@nfdi4plants/arctrl 1.0.6 → 1.1.0

package/ISA/ISA/ArcTypes/ArcTypes.js

@@ -33,6 +33,7 @@ export class ArcAssay extends ArcTables {
         this["technologyPlatform@100"] = technologyPlatform;
         this["performers@101-1"] = performers_1;
         this["comments@102-1"] = comments_1;
+        this.staticHash = 0;
     }
     get Identifier() {
         const this$ = this;
@@ -90,6 +91,14 @@ export class ArcAssay extends ArcTables {
         const this$ = this;
         this$["comments@102-1"] = n;
     }
+    get StaticHash() {
+        const this$ = this;
+        return this$.staticHash | 0;
+    }
+    set StaticHash(h) {
+        const this$ = this;
+        this$.staticHash = (h | 0);
+    }
     static init(identifier) {
         return new ArcAssay(identifier);
     }
@@ -561,26 +570,27 @@ export class ArcStudy extends ArcTables {
         const registeredAssayIdentifiers_1 = defaultArg(registeredAssayIdentifiers, []);
         const factors_1 = defaultArg(factors, []);
         const comments_1 = defaultArg(comments, []);
-        this["identifier@570"] = identifier;
+        this["identifier@572"] = identifier;
         this.investigation = void 0;
-        this["title@572"] = title;
-        this["description@573"] = description;
-        this["submissionDate@574"] = submissionDate;
-        this["publicReleaseDate@575"] = publicReleaseDate;
-        this["publications@576-1"] = publications_1;
-        this["contacts@577-1"] = contacts_1;
-        this["studyDesignDescriptors@578-1"] = studyDesignDescriptors_1;
-        this["registeredAssayIdentifiers@579-1"] = registeredAssayIdentifiers_1;
-        this["factors@580-1"] = factors_1;
-        this["comments@581-1"] = comments_1;
+        this["title@574"] = title;
+        this["description@575"] = description;
+        this["submissionDate@576"] = submissionDate;
+        this["publicReleaseDate@577"] = publicReleaseDate;
+        this["publications@578-1"] = publications_1;
+        this["contacts@579-1"] = contacts_1;
+        this["studyDesignDescriptors@580-1"] = studyDesignDescriptors_1;
+        this["registeredAssayIdentifiers@581-1"] = registeredAssayIdentifiers_1;
+        this["factors@582-1"] = factors_1;
+        this["comments@583-1"] = comments_1;
+        this.staticHash = 0;
     }
     get Identifier() {
         const this$ = this;
-        return this$["identifier@570"];
+        return this$["identifier@572"];
     }
     set Identifier(i) {
         const this$ = this;
-        this$["identifier@570"] = i;
+        this$["identifier@572"] = i;
     }
     get Investigation() {
         const this$ = this;
@@ -592,83 +602,91 @@ export class ArcStudy extends ArcTables {
     }
     get Title() {
         const this$ = this;
-        return unwrap(this$["title@572"]);
+        return unwrap(this$["title@574"]);
     }
     set Title(n) {
         const this$ = this;
-        this$["title@572"] = n;
+        this$["title@574"] = n;
     }
     get Description() {
         const this$ = this;
-        return unwrap(this$["description@573"]);
+        return unwrap(this$["description@575"]);
     }
     set Description(n) {
         const this$ = this;
-        this$["description@573"] = n;
+        this$["description@575"] = n;
     }
     get SubmissionDate() {
         const this$ = this;
-        return unwrap(this$["submissionDate@574"]);
+        return unwrap(this$["submissionDate@576"]);
     }
     set SubmissionDate(n) {
         const this$ = this;
-        this$["submissionDate@574"] = n;
+        this$["submissionDate@576"] = n;
     }
     get PublicReleaseDate() {
         const this$ = this;
