@nfdi4plants/arctrl 3.0.0-beta.1 → 3.0.0-beta.10

package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapColumn.js

@@ -1,43 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.setFromFsColumns = setFromFsColumns;
-exports.toFsColumns = toFsColumns;
-const DataMapHeader_js_1 = require("./DataMapHeader.js");
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const FsCell_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.js");
-const DataContext_js_1 = require("../../Core/DataContext.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const Seq2_js_1 = require("@fable-org/fable-library-js/Seq2.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const Util_js_1 = require("@fable-org/fable-library-js/Util.js");
-function setFromFsColumns(dc, columns) {
-    const cellParser = (0, DataMapHeader_js_1.fromFsCells)((0, List_js_1.map)((c) => c.Item(1), columns));
-    for (let i = 0; i <= (dc.length - 1); i++) {
-        cellParser(dc[i])((0, List_js_1.map)((c_1) => c_1.Item(i + 2), columns));
-    }
-    return dc;
-}
-function toFsColumns(dc) {
-    const commentKeys = (0, Seq_js_1.toList)((0, Seq2_js_1.distinct)((0, Seq_js_1.collect)((dc_1) => (0, Seq_js_1.map)((c) => (0, Option_js_1.defaultArg)(c.Name, ""), dc_1.Comments), dc), {
-        Equals: (x, y) => (x === y),
-        GetHashCode: Util_js_1.stringHash,
-    }));
-    const headers = (0, DataMapHeader_js_1.toFsCells)(commentKeys);
-    const createTerm = (oa) => {
-        if (oa == null) {
-            return (0, List_js_1.ofArray)([new FsCell_fs_js_1.FsCell(""), new FsCell_fs_js_1.FsCell(""), new FsCell_fs_js_1.FsCell("")]);
-        }
-        else {
-            const oa_1 = (0, Option_js_1.value)(oa);
-            return (0, List_js_1.ofArray)([new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(oa_1.Name, "")), new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(oa_1.TermSourceREF, "")), new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(oa_1.TermAccessionNumber, ""))]);
-        }
-    };
-    const createText = (s) => (0, List_js_1.singleton)(new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(s, "")));
-    return (0, List_js_1.transpose)((0, Seq_js_1.toList)((0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Seq_js_1.singleton)(headers), (0, Seq_js_1.delay)(() => (0, Seq_js_1.map)((dc_4) => {
-        const dc_3 = dc_4;
-        return (0, Seq_js_1.toList)((0, Seq_js_1.delay)(() => {
-            let dc_2;
-            return (0, Seq_js_1.append)((dc_2 = dc_3, (0, List_js_1.ofArray)([new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(dc_2.Name, "")), new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(dc_2.Format, "")), new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)(dc_2.SelectorFormat, ""))])), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createTerm((0, DataContext_js_1.DataContext__get_Explication)(dc_3)), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createTerm((0, DataContext_js_1.DataContext__get_Unit)(dc_3)), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createTerm((0, DataContext_js_1.DataContext__get_ObjectType)(dc_3)), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createText((0, DataContext_js_1.DataContext__get_Description)(dc_3)), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createText((0, DataContext_js_1.DataContext__get_GeneratedBy)(dc_3)), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)(createText((0, DataContext_js_1.DataContext__get_Label)(dc_3)), (0, Seq_js_1.delay)(() => (0, List_js_1.map)((key) => (new FsCell_fs_js_1.FsCell((0, Option_js_1.defaultArg)((0, Option_js_1.bind)((c_2) => c_2.Value, (0, Seq_js_1.tryFind)((c_1) => ((0, Option_js_1.defaultArg)(c_1.Name, "") === key), dc_3.Comments)), ""))), commentKeys)))))))))))))));
-        }));
-    }, dc))))));
-}

package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapHeader.js

@@ -1,480 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.ActivePattern_ontologyAnnotationFromFsCells = ActivePattern_ontologyAnnotationFromFsCells;
-exports.ActivePattern_freeTextFromFsCells = ActivePattern_freeTextFromFsCells;
-exports.ActivePattern_dataFromFsCells = ActivePattern_dataFromFsCells;
-exports.ActivePattern_$007CTerm$007C_$007C = ActivePattern_$007CTerm$007C_$007C;
-exports.ActivePattern_$007CExplication$007C_$007C = ActivePattern_$007CExplication$007C_$007C;
-exports.ActivePattern_$007CUnit$007C_$007C = ActivePattern_$007CUnit$007C_$007C;
-exports.ActivePattern_$007CObjectType$007C_$007C = ActivePattern_$007CObjectType$007C_$007C;
-exports.ActivePattern_$007CDescription$007C_$007C = ActivePattern_$007CDescription$007C_$007C;
-exports.ActivePattern_$007CGeneratedBy$007C_$007C = ActivePattern_$007CGeneratedBy$007C_$007C;
-exports.ActivePattern_$007CLabel$007C_$007C = ActivePattern_$007CLabel$007C_$007C;
