@nfdi4plants/arctrl 3.0.0-beta.3 → 3.0.0-beta.5

package/dist/ts/ts/Json/context/rocrate/isa_study_context.js

@@ -0,0 +1,77 @@
+import { map } from '../../../../node_modules/@fable-org/fable-library-js/Seq.js';
+
+const context_jsonvalue = /* @__PURE__ */ (() => {
+  const values = [["sdo", {
+    Encode(helpers) {
+      return helpers.encodeString("http://schema.org/");
+    }
+  }], ["Study", {
+    Encode(helpers_1) {
+      return helpers_1.encodeString("sdo:Dataset");
+    }
+  }], ["identifier", {
+    Encode(helpers_2) {
+      return helpers_2.encodeString("sdo:identifier");
+    }
+  }], ["title", {
+    Encode(helpers_3) {
+      return helpers_3.encodeString("sdo:headline");
+    }
+  }], ["additionalType", {
+    Encode(helpers_4) {
+      return helpers_4.encodeString("sdo:additionalType");
+    }
+  }], ["description", {
+    Encode(helpers_5) {
+      return helpers_5.encodeString("sdo:description");
+    }
+  }], ["submissionDate", {
+    Encode(helpers_6) {
+      return helpers_6.encodeString("sdo:dateCreated");
+    }
+  }], ["publicReleaseDate", {
+    Encode(helpers_7) {
+      return helpers_7.encodeString("sdo:datePublished");
+    }
+  }], ["publications", {
+    Encode(helpers_8) {
+      return helpers_8.encodeString("sdo:citation");
+    }
+  }], ["people", {
+    Encode(helpers_9) {
+      return helpers_9.encodeString("sdo:creator");
+    }
+  }], ["assays", {
+    Encode(helpers_10) {
+      return helpers_10.encodeString("sdo:hasPart");
+    }
+  }], ["dataFiles", {
+    Encode(helpers_11) {
+      return helpers_11.encodeString("sdo:hasPart");
+    }
+  }], ["filename", {
+    Encode(helpers_12) {
+      return helpers_12.encodeString("sdo:alternateName");
+    }
+  }], ["comments", {
+    Encode(helpers_13) {
+      return helpers_13.encodeString("sdo:comment");
+    }
+  }], ["processSequence", {
+    Encode(helpers_14) {
+      return helpers_14.encodeString("sdo:about");
+    }
+  }], ["studyDesignDescriptors", {
+    Encode(helpers_15) {
+      return helpers_15.encodeString("arc:ARC#ARC_00000037");
+    }
+  }]];
+  return {
+    Encode(helpers_16) {
+      const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_16)], values);
+      return helpers_16.encodeObject(arg);
+    }
+  };
+})();
+
+export { context_jsonvalue };

package/dist/ts/ts/Json/context/rocrate/property_value_context.d.ts

@@ -1,3 +1,3 @@
-import { IEncodable } from '../../../fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js';
+import { IEncodable } from '../../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
 export declare const context_jsonvalue: IEncodable;
 //# sourceMappingURL=property_value_context.d.ts.map

package/dist/ts/ts/Json/context/rocrate/property_value_context.js

@@ -0,0 +1,61 @@
+import { map } from '../../../../node_modules/@fable-org/fable-library-js/Seq.js';
+
+const context_jsonvalue = /* @__PURE__ */ (() => {
+  const values = [["sdo", {
+    Encode(helpers) {
+      return helpers.encodeString("http://schema.org/");
+    }
+  }], ["additionalType", {
+    Encode(helpers_1) {
+      return helpers_1.encodeString("sdo:additionalType");
+    }
+  }], ["alternateName", {
+    Encode(helpers_2) {
+      return helpers_2.encodeString("sdo:alternateName");
+    }
+  }], ["measurementMethod", {
+    Encode(helpers_3) {
+      return helpers_3.encodeString("sdo:measurementMethod");
+    }
+  }], ["description", {
+    Encode(helpers_4) {
+      return helpers_4.encodeString("sdo:description");
+    }
+  }], ["category", {
+    Encode(helpers_5) {
+      return helpers_5.encodeString("sdo:name");
+    }
+  }], ["categoryCode", {
+    Encode(helpers_6) {
+      return helpers_6.encodeString("sdo:propertyID");
+    }
+  }], ["value", {
+    Encode(helpers_7) {
+      return helpers_7.encodeString("sdo:value");
+    }
+  }], ["valueCode", {
+    Encode(helpers_8) {
+      return helpers_8.encodeString("sdo:valueReference");
+    }
+  }], ["unit", {
+    Encode(helpers_9) {
+      return helpers_9.encodeString("sdo:unitText");
+    }
+  }], ["unitCode", {
+    Encode(helpers_10) {
+      return helpers_10.encodeString("sdo:unitCode");
+    }
+  }], ["comments", {
+    Encode(helpers_11) {
+      return helpers_11.encodeString("sdo:disambiguatingDescription");
+    }
+  }]];
+  return {
+    Encode(helpers_12) {
+      const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_12)], values);
+      return helpers_12.encodeObject(arg);
+    }
+  };
+})();
+
+export { context_jsonvalue };

