@nifrajs/cli 1.6.0 → 1.12.0

package/dist/cli.js

@@ -46,7 +46,7 @@ Usage:
                                          agent: nifra_context, nifra_routes (routes+schemas as JSON),
                                          nifra_run (backend), nifra_render (SSR a page), nifra_docs,
                                          nifra_example (verified snippets), nifra_scaffold (route→file),
-                                         nifra_check (drift gate + fixes), nifra_doctor (undeclared deps).
+                                         nifra_check (drift gate + fixes), nifra_doctor (deps + duplicate installs).
   nifra docs-mcp [--port <n>]            Serve the PUBLIC docs MCP over HTTP (nifra_docs + nifra_example) —
                                          self-host on a VPS so any remote agent can learn nifra. Default :8787.
   nifra check   [--json] [--lints-only]  Gate: typecheck + lints (hand-rolled fetch(), untyped client("…"),
@@ -59,9 +59,34 @@ Usage:
                                          request field or a removed response field breaks; widening a
                                          request enum or adding a response field doesn't) and fails
                                          closed. Exits non-zero on any breaking change — run it in CI.
-  nifra doctor  [--json] [--auto-fix]    Flag packages imported in source but missing from package.json
-                                         (resolve at Bun runtime, break tsc + standalone install);
+  nifra assure  [--config <file>] [--json]  Route-assurance gate: load nifra.assurance.ts, classify every
+                                         reflected backend route, and fail when required enforcement
+                                         evidence is missing/forbidden or a route is unclassified.
+  nifra capabilities snapshot [--out <file>] [--config <file>]
+                                         Write the deterministic, token-only capability lockfile, but
+                                         only after provenance + idempotency assurance passes.
+  nifra capabilities check [--lockfile <file>] [--config <file>] [--json]
+                                         CI gate: fail on raw effect-import bypasses, declaration/evidence
+                                         drift, unsafe GET/HEAD writes, idempotency gaps, or lockfile drift.
+  nifra manifest emit [--out <file>] [--config <file>] [--sign <key-ref>]
+                                         Emit a deterministic route trust artifact after assurance passes;
+                                         optionally write an Ed25519 signature via the configured KMS signer.
+  nifra manifest diff <before> <after> [--json]
+                                         Hash-verify and compare two manifests; fail on contract, assurance,
+                                         capability, or response-classification regressions.
+  nifra levels  [--json] [--min <n>] [--config <file>]
+                                         Compute the verification ladder (L0 typed contract → L1 route
+                                         assurance → L2 capability lockfile → L3 route manifest → L4
+                                         invariant-tested); --min <n> fails the exit code below level n.
+  nifra doctor  [--json] [--auto-fix]    Flag undeclared imports and multiple physical copies of
+                                         @nifrajs/core/React identity-sensitive dependencies;
                                          --auto-fix writes safe local-version dependency fixes.
+  nifra upgrade <version>                Run the per-release upgrade recipe for <version>: sweep every
+                [--write] [--no-verify]  matching dependency pin (preserving ^/~/exact) + apply exact
+                [--list] [--json]        import moves across the workspace, then verify with nifra check.
+                                         Dry-run by default; --write applies then verifies (--no-verify
+                                         to skip). --list shows available targets. Fail-closed on an
+                                         unknown version. Deterministic + idempotent.
   nifra port    [--target <t>] [--json]  Portability linter: print a feature × deploy-target capability
                 [--ci] [--strict]        matrix (in-memory stores, in-process cron/WebSocket, Bun/Deno
                                          globals, node: builtins) with file:line evidence. --target auto-
@@ -75,7 +100,7 @@ routes/ from the current directory. Run from your project root.
 Port: \`dev\` and \`start\` share the default ${DEFAULT_DEV_PORT}. Override with \`--port <n>\` (alias \`-p\`) or the
 \`PORT\` env var (\`--port\` wins over \`PORT\`, which wins over the default).`;
 // Kept in lockstep with packages/cli/package.json by check:publish's version-consistency gate.