-exports.ActivePattern_$007CData$007C_$007C = ActivePattern_$007CData$007C_$007C;
-exports.ActivePattern_$007CComment$007C_$007C = ActivePattern_$007CComment$007C_$007C;
-exports.ActivePattern_$007CFreetext$007C_$007C = ActivePattern_$007CFreetext$007C_$007C;
-exports.fromFsCells = fromFsCells;
-exports.toFsCells = toFsCells;
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const FsCell_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const OntologyAnnotation_js_1 = require("../../Core/OntologyAnnotation.js");
-const Data_js_1 = require("../../Core/Data.js");
-const DataContext_js_1 = require("../../Core/DataContext.js");
-const Collections_js_1 = require("../../Core/Helper/Collections.js");
-const Comment_js_1 = require("../../Core/Comment.js");
-const Regex_js_1 = require("../../Core/Helper/Regex.js");
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-function ActivePattern_ontologyAnnotationFromFsCells(tsrCol, tanCol, cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    const tsr = (0, Option_js_1.map)((i) => (0, List_js_1.item)(i, cellValues), tsrCol);
-    const tan = (0, Option_js_1.map)((i_1) => (0, List_js_1.item)(i_1, cellValues), tanCol);
-    return new OntologyAnnotation_js_1.OntologyAnnotation((0, List_js_1.item)(0, cellValues), (0, Option_js_1.unwrap)(tsr), (0, Option_js_1.unwrap)(tan));
-}
-function ActivePattern_freeTextFromFsCells(cells) {
-    return (0, List_js_1.item)(0, (0, List_js_1.map)((c) => c.ValueAsString(), cells));
-}
-function ActivePattern_dataFromFsCells(format, selectorFormat, cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    const format_1 = (0, Option_js_1.map)((i) => (0, List_js_1.item)(i, cellValues), format);
-    const selectorFormat_1 = (0, Option_js_1.map)((i_1) => (0, List_js_1.item)(i_1, cellValues), selectorFormat);
-    return new Data_js_1.Data(undefined, (0, List_js_1.item)(0, cellValues), undefined, (0, Option_js_1.unwrap)(format_1), (0, Option_js_1.unwrap)(selectorFormat_1));
-}
-function ActivePattern_$007CTerm$007C_$007C(categoryString, cells) {
-    const $007CAC$007C_$007C = (s) => {
-        if (s === categoryString) {
-            return 1;
-        }
-        else {
-            return undefined;
-        }
-    };
-    const $007CTSRColumnHeaderRaw$007C_$007C = (s_1) => {
-        if (s_1.startsWith("Term Source REF")) {
-            return s_1;
-        }
-        else {
-            return undefined;
-        }
-    };
-    const $007CTANColumnHeaderRaw$007C_$007C = (s_2) => {
-        if (s_2.startsWith("Term Accession Number")) {
-            return s_2;
-        }
-        else {
-            return undefined;
-        }
-    };
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult, header;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        const activePatternResult = $007CAC$007C_$007C((0, List_js_1.head)(cellValues));
-        if (activePatternResult != null) {
-            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                matchResult = 0;
-                header = (0, Option_js_1.value)(activePatternResult);
-            }
-            else {
-                matchResult = 1;
-            }
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (cells_1) => ActivePattern_ontologyAnnotationFromFsCells(undefined, undefined, cells_1);
-        default: {
-            let matchResult_1, header_1;
-            if (!(0, List_js_1.isEmpty)(cellValues)) {
-                const activePatternResult_1 = $007CAC$007C_$007C((0, List_js_1.head)(cellValues));
-                if (activePatternResult_1 != null) {
-                    if (!(0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                        if ($007CTSRColumnHeaderRaw$007C_$007C((0, List_js_1.head)((0, List_js_1.tail)(cellValues))) != null) {
-                            if (!(0, List_js_1.isEmpty)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues)))) {
-                                if ($007CTANColumnHeaderRaw$007C_$007C((0, List_js_1.head)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues)))) != null) {
-                                    if ((0, List_js_1.isEmpty)((0, List_js_1.tail)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues))))) {
-                                        matchResult_1 = 0;
-                                        header_1 = (0, Option_js_1.value)(activePatternResult_1);
-                                    }
-                                    else {
-                                        matchResult_1 = 1;
-                                    }
-                                }
-                                else {
-                                    matchResult_1 = 1;
-                                }
-                            }
-                            else {
