@nfdi4plants/arctrl 3.0.0-beta.8 → 3.0.0-beta.9

package/dist/ts/ts/Core/DataMap.js

@@ -77,6 +77,84 @@ class DataMap {
     this.staticHash = 0;
     this["dataContexts@108"] = dataContexts;
   }
+  get StaticHash() {
+    const this$ = this;
+    return this$.staticHash | 0;
+  }
+  set StaticHash(value) {
+    const this$ = this;
+    this$.staticHash = value | 0;
+  }
+  get DataContexts() {
+    const this$ = this;
+    return this$["dataContexts@108"];
+  }
+  static init() {
+    return new DataMap([]);
+  }
+  GetExplicationColumn() {
+    const this$ = this;
+    return DataMapAux_getOntologyColumn(DataContext__get_Explication, this$["dataContexts@108"]);
+  }
+  SetExplicationColumn(cells) {
+    const this$ = this;
+    DataMapAux_setOntologyColumn((dc, oa) => {
+      DataContext__set_Explication_279AAFF2(dc, oa);
+    }, cells, this$["dataContexts@108"]);
+  }
+  GetUnitColumn() {
+    const this$ = this;
+    return DataMapAux_getOntologyColumn(DataContext__get_Unit, this$["dataContexts@108"]);
+  }
+  SetUnitColumn(cells) {
+    const this$ = this;
+    DataMapAux_setOntologyColumn((dc, oa) => {
+      DataContext__set_Unit_279AAFF2(dc, oa);
+    }, cells, this$["dataContexts@108"]);
+  }
+  GetObjectTypeColumn() {
+    const this$ = this;
+    return DataMapAux_getOntologyColumn(DataContext__get_ObjectType, this$["dataContexts@108"]);
+  }
+  SetDataTypeColumn(cells) {
+    const this$ = this;
+    DataMapAux_setOntologyColumn((dc, oa) => {
+      DataContext__set_ObjectType_279AAFF2(dc, oa);
+    }, cells, this$["dataContexts@108"]);
+  }
+  GetLabelColumn() {
+    const this$ = this;
+    return DataMapAux_getStringColumn((dc) => dc.Name, this$["dataContexts@108"]);
+  }
+  SetLabelColumn(cells) {
+    const this$ = this;
+    DataMapAux_setStringColumn((dc, s) => {
+      dc.Name = s;
+    }, cells, this$["dataContexts@108"]);
+  }
+  GetDescriptionColumn() {
+    const this$ = this;
+    return DataMapAux_getStringColumn(DataContext__get_Description, this$["dataContexts@108"]);
+  }
+  SetDescriptionColumn(cells) {
+    const this$ = this;
+    DataMapAux_setStringColumn((dc, s) => {
+      DataContext__set_Description_6DFDD678(dc, s);
+    }, cells, this$["dataContexts@108"]);
+  }
+  GetDataContext(row, SkipValidation) {
+    const this$ = this;
+    DataMapAux_SanityChecks_rowIndexInBoundaries(row, this$["dataContexts@108"]);
+    return this$["dataContexts@108"][row];
+  }
+  static getDataContext(row, SkipValidation) {
+    return (dm) => dm.GetDataContext(row, SkipValidation);
+  }
+  Copy() {
+    let collection;
+    const this$ = this;
+    return new DataMap((collection = map(DataContext__Copy, this$["dataContexts@108"]), Array.from(collection)));
+  }
   Equals(obj) {
     const this$ = this;
     return hash(this$) === hash(obj);
@@ -85,6 +163,9 @@ class DataMap {
     const this$ = this;
     return boxHashSeq(this$["dataContexts@108"]) | 0;
   }
+  static get FileName() {
+    return "isa.datamap.xlsx";
+  }
 }
 function DataMap_$reflection() {
   return class_type("ARCtrl.DataMap", void 0, DataMap);
@@ -92,68 +173,5 @@ function DataMap_$reflection() {
 function DataMap_$ctor_4E3220A7(dataContexts) {
   return new DataMap(dataContexts);
 }
-function DataMap__get_StaticHash(this$) {
-  return this$.staticHash;
-}
-function DataMap__set_StaticHash_Z524259A4(this$, value) {
-  this$.staticHash = value | 0;
-}
-function DataMap__get_DataContexts(this$) {
-  return this$["dataContexts@108"];
-}
-function DataMap_init() {
-  return DataMap_$ctor_4E3220A7([]);
-}
-function DataMap__GetExplicationColumn(this$) {
-  return DataMapAux_getOntologyColumn(DataContext__get_Explication, this$["dataContexts@108"]);
-}
-function DataMap__SetExplicationColumn_C98E589(this$, cells) {
-  DataMapAux_setOntologyColumn((dc, oa) => {
-    DataContext__set_Explication_279AAFF2(dc, oa);
-  }, cells, this$["dataContexts@108"]);
-}
-function DataMap__GetUnitColumn(this$) {
-  return DataMapAux_getOntologyColumn(DataContext__get_Unit, this$["dataContexts@108"]);
-}
-function DataMap__SetUnitColumn_C98E589(this$, cells) {
-  DataMapAux_setOntologyColumn((dc, oa) => {
-    DataContext__set_Unit_279AAFF2(dc, oa);
-  }, cells, this$["dataContexts@108"]);
-}
-function DataMap__GetObjectTypeColumn(this$) {
-  return DataMapAux_getOntologyColumn(DataContext__get_ObjectType, this$["dataContexts@108"]);
-}
-function DataMap__SetDataTypeColumn_C98E589(this$, cells) {
-  DataMapAux_setOntologyColumn((dc, oa) => {
-    DataContext__set_ObjectType_279AAFF2(dc, oa);
-  }, cells, this$["dataContexts@108"]);
-}
-function DataMap__GetLabelColumn(this$) {
-  return DataMapAux_getStringColumn((dc) => dc.Name, this$["dataContexts@108"]);
-}
-function DataMap__SetLabelColumn_C98E589(this$, cells) {
-  DataMapAux_setStringColumn((dc, s) => {
-    dc.Name = s;
-  }, cells, this$["dataContexts@108"]);
-}
-function DataMap__GetDescriptionColumn(this$) {
-  return DataMapAux_getStringColumn(DataContext__get_Description, this$["dataContexts@108"]);
-}
-function DataMap__SetDescriptionColumn_C98E589(this$, cells) {
-  DataMapAux_setStringColumn((dc, s) => {
-    DataContext__set_Description_6DFDD678(dc, s);
-  }, cells, this$["dataContexts@108"]);
-}
-function DataMap__GetDataContext_Z58338566(this$, row, SkipValidation) {
-  DataMapAux_SanityChecks_rowIndexInBoundaries(row, this$["dataContexts@108"]);
-  return this$["dataContexts@108"][row];
-}
-function DataMap_getDataContext_Z58338566(row, SkipValidation) {
-  return (dm) => DataMap__GetDataContext_Z58338566(dm, row, SkipValidation);
-}
-function DataMap__Copy(this$) {
-  let collection;
-  return DataMap_$ctor_4E3220A7((collection = map(DataContext__Copy, this$["dataContexts@108"]), Array.from(collection)));
-}
 
