@nextage/omics-lib 1.0.2 → 1.0.6

package/build/enums.d.ts

@@ -15,6 +15,14 @@ export declare enum SecurityLogLevel {
     error = "error",
     debug = "debug"
 }
+export declare enum AppMode {
+    DEV = "development",
+    PROD = "production"
+}
+export declare enum AppStatus {
+    INIT = "INIT",
+    OK = "OK"
+}
 export declare enum BaseRoles {
     SADMIN = "SUPERADMIN",
     ADMIN = "ADMIN",

package/build/enums.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"enums.d.ts","sourceRoot":"","sources":["../src/enums.ts"],"names":[],"mappings":"AAAA,oBAAY,YAAY;IACtB,eAAe,oBAAsB;IACrC,gBAAgB,qBAAsB;IACtC,eAAe,oBAAsB;IACrC,eAAe,oBAAsB;IACrC,gBAAgB,qBAAsB;IACtC,kBAAkB,uBAAsB;IACxC,YAAY,iBAAsB;IAClC,aAAa,kBAAsB;IACnC,YAAY,iBAAsB;CACnC;AAED,oBAAY,gBAAgB;IAC1B,IAAI,SAAY;IAChB,OAAO,SAAS;IAChB,KAAK,UAAY;IACjB,KAAK,UAAY;CAClB;AAgBD,oBAAY,SAAS;IACnB,MAAM,eAAoB;IAC1B,KAAK,UAAgB;IACrB,MAAM,WAAgB;IACtB,OAAO,YAAgB;IACvB,WAAW,gBAAgB;IAC3B,UAAU,eAAgB;CAC3B"}
+{"version":3,"file":"enums.d.ts","sourceRoot":"","sources":["../src/enums.ts"],"names":[],"mappings":"AAAA,oBAAY,YAAY;IACtB,eAAe,oBAAsB;IACrC,gBAAgB,qBAAsB;IACtC,eAAe,oBAAsB;IACrC,eAAe,oBAAsB;IACrC,gBAAgB,qBAAsB;IACtC,kBAAkB,uBAAsB;IACxC,YAAY,iBAAsB;IAClC,aAAa,kBAAsB;IACnC,YAAY,iBAAsB;CACnC;AAED,oBAAY,gBAAgB;IAC1B,IAAI,SAAY;IAChB,OAAO,SAAS;IAChB,KAAK,UAAY;IACjB,KAAK,UAAY;CAClB;AAgBD,oBAAY,OAAO;IACjB,GAAG,gBAAiB;IACpB,IAAI,eAAe;CACpB;AAED,oBAAY,SAAS;IACnB,IAAI,SAAS;IACb,EAAE,OAAS;CACZ;AAED,oBAAY,SAAS;IACnB,MAAM,eAAoB;IAC1B,KAAK,UAAgB;IACrB,MAAM,WAAgB;IACtB,OAAO,YAAgB;IACvB,WAAW,gBAAgB;IAC3B,UAAU,eAAgB;CAC3B"}

package/build/enums.js

@@ -1,6 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.BaseRoles = exports.SecurityLogLevel = exports.SecurityLogs = void 0;
+exports.BaseRoles = exports.AppStatus = exports.AppMode = exports.SecurityLogLevel = exports.SecurityLogs = void 0;
 var SecurityLogs;
 (function (SecurityLogs) {
     SecurityLogs["changePwdFailed"] = "changePwdFailed";
@@ -32,6 +32,16 @@ var SecurityLogLevel;
 //   LOGIN_FAILED    = 'loginFailed',
 //   EXPIRED         = 'expired'
 // }
+var AppMode;
+(function (AppMode) {
+    AppMode["DEV"] = "development";
+    AppMode["PROD"] = "production";
+})(AppMode || (exports.AppMode = AppMode = {}));
+var AppStatus;
+(function (AppStatus) {
+    AppStatus["INIT"] = "INIT";
+    AppStatus["OK"] = "OK";
+})(AppStatus || (exports.AppStatus = AppStatus = {}));
 var BaseRoles;
 (function (BaseRoles) {
     BaseRoles["SADMIN"] = "SUPERADMIN";

