@nfdi4plants/arctrl 1.0.0-alpha8 → 1.0.0-beta.1

package/fable_modules/{FsSpreadsheet.4.1.0 → FsSpreadsheet.5.0.0}/Tables/FsTable.fs.js

@@ -2,18 +2,17 @@ import { disposeSafe, getEnumerator, comparePrimitives, int32ToString, defaultOf
 import { FsRangeBase_$reflection, FsRangeBase, FsRangeBase__set_RangeAddress_6A2513BC, FsRangeBase__ColumnCount, FsRangeBase__get_RangeAddress } from "../Ranges/FsRangeBase.fs.js";
 import { exists, toList, choose, tryPick, tryFind, find, max, length, iterate, iterateIndexed, map, reduce, singleton, collect, delay, initialize } from "../../fable-library.4.1.4/Seq.js";
 import { FsRange_$ctor_6A2513BC, FsRange__FirstRow } from "../Ranges/FsRange.fs.js";
+import { FsAddress__get_ColumnNumber, FsAddress_$ctor_Z37302880, FsAddress__get_RowNumber } from "../FsAddress.fs.js";
+import { FsRangeAddress__Copy, FsRangeAddress__Union_6A2513BC, FsRangeAddress__get_LastAddress, FsRangeAddress_$ctor_7E77A4A0, FsRangeAddress__get_FirstAddress } from "../Ranges/FsRangeAddress.fs.js";
+import { FsRow } from "../FsRow.fs.js";
 import { FsColumn } from "../FsColumn.fs.js";
-import { FsRangeAddress__Copy, FsRangeAddress__Union_6A2513BC, FsRangeAddress__get_LastAddress, FsRangeAddress__get_FirstAddress, FsRangeAddress_$ctor_7E77A4A0 } from "../Ranges/FsRangeAddress.fs.js";
-import { FsAddress__get_ColumnNumber, FsAddress__get_RowNumber, FsAddress_$ctor_Z37302880 } from "../FsAddress.fs.js";
 import { rangeDouble } from "../../fable-library.4.1.4/Range.js";
-import { FsRow } from "../FsRow.fs.js";
 import { FsTableField__set_Index_Z524259A4, FsTableField_$ctor_Z18115A39, FsTableField__HeaderCell_10EBE01C, FsTableField__get_Index, FsTableField_$ctor_726EFFB, FsTableField__get_Name, FsTableField_$ctor_6547009B, FsTableField__get_Column } from "./FsTableField.fs.js";
 import { getItemFromDict, addToDict, addToSet } from "../../fable-library.4.1.4/MapUtil.js";
 import { FsRangeColumn__get_Index, FsRangeColumn_$ctor_6A2513BC, FsRangeColumn_$ctor_Z524259A4 } from "../Ranges/FsRangeColumn.fs.js";
 import { FsCellsCollection__TryGetCell_Z37302880, FsCellsCollection__GetCellsInColumn_Z524259A4, Dictionary_tryGet } from "../Cells/FsCellsCollection.fs.js";
 import { replace } from "../../fable-library.4.1.4/String.js";
 import { defaultArg, value as value_2 } from "../../fable-library.4.1.4/Option.js";
-import { FsRangeRow__Cells_Z2740B3CA } from "../Ranges/FsRangeRow.fs.js";
 import { DataType } from "../Cells/FsCell.fs.js";
 import { class_type } from "../../fable-library.4.1.4/Reflection.js";
 
