@niagads/igv 0.2.1 → 0.2.2-alpha.50.sha-4609cab7

package/dist/IGVBrowser.js.map

@@ -1 +1 @@
-{"version":3,"file":"IGVBrowser.js","sources":["../src/IGVBrowser.tsx"],"sourcesContent":[null],"names":["standardizeRange","locus","replace","loadInitialTracks","browser","config","allTracks","_a","tracks","_b","files","loadTracks","resolveTrackIds","IGVBrowser","genome","searchUrl","FEATURE_SEARCH_URL","trackConfig","referenceTracks","VariantReferenceTrack","defaultTracks","urls","indexed","hideNavigation","onBrowserLoad","onTrackRemoved","onLocusChanged","isClient","setIsClient","useState","igv","setIGV","browserIsLoading","setBrowserIsLoading","setBrowser","containerRef","useRef","isDragging","opts","useMemo","genomeReference","_genomes","find","g","id","showAllChromosomes","flanking","DEFAULT_FLANK","minimumBases","showNavigation","search","url","chromosomeField","reference","loadDefaultGenomes","genomeList","alwaysOnTracks","ALWAYS_ON_TRACKS","resolveTrackConfigs","filter","t","removable","map","initialTrackConfiguration","ptConfig","push","seen","Set","track","has","add","uniqueUrls","Array","from","split","pop","indexURL","name","useEffect","useLayoutEffect","current","loadIGV","default","mod","import","registerTracks","VariantServiceTrack","VariantPValueTrack","registerTrackClass","targetDiv","createBrowser","then","on","trackPopover","referenceFrameList","loc","rf","getLocusString","join","__awaiter","clearTrackView","React","createElement","Skeleton","type","ref","className","memo"],"mappings":"gjBAeA,SAASA,EAAiBC,GAGtB,OAAOA,EAAMC,QAAQ,KAAM,IAAIA,QAAQ,MAAO,IAClD,CAQA,SAAeC,EAAkBC,EAAcC,mDAC3C,MAAMC,EAA+B,IAAmB,QAAdC,EAAAF,aAAM,EAANA,EAAQG,cAAM,IAAAD,EAAAA,EAAI,MAAuB,QAAbE,EAAAJ,aAAM,EAANA,EAAQK,aAAK,IAAAD,EAAAA,EAAI,IAEvF,aADME,EAAWP,EAASE,GACnBD,EAAOG,OAASI,EAAgBP,EAAOG,QAAU,EAC5D,EAAC,CAwCD,MAAMK,EAAwC,EAC1CC,SAAS,SACTC,YAAYC,EACZf,QACAgB,cACAC,kBAAkB,CAACC,GACnBC,gBACAV,QAAQ,CAAEW,KAAM,GAAIC,SAAS,GAC7BC,kBAAiB,EACjBC,gBACAC,iBACAC,qBAEA,MAAOC,EAAUC,GAAeC,GAAS,IAClCC,EAAKC,GAAUF,EAAc,OAC7BG,EAAkBC,GAAuBJ,GAAkB,IAC3DzB,EAAS8B,GAAcL,EAAc,MAEtCM,EAAeC,EAAO,MACtBC,EAAaD,GAAO,GAEpBE,EAAYC,EAAQ,KACtB,MAAMC,EAAkBC,EAASC,KAAMC,GAAMA,EAAEC,KAAO9B,GAwBtD,MAvBuB,CACnBb,MAAOD,EAAiBC,GAAS,SACjC4C,oBAAoB,EACpBC,SAAUC,EACVC,aAAc,GACdC,gBAAiB1B,EACjB2B,OAAQ,CACJC,IAAKpC,EACLqC,gBAAiB,OAErBC,UAAWb,EACXc,oBAAoB,EACpBC,WAAY,CAACf,GACbgB,eAAgB,IACTC,KACCvC,EACEwC,EAAoBzC,EAAaC,GAC5ByC,OAAQC,IAAsB,IAAhBA,EAAEC,WAChBC,IAAKF,GAAMA,EAAEhB,IAClB,MAKf,CAAC9B,EAAQb,IAEN8D,EAA4BxB,EAA8B,KAC5D,MAAMyB,EAAiC,CAAA,EAKvC,IAAIxD,EAA4BU,EAAkBwC,EAAoBzC,EAAaC,GAAmB,GAElGE,GACAZ,EAAOyD,QAAQP,EAAoBzC,EAAaG,IAIpD,MAAM8C,EAAO,IAAIC,IAGjB,GAFAH,EAASxD,OAASA,EAAOmD,OAAQS,IAAWF,EAAKG,IAAID,EAAMxB,KAAOsB,EAAKI,IAAIF,EAAMxB,KAE7ElC,EAAO,CACP,MAAM6D,EAAaC,MAAMC,KAAK,IAAIN,IAAIzD,EAAMW,OAC5C2C,EAAStD,MAAQ6D,EAAWT,IAAKX,IAC7B,MAAMP,EAAK,QAAUO,EAAIuB,MAAM,KAAKC,MAAOzE,QAAQ,QAAS,IAC5D,OAAOQ,EAAMY,QACP,CAAE6B,IAAKA,EAAKyB,SAAU,GAAGzB,QAAW0B,KAAM,SAASjC,IAAMA,GAAIA,GAC7D,CAAEO,IAAKA,EAAK0B,KAAM,SAASjC,IAAMA,GAAIA,IAEnD,CAEA,OAAOoB,GACR,IAoGH,OAlGAc,EAAU,KACNlD,GAAY,IACb,IAEHmD,EAAgB,KACZ,GAAIpD,GAAYQ,EAAa6C,QAAS,CAElC,SAAeC,4CACX,MAAQC,QAASC,SAAcC,OAAO,oBACtCrD,EAAOoD,EACX,EAAC,CAED,SAAeE,4CACX,MAAQH,QAASI,SAA8BF,OAAO,oCAC9CF,QAASK,SAA6BH,OAAO,kCACrDtD,EAAI0D,mBAAmB,eAAgBD,GACvCzD,EAAI0D,mBAAmB,MAAOD,GAC9BzD,EAAI0D,mBAAmB,kBAAmBF,EAC9C,EAAC,CAED,GAAKxD,EAEE,CAEH,MAAM2D,EAAYtD,EAAa6C,QAC/BK,IAEY,MAAR/C,GACAR,EAAI4D,cAAcD,EAAWnD,GAAMqD,KAAK,SAAgBvF,2CAEpDA,EAAQwF,GAAG,aAAcC,GAGzBzF,EAAQwF,GAAG,eAAgB,SAAUxB,GAC7B3C,GACAA,EAAe2C,EAAM/D,OAAOuC,GAEpC,GAGAxC,EAAQwF,GAAG,cAAe,SAAUE,GAChC,IAAKzD,EAAW2C,QAAS,CACrB,IAAIe,EAAMD,EAAmBhC,IAAKkC,GAAYA,EAAGC,kBAAkBC,KAAK,OACxExE,GAAkBA,EAAeqE,EACrC,CACJ,GAGA3F,EAAQwF,GAAG,YAAa,KACpBvD,EAAW2C,SAAU,IAGzB5E,EAAQwF,GAAG,eAAgB,KACvBvD,EAAW2C,SAAU,EACrB,IAAIe,EAAM3F,EAAQ0F,mBAAmBhC,IAAKkC,GAAYA,EAAGC,kBAAkBC,KAAK,OAChFxE,GAAkBA,EAAeqE,WAG/B5F,EAAkBC,EAAS2D,GAIjC9B,GAAoB,GACpBC,EAAW9B,GAGPoB,GACAA,EAAcpB,EAEtB,EAAC,EAET,MAlDI6E,GAmDR,GACD,CAACtD,EAAUG,IAGdgD,EAAU,KACF1E,GACAA,EAAQ8C,OAAOjD,IAEpB,CAACA,IAEJ6E,EAAU,MAWD9C,GAAoB5B,GAVmB+F,OAAA,OAAA,OAAA,EAAA,YACxCC,EAAehG,EAASkC,EAAKkB,gBAEzBpC,IACkCsC,EAAoBzC,EAAaG,SAC7DjB,EAAkBC,EAAS2D,GAEzC,IAMD,CAAC3C,EAAeH,EAAae,EAAkB5B,KAE1CuB,GAAYK,EAChBqE,EAAAC,cAACC,EAAQ,CAACC,KAAK,UAEfH,EAAAC,cAAA,MAAA,CAAKG,IAAKtE,EAAcuE,UAAU,SAAS9D,GAAG,oBAKxByD,EAAMM,KAAK9F"}