-export { DataMap, DataMapAux_SanityChecks_lengthOfNewColumn, DataMapAux_SanityChecks_rowIndexInBoundaries, DataMapAux_allowedHeaders, DataMapAux_dataHeader, DataMapAux_descriptionHeader, DataMapAux_explication, DataMapAux_explicationHeader, DataMapAux_generatedByHeader, DataMapAux_getOntologyColumn, DataMapAux_getStringColumn, DataMapAux_labelHeader, DataMapAux_objectType, DataMapAux_objectTypeHeader, DataMapAux_setOntologyColumn, DataMapAux_setStringColumn, DataMapAux_unit, DataMapAux_unitHeader, DataMap_$ctor_4E3220A7, DataMap_$reflection, DataMap__Copy, DataMap__GetDataContext_Z58338566, DataMap__GetDescriptionColumn, DataMap__GetExplicationColumn, DataMap__GetLabelColumn, DataMap__GetObjectTypeColumn, DataMap__GetUnitColumn, DataMap__SetDataTypeColumn_C98E589, DataMap__SetDescriptionColumn_C98E589, DataMap__SetExplicationColumn_C98E589, DataMap__SetLabelColumn_C98E589, DataMap__SetUnitColumn_C98E589, DataMap__get_DataContexts, DataMap__get_StaticHash, DataMap__set_StaticHash_Z524259A4, DataMap_getDataContext_Z58338566, DataMap_init };
+export { DataMap, DataMapAux_SanityChecks_lengthOfNewColumn, DataMapAux_SanityChecks_rowIndexInBoundaries, DataMapAux_allowedHeaders, DataMapAux_dataHeader, DataMapAux_descriptionHeader, DataMapAux_explication, DataMapAux_explicationHeader, DataMapAux_generatedByHeader, DataMapAux_getOntologyColumn, DataMapAux_getStringColumn, DataMapAux_labelHeader, DataMapAux_objectType, DataMapAux_objectTypeHeader, DataMapAux_setOntologyColumn, DataMapAux_setStringColumn, DataMapAux_unit, DataMapAux_unitHeader, DataMap_$ctor_4E3220A7, DataMap_$reflection };