@@ -57,6 +56,27 @@ export class FsTable extends FsRangeBase {
         const this$ = this;
         return !this$.ShowHeaderRow ? defaultOf() : FsRange__FirstRow(FsRange_$ctor_6A2513BC(FsRangeBase__get_RangeAddress(this$)));
     }
+    TryGetHeaderRow(cellsCollection) {
+        const this$ = this;
+        const matchValue = this$.ShowHeaderRow;
+        if (matchValue) {
+            const rowIndex = FsAddress__get_RowNumber(FsRangeAddress__get_FirstAddress(FsRangeBase__get_RangeAddress(this$))) | 0;
+            return new FsRow(FsRangeAddress_$ctor_7E77A4A0(FsAddress_$ctor_Z37302880(rowIndex, FsAddress__get_ColumnNumber(FsRangeAddress__get_FirstAddress(FsRangeBase__get_RangeAddress(this$)))), FsAddress_$ctor_Z37302880(rowIndex, FsAddress__get_ColumnNumber(FsRangeAddress__get_LastAddress(FsRangeBase__get_RangeAddress(this$))))), cellsCollection);
+        }
+        else {
+            return void 0;
+        }
+    }
+    GetHeaderRow(cellsCollection) {
+        const this$ = this;
+        const matchValue = this$.TryGetHeaderRow(cellsCollection);
+        if (matchValue == null) {
+            throw new Error(`Error. Unable to get header row for table "${this$.Name}" as \`ShowHeaderRow\` is set to \`false\`.`);
+        }
+        else {
+            return matchValue;
+        }
+    }
     GetColumns(cellsCollection) {
         const this$ = this;
         return delay(() => collect((i) => singleton(new FsColumn(FsRangeAddress_$ctor_7E77A4A0(FsAddress_$ctor_Z37302880(FsAddress__get_RowNumber(FsRangeAddress__get_FirstAddress(FsRangeBase__get_RangeAddress(this$))), i), FsAddress_$ctor_Z37302880(FsAddress__get_RowNumber(FsRangeAddress__get_LastAddress(FsRangeBase__get_RangeAddress(this$))), i)), cellsCollection)), rangeDouble(FsAddress__get_ColumnNumber(FsRangeAddress__get_FirstAddress(FsRangeBase__get_RangeAddress(this$))), 1, FsAddress__get_ColumnNumber(FsRangeAddress__get_LastAddress(FsRangeBase__get_RangeAddress(this$))))));
@@ -258,11 +278,11 @@ export class FsTable extends FsRangeBase {
             const oldFieldNames = this$._fieldNames;
             this$._fieldNames = (new Map([]));
             let cellPos = 0;
-            const enumerator = getEnumerator(FsRangeRow__Cells_Z2740B3CA(this$.HeadersRow(), cellsCollection));
+            const enumerator = getEnumerator(this$.GetHeaderRow(cellsCollection));
             try {
                 while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
                     const cell = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
-                    let name = cell.Value;
+                    let name = cell.ValueAsString();
                     const matchValue = Dictionary_tryGet(name, oldFieldNames);
                     if (matchValue == null) {
                         if ((name === defaultOf()) !== (name === "")) {

package/fable_modules/{FsSpreadsheet.4.1.0 → FsSpreadsheet.5.0.0}/obj/Release/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs

@@ -10,10 +10,10 @@ open System.Reflection
 [<assembly: System.Reflection.AssemblyCompanyAttribute("Heinrich Lukas Weil, Oliver Maus, Kevin Schneider, Kevin Frey, Timo Mühlhaus")>]
 [<assembly: System.Reflection.AssemblyConfigurationAttribute("Release")>]
 [<assembly: System.Reflection.AssemblyDescriptionAttribute("Fable compliant Spreadsheet creation and manipulation in FSharp")>]
-[<assembly: System.Reflection.AssemblyFileVersionAttribute("4.1.0.0")>]
-[<assembly: System.Reflection.AssemblyInformationalVersionAttribute("4.1.0")>]
+[<assembly: System.Reflection.AssemblyFileVersionAttribute("5.0.0.0")>]
+[<assembly: System.Reflection.AssemblyInformationalVersionAttribute("5.0.0")>]
 [<assembly: System.Reflection.AssemblyProductAttribute("FsSpreadsheet")>]
 [<assembly: System.Reflection.AssemblyTitleAttribute("FsSpreadsheet")>]
-[<assembly: System.Reflection.AssemblyVersionAttribute("4.1.0.0")>]
+[<assembly: System.Reflection.AssemblyVersionAttribute("5.0.0.0")>]
 [<assembly: System.Reflection.AssemblyMetadataAttribute("RepositoryUrl", "https://github.com/CSBiology/FsSpreadsheet")>]
 do()

package/fable_modules/project_cracked.json

@@ -1 +1 @@
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package/index.js