package/dist/ts/ts/Json/context/rocrate/rocrate_context.d.ts

@@ -1,7 +1,7 @@
 import { Record } from '@fable-org/fable-library-js/Types.js';
 import { IComparable, IEquatable } from '@fable-org/fable-library-js/Util.js';
 import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { IEncodable } from '../../../fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js';
+import { IEncodable } from '../../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
 export declare class IContext extends Record implements IEquatable<IContext>, IComparable<IContext> {
     readonly sdo: string;
     readonly arc: string;

package/dist/ts/ts/Json.d.ts

@@ -1,7 +1,7 @@
 import { OntologyAnnotation } from './Core/OntologyAnnotation.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { ArcInvestigation, ArcStudy, ArcAssay } from './Core/ArcTypes.js';
+import { ArcInvestigation, ArcRun, ArcWorkflow, ArcStudy, ArcAssay } from './Core/ArcTypes.js';
 import { FSharpList } from '@fable-org/fable-library-js/List.js';
 import { ARC } from './ARC.js';
 import { LDNode, LDGraph } from './ROCrate/LDObject.js';
@@ -42,6 +42,24 @@ export declare class JsonHelper_StudyJson {
 }
 export declare function JsonHelper_StudyJson_$reflection(): TypeInfo;
 export declare function JsonHelper_StudyJson_$ctor(): JsonHelper_StudyJson;
+export declare class JsonHelper_WorkflowJson {
+    constructor();
+    fromJsonString(s: string): ArcWorkflow;
+    fromCompressedJsonString(s: string): ArcWorkflow;
+    toJsonString(workflow: ArcWorkflow, spaces?: int32): string;
+    toCompressedJsonString(workflow: ArcWorkflow, spaces?: int32): string;
+}
+export declare function JsonHelper_WorkflowJson_$reflection(): TypeInfo;
+export declare function JsonHelper_WorkflowJson_$ctor(): JsonHelper_WorkflowJson;
+export declare class JsonHelper_RunJson {
+    constructor();
+    fromJsonString(s: string): ArcRun;
+    fromCompressedJsonString(s: string): ArcRun;
+    toJsonString(run: ArcRun, spaces?: int32): string;
+    toCompressedJsonString(run: ArcRun, spaces?: int32): string;
+}
+export declare function JsonHelper_RunJson_$reflection(): TypeInfo;
+export declare function JsonHelper_RunJson_$ctor(): JsonHelper_RunJson;
 export declare class JsonHelper_InvestigationJson {
     constructor();
     fromJsonString(s: string): ArcInvestigation;
@@ -81,6 +99,8 @@ export declare class JsonController {
     static get OntologyAnnotation(): JsonHelper_OntologyAnnotationJson;
     static get Assay(): JsonHelper_AssayJson;
     static get Study(): JsonHelper_StudyJson;
+    static get Workflow(): JsonHelper_WorkflowJson;
+    static get Run(): JsonHelper_RunJson;
     static get Investigation(): JsonHelper_InvestigationJson;
     static get ARC(): JsonHelper_ARCJson;
     static get LDGraph(): JsonHelper_LDGraphJson;

