@nfdi4plants/arctrl 2.0.0-alpha.7 → 2.0.0-alpha.8

package/Json/Process/FactorValue.js

@@ -1,4 +1,4 @@
-import { decoder as decoder_1, encoder } from "./PropertyValue.js";
+import { genID, decoder as decoder_1, encoder } from "./PropertyValue.js";
 import { FactorValue, FactorValue_createAsPV } from "../../Core/Process/FactorValue.js";
 import { ofArray, choose } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { equals } from "../../fable_modules/fable-library-js.4.16.0/Util.js";
@@ -7,19 +7,24 @@ import { defaultSpaces, tryInclude } from "../Encode.js";
 import { Factor_ISAJson_decoder, Factor_ISAJson_encoder } from "./Factor.js";
 import { Value_ISAJson_decoder, Value_ISAJson_encoder } from "./Value.js";
 import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from "../OntologyAnnotation.js";
+import { encode } from "../IDTable.js";
 import { object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { Decode_uri } from "../Decode.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export const FactorValue_ROCrate_encoder = encoder;
 
 export const FactorValue_ROCrate_decoder = decoder_1(FactorValue_createAsPV);
 
-export function FactorValue_ISAJson_encoder(fv) {
-    return new Json(5, [choose((tupledArg) => {
+export function FactorValue_ISAJson_genID(fv) {
+    return genID(fv);
+}
+
+export function FactorValue_ISAJson_encoder(idMap, fv) {
+    const f = (fv_1) => (new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
             return void 0;
@@ -27,7 +32,13 @@ export function FactorValue_ISAJson_encoder(fv) {
         else {
             return [tupledArg[0], v];
         }
-    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), fv.ID), tryInclude("category", Factor_ISAJson_encoder, fv.Category), tryInclude("value", Value_ISAJson_encoder, fv.Value), tryInclude("unit", OntologyAnnotation_ISAJson_encoder, fv.Unit)]))]);
+    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), FactorValue_ISAJson_genID(fv_1)), tryInclude("category", (value_2) => Factor_ISAJson_encoder(idMap, value_2), fv_1.Category), tryInclude("value", (value_3) => Value_ISAJson_encoder(idMap, value_3), fv_1.Value), tryInclude("unit", (oa) => OntologyAnnotation_ISAJson_encoder(idMap, oa), fv_1.Unit)]))]));
+    if (idMap != null) {
+        return encode(FactorValue_ISAJson_genID, f, fv, idMap);
+    }
+    else {
+        return f(fv);
+    }
 }
 
 export const FactorValue_ISAJson_decoder = object((get$) => {
@@ -45,14 +56,15 @@ export function ARCtrl_Process_FactorValue__FactorValue_fromISAJsonString_Static
     }
 }
 
-export function ARCtrl_Process_FactorValue__FactorValue_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_FactorValue__FactorValue_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = FactorValue_ISAJson_encoder(f);
+        const value = FactorValue_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_FactorValue__FactorValue_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_FactorValue__FactorValue_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_FactorValue__FactorValue_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_FactorValue__FactorValue_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 

package/Json/Process/Material.js

@@ -10,9 +10,10 @@ import { context_jsonvalue } from "../context/rocrate/isa_material_context.js";
 import { list as list_2, string, object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { Decode_objectNoAdditionalProperties, Decode_uri } from "../Decode.js";
 import { Material } from "../../Core/Process/Material.js";
+import { encode } from "../IDTable.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export function Material_ROCrate_genID(m) {
     const matchValue = m.ID;
@@ -50,8 +51,8 @@ export const Material_ROCrate_decoder = (() => {
     return decode();
 })();
 