-        return unwrap(this$["publicReleaseDate@575"]);
+        return unwrap(this$["publicReleaseDate@577"]);
     }
     set PublicReleaseDate(n) {
         const this$ = this;
-        this$["publicReleaseDate@575"] = n;
+        this$["publicReleaseDate@577"] = n;
     }
     get Publications() {
         const this$ = this;
-        return this$["publications@576-1"];
+        return this$["publications@578-1"];
     }
     set Publications(n) {
         const this$ = this;
-        this$["publications@576-1"] = n;
+        this$["publications@578-1"] = n;
     }
     get Contacts() {
         const this$ = this;
-        return this$["contacts@577-1"];
+        return this$["contacts@579-1"];
     }
     set Contacts(n) {
         const this$ = this;
-        this$["contacts@577-1"] = n;
+        this$["contacts@579-1"] = n;
     }
     get StudyDesignDescriptors() {
         const this$ = this;
-        return this$["studyDesignDescriptors@578-1"];
+        return this$["studyDesignDescriptors@580-1"];
     }
     set StudyDesignDescriptors(n) {
         const this$ = this;
-        this$["studyDesignDescriptors@578-1"] = n;
+        this$["studyDesignDescriptors@580-1"] = n;
     }
     get RegisteredAssayIdentifiers() {
         const this$ = this;
-        return this$["registeredAssayIdentifiers@579-1"];
+        return this$["registeredAssayIdentifiers@581-1"];
     }
     set RegisteredAssayIdentifiers(n) {
         const this$ = this;
-        this$["registeredAssayIdentifiers@579-1"] = n;
+        this$["registeredAssayIdentifiers@581-1"] = n;
     }
     get Factors() {
         const this$ = this;
-        return this$["factors@580-1"];
+        return this$["factors@582-1"];
     }
     set Factors(n) {
         const this$ = this;
-        this$["factors@580-1"] = n;
+        this$["factors@582-1"] = n;
     }
     get Comments() {
         const this$ = this;
-        return this$["comments@581-1"];
+        return this$["comments@583-1"];
     }
     set Comments(n) {
         const this$ = this;
-        this$["comments@581-1"] = n;
+        this$["comments@583-1"] = n;
+    }
+    get StaticHash() {
+        const this$ = this;
+        return this$.staticHash | 0;
+    }
+    set StaticHash(h) {
+        const this$ = this;
+        this$.staticHash = (h | 0);
     }
     static init(identifier) {
         return new ArcStudy(identifier);
@@ -1223,6 +1241,10 @@ export class ArcStudy extends ArcTables {
         const this$ = this;
         return HashCodes_boxHashArray([this$.Identifier, HashCodes_boxHashOption(this$.Title), HashCodes_boxHashOption(this$.Description), HashCodes_boxHashOption(this$.SubmissionDate), HashCodes_boxHashOption(this$.PublicReleaseDate), HashCodes_boxHashArray(this$.Publications), HashCodes_boxHashArray(this$.Contacts), HashCodes_boxHashArray(this$.StudyDesignDescriptors), HashCodes_boxHashArray(Array.from(this$.Tables)), HashCodes_boxHashArray(Array.from(this$.RegisteredAssayIdentifiers)), HashCodes_boxHashArray(this$.Factors), HashCodes_boxHashArray(this$.Comments)]) | 0;
     }
+    GetLightHashCode() {
+        const this$ = this;
+        return HashCodes_boxHashArray([this$.Identifier, HashCodes_boxHashOption(this$.Title), HashCodes_boxHashOption(this$.Description), HashCodes_boxHashOption(this$.SubmissionDate), HashCodes_boxHashOption(this$.PublicReleaseDate), HashCodes_boxHashArray(this$.Publications), HashCodes_boxHashArray(this$.Contacts), HashCodes_boxHashArray(this$.StudyDesignDescriptors), HashCodes_boxHashArray(Array.from(this$.Tables)), HashCodes_boxHashArray(this$.Factors), HashCodes_boxHashArray(this$.Comments)]) | 0;
+    }
 }
 