package/dist/ts/ts/Json.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"Json.d.ts","sourceRoot":"","sources":["../../../src/ARCtrl/ts/Json.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,kBAAkB,EAAE,MAAM,8BAA8B,CAAC;AAElE,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,OAAO,EAAE,gBAAgB,EAAE,MAAM,EAAE,WAAW,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAE/F,OAAO,EAAE,UAAU,EAAE,MAAM,qCAAqC,CAAC;AAIjE,OAAO,EAAE,GAAG,EAAE,MAAM,UAAU,CAAC;AAE/B,OAAO,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAExD,qBAAa,iCAAiC;;IAG1C,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,kBAAkB;IAG7C,iBAAiB,CAAC,CAAC,EAAE,MAAM,GAAG,kBAAkB;IAGhD,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,kBAAkB;IAGpD,YAAY,CAAC,EAAE,EAAE,kBAAkB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG5D,eAAe,CAAC,EAAE,EAAE,kBAAkB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG/D,mBAAmB,CAAC,EAAE,EAAE,kBAAkB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAGtE;AAED,wBAAgB,6CAA6C,IAAI,QAAQ,CAExE;AAED,wBAAgB,uCAAuC,IAAI,iCAAiC,CAE3F;AAED,qBAAa,oBAAoB;;IAG7B,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAGnC,wBAAwB,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAG7C,iBAAiB,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAGtC,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAG1C,YAAY,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAGrD,sBAAsB,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG/D,eAAe,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,KAAK,EAAE,gBAAgB,CAAC,EAAE,OAAO,GAAG,MAAM;IAGpF,mBAAmB,CAAC,KAAK,EAAE,QAAQ,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAGlF;AAED,wBAAgB,gCAAgC,IAAI,QAAQ,CAE3D;AAED,wBAAgB,0BAA0B,IAAI,oBAAoB,CAEjE;AAED,qBAAa,oBAAoB;;IAG7B,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAGnC,wBAAwB,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;IAG7C,iBAAiB,CAAC,CAAC,EAAE,MAAM,GAAG,CAAC,QAAQ,EAAE,UAAU,CAAC,QAAQ,CAAC,CAAC;IAG9D,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,CAAC,QAAQ,EAAE,UAAU,CAAC,QAAQ,CAAC,CAAC;IAGlE,YAAY,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAGrD,sBAAsB,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG/D,eAAe,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,UAAU,CAAC,QAAQ,CAAC,EAAE,MAAM,CAAC,EAAE,KAAK,EAAE,gBAAgB,CAAC,EAAE,OAAO,GAAG,MAAM;IAGnH,mBAAmB,CAAC,KAAK,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,UAAU,CAAC,QAAQ,CAAC,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAG9F;AAED,wBAAgB,gCAAgC,IAAI,QAAQ,CAE3D;AAED,wBAAgB,0BAA0B,IAAI,oBAAoB,CAEjE;AAED,qBAAa,uBAAuB;;IAGhC,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,WAAW;IAGtC,wBAAwB,CAAC,CAAC,EAAE,MAAM,GAAG,WAAW;IAGhD,YAAY,CAAC,QAAQ,EAAE,WAAW,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG3D,sBAAsB,CAAC,QAAQ,EAAE,WAAW,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAGxE;AAED,wBAAgB,mCAAmC,IAAI,QAAQ,CAE9D;AAED,wBAAgB,6BAA6B,IAAI,uBAAuB,CAEvE;AAED,qBAAa,kBAAkB;;IAG3B,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM;IAGjC,wBAAwB,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM;IAG3C,YAAY,CAAC,GAAG,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAGjD,sBAAsB,CAAC,GAAG,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAG9D;AAED,wBAAgB,8BAA8B,IAAI,QAAQ,CAEzD;AAED,wBAAgB,wBAAwB,IAAI,kBAAkB,CAE7D;AAED,qBAAa,4BAA4B;;IAGrC,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,gBAAgB;IAG3C,wBAAwB,CAAC,CAAC,EAAE,MAAM,GAAG,gBAAgB;IAGrD,iBAAiB,CAAC,CAAC,EAAE,MAAM,GAAG,gBAAgB;IAG9C,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,gBAAgB;IAGlD,YAAY,CAAC,aAAa,EAAE,gBAAgB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAGrE,sBAAsB,CAAC,aAAa,EAAE,gBAAgB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;IAG/E,eAAe,CAAC,aAAa,EAAE,gBAAgB,EAAE,MAAM,CAAC,EAAE,KAAK,EAAE,gBAAgB,CAAC,EAAE,OAAO,GAAG,MAAM;IAGpG,mBAAmB,CAAC,aAAa,EAAE,gBAAgB,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,MAAM;CAG/E;AAED,wBAAgB,wCAAwC,IAAI,QAAQ,CAEnE;AAED,wBAAgB,kCAAkC,IAAI,4BAA4B,CAEjF;AAED,qBAAa,kBAAkB;;IAG3B,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,GAAG;IAGrC,mBAAmB,CAAC,MAAM,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,GAAG,KAAK,MAAM,CAAC;CAG/D;AAED,wBAAgB,8BAA8B,IAAI,QAAQ,CAEzD;AAED,wBAAgB,wBAAwB,IAAI,kBAAkB,CAE7D;AAED,qBAAa,sBAAsB;;IAG/B,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,OAAO;IAGzC,mBAAmB,CAAC,MAAM,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,MAAM,CAAC;CAGnE;AAED,wBAAgB,kCAAkC,IAAI,QAAQ,CAE7D;AAED,wBAAgB,4BAA4B,IAAI,sBAAsB,CAErE;AAED,qBAAa,qBAAqB;;IAG9B,qBAAqB,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM;IAGxC,mBAAmB,CAAC,MAAM,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC;CAGlE;AAED,wBAAgB,iCAAiC,IAAI,QAAQ,CAE5D;AAED,wBAAgB,2BAA2B,IAAI,qBAAqB,CAEnE;AAED,qBAAa,cAAc;;IAGvB,MAAM,KAAK,kBAAkB,IAAI,iCAAiC,CAEjE;IACD,MAAM,KAAK,KAAK,IAAI,oBAAoB,CAEvC;IACD,MAAM,KAAK,KAAK,IAAI,oBAAoB,CAEvC;IACD,MAAM,KAAK,QAAQ,IAAI,uBAAuB,CAE7C;IACD,MAAM,KAAK,GAAG,IAAI,kBAAkB,CAEnC;IACD,MAAM,KAAK,aAAa,IAAI,4BAA4B,CAEvD;IACD,MAAM,KAAK,GAAG,IAAI,kBAAkB,CAEnC;IACD,MAAM,KAAK,OAAO,IAAI,sBAAsB,CAE3C;IACD,MAAM,KAAK,MAAM,IAAI,qBAAqB,CAEzC;CACJ;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}

