overlayOutlineWidth: number;
|
|
3115
1567
|
overlayAlphaShader: number;
|
|
@@ -3123,7 +1575,7 @@ declare class Niivue {
|
|
|
3123
1575
|
eventsToSubjects: Record<string, Subject<unknown>>;
|
|
3124
1576
|
back: NVImage | null;
|
|
3125
1577
|
overlays: NVImage[];
|
|
3126
|
-
deferredVolumes:
|
|
1578
|
+
deferredVolumes: ImageFromUrlOptions[];
|
|
3127
1579
|
deferredMeshes: LoadFromUrlParams[];
|
|
3128
1580
|
furthestVertexFromOrigin: number;
|
|
3129
1581
|
volScale: number[];
|
|
@@ -3362,7 +1814,7 @@ declare class Niivue {
|
|
|
3362
1814
|
sagittalNoseLeft: boolean;
|
|
3363
1815
|
isSliceMM: boolean;
|
|
3364
1816
|
isHighResolutionCapable: boolean;
|
|
3365
|
-
|
|
1817
|
+
logLevel: "debug" | "info" | "warn" | "error" | "fatal" | "silent";
|
|
3366
1818
|
loadingText: string;
|
|
3367
1819
|
dragAndDropEnabled: boolean;
|
|
3368
1820
|
drawingEnabled: boolean;
|
|
@@ -4038,7 +2490,7 @@ declare class Niivue {
|
|
|
4038
2490
|
* niivue.loadVolumes([\{url: 'someImage.nii.gz\}, \{url: 'anotherImage.nii.gz\'\}])
|
|
4039
2491
|
* @see {@link https://niivue.github.io/niivue/features/mask.html|live demo usage}
|
|
4040
2492
|
*/
|
|
4041
|
-
loadVolumes(volumeList:
|
|
2493
|
+
loadVolumes(volumeList: ImageFromUrlOptions[]): Promise<this>;
|
|
4042
2494
|
/**
|
|
4043
2495
|
* Add mesh and notify subscribers
|
|
4044
2496
|
* @see {@link https://niivue.github.io/niivue/features/multiuser.meshes.html|live demo usage}
|
|
@@ -4442,4 +2894,4 @@ declare class Niivue {
|
|
|
4442
2894
|
set gl(gl: WebGL2RenderingContext | null);
|
|
4443
2895
|
}
|
|
4444
2896
|
|
|
4445
|
-
export { LabelLineTerminator, LabelTextAlignment, NVController, NVDocument, NVImage, NVImageFromUrlOptions, NVLabel3D, NVLabel3DStyle, NVMesh, NVMeshFromUrlOptions, NVUtilities, Niivue, SLICE_TYPE, cmapper, ColorTables as colortables };
|
|
2897
|
+
export { DEFAULT_OPTIONS, DRAG_MODE, type DocumentData, type ExportDocumentData, LabelLineTerminator, LabelTextAlignment, MULTIPLANAR_TYPE, NVController, NVDocument, NVImage, NVImageFromUrlOptions, NVLabel3D, NVLabel3DStyle, NVMesh, NVMeshFromUrlOptions, NVMeshLoaders, NVUtilities, Niivue, SLICE_TYPE, cmapper, ColorTables as colortables };
|