package/dist/ts/ts/Json/DataMap/DataMap.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/DataMap/DataMap.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AACjH,OAAO,EAA0B,OAAO,EAA6B,MAAM,uBAAuB,CAAC;AAEnG,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AACtE,OAAO,EAAE,oBAAoB,EAAE,MAAM,mCAAmC,CAAC;AAEzE,wBAAgB,OAAO,CAAC,EAAE,EAAE,OAAO,GAAG,UAAU,CAQ/C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,OAAO,CAGrC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,EAAE,EAAE,OAAO,GAAG,UAAU,CAEnL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,CAE7I"}
+{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/DataMap/DataMap.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AACjH,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAEhD,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AACtE,OAAO,EAAE,oBAAoB,EAAE,MAAM,mCAAmC,CAAC;AAEzE,wBAAgB,OAAO,CAAC,EAAE,EAAE,OAAO,GAAG,UAAU,CAQ/C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,OAAO,CAGrC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,EAAE,EAAE,OAAO,GAAG,UAAU,CAEnL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,CAE7I"}

package/dist/ts/ts/Json/DataMap/DataMap.js

@@ -1,11 +1,11 @@
 import { seq } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { encoder as encoder$1, decoder as decoder$1 } from './DataContext.js';
-import { DataMap__get_DataContexts, DataMap_$ctor_4E3220A7 } from '../../Core/DataMap.js';
+import { DataMap } from '../../Core/DataMap.js';
 import { object, resizeArray } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
 function encoder(dm) {
-  const values_1 = [["dataContexts", seq(map(encoder$1, DataMap__get_DataContexts(dm)))]];
+  const values_1 = [["dataContexts", seq(map(encoder$1, dm.DataContexts))]];
   return {
     Encode(helpers) {
       const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers)], values_1);
@@ -15,7 +15,7 @@ function encoder(dm) {
 }
 const decoder = object((get$) => {
   let arg_1, objectArg;
-  return DataMap_$ctor_4E3220A7((arg_1 = resizeArray(decoder$1), objectArg = get$.Required, objectArg.Field("dataContexts", arg_1)));
+  return new DataMap((arg_1 = resizeArray(decoder$1), objectArg = get$.Required, objectArg.Field("dataContexts", arg_1)));
 });
 function encoderCompressed(stringTable, oaTable, cellTable, dm) {
   return encoder(dm);

package/dist/ts/ts/Spreadsheet/DataMap.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Spreadsheet/DataMap.ts"],"names":[],"mappings":"AAKA,OAAO,EAAgB,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAC3D,OAAO,EAAE,UAAU,EAAE,MAAM,+DAA+D,CAAC;AAE3F;;GAEG;AACH,wBAAgB,cAAc,CAAC,GAAG,EAAE,UAAU,GAAG,OAAO,CAoBvD;AAED,wBAAgB,YAAY,CAAC,OAAO,EAAE,OAAO,GAAG,UAAU,CAKzD"}
+{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Spreadsheet/DataMap.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAC7C,OAAO,EAAE,UAAU,EAAE,MAAM,+DAA+D,CAAC;AAE3F;;GAEG;AACH,wBAAgB,cAAc,CAAC,GAAG,EAAE,UAAU,GAAG,OAAO,CAoBvD;AAED,wBAAgB,YAAY,CAAC,OAAO,EAAE,OAAO,GAAG,UAAU,CAKzD"}

package/dist/ts/ts/Spreadsheet/DataMap.js

@@ -2,7 +2,7 @@ import { toFail, printf } from '../../node_modules/@fable-org/fable-library-js/S
 import { tryPick, forAll } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { tryFromFsWorksheet, toFsWorksheet } from './DataMapTable/DataMapTable.js';
 import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { DataMap_init } from '../Core/DataMap.js';
+import { DataMap } from '../Core/DataMap.js';
 import { FsWorkbook } from '../fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorkbook.fs.js';
 
 function fromFsWorkbook(doc) {
@@ -11,7 +11,7 @@ function fromFsWorkbook(doc) {
     const dataMapTable = tryPick(tryFromFsWorksheet, worksheets);
     if (dataMapTable == null) {
       if (forAll((sheet) => sheet.CellCollection.Count === 0, worksheets)) {
-        return DataMap_init();
+        return DataMap.init();
       } else {
         throw new Error("No DataMapTable was found in any of the sheets of the workbook");
       }