package/dist/ts/ts/Json.js

@@ -0,0 +1,211 @@
+import { ARCtrl_OntologyAnnotation__OntologyAnnotation_fromJsonString_Static_Z721C83C5, ARCtrl_OntologyAnnotation__OntologyAnnotation_fromISAJsonString_Static_Z721C83C5, ARCtrl_OntologyAnnotation__OntologyAnnotation_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_OntologyAnnotation__OntologyAnnotation_toJsonString_Static_71136F3F, ARCtrl_OntologyAnnotation__OntologyAnnotation_toISAJsonString_Static_71136F3F, ARCtrl_OntologyAnnotation__OntologyAnnotation_toROCrateJsonString_Static_71136F3F } from './JsonIO/OntologyAnnotation.js';
+import { unwrap } from '../node_modules/@fable-org/fable-library-js/Option.js';
+import { ARCtrl_ArcAssay__ArcAssay_fromJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_toJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toISAJsonString_Static_Z3B036AA, ARCtrl_ArcAssay__ArcAssay_toROCrateJsonString_Static_5CABCA47 } from './JsonIO/Assay.js';
+import { ARCtrl_ArcStudy__ArcStudy_fromJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F, ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1, ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086 } from './JsonIO/Study.js';
+import { ARCtrl_ArcWorkflow__ArcWorkflow_fromJsonString_Static_Z721C83C5, ARCtrl_ArcWorkflow__ArcWorkflow_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcWorkflow__ArcWorkflow_toJsonString_Static_71136F3F, ARCtrl_ArcWorkflow__ArcWorkflow_toCompressedJsonString_Static_71136F3F } from './JsonIO/Workflow.js';
+import { ARCtrl_ArcRun__ArcRun_fromJsonString_Static_Z721C83C5, ARCtrl_ArcRun__ArcRun_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcRun__ArcRun_toJsonString_Static_71136F3F, ARCtrl_ArcRun__ArcRun_toCompressedJsonString_Static_71136F3F } from './JsonIO/Run.js';
+import { ARCtrl_ArcInvestigation__ArcInvestigation_fromJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_toJsonString_Static_71136F3F, ARCtrl_ArcInvestigation__ArcInvestigation_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcInvestigation__ArcInvestigation_toISAJsonString_Static_Z3B036AA, ARCtrl_ArcInvestigation__ArcInvestigation_toROCrateJsonString_Static_71136F3F } from './JsonIO/Investigation.js';
+import { ARC } from './ARC.js';
+import { ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F, ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F } from './JsonIO/LDObject.js';
+
+class JsonHelper_OntologyAnnotationJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromISAJsonString(s) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_fromISAJsonString_Static_Z721C83C5(s);
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(oa, spaces) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_toJsonString_Static_71136F3F(unwrap(spaces))(oa);
+  }
+  toISAJsonString(oa, spaces) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_toISAJsonString_Static_71136F3F(unwrap(spaces))(oa);
+  }
+  toROCrateJsonString(oa, spaces) {
+    return ARCtrl_OntologyAnnotation__OntologyAnnotation_toROCrateJsonString_Static_71136F3F(unwrap(spaces))(oa);
+  }
+}
+class JsonHelper_AssayJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_ArcAssay__ArcAssay_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromCompressedJsonString(s) {
+    return ARCtrl_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5(s);
+  }
+  fromISAJsonString(s) {
+    return ARCtrl_ArcAssay__ArcAssay_fromISAJsonString_Static_Z721C83C5(s);
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_ArcAssay__ArcAssay_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(assay, spaces) {
+    return ARCtrl_ArcAssay__ArcAssay_toJsonString_Static_71136F3F(unwrap(spaces))(assay);
+  }
+  toCompressedJsonString(assay, spaces) {
+    return ARCtrl_ArcAssay__ArcAssay_toCompressedJsonString_Static_71136F3F(unwrap(spaces))(assay);
+  }
+  toISAJsonString(assay, spaces, useIDReferencing) {
+    return ARCtrl_ArcAssay__ArcAssay_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(assay);
+  }
+  toROCrateJsonString(assay, studyName, spaces) {
+    return ARCtrl_ArcAssay__ArcAssay_toROCrateJsonString_Static_5CABCA47(studyName, unwrap(spaces))(assay);
+  }
+}
+class JsonHelper_StudyJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_ArcStudy__ArcStudy_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromCompressedJsonString(s) {
+    return ARCtrl_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5(s);
+  }
+  fromISAJsonString(s) {
+    return ARCtrl_ArcStudy__ArcStudy_fromISAJsonString_Static_Z721C83C5(s);