-const CLI_VERSION = "1.6.0";
+const CLI_VERSION = "1.12.0";
 // A render adapter + nifra server are opaque to the CLI (it just forwards them); cast at the seam.
 const asAdapter = (v) => v;
 const asBunPlugins = (v) => v;
@@ -160,21 +185,24 @@ async function buildForTarget(app, target, report) {
     if (report)
         console.log(`\n${renderSizeReport(result.size)}`);
 }
-/** Build a fetch-capable app instance for the `static` target's prerender pass. Mirrors `nifra start`:
- * register the framework's SSR Bun plugins (so `.vue`/`.svelte`/Solid routes import), discover routes,
- * and wire the in-process backend so build-time loaders can read data. The returned `Server` already
- * satisfies `buildTarget`'s `PrerenderAppLike` (a `fetch(req)` yielding a `Response`). */
+/** Build the app FACTORY for the `static` target's prerender pass. Mirrors `nifra start`: register the
+ * framework's SSR Bun plugins (so `.vue`/`.svelte`/Solid routes import) once, then return a factory that
+ * `createWebApp`s the app for the client build's manifest. The client entry MUST be the real content-hashed
+ * bundle (`client.entry`) — it's the hydration `<script src>` the prerendered HTML emits, so a placeholder
+ * would 404 and the pages would render but never hydrate (inert controls). Styles/route-preload are wired
+ * from the same manifest so the static HTML matches what `nifra start` serves. */
 async function buildPrerenderApp(app) {
     const { plugin } = await import("bun");
     const { framework: fw, routesDir, backend } = app;
     for (const p of asBunPlugins(await resolvePlugins(fw.serverPlugins)))
         plugin(p);
-    return createWebApp({
+    return (client) => createWebApp({
         adapter: asAdapter(fw.adapter),
         manifest: discoverRoutes(routesDir),
-        // The client entry is irrelevant to the static HTML (it's a hydration script tag) — a placeholder
-        // is fine; the real hashed bundle is emitted to /assets by buildTarget's client build.
-        clientEntry: "/assets/_nifra-entry.js",
+        clientEntry: client.entry,
+        ...(client.routes ? { routePreload: client.routes } : {}),
+        ...(client.css ? { styles: client.css } : {}),
+        ...(client.routeStyles ? { routeStyles: client.routeStyles } : {}),
         ...apiOf(backend),
     });
 }
@@ -343,6 +371,165 @@ async function main() {
         }
         return;
     }
+    // Route assurance intentionally loads only its explicit config (which imports the backend it audits),
+    // not the full SSR app. Like snapshot/diff, this works for API-only projects.
+    if (command === "assure") {
+        const { runAssurance } = await import("./assure.js");
+        const configIdx = argv.indexOf("--config");
+        const config = configIdx !== -1 ? argv[configIdx + 1] : undefined;
+        if (configIdx !== -1 && (config === undefined || config.startsWith("-"))) {
+            console.error("[nifra] --config needs a file path");
+            process.exitCode = 1;
+            return;
+        }
+        try {
+            if (!(await runAssurance(process.cwd(), {
+                json: argv.includes("--json"),
+                ...(config !== undefined ? { config } : {}),
+            })))
+                process.exitCode = 1;
+        }
+        catch (err) {
+            console.error(err instanceof Error ? err.message : String(err));
+            process.exitCode = 1;
+        }
+        return;
+    }
+    if (command === "capabilities") {
+        const action = argv[1];
+        const valueAfter = (flag) => {
+            const index = argv.indexOf(flag);
+            const value = index === -1 ? undefined : argv[index + 1];
+            if (index !== -1 && (value === undefined || value.startsWith("-"))) {
+                throw new Error(`[nifra] ${flag} needs a file path`);
+            }
+            return value;
+        };
+        try {
+            const { runCapabilityCheck, runCapabilitySnapshot } = await import("./capabilities-tool.js");
+            const config = valueAfter("--config");
+            if (action === "snapshot") {
+                const out = valueAfter("--out");
+                if (!(await runCapabilitySnapshot(process.cwd(), {
+                    ...(config !== undefined ? { config } : {}),