 export function ArcStudy_$reflection() {
@@ -1269,124 +1291,133 @@ export class ArcInvestigation {
         const registeredStudyIdentifiers_1 = defaultArg(registeredStudyIdentifiers, []);
         const comments_1 = defaultArg(comments, []);
         const remarks_1 = defaultArg(remarks, []);
-        this["identifier@1173"] = identifier;
-        this["title@1174"] = title;
-        this["description@1175"] = description;
-        this["submissionDate@1176"] = submissionDate;
-        this["publicReleaseDate@1177"] = publicReleaseDate;
-        this["ontologySourceReferences@1178-1"] = ontologySourceReferences_1;
-        this["publications@1179-1"] = publications_1;
-        this["contacts@1180-1"] = contacts_1;
-        this["assays@1181-1"] = assays_1;
-        this["studies@1182-1"] = studies_1;
-        this["registeredStudyIdentifiers@1183-1"] = registeredStudyIdentifiers_1;
-        this["comments@1184-1"] = comments_1;
-        this["remarks@1185-1"] = remarks_1;
-        this["init@1154"] = 1;
+        this["identifier@1195"] = identifier;
+        this["title@1196"] = title;
+        this["description@1197"] = description;
+        this["submissionDate@1198"] = submissionDate;
+        this["publicReleaseDate@1199"] = publicReleaseDate;
+        this["ontologySourceReferences@1200-1"] = ontologySourceReferences_1;
+        this["publications@1201-1"] = publications_1;
+        this["contacts@1202-1"] = contacts_1;
+        this["assays@1203-1"] = assays_1;
+        this["studies@1204-1"] = studies_1;
+        this["registeredStudyIdentifiers@1205-1"] = registeredStudyIdentifiers_1;
+        this["comments@1206-1"] = comments_1;
+        this["remarks@1207-1"] = remarks_1;
+        this.staticHash = 0;
+        this["init@1176"] = 1;
     }
     get Identifier() {
         const this$ = this;
-        return this$["identifier@1173"];
+        return this$["identifier@1195"];
     }
     set Identifier(i) {
         const this$ = this;
-        this$["identifier@1173"] = i;
+        this$["identifier@1195"] = i;
     }
     get Title() {
         const this$ = this;
-        return unwrap(this$["title@1174"]);
+        return unwrap(this$["title@1196"]);
     }
     set Title(n) {
         const this$ = this;
-        this$["title@1174"] = n;
+        this$["title@1196"] = n;
     }
     get Description() {
         const this$ = this;
-        return unwrap(this$["description@1175"]);
+        return unwrap(this$["description@1197"]);
     }
     set Description(n) {
         const this$ = this;
-        this$["description@1175"] = n;
+        this$["description@1197"] = n;
     }
     get SubmissionDate() {
         const this$ = this;
-        return unwrap(this$["submissionDate@1176"]);
+        return unwrap(this$["submissionDate@1198"]);
     }
     set SubmissionDate(n) {
         const this$ = this;
-        this$["submissionDate@1176"] = n;
+        this$["submissionDate@1198"] = n;
     }
     get PublicReleaseDate() {
         const this$ = this;
-        return unwrap(this$["publicReleaseDate@1177"]);
+        return unwrap(this$["publicReleaseDate@1199"]);
     }
     set PublicReleaseDate(n) {
         const this$ = this;
-        this$["publicReleaseDate@1177"] = n;
+        this$["publicReleaseDate@1199"] = n;
     }
     get OntologySourceReferences() {
         const this$ = this;
-        return this$["ontologySourceReferences@1178-1"];
+        return this$["ontologySourceReferences@1200-1"];
     }
     set OntologySourceReferences(n) {
         const this$ = this;
-        this$["ontologySourceReferences@1178-1"] = n;
+        this$["ontologySourceReferences@1200-1"] = n;
     }
     get Publications() {
         const this$ = this;
-        return this$["publications@1179-1"];
+        return this$["publications@1201-1"];
     }
     set Publications(n) {
         const this$ = this;
-        this$["publications@1179-1"] = n;
+        this$["publications@1201-1"] = n;
     }
     get Contacts() {
         const this$ = this;
-        return this$["contacts@1180-1"];
+        return this$["contacts@1202-1"];
     }
     set Contacts(n) {
         const this$ = this;
-        this$["contacts@1180-1"] = n;
+        this$["contacts@1202-1"] = n;
     }
     get Assays() {
         const this$ = this;
-        return this$["assays@1181-1"];
+        return this$["assays@1203-1"];
     }
     set Assays(n) {
         const this$ = this;
-        this$["assays@1181-1"] = n;
+        this$["assays@1203-1"] = n;
     }
     get Studies() {
         const this$ = this;
-        return this$["studies@1182-1"];
+        return this$["studies@1204-1"];
     }
     set Studies(n) {
         const this$ = this;
-        this$["studies@1182-1"] = n;
+        this$["studies@1204-1"] = n;
     }
     get RegisteredStudyIdentifiers() {
         const this$ = this;
-        return this$["registeredStudyIdentifiers@1183-1"];
+        return this$["registeredStudyIdentifiers@1205-1"];
     }
     set RegisteredStudyIdentifiers(n) {
         const this$ = this;
-        this$["registeredStudyIdentifiers@1183-1"] = n;
+        this$["registeredStudyIdentifiers@1205-1"] = n;
     }
     get Comments() {
         const this$ = this;
-        return this$["comments@1184-1"];
+        return this$["comments@1206-1"];
     }
     set Comments(n) {
         const this$ = this;
-        this$["comments@1184-1"] = n;
+        this$["comments@1206-1"] = n;
     }
     get Remarks() {
         const this$ = this;
-        return this$["remarks@1185-1"];
+        return this$["remarks@1207-1"];
     }
     set Remarks(n) {
         const this$ = this;
-        this$["remarks@1185-1"] = n;
+        this$["remarks@1207-1"] = n;
+    }
+    get StaticHash() {
+        const this$ = this;
+        return this$.staticHash | 0;
+    }
+    set StaticHash(h) {
+        const this$ = this;
+        this$.staticHash = (h | 0);
     }
     static get FileName() {
         return "isa.investigation.xlsx";
@@ -2135,6 +2166,10 @@ export class ArcInvestigation {
         const this$ = this;
         return HashCodes_boxHashArray([this$.Identifier, HashCodes_boxHashOption(this$.Title), HashCodes_boxHashOption(this$.Description), HashCodes_boxHashOption(this$.SubmissionDate), HashCodes_boxHashOption(this$.PublicReleaseDate), HashCodes_boxHashArray(this$.Publications), HashCodes_boxHashArray(this$.Contacts), HashCodes_boxHashArray(this$.OntologySourceReferences), HashCodes_boxHashArray(Array.from(this$.Assays)), HashCodes_boxHashArray(Array.from(this$.Studies)), HashCodes_boxHashArray(Array.from(this$.RegisteredStudyIdentifiers)), HashCodes_boxHashArray(this$.Comments), HashCodes_boxHashArray(this$.Remarks)]) | 0;
     }
+    GetLightHashCode() {
+        const this$ = this;
+        return HashCodes_boxHashArray([this$.Identifier, HashCodes_boxHashOption(this$.Title), HashCodes_boxHashOption(this$.Description), HashCodes_boxHashOption(this$.SubmissionDate), HashCodes_boxHashOption(this$.PublicReleaseDate), HashCodes_boxHashArray(this$.Publications), HashCodes_boxHashArray(this$.Contacts), HashCodes_boxHashArray(this$.OntologySourceReferences), HashCodes_boxHashArray(this$.Comments), HashCodes_boxHashArray(this$.Remarks)]) | 0;
+    }
 }
 