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_ArcStudy__ArcStudy_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(study, spaces) {
+    return ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F(unwrap(spaces))(study);
+  }
+  toCompressedJsonString(study, spaces) {
+    return ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F(unwrap(spaces))(study);
+  }
+  toISAJsonString(study, assays, spaces, useIDReferencing) {
+    return ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1(unwrap(assays), unwrap(spaces), unwrap(useIDReferencing))(study);
+  }
+  toROCrateJsonString(study, assays, spaces) {
+    return ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086(unwrap(assays), unwrap(spaces))(study);
+  }
+}
+class JsonHelper_WorkflowJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_ArcWorkflow__ArcWorkflow_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromCompressedJsonString(s) {
+    return ARCtrl_ArcWorkflow__ArcWorkflow_fromCompressedJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(workflow, spaces) {
+    return ARCtrl_ArcWorkflow__ArcWorkflow_toJsonString_Static_71136F3F(unwrap(spaces))(workflow);
+  }
+  toCompressedJsonString(workflow, spaces) {
+    return ARCtrl_ArcWorkflow__ArcWorkflow_toCompressedJsonString_Static_71136F3F(unwrap(spaces))(workflow);
+  }
+}
+class JsonHelper_RunJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_ArcRun__ArcRun_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromCompressedJsonString(s) {
+    return ARCtrl_ArcRun__ArcRun_fromCompressedJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(run, spaces) {
+    return ARCtrl_ArcRun__ArcRun_toJsonString_Static_71136F3F(unwrap(spaces))(run);
+  }
+  toCompressedJsonString(run, spaces) {
+    return ARCtrl_ArcRun__ArcRun_toCompressedJsonString_Static_71136F3F(unwrap(spaces))(run);
+  }
+}
+class JsonHelper_InvestigationJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_fromJsonString_Static_Z721C83C5(s);
+  }
+  fromCompressedJsonString(s) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_fromCompressedJsonString_Static_Z721C83C5(s);
+  }
+  fromISAJsonString(s) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_fromISAJsonString_Static_Z721C83C5(s);
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(investigation, spaces) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_toJsonString_Static_71136F3F(unwrap(spaces))(investigation);
+  }
+  toCompressedJsonString(investigation, spaces) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_toCompressedJsonString_Static_71136F3F(unwrap(spaces))(investigation);
+  }
+  toISAJsonString(investigation, spaces, useIDReferencing) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(investigation);
+  }
+  toROCrateJsonString(investigation, spaces) {
+    return ARCtrl_ArcInvestigation__ArcInvestigation_toROCrateJsonString_Static_71136F3F(unwrap(spaces))(investigation);
+  }
+}
+class JsonHelper_ARCJson {
+  constructor() {
+  }
+  fromROCrateJsonString(s) {
+    return ARC.fromROCrateJsonString(s);
+  }
+  toROCrateJsonString(spaces) {
+    return ARC.toROCrateJsonString(unwrap(spaces));
+  }
+}
+class JsonHelper_LDGraphJson {
+  constructor() {
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toROCrateJsonString(spaces) {
+    return ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F(unwrap(spaces));
+  }
+}
+class JsonHelper_LDNodeJson {
+  constructor() {
+  }
+  fromROCrateJsonString(s) {
+    return ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5(s);
+  }
+  toROCrateJsonString(spaces) {
+    return ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F(unwrap(spaces));
+  }
+}
+class JsonController {
+  constructor() {
+  }
+  static get OntologyAnnotation() {
+    return new JsonHelper_OntologyAnnotationJson();
+  }
+  static get Assay() {
+    return new JsonHelper_AssayJson();
+  }
+  static get Study() {
+    return new JsonHelper_StudyJson();
+  }
+  static get Workflow() {
+    return new JsonHelper_WorkflowJson();
+  }
+  static get Run() {
+    return new JsonHelper_RunJson();
+  }
+  static get Investigation() {
+    return new JsonHelper_InvestigationJson();
+  }
+  static get ARC() {
+    return new JsonHelper_ARCJson();
+  }
+  static get LDGraph() {
+    return new JsonHelper_LDGraphJson();
+  }
+  static get LDNode() {
+    return new JsonHelper_LDNodeJson();
+  }
+}
+
+export { JsonController, JsonHelper_ARCJson, JsonHelper_AssayJson, JsonHelper_InvestigationJson, JsonHelper_LDGraphJson, JsonHelper_LDNodeJson, JsonHelper_OntologyAnnotationJson, JsonHelper_RunJson, JsonHelper_StudyJson, JsonHelper_WorkflowJson };