+                    ...(out !== undefined ? { out } : {}),
+                })))
+                    process.exitCode = 1;
+            }
+            else if (action === "check") {
+                const lockfile = valueAfter("--lockfile");
+                if (!(await runCapabilityCheck(process.cwd(), {
+                    ...(config !== undefined ? { config } : {}),
+                    ...(lockfile !== undefined ? { lockfile } : {}),
+                    json: argv.includes("--json"),
+                })))
+                    process.exitCode = 1;
+            }
+            else {
+                throw new Error("[nifra] capabilities needs `snapshot` or `check`");
+            }
+        }
+        catch (err) {
+            console.error(err instanceof Error ? err.message : String(err));
+            process.exitCode = 1;
+        }
+        return;
+    }
+    if (command === "manifest") {
+        const action = argv[1];
+        const valueAfter = (flag) => {
+            const index = argv.indexOf(flag);
+            const value = index === -1 ? undefined : argv[index + 1];
+            if (index !== -1 && (value === undefined || value.startsWith("-"))) {
+                throw new Error(`[nifra] ${flag} needs a value`);
+            }
+            return value;
+        };
+        try {
+            const { runManifestDiff, runManifestEmit } = await import("./manifest-tool.js");
+            if (action === "emit") {
+                const config = valueAfter("--config");
+                const out = valueAfter("--out");
+                const sign = valueAfter("--sign");
+                if (!(await runManifestEmit(process.cwd(), {
+                    ...(config !== undefined ? { config } : {}),
+                    ...(out !== undefined ? { out } : {}),
+                    ...(sign !== undefined ? { sign } : {}),
+                })))
+                    process.exitCode = 1;
+            }
+            else if (action === "diff") {
+                const paths = argv.slice(2).filter((arg) => !arg.startsWith("-"));
+                if (paths.length !== 2)
+                    throw new Error("[nifra] manifest diff needs <before> <after>");
+                if (!(await runManifestDiff(process.cwd(), paths[0], paths[1], {
+                    json: argv.includes("--json"),
+                })))
+                    process.exitCode = 1;
+            }
+            else {
+                throw new Error("[nifra] manifest needs `emit` or `diff`");
+            }
+        }
+        catch (err) {
+            console.error(err instanceof Error ? err.message : String(err));
+            process.exitCode = 1;
+        }
+        return;
+    }
+    if (command === "levels") {
+        const valueAfter = (flag) => {
+            const index = argv.indexOf(flag);
+            const value = index === -1 ? undefined : argv[index + 1];
+            if (index !== -1 && (value === undefined || value.startsWith("-"))) {
+                throw new Error(`[nifra] ${flag} needs a value`);
+            }
+            return value;
+        };
+        try {
+            const { runLevels } = await import("./levels-tool.js");
+            const config = valueAfter("--config");
+            const minRaw = valueAfter("--min");
+            const min = minRaw === undefined ? undefined : Number(minRaw);
+            if (min !== undefined && (!Number.isInteger(min) || min < 0 || min > 4)) {
+                throw new Error("[nifra] --min must be an integer level between 0 and 4");
+            }
+            if (!(await runLevels(process.cwd(), {
+                json: argv.includes("--json"),
+                ...(config !== undefined ? { config } : {}),
+                ...(min !== undefined ? { min } : {}),
+            })))
+                process.exitCode = 1;
+        }
+        catch (err) {
+            console.error(err instanceof Error ? err.message : String(err));
+            process.exitCode = 1;
+        }
+        return;
+    }
+    // `upgrade` is a pure cwd file-transformer (package.json pins + import moves) driven by a per-release
+    // recipe, then verified with `nifra check`. Dispatch before the eager `loadApp` — it must run on any
+    // repo (API-only, not built, or mid-upgrade with edits that don't yet typecheck under dry-run).