 export function ArcInvestigation_$reflection() {

package/ISA/ISA.Json/ArcTypes/ArcAssay.js

@@ -1,8 +1,8 @@
 import { OntologySourceReference_encoder, OntologyAnnotation_encoder, OntologySourceReference_decoder, OntologyAnnotation_decoder } from "../Ontology.js";
 import { ConverterOptions__set_IncludeType_Z1FBCCD16, ConverterOptions__set_SetID_Z1FBCCD16, ConverterOptions_$ctor } from "../ConverterOptions.js";
-import { fromString, object as object_1, string, list as list_1 } from "../../../fable_modules/Thoth.Json.10.1.0/Decode.fs.js";
-import { uncurry2 } from "../../../fable_modules/fable-library.4.5.0/Util.js";
-import { ArcTable_encoder, ArcTable_decoder } from "./ArcTable.js";
+import { fromString, array, object as object_1, string, list as list_1 } from "../../../fable_modules/Thoth.Json.10.1.0/Decode.fs.js";
+import { safeHash, equals, uncurry2 } from "../../../fable_modules/fable-library.4.5.0/Util.js";
+import { ArcTable_compressedDecoder, ArcTable_compressedEncoder, ArcTable_encoder, ArcTable_decoder } from "./ArcTable.js";
 import { encoder, decoder as decoder_1 } from "../Person.js";
 import { encoder as encoder_1, decoder as decoder_2 } from "../Comment.js";
 import { Factor_encoder, Factor_decoder } from "../Factor.js";
@@ -12,9 +12,13 @@ import { toArray } from "../../../fable_modules/fable-library.4.5.0/List.js";
 import { toString, object, seq } from "../../../fable_modules/Thoth.Json.10.1.0/Encode.fs.js";
 import { empty, singleton, append, delay, toList, map as map_1 } from "../../../fable_modules/fable-library.4.5.0/Seq.js";
 import { ArcAssay } from "../../ISA/ArcTypes/ArcTypes.js";
+import { OATable_arrayFromMap, OATable_encoder, OATable_decoder, OATable_decodeOA, OATable_encodeOA } from "./OATable.js";
 import { Assay_decoder, Assay_encoder } from "../Assay.js";
 import { fromJsonString } from "../Decode.js";
 import { printf, toFail } from "../../../fable_modules/fable-library.4.5.0/String.js";
+import { StringTable_arrayFromMap, StringTable_encoder, StringTable_decoder } from "../StringTable.js";
+import { CellTable_arrayFromMap, CellTable_encoder, CellTable_decoder } from "./CellTable.js";
+import { Dictionary } from "../../../fable_modules/fable-library.4.5.0/MutableMap.js";
 
 export const JsonHelper_DecodeOa = OntologyAnnotation_decoder(ConverterOptions_$ctor());
 