package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"DataMapTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/DataMapTable/DataMapTable.ts"],"names":[],"mappings":"AAAA,OAAO,EAAiD,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEzH,OAAO,EAAE,QAAQ,EAAE,MAAM,gEAAgE,CAAC;AAE1F,OAAO,EAAE,OAAO,EAAE,MAAM,sEAAsE,CAAC;AAC/F,OAAO,EAAE,WAAW,EAAE,MAAM,mEAAmE,CAAC;AAChG,OAAO,EAAoB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEjF,OAAO,EAAE,WAAW,EAA+B,MAAM,2BAA2B,CAAC;AAIrF,OAAO,EAA6B,OAAO,EAA0B,MAAM,uBAAuB,CAAC;AAQnG,eAAO,MAAM,mBAAmB,EAAE,UAAU,CAAC,MAAM,CAAgG,CAAC;AAEpJ,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,UAAU,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC,CAKpG;AAED;;GAEG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAEnE;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,WAAW,EAAE,CAOzE;AAED;;GAEG;AACH,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAgBtE;AAED,wBAAgB,aAAa,CAAC,KAAK,EAAE,OAAO,GAAG,WAAW,CAqCzD"}
+{"version":3,"file":"DataMapTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/DataMapTable/DataMapTable.ts"],"names":[],"mappings":"AAAA,OAAO,EAAiD,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEzH,OAAO,EAAE,QAAQ,EAAE,MAAM,gEAAgE,CAAC;AAE1F,OAAO,EAAE,OAAO,EAAE,MAAM,sEAAsE,CAAC;AAC/F,OAAO,EAAE,WAAW,EAAE,MAAM,mEAAmE,CAAC;AAChG,OAAO,EAAoB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEjF,OAAO,EAAE,WAAW,EAA+B,MAAM,2BAA2B,CAAC;AAIrF,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAQhD,eAAO,MAAM,mBAAmB,EAAE,UAAU,CAAC,MAAM,CAAgG,CAAC;AAEpJ,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,UAAU,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC,CAKpG;AAED;;GAEG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAEnE;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,WAAW,EAAE,CAOzE;AAED;;GAEG;AACH,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAgBtE;AAED,wBAAgB,aAAa,CAAC,KAAK,EAAE,OAAO,GAAG,WAAW,CAqCzD"}

package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.js

@@ -7,7 +7,7 @@ import { DataContext_$ctor_Z780A8A2A } from '../../Core/DataContext.js';
 import { rangeDouble } from '../../../node_modules/@fable-org/fable-library-js/Range.js';
 import { setFromFsColumns, toFsColumns } from './DataMapColumn.js';
 import { toFail, printf } from '../../../node_modules/@fable-org/fable-library-js/String.js';
-import { DataMap_$ctor_4E3220A7, DataMap__get_DataContexts } from '../../Core/DataMap.js';
+import { DataMap } from '../../Core/DataMap.js';
 import { FsRangeAddress } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeAddress.fs.js';
 import { FsAddress } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsAddress.fs.js';
 import { Dictionary_tryGet } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCellsCollection.fs.js';
@@ -38,7 +38,7 @@ function tryFromFsWorksheet(sheet) {
       return void 0;
     } else {
       const t = value(matchValue);
-      return DataMap_$ctor_4E3220A7(composeColumns(t.GetColumns(sheet.CellCollection)));
+      return new DataMap(composeColumns(t.GetColumns(sheet.CellCollection)));
     }
   } catch (err) {
     const arg = sheet.Name;
@@ -49,10 +49,10 @@ function tryFromFsWorksheet(sheet) {
 function toFsWorksheet(table) {
   const stringCount = /* @__PURE__ */ new Map([]);
   const ws = new FsWorksheet("isa_datamap");
-  if (DataMap__get_DataContexts(table).length === 0) {
+  if (table.DataContexts.length === 0) {
     return ws;
   } else {
-    const columns = toFsColumns(DataMap__get_DataContexts(table));
+    const columns = toFsColumns(table.DataContexts);
     const maxRow = length(head(columns)) | 0;
     const maxCol = length(columns) | 0;
     const fsTable = ws.Table("datamapTable", new FsRangeAddress(new FsAddress(1, 1), new FsAddress(maxRow, maxCol)));

package/package.json

@@ -1,7 +1,7 @@
 {
   "type": "module",
   "name": "@nfdi4plants/arctrl",
-  "version": "3.0.0-beta.8",
+  "version": "3.0.0-beta.9",
   "description": "Top level ARC DataModel and API function descriptions.",
   "repository": {
     "type": "git",