+    if (command === "upgrade") {
+        const { runUpgrade } = await import("./upgrade.js");
+        const version = argv.slice(1).find((arg) => !arg.startsWith("-"));
+        try {
+            const ok = await runUpgrade(process.cwd(), {
+                ...(version !== undefined ? { version } : {}),
+                write: argv.includes("--write"),
+                json: argv.includes("--json"),
+                list: argv.includes("--list"),
+                verify: !argv.includes("--no-verify"),
+            });
+            if (!ok)
+                process.exitCode = 1;
+        }
+        catch (err) {
+            console.error(err instanceof Error ? err.message : String(err));
+            process.exitCode = 1;
+        }
+        return;
+    }
     // `port` is a pure cwd-based portability linter (scans source, doesn't run the app) — like `check`/
     // `doctor`, dispatch before the eager `loadApp` so it runs on an API-only / not-yet-built project.
     if (command === "port") {

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package/dist/doctor.d.ts

@@ -24,11 +24,25 @@ export interface DoctorResult {
     /** `false` when no `package.json` was found at cwd — doctor can't run (reported, not a crash). */
     readonly ran: boolean;
     readonly findings: readonly DoctorFinding[];
+    /** Packages that resolve to more than one physical install across this workspace. */
+    readonly duplicateInstalls: readonly DuplicateInstallFinding[];
     /** Dependencies written by `--auto-fix` / MCP `autoFix:true`. */
     readonly fixed?: readonly DoctorAppliedFix[];
     /** Findings that were safe to report but not safe to write automatically. */
     readonly skippedFixes?: readonly DoctorSkippedFix[];
 }
+export interface DuplicateInstallCopy {
+    /** Installed version, or `unknown` when package metadata is incomplete. */
+    readonly version: string;
+    /** Physical package directory, relative to the doctor root when possible. */
+    readonly path: string;
+    /** Workspace package roots whose normal Node/Bun resolution selects this copy. */
+    readonly importers: readonly string[];
+}
+export interface DuplicateInstallFinding {
+    readonly package: string;
+    readonly copies: readonly DuplicateInstallCopy[];
+}
 export interface DoctorAppliedFix {
     readonly package: string;
     readonly field: "dependencies";
@@ -40,6 +54,9 @@ export interface DoctorSkippedFix {
     readonly reason: string;
     readonly command: readonly string[];
 }
+/** Find identity-sensitive dependencies that resolve to multiple physical directories. Two copies at
+ * the same version still fail: module identity (React hooks, Nifra symbols/registries) is path-based. */
+export declare function collectDuplicateInstalls(cwd: string, rootPackage: Record<string, unknown>): Promise<DuplicateInstallFinding[]>;
 /** Run doctor against the project at `cwd`: diff source imports vs declared deps. */
 export declare function collectDoctorResult(cwd: string): Promise<DoctorResult>;
 /** Safely add undeclared imports to package.json when the version can be inferred without network I/O. */