-export function Material_ISAJson_encoder(oa) {
-    return new Json(5, [choose((tupledArg) => {
+export function Material_ISAJson_encoder(idMap, c) {
+    const f = (oa) => (new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
             return void 0;
@@ -59,7 +60,13 @@ export function Material_ISAJson_encoder(oa) {
         else {
             return [tupledArg[0], v];
         }
-    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), oa.ID), tryInclude("name", (value_2) => (new Json(0, [value_2])), oa.Name), tryInclude("type", MaterialType_ISAJson_encoder, oa.MaterialType), tryIncludeListOpt("characteristics", MaterialAttributeValue_ISAJson_encoder, oa.Characteristics), tryIncludeListOpt("derivesFrom", Material_ISAJson_encoder, oa.DerivesFrom)]))]);
+    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), Material_ROCrate_genID(oa)), tryInclude("name", (value_2) => (new Json(0, [value_2])), oa.Name), tryInclude("type", MaterialType_ISAJson_encoder, oa.MaterialType), tryIncludeListOpt("characteristics", (oa_1) => MaterialAttributeValue_ISAJson_encoder(idMap, oa_1), oa.Characteristics), tryIncludeListOpt("derivesFrom", (c_1) => Material_ISAJson_encoder(idMap, c_1), oa.DerivesFrom)]))]));
+    if (idMap != null) {
+        return encode(Material_ROCrate_genID, f, c, idMap);
+    }
+    else {
+        return f(c);
+    }
 }
 
 export const Material_ISAJson_allowedFields = ofArray(["@id", "@type", "name", "type", "characteristics", "derivesFrom", "@context"]);
@@ -82,15 +89,16 @@ export function ARCtrl_Process_Material__Material_fromISAJsonString_Static_Z721C
     }
 }
 
-export function ARCtrl_Process_Material__Material_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_Material__Material_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = Material_ISAJson_encoder(f);
+        const value = Material_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_Material__Material_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_Material__Material_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_Material__Material_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_Material__Material_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 
 export function ARCtrl_Process_Material__Material_fromROCrateJsonString_Static_Z721C83C5(s) {

package/Json/Process/MaterialAttribute.js

@@ -1,17 +1,28 @@
-import { singleton, choose } from "../../fable_modules/fable-library-js.4.16.0/List.js";
+import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ROCrate_genID } from "../OntologyAnnotation.js";
+import { ofArray, choose } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { equals } from "../../fable_modules/fable-library-js.4.16.0/Util.js";
 import { Json } from "../../fable_modules/Thoth.Json.Core.0.2.1/Types.fs.js";
 import { defaultSpaces, tryInclude } from "../Encode.js";
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from "../OntologyAnnotation.js";
+import { encode } from "../IDTable.js";
 import { object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { MaterialAttribute } from "../../Core/Process/MaterialAttribute.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
-export function MaterialAttribute_ISAJson_encoder(value) {
-    return new Json(5, [choose((tupledArg) => {
+export function MaterialAttribute_ISAJson_genID(m) {
+    const matchValue = m.CharacteristicType;
+    if (matchValue == null) {
+        return "#EmptyFactor";
+    }
+    else {
+        return `#MaterialAttribute/${OntologyAnnotation_ROCrate_genID(matchValue)}`;
+    }
+}
+
+export function MaterialAttribute_ISAJson_encoder(idMap, value) {
+    const f = (value_1) => (new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
             return void 0;
@@ -19,7 +30,13 @@ export function MaterialAttribute_ISAJson_encoder(value) {
         else {
             return [tupledArg[0], v];
         }
-    }, singleton(tryInclude("characteristicType", OntologyAnnotation_ISAJson_encoder, value.CharacteristicType)))]);
+    }, ofArray([tryInclude("@id", (value_2) => (new Json(0, [value_2])), MaterialAttribute_ISAJson_genID(value_1)), tryInclude("characteristicType", (oa) => OntologyAnnotation_ISAJson_encoder(idMap, oa), value_1.CharacteristicType)]))]));
+    if (idMap != null) {
+        return encode(MaterialAttribute_ISAJson_genID, f, value, idMap);
+    }
+    else {
+        return f(value);
+    }
 }
 
 export const MaterialAttribute_ISAJson_decoder = object((get$) => {
@@ -37,14 +54,15 @@ export function ARCtrl_Process_MaterialAttribute__MaterialAttribute_fromISAJsonS
     }
 }
 