-                                matchResult_1 = 1;
-                            }
-                        }
-                        else {
-                            matchResult_1 = 1;
-                        }
-                    }
-                    else {
-                        matchResult_1 = 1;
-                    }
-                }
-                else {
-                    matchResult_1 = 1;
-                }
-            }
-            else {
-                matchResult_1 = 1;
-            }
-            switch (matchResult_1) {
-                case 0:
-                    return (cells_2) => ActivePattern_ontologyAnnotationFromFsCells(1, 2, cells_2);
-                default: {
-                    let matchResult_2, header_2;
-                    if (!(0, List_js_1.isEmpty)(cellValues)) {
-                        const activePatternResult_4 = $007CAC$007C_$007C((0, List_js_1.head)(cellValues));
-                        if (activePatternResult_4 != null) {
-                            if (!(0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                                if ($007CTANColumnHeaderRaw$007C_$007C((0, List_js_1.head)((0, List_js_1.tail)(cellValues))) != null) {
-                                    if (!(0, List_js_1.isEmpty)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues)))) {
-                                        if ($007CTSRColumnHeaderRaw$007C_$007C((0, List_js_1.head)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues)))) != null) {
-                                            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)((0, List_js_1.tail)((0, List_js_1.tail)(cellValues))))) {
-                                                matchResult_2 = 0;
-                                                header_2 = (0, Option_js_1.value)(activePatternResult_4);
-                                            }
-                                            else {
-                                                matchResult_2 = 1;
-                                            }
-                                        }
-                                        else {
-                                            matchResult_2 = 1;
-                                        }
-                                    }
-                                    else {
-                                        matchResult_2 = 1;
-                                    }
-                                }
-                                else {
-                                    matchResult_2 = 1;
-                                }
-                            }
-                            else {
-                                matchResult_2 = 1;
-                            }
-                        }
-                        else {
-                            matchResult_2 = 1;
-                        }
-                    }
-                    else {
-                        matchResult_2 = 1;
-                    }
-                    switch (matchResult_2) {
-                        case 0:
-                            return (cells_3) => ActivePattern_ontologyAnnotationFromFsCells(2, 1, cells_3);
-                        default:
-                            return undefined;
-                    }
-                }
-            }
-        }
-    }
-}
-function ActivePattern_$007CExplication$007C_$007C(cells) {
-    const activePatternResult = ActivePattern_$007CTerm$007C_$007C("Explication", cells);
-    if (activePatternResult != null) {
-        const r = (0, Option_js_1.value)(activePatternResult);
-        return (dc) => ((cells_1) => {
-            (0, DataContext_js_1.DataContext__set_Explication_279AAFF2)(dc, r(cells_1));
-            return dc;
-        });
-    }
-    else {
-        return undefined;
-    }
-}
-function ActivePattern_$007CUnit$007C_$007C(cells) {
-    const activePatternResult = ActivePattern_$007CTerm$007C_$007C("Unit", cells);
-    if (activePatternResult != null) {
-        const r = (0, Option_js_1.value)(activePatternResult);
-        return (dc) => ((cells_1) => {
-            (0, DataContext_js_1.DataContext__set_Unit_279AAFF2)(dc, r(cells_1));
-            return dc;
-        });
-    }
-    else {
-        return undefined;
-    }
-}
-function ActivePattern_$007CObjectType$007C_$007C(cells) {
-    const activePatternResult = ActivePattern_$007CTerm$007C_$007C("Object Type", cells);
-    if (activePatternResult != null) {
-        const r = (0, Option_js_1.value)(activePatternResult);
-        return (dc) => ((cells_1) => {
-            (0, DataContext_js_1.DataContext__set_ObjectType_279AAFF2)(dc, r(cells_1));
-            return dc;
-        });
-    }
-    else {
-        return undefined;
-    }
-}