package/dist/doctor.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../src/doctor.ts"],"names":[],"mappings":"AAeA,OAAO,EAAE,KAAK,aAAa,EAA6B,MAAM,YAAY,CAAA;AAiC1E;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,GAAG,SAAS,CAY1D;AAED;8DAC8D;AAC9D,wBAAgB,YAAY,CAC1B,KAAK,EAAE,QAAQ,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC,GAAG,SAAS,GACnD,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAK3B;AAED;;;GAGG;AACH,wBAAgB,qBAAqB,CACnC,IAAI,EAAE,MAAM,EACZ,OAAO,EAAE,MAAM,EACf,QAAQ,EAAE,WAAW,CAAC,MAAM,CAAC,EAC7B,OAAO,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,GACjC,aAAa,EAAE,CAmBjB;AAED,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAA;IACrB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAA;IACrB,2EAA2E;IAC3E,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;CACzB;AAED,MAAM,WAAW,YAAY;IAC3B,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAA;IACpB,kGAAkG;IAClG,QAAQ,CAAC,GAAG,EAAE,OAAO,CAAA;IACrB,QAAQ,CAAC,QAAQ,EAAE,SAAS,aAAa,EAAE,CAAA;IAC3C,qFAAqF;IACrF,QAAQ,CAAC,iBAAiB,EAAE,SAAS,uBAAuB,EAAE,CAAA;IAC9D,iEAAiE;IACjE,QAAQ,CAAC,KAAK,CAAC,EAAE,SAAS,gBAAgB,EAAE,CAAA;IAC5C,6EAA6E;IAC7E,QAAQ,CAAC,YAAY,CAAC,EAAE,SAAS,gBAAgB,EAAE,CAAA;CACpD;AAED,MAAM,WAAW,oBAAoB;IACnC,2EAA2E;IAC3E,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;IACxB,6EAA6E;IAC7E,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAA;IACrB,kFAAkF;IAClF,QAAQ,CAAC,SAAS,EAAE,SAAS,MAAM,EAAE,CAAA;CACtC;AAED,MAAM,WAAW,uBAAuB;IACtC,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;IACxB,QAAQ,CAAC,MAAM,EAAE,SAAS,oBAAoB,EAAE,CAAA;CACjD;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;IACxB,QAAQ,CAAC,KAAK,EAAE,cAAc,CAAA;IAC9B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;IACxB,QAAQ,CAAC,MAAM,EAAE,uBAAuB,GAAG,wBAAwB,CAAA;CACpE;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;IACxB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAA;IACvB,QAAQ,CAAC,OAAO,EAAE,SAAS,MAAM,EAAE,CAAA;CACpC;AA2GD;yGACyG;AACzG,wBAAsB,wBAAwB,CAC5C,GAAG,EAAE,MAAM,EACX,WAAW,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GACnC,OAAO,CAAC,uBAAuB,EAAE,CAAC,CAqCpC;AAyDD,qFAAqF;AACrF,wBAAsB,mBAAmB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CA8B5E;AAED,0GAA0G;AAC1G,wBAAsB,kBAAkB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CAqD3E;AAED,6FAA6F;AAC7F,wBAAsB,SAAS,CAC7B,GAAG,EAAE,MAAM,EACX,IAAI,GAAE;IAAE,QAAQ,CAAC,IAAI,CAAC,EAAE,OAAO,CAAC;IAAC,QAAQ,CAAC,OAAO,CAAC,EAAE,OAAO,CAAA;CAAO,GACjE,OAAO,CAAC,OAAO,CAAC,CAgElB"}

package/dist/doctor.js

@@ -10,8 +10,9 @@
  * when a monorepo would hoist it. Relative paths, runtime builtins (node core, `node:`/`bun:`, `bun`),
  * the package's own name, and tsconfig `paths` aliases are excluded — none of them are npm deps.
  */
+import { realpath } from "node:fs/promises";
 import { builtinModules } from "node:module";
-import { dirname, join } from "node:path";
+import { dirname, join, relative } from "node:path";
 import { stripComments, walkSource } from "./check.js";
 // Runtime-provided modules that are never an npm dependency: Node core (bare + `node:` form) and Bun's
 // own `bun` module. `node:`/`bun:`-prefixed specifiers are filtered in packageOf by prefix.