@@ -160,6 +164,32 @@ export const ArcAssay_decoder = (path_1) => ((v) => object_1((get$) => {
     return ArcAssay.make(identifier, measurementType, technologyType, technologyPlatform, tables, performers, comments);
 }, path_1, v));
 
+export function ArcAssay_compressedEncoder(stringTable, oaTable, cellTable, assay) {
+    return object(toList(delay(() => append(singleton(["Identifier", assay.Identifier]), delay(() => append((assay.MeasurementType != null) ? singleton(["MeasurementType", OATable_encodeOA(oaTable, value_3(assay.MeasurementType))]) : empty(), delay(() => append((assay.TechnologyType != null) ? singleton(["TechnologyType", OATable_encodeOA(oaTable, value_3(assay.TechnologyType))]) : empty(), delay(() => append((assay.TechnologyPlatform != null) ? singleton(["TechnologyPlatform", OATable_encodeOA(oaTable, value_3(assay.TechnologyPlatform))]) : empty(), delay(() => append((assay.Tables.length !== 0) ? singleton(["Tables", seq(map_1((table) => ArcTable_compressedEncoder(stringTable, oaTable, cellTable, table), assay.Tables))]) : empty(), delay(() => append((assay.Performers.length !== 0) ? singleton(["Performers", JsonHelper_EncoderPersons(assay.Performers)]) : empty(), delay(() => ((assay.Comments.length !== 0) ? singleton(["Comments", JsonHelper_EncoderComments(assay.Comments)]) : empty()))))))))))))))));
+}
+
+export function ArcAssay_compressedDecoder(stringTable, oaTable, cellTable) {
+    return (path_2) => ((v) => object_1((get$) => {
+        let arg_1, decoder, objectArg;
+        const tables = defaultArg(map((collection) => Array.from(collection), (arg_1 = ((decoder = ArcTable_compressedDecoder(stringTable, oaTable, cellTable), (path) => ((value) => array(uncurry2(decoder), path, value)))), (objectArg = get$.Optional, objectArg.Field("Tables", uncurry2(arg_1))))), []);
+        let identifier;
+        const objectArg_1 = get$.Required;
+        identifier = objectArg_1.Field("Identifier", string);
+        let measurementType;
+        const objectArg_2 = get$.Optional;
+        measurementType = objectArg_2.Field("MeasurementType", (s, o) => OATable_decodeOA(oaTable, s, o));
+        let technologyType;
+        const objectArg_3 = get$.Optional;
+        technologyType = objectArg_3.Field("TechnologyType", (s_1, o_1) => OATable_decodeOA(oaTable, s_1, o_1));
+        let technologyPlatform;
+        const objectArg_4 = get$.Optional;
+        technologyPlatform = objectArg_4.Field("TechnologyPlatform", (s_2, o_2) => OATable_decodeOA(oaTable, s_2, o_2));
+        const performers = JsonHelper_tryGetPersons(get$, "Performers");
+        const comments = JsonHelper_tryGetComments(get$, "Comments");
+        return ArcAssay.make(identifier, measurementType, technologyType, technologyPlatform, tables, performers, comments);
+    }, path_2, v));
+}
+
 /**
  * exports in json-ld format
  */
@@ -209,3 +239,44 @@ export function ARCtrl_ISA_ArcAssay__ArcAssay_toArcJsonString_Static_1C75D08D(a)
     return ARCtrl_ISA_ArcAssay__ArcAssay_ToArcJsonString_71136F3F(a);
 }
 