-export function ARCtrl_Process_MaterialAttribute__MaterialAttribute_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_MaterialAttribute__MaterialAttribute_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (v) => {
-        const value = MaterialAttribute_ISAJson_encoder(v);
+        const value = MaterialAttribute_ISAJson_encoder(idMap, v);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_MaterialAttribute__MaterialAttribute_ToJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_MaterialAttribute__MaterialAttribute_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_MaterialAttribute__MaterialAttribute_ToJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_MaterialAttribute__MaterialAttribute_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 

package/Json/Process/MaterialAttributeValue.js

@@ -1,4 +1,4 @@
-import { decoder as decoder_1, encoder } from "./PropertyValue.js";
+import { genID, decoder as decoder_1, encoder } from "./PropertyValue.js";
 import { MaterialAttributeValue, MaterialAttributeValue_createAsPV } from "../../Core/Process/MaterialAttributeValue.js";
 import { ofArray, choose } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { equals } from "../../fable_modules/fable-library-js.4.16.0/Util.js";
@@ -7,19 +7,24 @@ import { defaultSpaces, tryInclude } from "../Encode.js";
 import { MaterialAttribute_ISAJson_decoder, MaterialAttribute_ISAJson_encoder } from "./MaterialAttribute.js";
 import { Value_ISAJson_decoder, Value_ISAJson_encoder } from "./Value.js";
 import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from "../OntologyAnnotation.js";
+import { encode } from "../IDTable.js";
 import { object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { Decode_uri } from "../Decode.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export const MaterialAttributeValue_ROCrate_encoder = encoder;
 
 export const MaterialAttributeValue_ROCrate_decoder = decoder_1(MaterialAttributeValue_createAsPV);
 
-export function MaterialAttributeValue_ISAJson_encoder(oa) {
-    return new Json(5, [choose((tupledArg) => {
+export function MaterialAttributeValue_ISAJson_genID(oa) {
+    return genID(oa);
+}
+
+export function MaterialAttributeValue_ISAJson_encoder(idMap, oa) {
+    const f = (oa_1) => (new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
             return void 0;
@@ -27,7 +32,13 @@ export function MaterialAttributeValue_ISAJson_encoder(oa) {
         else {
             return [tupledArg[0], v];
         }
-    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), oa.ID), tryInclude("category", MaterialAttribute_ISAJson_encoder, oa.Category), tryInclude("value", Value_ISAJson_encoder, oa.Value), tryInclude("unit", OntologyAnnotation_ISAJson_encoder, oa.Unit)]))]);
+    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), MaterialAttributeValue_ISAJson_genID(oa_1)), tryInclude("category", (value_2) => MaterialAttribute_ISAJson_encoder(idMap, value_2), oa_1.Category), tryInclude("value", (value_3) => Value_ISAJson_encoder(idMap, value_3), oa_1.Value), tryInclude("unit", (oa_3) => OntologyAnnotation_ISAJson_encoder(idMap, oa_3), oa_1.Unit)]))]));
+    if (idMap != null) {
+        return encode(MaterialAttributeValue_ISAJson_genID, f, oa, idMap);
+    }
+    else {
+        return f(oa);
+    }
 }
 
 export const MaterialAttributeValue_ISAJson_decoder = object((get$) => {
@@ -45,15 +56,16 @@ export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_fr
     }
 }
 
-export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = MaterialAttributeValue_ISAJson_encoder(f);
+        const value = MaterialAttributeValue_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 
 export function ARCtrl_Process_MaterialAttributeValue__MaterialAttributeValue_fromROCrateJsonString_Static_Z721C83C5(s) {

package/Json/Process/Process.js

@@ -15,9 +15,10 @@ import { context_jsonvalue } from "../context/rocrate/isa_process_context.js";
 import { list as list_2, string, object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { Decode_uri } from "../Decode.js";
 import { Process } from "../../Core/Process/Process.js";
+import { encode } from "../IDTable.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export function Process_ROCrate_genID(p) {
     const matchValue = p.ID;
@@ -52,8 +53,8 @@ export const Process_ROCrate_decoder = object((get$) => {
     return new Process((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("executesProtocol", Protocol_ROCrate_decoder)), (arg_7 = list_2(ProcessParameterValue_ROCrate_decoder), (objectArg_3 = get$.Optional, objectArg_3.Field("parameterValues", arg_7))), (objectArg_4 = get$.Optional, objectArg_4.Field("performer", Person_ROCrate_decodeAuthorListString)), (objectArg_5 = get$.Optional, objectArg_5.Field("date", string)), void 0, void 0, (arg_13 = list_2(ProcessInput_ROCrate_decoder), (objectArg_6 = get$.Optional, objectArg_6.Field("inputs", arg_13))), (arg_15 = list_2(ProcessOutput_ROCrate_decoder), (objectArg_7 = get$.Optional, objectArg_7.Field("outputs", arg_15))), (arg_17 = list_2(Comment_ROCrate_decoder), (objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_17))));
 });
 