-function ActivePattern_$007CDescription$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        if ((0, List_js_1.head)(cellValues) === "Description") {
-            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                matchResult = 0;
-            }
-            else {
-                matchResult = 1;
-            }
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                (0, DataContext_js_1.DataContext__set_Description_6DFDD678)(dc, (0, Collections_js_1.Option_fromValueWithDefault)("", ActivePattern_freeTextFromFsCells(cells_1)));
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function ActivePattern_$007CGeneratedBy$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        if ((0, List_js_1.head)(cellValues) === "Generated By") {
-            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                matchResult = 0;
-            }
-            else {
-                matchResult = 1;
-            }
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                (0, DataContext_js_1.DataContext__set_GeneratedBy_6DFDD678)(dc, (0, Collections_js_1.Option_fromValueWithDefault)("", ActivePattern_freeTextFromFsCells(cells_1)));
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function ActivePattern_$007CLabel$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        if ((0, List_js_1.head)(cellValues) === "Label") {
-            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                matchResult = 0;
-            }
-            else {
-                matchResult = 1;
-            }
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                (0, DataContext_js_1.DataContext__set_Label_6DFDD678)(dc, (0, Collections_js_1.Option_fromValueWithDefault)("", ActivePattern_freeTextFromFsCells(cells_1)));
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function ActivePattern_$007CData$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult, cols;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        if ((0, List_js_1.head)(cellValues) === "Data") {
-            matchResult = 0;
-            cols = (0, List_js_1.tail)(cellValues);
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                const d = ActivePattern_dataFromFsCells((0, Option_js_1.map)((y) => (1 + y), (0, List_js_1.tryFindIndex)((s) => s.startsWith("Data Format"), cols)), (0, Option_js_1.map)((y_1) => (1 + y_1), (0, List_js_1.tryFindIndex)((s_1) => s_1.startsWith("Data Selector Format"), cols)), cells_1);
-                dc.FilePath = d.FilePath;
-                dc.Selector = d.Selector;
-                dc.Format = d.Format;
-                dc.SelectorFormat = d.SelectorFormat;
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function ActivePattern_$007CComment$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult, key;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        const activePatternResult = (0, Regex_js_1.ActivePatterns_$007CComment$007C_$007C)((0, List_js_1.head)(cellValues));
-        if (activePatternResult != null) {
-            if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-                matchResult = 0;
-                key = (0, Option_js_1.value)(activePatternResult);
-            }
-            else {
-                matchResult = 1;
-            }
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                const comment = (0, List_js_1.item)(0, (0, List_js_1.map)((c_1) => c_1.ValueAsString(), cells_1));
-                void (dc.Comments.push(Comment_js_1.Comment$.create(key, comment)));
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function ActivePattern_$007CFreetext$007C_$007C(cells) {
-    const cellValues = (0, List_js_1.map)((c) => c.ValueAsString(), cells);
-    let matchResult, key;
-    if (!(0, List_js_1.isEmpty)(cellValues)) {
-        if ((0, List_js_1.isEmpty)((0, List_js_1.tail)(cellValues))) {
-            matchResult = 0;
-            key = (0, List_js_1.head)(cellValues);
-        }
-        else {
-            matchResult = 1;
-        }
-    }
-    else {
-        matchResult = 1;
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => {
-                const comment = (0, List_js_1.item)(0, (0, List_js_1.map)((c_1) => c_1.ValueAsString(), cells_1));
-                void (dc.Comments.push(Comment_js_1.Comment$.create(key, comment)));
-                return dc;
-            });
-        default:
-            return undefined;
-    }
-}
-function fromFsCells(cells) {
-    let matchResult, r;
-    const activePatternResult = ActivePattern_$007CExplication$007C_$007C(cells);
-    if (activePatternResult != null) {
-        matchResult = 0;
-        r = (0, Option_js_1.value)(activePatternResult);
-    }
-    else {
-        const activePatternResult_1 = ActivePattern_$007CUnit$007C_$007C(cells);
-        if (activePatternResult_1 != null) {