+export function ARCtrl_ISA_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5(jsonString) {
+    const matchValue = fromString((path, v) => object_1((get$) => {
+        let arg_5, objectArg_2;
+        let stringTable;
+        const objectArg = get$.Required;
+        stringTable = objectArg.Field("stringTable", uncurry2(StringTable_decoder));
+        let oaTable;
+        const arg_3 = OATable_decoder(stringTable);
+        const objectArg_1 = get$.Required;
+        oaTable = objectArg_1.Field("oaTable", uncurry2(arg_3));
+        const arg_7 = ArcAssay_compressedDecoder(stringTable, oaTable, (arg_5 = CellTable_decoder(stringTable, oaTable), (objectArg_2 = get$.Required, objectArg_2.Field("cellTable", uncurry2(arg_5)))));
+        const objectArg_3 = get$.Required;
+        return objectArg_3.Field("assay", uncurry2(arg_7));
+    }, path, v), jsonString);
+    if (matchValue.tag === 1) {
+        return toFail(printf("Error. Unable to parse json string to ArcAssay: %s"))(matchValue.fields[0]);
+    }
+    else {
+        return matchValue.fields[0];
+    }
+}
+
+export function ARCtrl_ISA_ArcAssay__ArcAssay_ToCompressedJsonString_71136F3F(this$, spaces) {
+    const spaces_1 = defaultArg(spaces, 0) | 0;
+    const stringTable = new Map([]);
+    const oaTable = new Dictionary([], {
+        Equals: equals,
+        GetHashCode: safeHash,
+    });
+    const cellTable = new Dictionary([], {
+        Equals: equals,
+        GetHashCode: safeHash,
+    });
+    const arcAssay = ArcAssay_compressedEncoder(stringTable, oaTable, cellTable, this$);
+    return toString(spaces_1, object([["cellTable", CellTable_encoder(stringTable, oaTable, CellTable_arrayFromMap(cellTable))], ["oaTable", OATable_encoder(stringTable, OATable_arrayFromMap(oaTable))], ["stringTable", StringTable_encoder(StringTable_arrayFromMap(stringTable))], ["assay", arcAssay]]));
+}
+
+export function ARCtrl_ISA_ArcAssay__ArcAssay_toCompressedJsonString_Static_1C75D08D(a) {
+    return ARCtrl_ISA_ArcAssay__ArcAssay_ToCompressedJsonString_71136F3F(a);
+}
+

package/ISA/ISA.Json/ArcTypes/ArcStudy.js

@@ -1,14 +1,19 @@
 import { toString, seq, object } from "../../../fable_modules/Thoth.Json.10.1.0/Encode.fs.js";
 import { map, empty, singleton, append, delay, toList } from "../../../fable_modules/fable-library.4.5.0/Seq.js";
-import { defaultArg, value as value_7 } from "../../../fable_modules/fable-library.4.5.0/Option.js";
+import { map as map_1, defaultArg, value as value_7 } from "../../../fable_modules/fable-library.4.5.0/Option.js";
 import { JsonHelper_tryGetComments, JsonHelper_tryGetFactors, JsonHelper_tryGetStringResizeArray, JsonHelper_tryGetTables, JsonHelper_tryGetOAs, JsonHelper_tryGetPersons, JsonHelper_tryGetPublications, JsonHelper_EncoderComments, JsonHelper_EncoderFactors, JsonHelper_EncoderTables, JsonHelper_EncoderOAs, JsonHelper_EncoderPersons, JsonHelper_EncoderPublications } from "./ArcAssay.js";
-import { fromString, string, object as object_1 } from "../../../fable_modules/Thoth.Json.10.1.0/Decode.fs.js";
+import { fromString, array, string, object as object_1 } from "../../../fable_modules/Thoth.Json.10.1.0/Decode.fs.js";
 import { ArcStudy } from "../../ISA/ArcTypes/ArcTypes.js";
+import { ArcTable_compressedDecoder, ArcTable_compressedEncoder } from "./ArcTable.js";
+import { safeHash, equals, uncurry2 } from "../../../fable_modules/fable-library.4.5.0/Util.js";
 import { Study_decoder, Study_encoder } from "../Study.js";
 import { ConverterOptions__set_IncludeType_Z1FBCCD16, ConverterOptions__set_SetID_Z1FBCCD16, ConverterOptions_$ctor } from "../ConverterOptions.js";
 import { fromJsonString } from "../Decode.js";
-import { uncurry2 } from "../../../fable_modules/fable-library.4.5.0/Util.js";
 import { printf, toFail } from "../../../fable_modules/fable-library.4.5.0/String.js";
+import { StringTable_arrayFromMap, StringTable_encoder, StringTable_decoder } from "../StringTable.js";
+import { OATable_arrayFromMap, OATable_encoder, OATable_decoder } from "./OATable.js";
+import { CellTable_arrayFromMap, CellTable_encoder, CellTable_decoder } from "./CellTable.js";
+import { Dictionary } from "../../../fable_modules/fable-library.4.5.0/MutableMap.js";
 