+{"version":3,"file":"IGVBrowser.js","sources":["../src/IGVBrowser.tsx"],"sourcesContent":[null],"names":["standardizeRange","locus","replace","loadInitialTracks","browser","config","allTracks","_a","tracks","_b","files","loadTracks","resolveTrackIds","IGVBrowser","genome","searchUrl","FEATURE_SEARCH_URL","trackConfig","referenceTracks","VariantReferenceTrack","defaultTracks","urls","indexed","hideNavigation","onBrowserLoad","onTrackRemoved","onLocusChanged","isClient","setIsClient","useState","igv","setIGV","browserIsLoading","setBrowserIsLoading","setBrowser","containerRef","useRef","isDragging","opts","useMemo","genomeReference","_genomes","find","g","id","showAllChromosomes","flanking","DEFAULT_FLANK","minimumBases","showNavigation","search","url","chromosomeField","reference","loadDefaultGenomes","genomeList","alwaysOnTracks","ALWAYS_ON_TRACKS","resolveTrackConfigs","filter","t","removable","map","initialTrackConfiguration","ptConfig","push","seen","Set","track","has","add","uniqueUrls","Array","from","split","pop","indexURL","name","useEffect","useLayoutEffect","current","loadIGV","default","mod","registerTracks","VariantServiceTrack","VariantPValueTrack","registerTrackClass","targetDiv","createBrowser","then","on","trackPopover","referenceFrameList","loc","rf","getLocusString","join","__awaiter","clearTrackView","React","createElement","Skeleton","type","ref","className","memo"],"mappings":"gjBAeA,SAASA,EAAiBC,GAGtB,OAAOA,EAAMC,QAAQ,KAAM,IAAIA,QAAQ,MAAO,IAClD,CAQA,SAAeC,EAAkBC,EAAcC,mDAC3C,MAAMC,EAA+B,IAAmB,QAAdC,EAAAF,aAAM,EAANA,EAAQG,cAAM,IAAAD,EAAAA,EAAI,MAAuB,QAAbE,EAAAJ,aAAM,EAANA,EAAQK,aAAK,IAAAD,EAAAA,EAAI,IAEvF,aADME,EAAWP,EAASE,GACnBD,EAAOG,OAASI,EAAgBP,EAAOG,QAAU,EAC5D,EAAC,CAwCD,MAAMK,EAAwC,EAC1CC,SAAS,SACTC,YAAYC,EACZf,QACAgB,cACAC,kBAAkB,CAACC,GACnBC,gBACAV,QAAQ,CAAEW,KAAM,GAAIC,SAAS,GAC7BC,kBAAiB,EACjBC,gBACAC,iBACAC,qBAEA,MAAOC,EAAUC,GAAeC,GAAS,IAClCC,EAAKC,GAAUF,EAAc,OAC7BG,EAAkBC,GAAuBJ,GAAkB,IAC3DzB,EAAS8B,GAAcL,EAAc,MAEtCM,EAAeC,EAAO,MACtBC,EAAaD,GAAO,GAEpBE,EAAYC,EAAQ,KACtB,MAAMC,EAAkBC,EAASC,KAAMC,GAAMA,EAAEC,KAAO9B,GAwBtD,MAvBuB,CACnBb,MAAOD,EAAiBC,GAAS,SACjC4C,oBAAoB,EACpBC,SAAUC,EACVC,aAAc,GACdC,gBAAiB1B,EACjB2B,OAAQ,CACJC,IAAKpC,EACLqC,gBAAiB,OAErBC,UAAWb,EACXc,oBAAoB,EACpBC,WAAY,CAACf,GACbgB,eAAgB,IACTC,KACCvC,EACEwC,EAAoBzC,EAAaC,GAC5ByC,OAAQC,IAAsB,IAAhBA,EAAEC,WAChBC,IAAKF,GAAMA,EAAEhB,IAClB,MAKf,CAAC9B,EAAQb,IAEN8D,EAA4BxB,EAA8B,KAC5D,MAAMyB,EAAiC,CAAA,EAKvC,IAAIxD,EAA4BU,EAAkBwC,EAAoBzC,EAAaC,GAAmB,GAElGE,GACAZ,EAAOyD,QAAQP,EAAoBzC,EAAaG,IAIpD,MAAM8C,EAAO,IAAIC,IAGjB,GAFAH,EAASxD,OAASA,EAAOmD,OAAQS,IAAWF,EAAKG,IAAID,EAAMxB,KAAOsB,EAAKI,IAAIF,EAAMxB,KAE7ElC,EAAO,CACP,MAAM6D,EAAaC,MAAMC,KAAK,IAAIN,IAAIzD,EAAMW,OAC5C2C,EAAStD,MAAQ6D,EAAWT,IAAKX,IAC7B,MAAMP,EAAK,QAAUO,EAAIuB,MAAM,KAAKC,MAAOzE,QAAQ,QAAS,IAC5D,OAAOQ,EAAMY,QACP,CAAE6B,IAAKA,EAAKyB,SAAU,GAAGzB,QAAW0B,KAAM,SAASjC,IAAMA,GAAIA,GAC7D,CAAEO,IAAKA,EAAK0B,KAAM,SAASjC,IAAMA,GAAIA,IAEnD,CAEA,OAAOoB,GACR,IAoGH,OAlGAc,EAAU,KACNlD,GAAY,IACb,IAEHmD,EAAgB,KACZ,GAAIpD,GAAYQ,EAAa6C,QAAS,CAElC,SAAeC,4CACX,MAAQC,QAASC,gBAAqB,oBACtCpD,EAAOoD,EACX,EAAC,CAED,SAAeC,4CACX,MAAQF,QAASG,gBAAqC,oCAC9CH,QAASI,gBAAoC,kCACrDxD,EAAIyD,mBAAmB,eAAgBD,GACvCxD,EAAIyD,mBAAmB,MAAOD,GAC9BxD,EAAIyD,mBAAmB,kBAAmBF,EAC9C,EAAC,CAED,GAAKvD,EAEE,CAEH,MAAM0D,EAAYrD,EAAa6C,QAC/BI,IAEY,MAAR9C,GACAR,EAAI2D,cAAcD,EAAWlD,GAAMoD,KAAK,SAAgBtF,2CAEpDA,EAAQuF,GAAG,aAAcC,GAGzBxF,EAAQuF,GAAG,eAAgB,SAAUvB,GAC7B3C,GACAA,EAAe2C,EAAM/D,OAAOuC,GAEpC,GAGAxC,EAAQuF,GAAG,cAAe,SAAUE,GAChC,IAAKxD,EAAW2C,QAAS,CACrB,IAAIc,EAAMD,EAAmB/B,IAAKiC,GAAYA,EAAGC,kBAAkBC,KAAK,OACxEvE,GAAkBA,EAAeoE,EACrC,CACJ,GAGA1F,EAAQuF,GAAG,YAAa,KACpBtD,EAAW2C,SAAU,IAGzB5E,EAAQuF,GAAG,eAAgB,KACvBtD,EAAW2C,SAAU,EACrB,IAAIc,EAAM1F,EAAQyF,mBAAmB/B,IAAKiC,GAAYA,EAAGC,kBAAkBC,KAAK,OAChFvE,GAAkBA,EAAeoE,WAG/B3F,EAAkBC,EAAS2D,GAIjC9B,GAAoB,GACpBC,EAAW9B,GAGPoB,GACAA,EAAcpB,EAEtB,EAAC,EAET,MAlDI6E,GAmDR,GACD,CAACtD,EAAUG,IAGdgD,EAAU,KACF1E,GACAA,EAAQ8C,OAAOjD,IAEpB,CAACA,IAEJ6E,EAAU,MAWD9C,GAAoB5B,GAVmB8F,OAAA,OAAA,OAAA,EAAA,YACxCC,EAAe/F,EAASkC,EAAKkB,gBAEzBpC,IACkCsC,EAAoBzC,EAAaG,SAC7DjB,EAAkBC,EAAS2D,GAEzC,IAMD,CAAC3C,EAAeH,EAAae,EAAkB5B,KAE1CuB,GAAYK,EAChBoE,EAAAC,cAACC,EAAQ,CAACC,KAAK,UAEfH,EAAAC,cAAA,MAAA,CAAKG,IAAKrE,EAAcsE,UAAU,SAAS7D,GAAG,oBAKxBwD,EAAMM,KAAK7F"}