package/dist/ts/ts/JsonIO/Assay.js

@@ -0,0 +1,77 @@
+import { fromString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
+import { decoder, decoderCompressed, ISAJson_decoder, ROCrate_decoder, encoder, ISAJson_encoder, ROCrate_encoder, encoderCompressed } from '../Json/Assay.js';
+import { toText, printf, toFail } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { toString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
+import { defaultSpaces } from '../Json/Encode.js';
+import { defaultArg } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { decode, encode } from './Table/Compression.js';
+
+function ARCtrl_ArcAssay__ArcAssay_fromJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ArcAssay__ArcAssay_toJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = encoder(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5(s) {
+  let arg;
+  try {
+    const matchValue = fromString(decode(decoderCompressed), s);
+    if (matchValue.tag === /* Error */
+    1) {
+      throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+    } else {
+      return matchValue.fields[0];
+    }
+  } catch (e_1) {
+    const arg_1 = e_1.message;
+    return toFail(printf("Error. Unable to parse json string to ArcAssay: %s"))(arg_1);
+  }
+}
+function ARCtrl_ArcAssay__ArcAssay_toCompressedJsonString_Static_71136F3F(spaces) {
+  return (obj) => toString(defaultArg(spaces, 0), encode(encoderCompressed, obj));
+}
+function ARCtrl_ArcAssay__ArcAssay_fromROCrateJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(ROCrate_decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ArcAssay__ArcAssay_toROCrateJsonString_Static_5CABCA47(studyName, spaces) {
+  return (obj) => {
+    const value = ROCrate_encoder(studyName, obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcAssay__ArcAssay_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+  const idMap = defaultArg(useIDReferencing, false) ? /* @__PURE__ */ new Map([]) : void 0;
+  return (obj) => {
+    const value = ISAJson_encoder(void 0, idMap, obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcAssay__ArcAssay_fromISAJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(ISAJson_decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+
+export { ARCtrl_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toISAJsonString_Static_Z3B036AA, ARCtrl_ArcAssay__ArcAssay_toJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toROCrateJsonString_Static_5CABCA47 };