-export function Process_ISAJson_encoder(oa) {
-    return new Json(5, [choose((tupledArg) => {
+export function Process_ISAJson_encoder(studyName, assayName, idMap, oa) {
+    const f = (oa_1) => (new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
             return void 0;
@@ -61,7 +62,13 @@ export function Process_ISAJson_encoder(oa) {
         else {
             return [tupledArg[0], v];
         }
-    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), oa.ID), tryInclude("name", (value_2) => (new Json(0, [value_2])), oa.Name), tryInclude("executesProtocol", Protocol_ISAJson_encoder, oa.ExecutesProtocol), tryIncludeListOpt("parameterValues", ProcessParameterValue_ISAJson_encoder, oa.ParameterValues), tryInclude("performer", (value_4) => (new Json(0, [value_4])), oa.Performer), tryInclude("date", (value_6) => (new Json(0, [value_6])), oa.Date), tryInclude("previousProcess", Process_ISAJson_encoder, oa.PreviousProcess), tryInclude("nextProcess", Process_ISAJson_encoder, oa.NextProcess), tryIncludeListOpt("inputs", ProcessInput_ISAJson_encoder, oa.Inputs), tryIncludeListOpt("outputs", ProcessOutput_ISAJson_encoder, oa.Outputs), tryIncludeListOpt("comments", Comment_ISAJson_encoder, oa.Comments)]))]);
+    }, ofArray([tryInclude("@id", (value) => (new Json(0, [value])), Process_ROCrate_genID(oa_1)), tryInclude("name", (value_2) => (new Json(0, [value_2])), oa_1.Name), tryInclude("executesProtocol", (oa_2) => Protocol_ISAJson_encoder(studyName, assayName, oa_1.Name, idMap, oa_2), oa_1.ExecutesProtocol), tryIncludeListOpt("parameterValues", (oa_3) => ProcessParameterValue_ISAJson_encoder(idMap, oa_3), oa_1.ParameterValues), tryInclude("performer", (value_4) => (new Json(0, [value_4])), oa_1.Performer), tryInclude("date", (value_6) => (new Json(0, [value_6])), oa_1.Date), tryInclude("previousProcess", (oa_4) => Process_ISAJson_encoder(studyName, assayName, idMap, oa_4), oa_1.PreviousProcess), tryInclude("nextProcess", (oa_5) => Process_ISAJson_encoder(studyName, assayName, idMap, oa_5), oa_1.NextProcess), tryIncludeListOpt("inputs", (value_8) => ProcessInput_ISAJson_encoder(idMap, value_8), oa_1.Inputs), tryIncludeListOpt("outputs", (value_9) => ProcessOutput_ISAJson_encoder(idMap, value_9), oa_1.Outputs), tryIncludeListOpt("comments", (comment) => Comment_ISAJson_encoder(idMap, comment), oa_1.Comments)]))]));
+    if (idMap != null) {
+        return encode(Process_ROCrate_genID, f, oa, idMap);
+    }
+    else {
+        return f(oa);
+    }
 }
 
 export const Process_ISAJson_decoder = (() => {
@@ -82,15 +89,16 @@ export function ARCtrl_Process_Process__Process_fromISAJsonString_Static_Z721C83
     }
 }
 
-export function ARCtrl_Process_Process__Process_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_Process__Process_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = Process_ISAJson_encoder(f);
+        const value = Process_ISAJson_encoder(void 0, void 0, idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_Process__Process_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_Process__Process_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_Process__Process_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_Process__Process_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 
 export function ARCtrl_Process_Process__Process_fromROCrateString_Static_Z721C83C5(s) {

package/Json/Process/ProcessInput.js

@@ -7,9 +7,9 @@ import { ProcessInput } from "../../Core/Process/ProcessInput.js";
 import { ofArray } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
 import { defaultSpaces } from "../Encode.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export function ProcessInput_ROCrate_encoder(value) {
     switch (value.tag) {
@@ -26,16 +26,16 @@ export function ProcessInput_ROCrate_encoder(value) {
 
 export const ProcessInput_ROCrate_decoder = oneOf(ofArray([map((Item) => (new ProcessInput(0, [Item])), Source_ROCrate_decoder), map((Item_1) => (new ProcessInput(1, [Item_1])), Sample_ROCrate_decoder), map((Item_2) => (new ProcessInput(2, [Item_2])), Data_ROCrate_decoder), map((Item_3) => (new ProcessInput(3, [Item_3])), Material_ROCrate_decoder)]));
 