package/dist/IGVBrowserWithSelector.js

@@ -1,2 +1,2 @@
-import{__rest as e}from"tslib";import t from"./IGVBrowser.js";import r,{useState as o,useEffect as a,useMemo as n}from"react";import c from"@niagads/table";import{resolveTrackIds as i,findTrackConfigs as s}from"./utils/track_config.js";import{Skeleton as l}from"@niagads/ui";import{handleUpdateBrowserTracks as m}from"./utils/browser.js";import d from"./styles/TrackSelectorSection.module.css.js";function p(p){var{selectorTable:u,trackConfig:f,defaultTracks:g}=p,S=e(p,["selectorTable","trackConfig","defaultTracks"]);const[k,b]=o(g?i(g):[]),[w,j]=o(null);a(()=>{b(g?i(g):[])},[f]);const T=n(()=>{if(u)return u;const e=f.map(({id:e,name:t,description:r,metadata:o})=>Object.assign({id:e,name:t,description:r},o||{})),t=Array.from(e.reduce((e,t)=>(Object.keys(t).forEach(t=>e.add(t)),e),new Set)),r=["id","name","description"],o=t.filter(e=>!r.includes(String(e))).map(String).sort(),a=[...r.filter(e=>t.includes(e)),...o].map(e=>({id:e,header:e.replace(/_/g," ").replace(/\w\S*/g,e=>e.charAt(0).toUpperCase()+e.slice(1).toLowerCase())})),n=e.map(e=>{const r={};for(const o of t){const t=String(o);r[t]=t in e?e[t]:null}return r}),c=a.length>8?a.slice(0,8).map(e=>e.id):void 0;return{id:"track-selector",columns:a,data:n,options:c?{defaultColumns:c}:{}}},[u,f]);a(()=>{if(w){const e=s(f,k);m(w,e)}},[k,w]);const{onBrowserLoad:C,onTrackRemoved:E}=S,h=e(S,["onBrowserLoad","onTrackRemoved"]);return r.createElement(r.Fragment,null,r.createElement(t,Object.assign({trackConfig:f,onBrowserLoad:j,onTrackRemoved:e=>{b(t=>t.filter(t=>t!==e))}},h)),r.createElement("div",{className:d.trackSelectorSection},r.createElement("div",{className:d.trackSelectorSectionTitle},"Select Tracks"),w?r.createElement(c,{id:T.id,columns:T.columns,data:T.data,rowSelection:k,onRowSelectionChange:e=>{b(Object.keys(e))},options:Object.assign(Object.assign({},T.options||{}),{enableRowSelect:!0,rowSelectColumn:{header:"",description:"Select tracks to display in the Genome Browser",enableMultiSelect:!0,rowUniqueKey:"id"},disableExport:!0,disableColumnFilters:!0})}):r.createElement(l,{type:"table"})))}export{p as default};
+import{__rest as e}from"tslib";import t from"./IGVBrowser.js";import r,{useState as o,useEffect as a,useMemo as n}from"react";import c from"@niagads/table";import{resolveTrackIds as i,findTrackConfigs as s}from"./utils/track_config.js";import{Skeleton as l}from"@niagads/ui";import{handleUpdateBrowserTracks as m}from"./utils/browser.js";import d from"./styles/TrackSelectorSection.module.css.js";function p(p){var{selectorTable:f,trackConfig:u,defaultTracks:g}=p,S=e(p,["selectorTable","trackConfig","defaultTracks"]);const[k,b]=o(g?i(g):[]),[w,j]=o(null);a(()=>{b(g?i(g):[])},[u]);const T=n(()=>{if(f)return f;const e=u.map(({id:e,name:t,description:r,metadata:o})=>Object.assign({id:e,name:t,description:r},o||{})),t=Array.from(e.reduce((e,t)=>(Object.keys(t).forEach(t=>e.add(t)),e),new Set)),r=["id","name","description"],o=t.filter(e=>!r.includes(String(e))).map(String).sort(),a=[...r.filter(e=>t.includes(e)),...o].map(e=>({id:e,header:e.replace(/_/g," ").replace(/\w\S*/g,e=>e.charAt(0).toUpperCase()+e.slice(1).toLowerCase())})),n=e.map(e=>{const r={};for(const o of t){const t=String(o);r[t]=t in e?e[t]:null}return r}),c=a.length>8?a.slice(0,8).map(e=>e.id):void 0;return{id:"track-selector",columns:a,data:n,options:c?{defaultColumns:c}:{}}},[f,u]);a(()=>{if(w){const e=s(u,k);m(w,e)}},[k,w]);const{onBrowserLoad:C,onTrackRemoved:E}=S,h=e(S,["onBrowserLoad","onTrackRemoved"]);return r.createElement(r.Fragment,null,r.createElement(t,Object.assign({trackConfig:u,onBrowserLoad:j,onTrackRemoved:e=>{b(t=>t.filter(t=>t!==e))}},h)),r.createElement("div",{className:d.trackSelectorSection},r.createElement("div",{className:d.trackSelectorSectionTitle},"Select Tracks"),w?r.createElement(c,{id:T.id,columns:T.columns,data:T.data,rowSelection:k,onRowSelectionChange:e=>{b(Object.keys(e))},options:Object.assign(Object.assign({},T.options||{}),{enableRowSelect:!0,rowSelectOpts:{header:"",description:"Select tracks to display in the Genome Browser",enableMultiSelect:!0,rowUniqueKey:"id"},enableExport:!1,enableColumnFilters:!1})}):r.createElement(l,{type:"table"})))}export{p as default};
 //# sourceMappingURL=IGVBrowserWithSelector.js.map