@@ -8,5 +8,6 @@ export { CompositeColumn } from "./ISA/ISA/ArcTypes/CompositeColumn.js";
 export { ArcTable } from "./ISA/ISA/ArcTypes/ArcTable.js";
 export { ArcAssay, ArcStudy, ArcInvestigation } from "./ISA/ISA/ArcTypes/ArcTypes.js";
 export { Template, Organisation } from "./Templates/Template.js";
+export { Templates } from "./Templates/Templates.js";
 export { JsWeb } from "./Templates/Template.Web.js";
 export { ARC } from "./ARC.js";

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@nfdi4plants/arctrl",
-  "version": "1.0.0-alpha8+1c6c4fa",
+  "version": "1.0.0-beta.1+68b3919",
   "description": "Top level ARC DataModel and API function descriptions.",
   "type": "module",
   "main": "Index.js",

package/fable_modules/FsSpreadsheet.4.1.0/Cells/FsCell.fs.js

@@ -1,240 +0,0 @@
-import { toString as toString_1, Union } from "../../fable-library.4.1.4/Types.js";
-import { class_type, union_type } from "../../fable-library.4.1.4/Reflection.js";
-import { FsAddress__Copy, CellReference_indexToColAdress, FsAddress__get_ColumnNumber, FsAddress__get_RowNumber, FsAddress_$ctor_Z37302880 } from "../FsAddress.fs.js";
-import { int64ToString, int16ToString, int32ToString } from "../../fable-library.4.1.4/Util.js";
-import { parse as parse_4, toString } from "../../fable-library.4.1.4/Decimal.js";
-import Decimal from "../../fable-library.4.1.4/Decimal.js";
-import { parse } from "../../fable-library.4.1.4/Boolean.js";
-import { parse as parse_1 } from "../../fable-library.4.1.4/Double.js";
-import { parse as parse_2 } from "../../fable-library.4.1.4/Int32.js";
-import { toUInt64, toInt64 } from "../../fable-library.4.1.4/BigInt.js";
-import { parse as parse_3 } from "../../fable-library.4.1.4/Long.js";
-import { parse as parse_5 } from "../../fable-library.4.1.4/Date.js";
-import { parse as parse_6 } from "../../fable-library.4.1.4/Guid.js";
-import { parse as parse_7 } from "../../fable-library.4.1.4/Char.js";
-import { map, defaultArg } from "../../fable-library.4.1.4/Option.js";
-
-export class DataType extends Union {
-    constructor(tag, fields) {
-        super();
-        this.tag = tag;
-        this.fields = fields;
-    }
-    cases() {
-        return ["String", "Boolean", "Number", "Date", "Empty"];
-    }
-}
-
-export function DataType_$reflection() {
-    return union_type("FsSpreadsheet.DataType", [], DataType, () => [[], [], [], [], []]);
-}
-
-export class FsCell {
-    constructor(value, dataType, address) {
-        this._cellValue = toString_1(value);
-        this._dataType = defaultArg(dataType, new DataType(0, []));
-        this._comment = "";
-        this._hyperlink = "";
-        this._richText = "";
-        this._formulaA1 = "";
-        this._formulaR1C1 = "";
-        this._rowIndex = (defaultArg(map(FsAddress__get_RowNumber, address), 0) | 0);
-        this._columnIndex = (defaultArg(map(FsAddress__get_ColumnNumber, address), 0) | 0);
-    }
-    static empty() {
-        return new FsCell("", new DataType(4, []), FsAddress_$ctor_Z37302880(0, 0));
-    }
-    get Value() {
-        const self = this;
-        return self._cellValue;
-    }
-    set Value(value) {
-        const self = this;
-        self._cellValue = value;
-    }
-    get DataType() {
-        const self = this;
-        return self._dataType;
-    }
-    set DataType(dataType) {
-        const self = this;
-        self._dataType = dataType;
-    }
-    get ColumnNumber() {
-        const self = this;
-        return self._columnIndex | 0;
-    }
-    set ColumnNumber(colI) {
-        const self = this;
-        self._columnIndex = (colI | 0);
-    }