-export function ProcessInput_ISAJson_encoder(value) {
+export function ProcessInput_ISAJson_encoder(idMap, value) {
     switch (value.tag) {
         case 1:
-            return Sample_ISAJson_encoder(value.fields[0]);
+            return Sample_ISAJson_encoder(idMap, value.fields[0]);
         case 2:
-            return Data_ISAJson_encoder(value.fields[0]);
+            return Data_ISAJson_encoder(idMap, value.fields[0]);
         case 3:
-            return Material_ISAJson_encoder(value.fields[0]);
+            return Material_ISAJson_encoder(idMap, value.fields[0]);
         default:
-            return Source_ISAJson_encoder(value.fields[0]);
+            return Source_ISAJson_encoder(idMap, value.fields[0]);
     }
 }
 
@@ -51,14 +51,15 @@ export function ARCtrl_Process_ProcessInput__ProcessInput_fromISAJsonString_Stat
     }
 }
 
-export function ARCtrl_Process_ProcessInput__ProcessInput_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_ProcessInput__ProcessInput_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = ProcessInput_ISAJson_encoder(f);
+        const value = ProcessInput_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_ProcessInput__ProcessInput_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_ProcessInput__ProcessInput_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_ProcessInput__ProcessInput_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_ProcessInput__ProcessInput_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 

package/Json/Process/ProcessOutput.js

@@ -6,9 +6,9 @@ import { ProcessOutput } from "../../Core/Process/ProcessOutput.js";
 import { ofArray } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
 import { defaultSpaces } from "../Encode.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export function ProcessOutput_ROCrate_encoder(value) {
     switch (value.tag) {
@@ -23,14 +23,14 @@ export function ProcessOutput_ROCrate_encoder(value) {
 
 export const ProcessOutput_ROCrate_decoder = oneOf(ofArray([map((Item) => (new ProcessOutput(0, [Item])), Sample_ROCrate_decoder), map((Item_1) => (new ProcessOutput(1, [Item_1])), Data_ROCrate_decoder), map((Item_2) => (new ProcessOutput(2, [Item_2])), Material_ROCrate_decoder)]));
 
-export function ProcessOutput_ISAJson_encoder(value) {
+export function ProcessOutput_ISAJson_encoder(idMap, value) {
     switch (value.tag) {
         case 1:
-            return Data_ISAJson_encoder(value.fields[0]);
+            return Data_ISAJson_encoder(idMap, value.fields[0]);
         case 2:
-            return Material_ISAJson_encoder(value.fields[0]);
+            return Material_ISAJson_encoder(idMap, value.fields[0]);
         default:
-            return Sample_ISAJson_encoder(value.fields[0]);
+            return Sample_ISAJson_encoder(idMap, value.fields[0]);
     }
 }
 
@@ -46,15 +46,16 @@ export function ARCtrl_Process_ProcessOutput__ProcessOutput_fromISAJsonString_St
     }
 }
 
-export function ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = ProcessOutput_ISAJson_encoder(f);
+        const value = ProcessOutput_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_ProcessOutput__ProcessOutput_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 
 export function ARCtrl_Process_ProcessOutput__ProcessOutput_fromROCrateJsonString_Static_Z721C83C5(s) {

package/Json/Process/ProcessParameterValue.js

@@ -10,14 +10,18 @@ import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder
 import { object } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
-import { unwrap } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 
 export const ProcessParameterValue_ROCrate_encoder = encoder;
 
 export const ProcessParameterValue_ROCrate_decoder = decoder_1((category, value, unit) => ProcessParameterValue.createAsPV(category, value, unit));
 