 export function ArcStudy_encoder(study) {
     return object(toList(delay(() => append(singleton(["Identifier", study.Identifier]), delay(() => append((study.Title != null) ? singleton(["Title", value_7(study.Title)]) : empty(), delay(() => append((study.Description != null) ? singleton(["Description", value_7(study.Description)]) : empty(), delay(() => append((study.SubmissionDate != null) ? singleton(["SubmissionDate", value_7(study.SubmissionDate)]) : empty(), delay(() => append((study.PublicReleaseDate != null) ? singleton(["PublicReleaseDate", value_7(study.PublicReleaseDate)]) : empty(), delay(() => append((study.Publications.length !== 0) ? singleton(["Publications", JsonHelper_EncoderPublications(study.Publications)]) : empty(), delay(() => append((study.Contacts.length !== 0) ? singleton(["Contacts", JsonHelper_EncoderPersons(study.Contacts)]) : empty(), delay(() => append((study.StudyDesignDescriptors.length !== 0) ? singleton(["StudyDesignDescriptors", JsonHelper_EncoderOAs(study.StudyDesignDescriptors)]) : empty(), delay(() => append((study.TableCount !== 0) ? singleton(["Tables", JsonHelper_EncoderTables(study.Tables)]) : empty(), delay(() => append((study.RegisteredAssayIdentifiers.length !== 0) ? singleton(["RegisteredAssayIdentifiers", seq(map((value_5) => value_5, study.RegisteredAssayIdentifiers))]) : empty(), delay(() => append((study.Factors.length !== 0) ? singleton(["Factors", JsonHelper_EncoderFactors(study.Factors)]) : empty(), delay(() => ((study.Comments.length !== 0) ? singleton(["Comments", JsonHelper_EncoderComments(study.Comments)]) : empty()))))))))))))))))))))))))));
@@ -40,6 +45,39 @@ export const ArcStudy_decoder = (path_5) => ((v) => object_1((get$) => {
     return ArcStudy.make(identifier, title, description, submissionDate, publicReleaseDate, publications, contacts, studyDesignDescriptors, tables, registeredAssayIdentifiers, factors, comments);
 }, path_5, v));
 
+export function ArcStudy_compressedEncoder(stringTable, oaTable, cellTable, study) {
+    return object(toList(delay(() => append(singleton(["Identifier", study.Identifier]), delay(() => append((study.Title != null) ? singleton(["Title", value_7(study.Title)]) : empty(), delay(() => append((study.Description != null) ? singleton(["Description", value_7(study.Description)]) : empty(), delay(() => append((study.SubmissionDate != null) ? singleton(["SubmissionDate", value_7(study.SubmissionDate)]) : empty(), delay(() => append((study.PublicReleaseDate != null) ? singleton(["PublicReleaseDate", value_7(study.PublicReleaseDate)]) : empty(), delay(() => append((study.Publications.length !== 0) ? singleton(["Publications", JsonHelper_EncoderPublications(study.Publications)]) : empty(), delay(() => append((study.Contacts.length !== 0) ? singleton(["Contacts", JsonHelper_EncoderPersons(study.Contacts)]) : empty(), delay(() => append((study.StudyDesignDescriptors.length !== 0) ? singleton(["StudyDesignDescriptors", JsonHelper_EncoderOAs(study.StudyDesignDescriptors)]) : empty(), delay(() => append((study.TableCount !== 0) ? singleton(["Tables", seq(map((table) => ArcTable_compressedEncoder(stringTable, oaTable, cellTable, table), study.Tables))]) : empty(), delay(() => append((study.RegisteredAssayIdentifiers.length !== 0) ? singleton(["RegisteredAssayIdentifiers", seq(map((value_5) => value_5, study.RegisteredAssayIdentifiers))]) : empty(), delay(() => append((study.Factors.length !== 0) ? singleton(["Factors", JsonHelper_EncoderFactors(study.Factors)]) : empty(), delay(() => ((study.Comments.length !== 0) ? singleton(["Comments", JsonHelper_EncoderComments(study.Comments)]) : empty()))))))))))))))))))))))))));
+}
+
+export function ArcStudy_compressedDecoder(stringTable, oaTable, cellTable) {
+    return (path_6) => ((v) => object_1((get$) => {
+        let arg_1, decoder, objectArg;
+        const tables = defaultArg(map_1((collection) => Array.from(collection), (arg_1 = ((decoder = ArcTable_compressedDecoder(stringTable, oaTable, cellTable), (path) => ((value) => array(uncurry2(decoder), path, value)))), (objectArg = get$.Optional, objectArg.Field("Tables", uncurry2(arg_1))))), []);
+        let identifier;
+        const objectArg_1 = get$.Required;
+        identifier = objectArg_1.Field("Identifier", string);
+        let title;
+        const objectArg_2 = get$.Optional;
+        title = objectArg_2.Field("Title", string);
+        let description;
+        const objectArg_3 = get$.Optional;
+        description = objectArg_3.Field("Description", string);
+        let submissionDate;
+        const objectArg_4 = get$.Optional;
+        submissionDate = objectArg_4.Field("SubmissionDate", string);
+        let publicReleaseDate;
+        const objectArg_5 = get$.Optional;
+        publicReleaseDate = objectArg_5.Field("PublicReleaseDate", string);
+        const publications = JsonHelper_tryGetPublications(get$, "Publications");
+        const contacts = JsonHelper_tryGetPersons(get$, "Contacts");
+        const studyDesignDescriptors = JsonHelper_tryGetOAs(get$, "StudyDesignDescriptors");
+        const registeredAssayIdentifiers = JsonHelper_tryGetStringResizeArray(get$, "RegisteredAssayIdentifiers");
+        const factors = JsonHelper_tryGetFactors(get$, "Factors");
+        const comments = JsonHelper_tryGetComments(get$, "Comments");
+        return ArcStudy.make(identifier, title, description, submissionDate, publicReleaseDate, publications, contacts, studyDesignDescriptors, tables, registeredAssayIdentifiers, factors, comments);
+    }, path_6, v));
+}
+
 /**
  * exports in json-ld format
  */
@@ -89,3 +127,44 @@ export function ARCtrl_ISA_ArcStudy__ArcStudy_toArcJsonString_Static_1B3D5E9B(a)
     return ARCtrl_ISA_ArcStudy__ArcStudy_ToArcJsonString_71136F3F(a);
 }
 