package/dist/IGVBrowserWithSelector.js.map

@@ -1 +1 @@
-{"version":3,"file":"IGVBrowserWithSelector.js","sources":["../src/IGVBrowserWithSelector.tsx"],"sourcesContent":[null],"names":["IGVBrowserWithSelector","_a","selectorTable","trackConfig","defaultTracks","restBrowserProps","__rest","selectedTracks","setSelectedTracks","useState","resolveTrackIds","browser","setBrowser","useEffect","trackSelectorTable","useMemo","data","map","id","name","description","metadata","uniqueFieldNames","Array","from","reduce","set","obj","Object","keys","forEach","k","add","Set","priority","rest","filter","includes","String","sort","columns","header","replace","txt","charAt","toUpperCase","slice","toLowerCase","normalizedData","row","filled","field","key","defaultColumns","length","col","undefined","options","selectedTrackConfigs","findTrackConfigs","handleUpdateBrowserTracks","onBrowserLoad","onTrackRemoved","filteredBrowserProps","React","createElement","Fragment","IGVBrowser","assign","trackId","tracks","className","styles","trackSelectorSection","trackSelectorSectionTitle","Table","rowSelection","onRowSelectionChange","state","enableRowSelect","rowSelectColumn","enableMultiSelect","rowUniqueKey","disableExport","disableColumnFilters","Skeleton","type"],"mappings":"6YAiBc,SAAUA,EAAuBC,OAAAC,cAC3CA,EAAaC,YACbA,EAAWC,cACXA,KACGC,EAAgBC,EAAAL,EAJwB,CAAA,gBAAA,cAAA,kBAM3C,MAAOM,EAAgBC,GAAqBC,EAAmBL,EAAgBM,EAAgBN,GAAiB,KACzGO,EAASC,GAAcH,EAAc,MAM5CI,EAAU,KAENL,EAAkBJ,EAAgBM,EAAgBN,GAAiB,KACpE,CAACD,IAIJ,MAAMW,EAAqBC,EAAQ,KAC/B,GAAIb,EAAe,OAAOA,EAG1B,MAAMc,EAAOb,EAAYc,IAAI,EAAGC,KAAIC,OAAMC,cAAaC,6BACnDH,KACAC,OACAC,eACIC,GAAsB,CAAA,IAKxBC,EAAmBC,MAAMC,KAC3BR,EAAKS,OAAO,CAACC,EAAKC,KACdC,OAAOC,KAAKF,GAAKG,QAASC,GAAML,EAAIM,IAAID,IACjCL,GACR,IAAIO,MAILC,EAAW,CAAC,KAAM,OAAQ,eAC1BC,EAAOb,EACRc,OAAQL,IAAOG,EAASG,SAASC,OAAOP,KACxCd,IAAIqB,QACJC,OAICC,EAHgB,IAAIN,EAASE,OAAQL,GAAMT,EAAiBe,SAASN,OAAQI,GAGrDlB,IAAKC,IAAE,CACjCA,KACAuB,OAAQvB,EACHwB,QAAQ,KAAM,KACdA,QAAQ,SAAWC,GAAgBA,EAAIC,OAAO,GAAGC,cAAgBF,EAAIG,MAAM,GAAGC,kBAIjFC,EAAiBhC,EAAKC,IAAKgC,IAC7B,MAAMC,EAA8B,CAAA,EACpC,IAAK,MAAMC,KAAS7B,EAAkB,CAClC,MAAM8B,EAAMd,OAAOa,GACnBD,EAAOE,GAAOA,KAAOH,EAAMA,EAAIG,GAAO,IAC1C,CACA,OAAOF,IAILG,EAAiBb,EAAQc,OAAS,EAAId,EAAQM,MAAM,EAAG,GAAG7B,IAAKsC,GAAQA,EAAIrC,SAAMsC,EAEvF,MAAO,CACHtC,GAAI,iBACJsB,QAASA,EACTxB,KAAMgC,EACNS,QAASJ,EAAiB,CAAEA,eAAgBA,GAAmB,CAAA,IAEpE,CAACnD,EAAeC,IAEnBU,EAAU,KACN,GAAIF,EAAS,CACT,MAAM+C,EAAuBC,EAAiBxD,EAAcI,GAC5DqD,EAA0BjD,EAAS+C,EACvC,GACD,CAACnD,EAAgBI,IAEpB,MAIMkD,cAAEA,EAAaC,eAAEA,GAA4CzD,EAAzB0D,EAAoBzD,EAAKD,EAA7D,CAAA,gBAAA,mBACN,OACI2D,EAAAC,cAAAD,EAAAE,SAAA,KACIF,EAAAC,cAACE,EAAUvC,OAAAwC,OAAA,CACPjE,YAAaA,EACb0D,cAAejD,EACfkD,eArF2BO,IACnC7D,EAAmB8D,GAAWA,EAAOlC,OAAQlB,GAAOA,IAAOmD,MAqF/CN,IAGRC,EAAAC,cAAA,MAAA,CAAKM,UAAWC,EAAOC,sBACnBT,EAAAC,cAAA,MAAA,CAAKM,UAAWC,EAAOE,2BAAyB,iBAE9C/D,EAGEqD,EAAAC,cAACU,EAAK,CACFzD,GAAIJ,EAAmBI,GACvBsB,QAAS1B,EAAmB0B,QAC5BxB,KAAMF,EAAmBE,KACzB4D,aAAcrE,EACdsE,qBAzBgBC,IAChCtE,EAAkBoB,OAAOC,KAAKiD,KAyBdrB,QAAO7B,OAAAwC,OAAAxC,OAAAwC,OAAA,CAAA,EACCtD,EAAmB2C,SAAW,CAAA,GAAG,CACrCsB,iBAAiB,EACjBC,gBAAiB,CACbvC,OAAQ,GACRrB,YAAa,iDACb6D,mBAAmB,EACnBC,aAAc,MAElBC,eAAe,EACfC,sBAAsB,MAlB9BpB,EAAAC,cAACoB,EAAQ,CAACC,KAAK,WAyBnC"}