-export function ProcessParameterValue_ISAJson_encoder(oa) {
+export function ProcessParameterValue_ISAJson_genID(oa) {
+    throw new Error("Not implemented");
+}
+
+export function ProcessParameterValue_ISAJson_encoder(idMap, oa) {
     return new Json(5, [choose((tupledArg) => {
         const v = tupledArg[1];
         if (equals(v, new Json(3, []))) {
@@ -26,7 +30,7 @@ export function ProcessParameterValue_ISAJson_encoder(oa) {
         else {
             return [tupledArg[0], v];
         }
-    }, ofArray([tryInclude("category", ProtocolParameter_ISAJson_encoder, oa.Category), tryInclude("value", Value_ISAJson_encoder, oa.Value), tryInclude("unit", OntologyAnnotation_ISAJson_encoder, oa.Unit)]))]);
+    }, ofArray([tryInclude("category", (value) => ProtocolParameter_ISAJson_encoder(idMap, value), oa.Category), tryInclude("value", (value_1) => Value_ISAJson_encoder(idMap, value_1), oa.Value), tryInclude("unit", (oa_1) => OntologyAnnotation_ISAJson_encoder(idMap, oa_1), oa.Unit)]))]);
 }
 
 export const ProcessParameterValue_ISAJson_decoder = object((get$) => {
@@ -44,15 +48,16 @@ export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_from
     }
 }
 
-export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_toISAJsonString_Static_71136F3F(spaces) {
+export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = ProcessParameterValue_ISAJson_encoder(f);
+        const value = ProcessParameterValue_ISAJson_encoder(idMap, f);
         return toString(defaultSpaces(spaces), value);
     };
 }
 
-export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_ToISAJsonString_71136F3F(this$, spaces) {
-    return ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_toISAJsonString_Static_71136F3F(unwrap(spaces))(this$);
+export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
+    return ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
 }
 
 export function ARCtrl_Process_ProcessParameterValue__ProcessParameterValue_fromROCrateJsonString_Static_Z721C83C5(s) {

package/Json/Process/ProcessSequence.js

@@ -3,6 +3,7 @@ import { fromString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Deco
 import { list as list_1 } from "../../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
 import { Process_ROCrate_encoder, Process_ROCrate_decoder, Process_ISAJson_encoder, Process_ISAJson_decoder } from "./Process.js";
 import { printf, toText } from "../../fable_modules/fable-library-js.4.16.0/String.js";
+import { defaultArg } from "../../fable_modules/fable-library-js.4.16.0/Option.js";
 import { list as list_2 } from "../../fable_modules/Thoth.Json.Core.0.2.1/Encode.fs.js";
 import { map } from "../../fable_modules/fable-library-js.4.16.0/List.js";
 import { toString } from "../../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
@@ -27,9 +28,10 @@ export function ProcessSequence_fromISAJsonString_Z721C83C5(s) {
     }
 }
 
-export function ProcessSequence_toISAJsonString_71136F3F(spaces) {
+export function ProcessSequence_toISAJsonString_Z3B036AA(spaces, useIDReferencing) {
+    const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
     return (f) => {
-        const value = list_2(map(Process_ISAJson_encoder, f));
+        const value = list_2(map((oa) => Process_ISAJson_encoder(void 0, void 0, idMap, oa), f));
         return toString(defaultSpaces(spaces), value);
     };
 }

package/Json/Process/PropertyValue.js

@@ -11,12 +11,37 @@ import { Value } from "../../Core/Process/Value.js";
 
 export function genID(p) {
     const matchValue = p.GetCategory();
-    if (matchValue == null) {
-        return `#Empty${p.GetAdditionalType()}`;
+    const matchValue_1 = p.GetValue();
+    const matchValue_2 = p.GetUnit();
+    let matchResult, t, u, v, t_1, v_1;
+    if (matchValue != null) {
+        if (matchValue_1 != null) {
+            if (matchValue_2 == null) {
+                matchResult = 1;
+                t_1 = matchValue;
+                v_1 = matchValue_1;
+            }
+            else {
+                matchResult = 0;
+                t = matchValue;
+                u = matchValue_2;
+                v = matchValue_1;
+            }
+        }
+        else {
+            matchResult = 2;
+        }
     }
     else {
-        const t = matchValue;
-        return `${p.GetAdditionalType()}/${t}${p.GetValue()}${p.GetUnit()}`;
+        matchResult = 2;
+    }
+    switch (matchResult) {
+        case 0:
+            return `#${p.GetAdditionalType()}/${t.NameText}=${v.Text}${u.NameText}`;
+        case 1:
+            return `#${p.GetAdditionalType()}/${t_1.NameText}=${v_1.Text}`;
+        default:
+            return `#Empty${p.GetAdditionalType()}`;
     }
 }