+export function ARCtrl_ISA_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5(jsonString) {
+    const matchValue = fromString((path, v) => object_1((get$) => {
+        let arg_5, objectArg_2;
+        let stringTable;
+        const objectArg = get$.Required;
+        stringTable = objectArg.Field("stringTable", uncurry2(StringTable_decoder));
+        let oaTable;
+        const arg_3 = OATable_decoder(stringTable);
+        const objectArg_1 = get$.Required;
+        oaTable = objectArg_1.Field("oaTable", uncurry2(arg_3));
+        const arg_7 = ArcStudy_compressedDecoder(stringTable, oaTable, (arg_5 = CellTable_decoder(stringTable, oaTable), (objectArg_2 = get$.Required, objectArg_2.Field("cellTable", uncurry2(arg_5)))));
+        const objectArg_3 = get$.Required;
+        return objectArg_3.Field("study", uncurry2(arg_7));
+    }, path, v), jsonString);
+    if (matchValue.tag === 1) {
+        return toFail(printf("Error. Unable to parse json string to ArcAssay: %s"))(matchValue.fields[0]);
+    }
+    else {
+        return matchValue.fields[0];
+    }
+}
+
+export function ARCtrl_ISA_ArcStudy__ArcStudy_ToCompressedJsonString_71136F3F(this$, spaces) {
+    const spaces_1 = defaultArg(spaces, 0) | 0;
+    const stringTable = new Map([]);
+    const oaTable = new Dictionary([], {
+        Equals: equals,
+        GetHashCode: safeHash,
+    });
+    const cellTable = new Dictionary([], {
+        Equals: equals,
+        GetHashCode: safeHash,
+    });
+    const arcStudy = ArcStudy_compressedEncoder(stringTable, oaTable, cellTable, this$);
+    return toString(spaces_1, object([["cellTable", CellTable_encoder(stringTable, oaTable, CellTable_arrayFromMap(cellTable))], ["oaTable", OATable_encoder(stringTable, OATable_arrayFromMap(oaTable))], ["stringTable", StringTable_encoder(StringTable_arrayFromMap(stringTable))], ["study", arcStudy]]));
+}
+
+export function ARCtrl_ISA_ArcStudy__ArcStudy_toCompressedJsonString_Static_1B3D5E9B(s) {
+    return ARCtrl_ISA_ArcStudy__ArcStudy_ToCompressedJsonString_71136F3F(s);
+}
+