+{"version":3,"file":"IGVBrowserWithSelector.js","sources":["../src/IGVBrowserWithSelector.tsx"],"sourcesContent":[null],"names":["IGVBrowserWithSelector","_a","selectorTable","trackConfig","defaultTracks","restBrowserProps","__rest","selectedTracks","setSelectedTracks","useState","resolveTrackIds","browser","setBrowser","useEffect","trackSelectorTable","useMemo","data","map","id","name","description","metadata","uniqueFieldNames","Array","from","reduce","set","obj","Object","keys","forEach","k","add","Set","priority","rest","filter","includes","String","sort","columns","header","replace","txt","charAt","toUpperCase","slice","toLowerCase","normalizedData","row","filled","field","key","defaultColumns","length","col","undefined","options","selectedTrackConfigs","findTrackConfigs","handleUpdateBrowserTracks","onBrowserLoad","onTrackRemoved","filteredBrowserProps","React","createElement","Fragment","IGVBrowser","assign","trackId","tracks","className","styles","trackSelectorSection","trackSelectorSectionTitle","Table","rowSelection","onRowSelectionChange","state","enableRowSelect","rowSelectOpts","enableMultiSelect","rowUniqueKey","enableExport","enableColumnFilters","Skeleton","type"],"mappings":"6YAiBc,SAAUA,EAAuBC,OAAAC,cAC3CA,EAAaC,YACbA,EAAWC,cACXA,KACGC,EAAgBC,EAAAL,EAJwB,CAAA,gBAAA,cAAA,kBAM3C,MAAOM,EAAgBC,GAAqBC,EAAmBL,EAAgBM,EAAgBN,GAAiB,KACzGO,EAASC,GAAcH,EAAc,MAM5CI,EAAU,KAENL,EAAkBJ,EAAgBM,EAAgBN,GAAiB,KACpE,CAACD,IAIJ,MAAMW,EAAqBC,EAAQ,KAC/B,GAAIb,EAAe,OAAOA,EAG1B,MAAMc,EAAOb,EAAYc,IAAI,EAAGC,KAAIC,OAAMC,cAAaC,6BACnDH,KACAC,OACAC,eACIC,GAAsB,CAAA,IAKxBC,EAAmBC,MAAMC,KAC3BR,EAAKS,OAAO,CAACC,EAAKC,KACdC,OAAOC,KAAKF,GAAKG,QAASC,GAAML,EAAIM,IAAID,IACjCL,GACR,IAAIO,MAILC,EAAW,CAAC,KAAM,OAAQ,eAC1BC,EAAOb,EACRc,OAAQL,IAAOG,EAASG,SAASC,OAAOP,KACxCd,IAAIqB,QACJC,OAICC,EAHgB,IAAIN,EAASE,OAAQL,GAAMT,EAAiBe,SAASN,OAAQI,GAGrDlB,IAAKC,IAAE,CACjCA,KACAuB,OAAQvB,EACHwB,QAAQ,KAAM,KACdA,QAAQ,SAAWC,GAAgBA,EAAIC,OAAO,GAAGC,cAAgBF,EAAIG,MAAM,GAAGC,kBAIjFC,EAAiBhC,EAAKC,IAAKgC,IAC7B,MAAMC,EAA8B,CAAA,EACpC,IAAK,MAAMC,KAAS7B,EAAkB,CAClC,MAAM8B,EAAMd,OAAOa,GACnBD,EAAOE,GAAOA,KAAOH,EAAMA,EAAIG,GAAO,IAC1C,CACA,OAAOF,IAILG,EAAiBb,EAAQc,OAAS,EAAId,EAAQM,MAAM,EAAG,GAAG7B,IAAKsC,GAAQA,EAAIrC,SAAMsC,EAEvF,MAAO,CACHtC,GAAI,iBACJsB,QAASA,EACTxB,KAAMgC,EACNS,QAASJ,EAAiB,CAAEA,eAAgBA,GAAmB,CAAA,IAEpE,CAACnD,EAAeC,IAEnBU,EAAU,KACN,GAAIF,EAAS,CACT,MAAM+C,EAAuBC,EAAiBxD,EAAcI,GAC5DqD,EAA0BjD,EAAS+C,EACvC,GACD,CAACnD,EAAgBI,IAEpB,MAIMkD,cAAEA,EAAaC,eAAEA,GAA4CzD,EAAzB0D,EAAoBzD,EAAKD,EAA7D,CAAA,gBAAA,mBACN,OACI2D,EAAAC,cAAAD,EAAAE,SAAA,KACIF,EAAAC,cAACE,EAAUvC,OAAAwC,OAAA,CACPjE,YAAaA,EACb0D,cAAejD,EACfkD,eArF2BO,IACnC7D,EAAmB8D,GAAWA,EAAOlC,OAAQlB,GAAOA,IAAOmD,MAqF/CN,IAGRC,EAAAC,cAAA,MAAA,CAAKM,UAAWC,EAAOC,sBACnBT,EAAAC,cAAA,MAAA,CAAKM,UAAWC,EAAOE,2BAAyB,iBAE9C/D,EAGEqD,EAAAC,cAACU,EAAK,CACFzD,GAAIJ,EAAmBI,GACvBsB,QAAS1B,EAAmB0B,QAC5BxB,KAAMF,EAAmBE,KACzB4D,aAAcrE,EACdsE,qBAzBgBC,IAChCtE,EAAkBoB,OAAOC,KAAKiD,KAyBdrB,QAAO7B,OAAAwC,OAAAxC,OAAAwC,OAAA,CAAA,EACCtD,EAAmB2C,SAAW,CAAA,GAAG,CACrCsB,iBAAiB,EACjBC,cAAe,CACXvC,OAAQ,GACRrB,YAAa,iDACb6D,mBAAmB,EACnBC,aAAc,MAElBC,cAAc,EACdC,qBAAqB,MAlB7BpB,EAAAC,cAACoB,EAAQ,CAACC,KAAK,WAyBnC"}