package/dist/ts/ts/JsonIO/Investigation.js

@@ -0,0 +1,77 @@
+import { fromString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
+import { decoder, decoderCompressed, ISAJson_decoder, ROCrate_decoder, encoder, ISAJson_encoder, ROCrate_encoder, encoderCompressed } from '../Json/Investigation.js';
+import { toText, printf, toFail } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { toString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
+import { defaultSpaces } from '../Json/Encode.js';
+import { defaultArg } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { decode, encode } from './Table/Compression.js';
+
+function ARCtrl_ArcInvestigation__ArcInvestigation_fromJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_toJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = encoder(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_fromCompressedJsonString_Static_Z721C83C5(s) {
+  let arg;
+  try {
+    const matchValue = fromString(decode(decoderCompressed), s);
+    if (matchValue.tag === /* Error */
+    1) {
+      throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+    } else {
+      return matchValue.fields[0];
+    }
+  } catch (e_1) {
+    const arg_1 = e_1.message;
+    return toFail(printf("Error. Unable to parse json string to ArcStudy: %s"))(arg_1);
+  }
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_toCompressedJsonString_Static_71136F3F(spaces) {
+  return (obj) => toString(defaultArg(spaces, 0), encode(encoderCompressed, obj));
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(ROCrate_decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_toROCrateJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = ROCrate_encoder(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+  const idMap = defaultArg(useIDReferencing, false) ? /* @__PURE__ */ new Map([]) : void 0;
+  return (obj) => {
+    const value = ISAJson_encoder(idMap, obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_ArcInvestigation__ArcInvestigation_fromISAJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(ISAJson_decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+
+export { ARCtrl_ArcInvestigation__ArcInvestigation_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcInvestigation__ArcInvestigation_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcInvestigation__ArcInvestigation_toISAJsonString_Static_Z3B036AA, ARCtrl_ArcInvestigation__ArcInvestigation_toJsonString_Static_71136F3F, ARCtrl_ArcInvestigation__ArcInvestigation_toROCrateJsonString_Static_71136F3F };

package/dist/ts/ts/JsonIO/LDObject.js

@@ -0,0 +1,77 @@
+import { fromString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
+import { encoder, decoder } from '../Json/ROCrate/LDNode.js';
+import { toText, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { toString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
+import { defaultSpaces } from '../Json/Encode.js';
+import { encoder as encoder$1, decoder as decoder$1 } from '../Json/ROCrate/LDGraph.js';
+
+function ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = encoder(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+class LDNodeExtensions_PyJsInterop {
+  constructor() {
+  }
+  static fromROCrateJsonString(s) {
+    let arg;
+    const matchValue = fromString(decoder, s);
+    if (matchValue.tag === /* Error */
+    1) {
+      throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+    } else {
+      return matchValue.fields[0];
+    }
+  }
+  static toROCrateJsonString(node, spaces) {
+    const value = encoder(node);
+    return toString(defaultSpaces(spaces), value);
+  }
+}
+function ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(decoder$1, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = encoder$1(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+class LDGraphExtensions_PyJsInterop {
+  constructor() {
+  }
+  static fromROCrateJsonString(s) {
+    let arg;
+    const matchValue = fromString(decoder$1, s);
+    if (matchValue.tag === /* Error */
+    1) {
+      throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+    } else {
+      return matchValue.fields[0];
+    }
+  }
+  static toROCrateJsonString(graph, spaces) {
+    const value = encoder$1(graph);
+    return toString(defaultSpaces(spaces), value);
+  }
+}
+
+export { ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F, ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F, LDGraphExtensions_PyJsInterop, LDNodeExtensions_PyJsInterop };