-    get RowNumber() {
-        const self = this;
-        return self._rowIndex | 0;
-    }
-    set RowNumber(rowI) {
-        const self = this;
-        self._rowIndex = (rowI | 0);
-    }
-    get Address() {
-        const self = this;
-        return FsAddress_$ctor_Z37302880(self._rowIndex, self._columnIndex);
-    }
-    set Address(address) {
-        const self = this;
-        self._rowIndex = (FsAddress__get_RowNumber(address) | 0);
-        self._columnIndex = (FsAddress__get_ColumnNumber(address) | 0);
-    }
-    static create(rowNumber, colNumber, value) {
-        let patternInput;
-        const value_1_1 = value;
-        patternInput = ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : ((typeof value_1_1 === "boolean") ? (value_1_1 ? [new DataType(1, []), "True"] : [new DataType(1, []), "False"]) : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int32ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int16ToString(value_1_1)] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), int64ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((value_1_1 instanceof Decimal) ? [new DataType(2, []), toString(value_1_1)] : ((value_1_1 instanceof Date) ? [new DataType(3, []), toString_1(value_1_1)] : ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : [new DataType(0, []), toString_1(value_1_1)])))))))))))))));
-        return new FsCell(patternInput[1], patternInput[0], FsAddress_$ctor_Z37302880(rowNumber, colNumber));
-    }
-    static createEmpty() {
-        return new FsCell("", new DataType(4, []), FsAddress_$ctor_Z37302880(0, 0));
-    }
-    static createWithAdress(adress, value) {
-        let patternInput;
-        const value_1_1 = value;
-        patternInput = ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : ((typeof value_1_1 === "boolean") ? (value_1_1 ? [new DataType(1, []), "True"] : [new DataType(1, []), "False"]) : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int32ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int16ToString(value_1_1)] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), int64ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((value_1_1 instanceof Decimal) ? [new DataType(2, []), toString(value_1_1)] : ((value_1_1 instanceof Date) ? [new DataType(3, []), toString_1(value_1_1)] : ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : [new DataType(0, []), toString_1(value_1_1)])))))))))))))));
-        return new FsCell(patternInput[1], patternInput[0], adress);
-    }
-    static createEmptyWithAdress(adress) {
-        return new FsCell("", new DataType(4, []), adress);
-    }
-    static createWithDataType(dataType, rowNumber, colNumber, value) {
-        return new FsCell(value, dataType, FsAddress_$ctor_Z37302880(rowNumber, colNumber));
-    }
-    toString() {
-        const self = this;
-        return `${CellReference_indexToColAdress(self.ColumnNumber >>> 0)}${self.RowNumber} : ${self.Value} | ${self.DataType}`;
-    }
-    CopyFrom(otherCell) {
-        const self = this;
-        self.DataType = otherCell.DataType;
-        self.Value = otherCell.Value;
-    }
-    CopyTo(target) {
-        const self = this;
-        target.DataType = self.DataType;
-        target.Value = self.Value;
-    }
-    static copyFromTo(sourceCell, targetCell) {
-        targetCell.DataType = sourceCell.DataType;
-        targetCell.Value = sourceCell.Value;
-        return targetCell;
-    }
-    Copy() {
-        const self = this;
-        return new FsCell(self.Value, self.DataType, FsAddress__Copy(self.Address));
-    }
-    static copy(cell) {
-        return cell.Copy();