package/dist/index.d.ts

@@ -1,6 +1,6 @@
 import React from 'react';
-import { TableProps } from '@niagads/table';
-export { TableProps as SelectorTableProps } from '@niagads/table';
+import { TableConfig } from '@niagads/table';
+export { TableConfig as SelectorTableProps } from '@niagads/table';
 
 interface IGVBrowserTrack {
     id: string;
@@ -51,7 +51,7 @@ interface IGVBrowserProps {
 declare const IGVBrowser: React.FC<IGVBrowserProps>;
 
 interface IGVBrowserWithSelectorProps extends IGVBrowserProps {
-    selectorTable?: TableProps;
+    selectorTable?: TableConfig;
     trackConfig: IGVBrowserTrack[];
 }
 declare function IGVBrowserWithSelector({ selectorTable, trackConfig, defaultTracks, ...restBrowserProps }: IGVBrowserWithSelectorProps): React.JSX.Element;

package/dist/utils/browser.js.map

@@ -1 +1 @@
-{"version":3,"file":"browser.js","sources":["../../src/utils/browser.tsx"],"sourcesContent":[null],"names":["getLoadedTracks","browser","alwaysOnTracks","ALWAYS_ON_TRACKS","_a","trackViews","map","view","getViewTrackIdentifier","filter","track","includes","removeTrackById","trackId","trackView","removeTrack","clearTrackView","forEach","id","loadTrack","__awaiter","format","match","default","decodeBedXY","import","decode","visibilityWindow","QTL_VISIBILITY_WINDOW","supportsWholeGenome","url","ShardedBedReader","reader","genome","_b","type","resolveServiceTrackReader","endpoint","infoURL","GENOMICSDB_ROOT","loadTracks","tracks","_f","_d","_e","__asyncValues","t","next","done","value","handleAddTracksToBrowser","selectedTrackConfigs","loadedTrackIds","tracksToAdd","length","handleRemoveTracksFromBrowser","tracksToRemove","some","handleUpdateBrowserTracks","config"],"mappings":"kRAYO,MAAMA,EAAkB,CAACC,EAAcC,EAA2BC,WACrE,OAAoB,QAAnBC,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IACnBE,IAAKC,GAAcC,EAAuBD,IAC1CE,OAAQC,IAAmBR,EAAeS,SAASD,KAiB/CE,EAAkB,CAACX,EAAcY,WAC1C,MACMC,GADgC,QAAnBV,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IACbK,OAAQF,GAAcC,EAAuBD,KAAUM,GACpFZ,EAAQc,YAAYD,EAAU,GAAGJ,QASxBM,EAAiB,CAACf,EAAcC,EAA2BC,YAC9B,QAAnBC,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IAC/Ba,QAASV,IAChB,MAAMW,EAAKV,EAAuBD,GAC7BL,EAAeS,SAASO,IACzBjB,EAAQc,YAAYR,EAAKG,UAWxBS,EAAY,CAAOlB,EAAcS,IAA0BU,cAAA,OAAA,EAAA,oBACpE,GAAI,WAAYV,GAEuC,OAAnC,QAAZN,EAAAM,EAAMW,cAAM,IAAAjB,OAAA,EAAAA,EAAEkB,MAAM,yBAAiC,CACrD,MAAQC,QAASC,SAAsBC,OAAO,6BAC9Cf,EAAMgB,OAASF,EACfd,EAAMiB,iBAAmBC,EACzBlB,EAAMmB,qBAAsB,CAChC,CAEJ,GAAInB,EAAMoB,IAAInB,SAAS,QAAS,CAC5B,MAAQY,QAASQ,SAA2BN,OAAO,kCACnDf,EAAMsB,OAAS,IAAID,EAAiBrB,EAAOT,EAAQgC,OACvD,EACc,QAAVC,EAAAxB,EAAMyB,YAAI,IAAAD,SAAAA,EAAEvB,SAAS,eACrBD,EAAMsB,aAAeI,EACjB,CACIC,SAAU3B,EAAMoB,IAChBpB,MAAOA,EAAMQ,IAEjBR,EAAMyB,OAGVzB,EAAM4B,SAA6B,YAAlB5B,EAAM4B,UACvB5B,EAAM4B,QAAU,GAAGC,kBAGjBtC,EAAQkB,UAAUT,EAC5B,GAOa8B,EAAa,CAAOvC,EAAcwC,IAA6BrB,cAAA,OAAA,EAAA,0BACxE,IAAsB,IAAwCsB,EAAxCC,GAAA,EAAAC,EAAAC,EAAAJ,EAAOnC,IAAKwC,GAAM3B,EAAUlB,EAAS6C,OAAG1C,GAAAsC,QAAAE,EAAAG,QAAAC,MAAAL,GAAA,EAAA,CAAxCD,EAAAO,MAAAN,GAAA,CAA0C,sGACpE,YAUsBO,EAClBjD,EACAkD,EACAC,2CAEA,MAAMC,EAAcF,EAAqB1C,OAAQC,IAA4B0C,EAAezC,SAASD,EAAMQ,KAC3G,OAAImC,EAAYC,OAAS,SACfd,EAAWvC,EAASoD,GACnBA,EAAY/C,IAAKI,GAAUA,EAAMQ,KAErC,EACX,EAAC,UAUqBqC,EAClBtD,EACAkD,EACAC,2CAEA,MAAMI,EAAiBJ,EAAe3C,OACjCS,IAAgBiC,EAAqBM,KAAM/C,GAAUA,EAAMQ,KAAOA,IAGvE,IAAK,MAAML,KAAW2C,EAClB5C,EAAgBX,EAASY,GAG7B,OAAO2C,CACX,EAAC,CAmBK,SAAgBE,EAA0BzD,EAAckD,2CAC1D,MAAMC,EAAiBpD,EAAgBC,EAASA,EAAQ0D,OAAOzD,sBACzDgD,EAAyBjD,EAASkD,EAAsBC,SACxDG,EAA8BtD,EAASkD,EAAsBC,EACvE,EAAC"}