@@ -116,6 +117,122 @@ const depNames = (pkg, field) => {
         : [];
 };
 const isRecord = (value) => typeof value === "object" && value !== null && !Array.isArray(value);
+const MAX_WORKSPACE_IMPORTERS = 2_048;
+const IDENTITY_SENSITIVE_PACKAGES = new Set(["@nifrajs/core", "react", "react-dom"]);
+function workspacePatterns(pkg) {
+    const raw = pkg.workspaces;
+    const entries = Array.isArray(raw)
+        ? raw
+        : isRecord(raw) && Array.isArray(raw.packages)
+            ? raw.packages
+            : [];
+    return entries
+        .filter((entry) => typeof entry === "string" && entry.length > 0)
+        .sort();
+}
+/** Discover package roots declared by npm/Bun's two workspace manifest shapes. Bounded so a hostile
+ * `**` pattern cannot turn a diagnostic into an unbounded filesystem crawl. */
+async function workspaceImporters(cwd, rootPackage) {
+    const manifests = new Set([join(cwd, "package.json")]);
+    for (const pattern of workspacePatterns(rootPackage)) {
+        const packagePattern = `${pattern.replace(/\/$/, "")}/package.json`;
+        for await (const rel of new Bun.Glob(packagePattern).scan({ cwd, dot: false })) {
+            if (rel.split(/[\\/]/).includes("node_modules"))
+                continue;
+            manifests.add(join(cwd, rel));
+            // A pathological workspace pattern should not make doctor unbounded. Duplicate detection is
+            // skipped, while the existing source/declaration diagnostic still runs normally.
+            if (manifests.size > MAX_WORKSPACE_IMPORTERS)
+                return [];
+        }
+    }
+    const out = [];
+    for (const manifest of [...manifests].sort()) {
+        const pkg = await readJson(manifest);
+        if (pkg !== undefined)
+            out.push({ root: dirname(manifest), package: pkg });
+    }
+    return out;
+}
+function duplicateTargets(pkg) {
+    const targets = new Set();
+    for (const field of DEPENDENCY_FIELDS) {
+        for (const name of depNames(pkg, field)) {
+            if (name.startsWith("@nifrajs/") || IDENTITY_SENSITIVE_PACKAGES.has(name))
+                targets.add(name);
+        }
+    }
+    return [...targets].sort();
+}
+async function resolvedInstalledCopy(importer, boundary, name) {
+    const parts = name.split("/");
+    for (let dir = importer;; dir = dirname(dir)) {
+        const packageDir = join(dir, "node_modules", ...parts);
+        const meta = await readJson(join(packageDir, "package.json"));
+        if (meta !== undefined) {
+            try {
+                return {
+                    path: await realpath(packageDir),
+                    version: typeof meta.version === "string" && meta.version.length > 0 ? meta.version : "unknown",
+                };
+            }
+            catch {
+                return undefined;
+            }
+        }
+        if (dir === boundary)
+            return undefined;
+        const parent = dirname(dir);
+        if (parent === dir)
+            return undefined;
+    }
+}
+const displayPath = (cwd, path) => {
+    const rel = relative(cwd, path);
+    return rel === "" ? "." : rel;
+};
+/** Find identity-sensitive dependencies that resolve to multiple physical directories. Two copies at
+ * the same version still fail: module identity (React hooks, Nifra symbols/registries) is path-based. */
+export async function collectDuplicateInstalls(cwd, rootPackage) {
+    const importers = await workspaceImporters(cwd, rootPackage);
+    const byPackage = new Map();
+    for (const importer of importers) {
+        for (const name of duplicateTargets(importer.package)) {
+            if (importer.package.name === name)
+                continue;
+            const copy = await resolvedInstalledCopy(importer.root, cwd, name);
+            if (copy === undefined)
+                continue;
+            let copies = byPackage.get(name);
+            if (copies === undefined) {
+                copies = new Map();
+                byPackage.set(name, copies);
+            }
+            const record = copies.get(copy.path) ?? {
+                version: copy.version,
+                importers: new Set(),