-    }
-    ValueAsString() {
-        const self = this;
-        return self.Value;
-    }
-    static getValueAsString(cell) {
-        return cell.ValueAsString();
-    }
-    ValueAsBool() {
-        const self = this;
-        return parse(self.Value);
-    }
-    static getValueAsBool(cell) {
-        return cell.ValueAsBool();
-    }
-    ValueAsFloat() {
-        const self = this;
-        return parse_1(self.Value);
-    }
-    static getValueAsFloat(cell) {
-        return cell.ValueAsFloat();
-    }
-    ValueAsInt() {
-        const self = this;
-        return parse_2(self.Value, 511, false, 32) | 0;
-    }
-    static getValueAsInt(cell) {
-        return cell.ValueAsInt();
-    }
-    ValueAsUInt() {
-        const self = this;
-        return parse_2(self.Value, 511, true, 32);
-    }
-    static getValueAsUInt(cell) {
-        return cell.ValueAsUInt();
-    }
-    ValueAsLong() {
-        const self = this;
-        return toInt64(parse_3(self.Value, 511, false, 64));
-    }
-    static getValueAsLong(cell) {
-        return cell.ValueAsLong();
-    }
-    ValueAsULong() {
-        const self = this;
-        return toUInt64(parse_3(self.Value, 511, true, 64));
-    }
-    static getValueAsULong(cell) {
-        return cell.ValueAsULong();
-    }
-    ValueAsDouble() {
-        const self = this;
-        return parse_1(self.Value);
-    }
-    static getValueAsDouble(cell) {
-        return cell.ValueAsDouble();
-    }
-    ValueAsDecimal() {
-        const self = this;
-        return parse_4(self.Value);
-    }
-    static getValueAsDecimal(cell) {
-        return cell.ValueAsDecimal();
-    }
-    ValueAsDateTime() {
-        const self = this;
-        return parse_5(self.Value);
-    }
-    static getValueAsDateTime(cell) {
-        return cell.ValueAsDateTime();
-    }
-    ValueAsGuid() {
-        const self = this;
-        return parse_6(self.Value);
-    }
-    static getValueAsGuid(cell) {
-        return cell.ValueAsGuid();
-    }
-    ValueAsChar() {
-        const self = this;
-        return parse_7(self.Value);
-    }
-    static getValueAsChar(cell) {
-        return cell.ValueAsChar();
-    }
-    SetValueAs(value) {
-        const self = this;
-        let patternInput;
-        const value_1_1 = value;
-        patternInput = ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : ((typeof value_1_1 === "boolean") ? (value_1_1 ? [new DataType(1, []), "True"] : [new DataType(1, []), "False"]) : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int32ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), int16ToString(value_1_1)] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), int64ToString(value_1_1)] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "bigint") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((typeof value_1_1 === "number") ? [new DataType(2, []), value_1_1.toString()] : ((value_1_1 instanceof Decimal) ? [new DataType(2, []), toString(value_1_1)] : ((value_1_1 instanceof Date) ? [new DataType(3, []), toString_1(value_1_1)] : ((typeof value_1_1 === "string") ? [new DataType(0, []), value_1_1] : [new DataType(0, []), toString_1(value_1_1)])))))))))))))));
-        self._dataType = patternInput[0];
-        self._cellValue = patternInput[1];
-    }
-    static setValueAs(value, cell) {
-        cell.SetValueAs(value);
-        return cell;
-    }
-}
-
-export function FsCell_$reflection() {
-    return class_type("FsSpreadsheet.FsCell", void 0, FsCell);
-}
-
-export function FsCell_$ctor_Z44506C7(value, dataType, address) {
-    return new FsCell(value, dataType, address);
-}
-