+{"version":3,"file":"browser.js","sources":["../../src/utils/browser.tsx"],"sourcesContent":[null],"names":["getLoadedTracks","browser","alwaysOnTracks","ALWAYS_ON_TRACKS","_a","trackViews","map","view","getViewTrackIdentifier","filter","track","includes","removeTrackById","trackId","trackView","removeTrack","clearTrackView","forEach","id","loadTrack","__awaiter","format","match","default","decodeBedXY","decode","visibilityWindow","QTL_VISIBILITY_WINDOW","supportsWholeGenome","url","ShardedBedReader","reader","genome","_b","type","resolveServiceTrackReader","endpoint","infoURL","GENOMICSDB_ROOT","loadTracks","tracks","_f","_d","_e","__asyncValues","t","next","done","value","handleAddTracksToBrowser","selectedTrackConfigs","loadedTrackIds","tracksToAdd","length","handleRemoveTracksFromBrowser","tracksToRemove","some","handleUpdateBrowserTracks","config"],"mappings":"kRAYO,MAAMA,EAAkB,CAACC,EAAcC,EAA2BC,WACrE,OAAoB,QAAnBC,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IACnBE,IAAKC,GAAcC,EAAuBD,IAC1CE,OAAQC,IAAmBR,EAAeS,SAASD,KAiB/CE,EAAkB,CAACX,EAAcY,WAC1C,MACMC,GADgC,QAAnBV,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IACbK,OAAQF,GAAcC,EAAuBD,KAAUM,GACpFZ,EAAQc,YAAYD,EAAU,GAAGJ,QASxBM,EAAiB,CAACf,EAAcC,EAA2BC,YAC9B,QAAnBC,EAAAH,aAAO,EAAPA,EAASI,kBAAU,IAAAD,EAAAA,EAAI,IAC/Ba,QAASV,IAChB,MAAMW,EAAKV,EAAuBD,GAC7BL,EAAeS,SAASO,IACzBjB,EAAQc,YAAYR,EAAKG,UAWxBS,EAAY,CAAOlB,EAAcS,IAA0BU,cAAA,OAAA,EAAA,oBACpE,GAAI,WAAYV,GAEuC,OAAnC,QAAZN,EAAAM,EAAMW,cAAM,IAAAjB,OAAA,EAAAA,EAAEkB,MAAM,yBAAiC,CACrD,MAAQC,QAASC,gBAA6B,6BAC9Cd,EAAMe,OAASD,EACfd,EAAMgB,iBAAmBC,EACzBjB,EAAMkB,qBAAsB,CAChC,CAEJ,GAAIlB,EAAMmB,IAAIlB,SAAS,QAAS,CAC5B,MAAQY,QAASO,gBAAkC,kCACnDpB,EAAMqB,OAAS,IAAID,EAAiBpB,EAAOT,EAAQ+B,OACvD,EACc,QAAVC,EAAAvB,EAAMwB,YAAI,IAAAD,SAAAA,EAAEtB,SAAS,eACrBD,EAAMqB,aAAeI,EACjB,CACIC,SAAU1B,EAAMmB,IAChBnB,MAAOA,EAAMQ,IAEjBR,EAAMwB,OAGVxB,EAAM2B,SAA6B,YAAlB3B,EAAM2B,UACvB3B,EAAM2B,QAAU,GAAGC,kBAGjBrC,EAAQkB,UAAUT,EAC5B,GAOa6B,EAAa,CAAOtC,EAAcuC,IAA6BpB,cAAA,OAAA,EAAA,0BACxE,IAAsB,IAAwCqB,EAAxCC,GAAA,EAAAC,EAAAC,EAAAJ,EAAOlC,IAAKuC,GAAM1B,EAAUlB,EAAS4C,OAAGzC,GAAAqC,QAAAE,EAAAG,QAAAC,MAAAL,GAAA,EAAA,CAAxCD,EAAAO,MAAAN,GAAA,CAA0C,sGACpE,YAUsBO,EAClBhD,EACAiD,EACAC,2CAEA,MAAMC,EAAcF,EAAqBzC,OAAQC,IAA4ByC,EAAexC,SAASD,EAAMQ,KAC3G,OAAIkC,EAAYC,OAAS,SACfd,EAAWtC,EAASmD,GACnBA,EAAY9C,IAAKI,GAAUA,EAAMQ,KAErC,EACX,EAAC,UAUqBoC,EAClBrD,EACAiD,EACAC,2CAEA,MAAMI,EAAiBJ,EAAe1C,OACjCS,IAAgBgC,EAAqBM,KAAM9C,GAAUA,EAAMQ,KAAOA,IAGvE,IAAK,MAAML,KAAW0C,EAClB3C,EAAgBX,EAASY,GAG7B,OAAO0C,CACX,EAAC,CAmBK,SAAgBE,EAA0BxD,EAAciD,2CAC1D,MAAMC,EAAiBnD,EAAgBC,EAASA,EAAQyD,OAAOxD,sBACzD+C,EAAyBhD,EAASiD,EAAsBC,SACxDG,EAA8BrD,EAASiD,EAAsBC,EACvE,EAAC"}