-            matchResult = 0;
-            r = (0, Option_js_1.value)(activePatternResult_1);
-        }
-        else {
-            const activePatternResult_2 = ActivePattern_$007CObjectType$007C_$007C(cells);
-            if (activePatternResult_2 != null) {
-                matchResult = 0;
-                r = (0, Option_js_1.value)(activePatternResult_2);
-            }
-            else {
-                const activePatternResult_3 = ActivePattern_$007CDescription$007C_$007C(cells);
-                if (activePatternResult_3 != null) {
-                    matchResult = 0;
-                    r = (0, Option_js_1.value)(activePatternResult_3);
-                }
-                else {
-                    const activePatternResult_4 = ActivePattern_$007CGeneratedBy$007C_$007C(cells);
-                    if (activePatternResult_4 != null) {
-                        matchResult = 0;
-                        r = (0, Option_js_1.value)(activePatternResult_4);
-                    }
-                    else {
-                        const activePatternResult_5 = ActivePattern_$007CLabel$007C_$007C(cells);
-                        if (activePatternResult_5 != null) {
-                            matchResult = 0;
-                            r = (0, Option_js_1.value)(activePatternResult_5);
-                        }
-                        else {
-                            const activePatternResult_6 = ActivePattern_$007CData$007C_$007C(cells);
-                            if (activePatternResult_6 != null) {
-                                matchResult = 0;
-                                r = (0, Option_js_1.value)(activePatternResult_6);
-                            }
-                            else {
-                                const activePatternResult_7 = ActivePattern_$007CComment$007C_$007C(cells);
-                                if (activePatternResult_7 != null) {
-                                    matchResult = 0;
-                                    r = (0, Option_js_1.value)(activePatternResult_7);
-                                }
-                                else {
-                                    const activePatternResult_8 = ActivePattern_$007CFreetext$007C_$007C(cells);
-                                    if (activePatternResult_8 != null) {
-                                        matchResult = 0;
-                                        r = (0, Option_js_1.value)(activePatternResult_8);
-                                    }
-                                    else {
-                                        matchResult = 1;
-                                    }
-                                }
-                            }
-                        }
-                    }
-                }
-            }
-        }
-    }
-    switch (matchResult) {
-        case 0:
-            return (dc) => ((cells_1) => r(dc)(cells_1));
-        default: {
-            const arg = (0, String_js_1.join)(", ", (0, List_js_1.map)((c) => c.ValueAsString(), cells));
-            const clo_1 = (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse data map column: %s"))(arg);
-            return (arg_1) => {
-                const clo_2 = clo_1(arg_1);
-                return clo_2;
-            };
-        }
-    }
-}
-function toFsCells(commentKeys) {
-    return (0, Seq_js_1.toList)((0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Data"), new FsCell_fs_js_1.FsCell("Data Format"), new FsCell_fs_js_1.FsCell("Data Selector Format")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Explication"), new FsCell_fs_js_1.FsCell("Term Source REF"), new FsCell_fs_js_1.FsCell("Term Accession Number")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Unit"), new FsCell_fs_js_1.FsCell("Term Source REF"), new FsCell_fs_js_1.FsCell("Term Accession Number")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Object Type"), new FsCell_fs_js_1.FsCell("Term Source REF"), new FsCell_fs_js_1.FsCell("Term Accession Number")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Description")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Generated By")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)([new FsCell_fs_js_1.FsCell("Label")], (0, Seq_js_1.delay)(() => (0, Seq_js_1.map)((ck) => (new FsCell_fs_js_1.FsCell(`Comment [${ck}]`)), commentKeys)))))))))))))))));
-}

package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapTable.js

@@ -1,105 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.helperColumnStrings = void 0;
-exports.groupColumnsByHeader = groupColumnsByHeader;
-exports.tryDataMapTable = tryDataMapTable;
-exports.composeColumns = composeColumns;
-exports.tryFromFsWorksheet = tryFromFsWorksheet;
-exports.toFsWorksheet = toFsWorksheet;