+            };
+            record.importers.add(displayPath(cwd, importer.root));
+            copies.set(copy.path, record);
+        }
+    }
+    const findings = [];
+    for (const [name, copies] of [...byPackage.entries()].sort(([a], [b]) => a.localeCompare(b))) {
+        if (copies.size < 2)
+            continue;
+        findings.push({
+            package: name,
+            copies: [...copies.entries()]
+                .sort(([a], [b]) => a.localeCompare(b))
+                .map(([path, copy]) => ({
+                version: copy.version,
+                path: displayPath(cwd, path),
+                importers: [...copy.importers].sort(),
+            })),
+        });
+    }
+    return findings;
+}
 function depRecord(pkg, field) {
     const deps = pkg[field];
     return isRecord(deps) ? deps : undefined;
@@ -169,7 +286,7 @@ async function inferDependencyFix(cwd, name) {
 export async function collectDoctorResult(cwd) {
     const pkg = await readJson(join(cwd, "package.json"));
     if (pkg === undefined)
-        return { ok: true, ran: false, findings: [] };
+        return { ok: true, ran: false, findings: [], duplicateInstalls: [] };
     const declared = new Set();
     if (typeof pkg.name === "string")
         declared.add(pkg.name); // a package may import its own name (exports map)
@@ -187,7 +304,13 @@ export async function collectDoctorResult(cwd) {
         }
     });
     findings.sort((a, b) => a.file.localeCompare(b.file) || a.line - b.line);
-    return { ok: findings.length === 0, ran: true, findings };
+    const duplicateInstalls = await collectDuplicateInstalls(cwd, pkg);
+    return {
+        ok: findings.length === 0 && duplicateInstalls.length === 0,
+        ran: true,
+        findings,
+        duplicateInstalls,
+    };
 }
 /** Safely add undeclared imports to package.json when the version can be inferred without network I/O. */
 export async function applyDoctorAutoFix(cwd) {
@@ -269,7 +392,7 @@ export async function runDoctor(cwd, opts = {}) {
         console.log("");
     }
     if (result.ok) {
-        console.log("✓ every imported package is declared in package.json");
+        console.log("✓ every imported package is declared and identity-sensitive installs are deduplicated");
         return true;
     }
     // Group by package so the fix ("add X to dependencies") is stated once with its import sites.
@@ -279,13 +402,26 @@ export async function runDoctor(cwd, opts = {}) {
         list.push(f);
         byPkg.set(f.package, list);
     }
-    console.log(`✗ ${byPkg.size} package(s) imported but not declared in package.json:\n`);
-    for (const [pkg, sites] of [...byPkg.entries()].sort()) {
-        console.log(`  ${pkg} — add to dependencies (\`bun add ${pkg}\`)`);
-        for (const s of sites)
-            console.log(`      ${s.file}:${s.line}`);
+    if (byPkg.size > 0) {
+        console.log(`✗ ${byPkg.size} package(s) imported but not declared in package.json:\n`);
+        for (const [pkg, sites] of [...byPkg.entries()].sort()) {
+            console.log(`  ${pkg} - add to dependencies (\`bun add ${pkg}\`)`);
+            for (const s of sites)
+                console.log(`      ${s.file}:${s.line}`);
+        }
+    }
+    if (result.duplicateInstalls.length > 0) {
+        console.log(`${byPkg.size > 0 ? "\n" : ""}✗ identity-sensitive packages resolve to multiple physical copies:\n`);
+        for (const finding of result.duplicateInstalls) {
+            console.log(`  ${finding.package}`);
+            for (const copy of finding.copies) {
+                console.log(`      ${copy.version} at ${copy.path} ← ${copy.importers.join(", ")}`);
+            }
+        }
+        console.log("\n  Align dependency ranges and reinstall from the workspace root; doctor never deletes installs.");
     }
-    console.log("\nThese resolve at Bun runtime via hoisting/workspace but break `tsc` and a standalone install.");
+    if (byPkg.size > 0)
+        console.log("\nThese resolve at Bun runtime via hoisting/workspace but break `tsc` and a standalone install.");
     return false;
 }
 //# sourceMappingURL=doctor.js.map