package/dist/utils/track_config.js.map

@@ -1 +1 @@
-{"version":3,"file":"track_config.js","sources":["../../src/utils/track_config.tsx"],"sourcesContent":[null],"names":["findTrackConfigs","config","trackIds","filter","c","includes","id","resolveServiceTrackReader","trackType","__awaiter","default","GWASServiceReader","import","VariantServiceReader","resolveTrackConfigs","tracks","Error","resolveTrackIds","map","t"],"mappings":"kCAQO,MAAMA,EAAmB,CAACC,EAA2BC,IACxDD,EAAOE,OAAQC,GAAMF,EAASG,SAASD,EAAEE,KAShCC,EAA4B,CAAON,EAAaO,IAAqBC,cAAA,OAAA,EAAA,YAG9E,OAAQD,GACJ,IAAK,eACD,MAAQE,QAASC,SAA4BC,OAAO,mCACpD,OAAO,IAAID,EAAkBV,GACjC,IAAK,kBACD,MAAQS,QAASG,SAA+BD,OAAO,sCACvD,OAAO,IAAIC,EAAqBZ,GACpC,QACI,OAAO,KAEnB,GAUM,SAAUa,EACZb,EACAc,GAEA,GAAyB,iBAAdA,EAAO,GAAiB,CAC/B,IAAKd,EACD,MAAM,IAAIe,MAAM,0EAEpB,OAAOhB,EAAiBC,EAAQc,EACpC,CACA,OAAOA,CACX,CASM,SAAUE,EAAgBF,GAC5B,MAAyB,iBAAdA,EAAO,GACPA,EAEHA,EAA6BG,IAAKC,GAAMA,EAAEb,GACtD"}
+{"version":3,"file":"track_config.js","sources":["../../src/utils/track_config.tsx"],"sourcesContent":[null],"names":["findTrackConfigs","config","trackIds","filter","c","includes","id","resolveServiceTrackReader","trackType","__awaiter","default","GWASServiceReader","VariantServiceReader","resolveTrackConfigs","tracks","Error","resolveTrackIds","map","t"],"mappings":"kCAQO,MAAMA,EAAmB,CAACC,EAA2BC,IACxDD,EAAOE,OAAQC,GAAMF,EAASG,SAASD,EAAEE,KAShCC,EAA4B,CAAON,EAAaO,IAAqBC,cAAA,OAAA,EAAA,YAG9E,OAAQD,GACJ,IAAK,eACD,MAAQE,QAASC,gBAAmC,mCACpD,OAAO,IAAIA,EAAkBV,GACjC,IAAK,kBACD,MAAQS,QAASE,gBAAsC,sCACvD,OAAO,IAAIA,EAAqBX,GACpC,QACI,OAAO,KAEnB,GAUM,SAAUY,EACZZ,EACAa,GAEA,GAAyB,iBAAdA,EAAO,GAAiB,CAC/B,IAAKb,EACD,MAAM,IAAIc,MAAM,0EAEpB,OAAOf,EAAiBC,EAAQa,EACpC,CACA,OAAOA,CACX,CASM,SAAUE,EAAgBF,GAC5B,MAAyB,iBAAdA,EAAO,GACPA,EAEHA,EAA6BG,IAAKC,GAAMA,EAAEZ,GACtD"}

package/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@niagads/igv",
-    "version": "0.2.1",
+    "version": "0.2.2-alpha.50.sha-4609cab7",
     "description": "NIAGADS IGV Browser Component",
     "repository": {
         "type": "git",
@@ -12,9 +12,9 @@
     },
     "dependencies": {
         "@niagads/common": "^0.2.1",
-        "@niagads/table": "^0.2.1",
+        "@niagads/table": "^0.2.2-alpha.50.sha-4609cab7",
         "@niagads/ui": "^0.2.1",
-        "igv": "github:NIAGADS/igv.js#NIAGADS-01102025",
+        "igv": "git+https://github.com/NIAGADS/igv.js#NIAGADS-01102025",
         "jquery": "^3.7.1",
         "tslib": "^2"
     },
@@ -45,5 +45,5 @@
             "types": "./dist/index.d.ts"
         }
     },
-    "gitHead": "1b4b46ea64e779b861797e1a25523e1020e41d93"
+    "gitHead": "4609cab7db8b60699ff04c9258daa25249cf3f30"
 }