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const ArcTable_js_1 = require("../AnnotationTable/ArcTable.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const FsWorksheet_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const DataContext_js_1 = require("../../Core/DataContext.js");
-const Range_js_1 = require("@fable-org/fable-library-js/Range.js");
-const DataMapColumn_js_1 = require("./DataMapColumn.js");
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const DataMap_js_1 = require("../../Core/DataMap.js");
-const FsRangeAddress_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeAddress.fs.js");
-const FsAddress_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/FsAddress.fs.js");
-const FsCellsCollection_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.js");
-const MapUtil_js_1 = require("@fable-org/fable-library-js/MapUtil.js");
-const FsRangeBase_fs_js_1 = require("../../fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeBase.fs.js");
-exports.helperColumnStrings = (0, List_js_1.ofArray)(["Term Source REF", "Term Accession Number", "Data Format", "Data Selector Format"]);
-function groupColumnsByHeader(columns) {
-    return (0, ArcTable_js_1.Aux_List_groupWhen)((c) => {
-        const v = c.Item(1).ValueAsString();
-        return !(0, List_js_1.exists)((s) => v.startsWith(s), exports.helperColumnStrings);
-    }, columns);
-}
-/**
- * Returns the annotation table of the worksheet if it exists, else returns None
- */
-function tryDataMapTable(sheet) {
-    return (0, Seq_js_1.tryFind)((t) => t.Name.startsWith("datamapTable"), sheet.Tables);
-}
-/**
- * Groups and parses a collection of single columns into the according ISA composite columns
- */
-function composeColumns(columns) {
-    const l = ((0, Seq_js_1.item)(0, columns).MaxRowIndex - 1) | 0;
-    const dc = Array.from((0, Seq_js_1.toArray)((0, Seq_js_1.delay)(() => (0, Seq_js_1.map)((i) => (0, DataContext_js_1.DataContext_$ctor_Z780A8A2A)(), (0, Range_js_1.rangeDouble)(0, 1, l - 1)))));
-    (0, List_js_1.iterate)((arg) => {
-        (0, DataMapColumn_js_1.setFromFsColumns)(dc, arg);
-    }, groupColumnsByHeader((0, Seq_js_1.toList)(columns)));
-    return dc;
-}
-/**
- * Returns the protocol described by the headers and a function for parsing the values of the matrix to the processes of this protocol
- */
-function tryFromFsWorksheet(sheet) {
-    try {
-        const matchValue = tryDataMapTable(sheet);
-        if (matchValue == null) {
-            return undefined;
-        }
-        else {
-            const t = (0, Option_js_1.value)(matchValue);
-            return (0, DataMap_js_1.DataMap_$ctor_4E3220A7)(composeColumns(t.GetColumns(sheet.CellCollection)));
-        }
-    }
-    catch (err) {
-        const arg = sheet.Name;
-        const arg_1 = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse datamap table with name \"%s\":\n%s"))(arg)(arg_1);
-    }
-}
-function toFsWorksheet(table) {
-    const stringCount = new Map([]);
-    const ws = new FsWorksheet_fs_js_1.FsWorksheet("isa_datamap");
-    if ((0, DataMap_js_1.DataMap__get_DataContexts)(table).length === 0) {
-        return ws;
-    }
-    else {
-        const columns = (0, DataMapColumn_js_1.toFsColumns)((0, DataMap_js_1.DataMap__get_DataContexts)(table));
-        const maxRow = (0, List_js_1.length)((0, List_js_1.head)(columns)) | 0;
-        const maxCol = (0, List_js_1.length)(columns) | 0;
-        const fsTable = ws.Table("datamapTable", (0, FsRangeAddress_fs_js_1.FsRangeAddress_$ctor_7E77A4A0)((0, FsAddress_fs_js_1.FsAddress_$ctor_Z37302880)(1, 1), (0, FsAddress_fs_js_1.FsAddress_$ctor_Z37302880)(maxRow, maxCol)));
-        (0, List_js_1.iterateIndexed)((colI, col) => {
-            (0, List_js_1.iterateIndexed)((rowI, cell) => {
-                let value;
-                const v = cell.ValueAsString();
-                if (rowI === 0) {
-                    const matchValue = (0, FsCellsCollection_fs_js_1.Dictionary_tryGet)(v, stringCount);
-                    if (matchValue == null) {
-                        (0, MapUtil_js_1.addToDict)(stringCount, cell.ValueAsString(), "");
-                        value = v;
-                    }
-                    else {
-                        const spaces = (0, Option_js_1.value)(matchValue);
-                        stringCount.set(v, spaces + " ");
-                        value = ((v + " ") + spaces);
-                    }
-                }
-                else {
-                    value = v;
-                }
-                const address = (0, FsAddress_fs_js_1.FsAddress_$ctor_Z37302880)(rowI + 1, colI + 1);
-                (0, FsRangeBase_fs_js_1.FsRangeBase__Cell_Z3407A44B)(fsTable, address, ws.CellCollection).SetValueAs(value);
-            }, col);
-        }, columns);
-        ws.RescanRows();
-        return ws;
-    }
-}