package/build/enums.js.map

@@ -1 +1 @@
-{"version":3,"file":"enums.js","sourceRoot":"","sources":["../src/enums.ts"],"names":[],"mappings":";;;AAAA,IAAY,YAUX;AAVD,WAAY,YAAY;IACtB,mDAAqC,CAAA;IACrC,qDAAsC,CAAA;IACtC,mDAAqC,CAAA;IACrC,mDAAqC,CAAA;IACrC,qDAAsC,CAAA;IACtC,yDAAwC,CAAA;IACxC,6CAAkC,CAAA;IAClC,+CAAmC,CAAA;IACnC,6CAAkC,CAAA;AACpC,CAAC,EAVW,YAAY,4BAAZ,YAAY,QAUvB;AAED,IAAY,gBAKX;AALD,WAAY,gBAAgB;IAC1B,iCAAgB,CAAA;IAChB,oCAAgB,CAAA;IAChB,mCAAiB,CAAA;IACjB,mCAAiB,CAAA;AACnB,CAAC,EALW,gBAAgB,gCAAhB,gBAAgB,QAK3B;AAED,2BAA2B;AAC3B,qBAAqB;AACrB,uBAAuB;AACvB,uBAAuB;AACvB,sBAAsB;AACtB,IAAI;AAEJ,6BAA6B;AAC7B,sCAAsC;AACtC,uCAAuC;AACvC,qCAAqC;AACrC,gCAAgC;AAChC,IAAI;AAEJ,IAAY,SAOX;AAPD,WAAY,SAAS;IACnB,kCAA0B,CAAA;IAC1B,4BAAqB,CAAA;IACrB,8BAAsB,CAAA;IACtB,gCAAuB,CAAA;IACvB,wCAA2B,CAAA;IAC3B,sCAA0B,CAAA;AAC5B,CAAC,EAPW,SAAS,yBAAT,SAAS,QAOpB"}
+{"version":3,"file":"enums.js","sourceRoot":"","sources":["../src/enums.ts"],"names":[],"mappings":";;;AAAA,IAAY,YAUX;AAVD,WAAY,YAAY;IACtB,mDAAqC,CAAA;IACrC,qDAAsC,CAAA;IACtC,mDAAqC,CAAA;IACrC,mDAAqC,CAAA;IACrC,qDAAsC,CAAA;IACtC,yDAAwC,CAAA;IACxC,6CAAkC,CAAA;IAClC,+CAAmC,CAAA;IACnC,6CAAkC,CAAA;AACpC,CAAC,EAVW,YAAY,4BAAZ,YAAY,QAUvB;AAED,IAAY,gBAKX;AALD,WAAY,gBAAgB;IAC1B,iCAAgB,CAAA;IAChB,oCAAgB,CAAA;IAChB,mCAAiB,CAAA;IACjB,mCAAiB,CAAA;AACnB,CAAC,EALW,gBAAgB,gCAAhB,gBAAgB,QAK3B;AAED,2BAA2B;AAC3B,qBAAqB;AACrB,uBAAuB;AACvB,uBAAuB;AACvB,sBAAsB;AACtB,IAAI;AAEJ,6BAA6B;AAC7B,sCAAsC;AACtC,uCAAuC;AACvC,qCAAqC;AACrC,gCAAgC;AAChC,IAAI;AAEJ,IAAY,OAGX;AAHD,WAAY,OAAO;IACjB,8BAAoB,CAAA;IACpB,8BAAmB,CAAA;AACrB,CAAC,EAHW,OAAO,uBAAP,OAAO,QAGlB;AAED,IAAY,SAGX;AAHD,WAAY,SAAS;IACnB,0BAAa,CAAA;IACb,sBAAW,CAAA;AACb,CAAC,EAHW,SAAS,yBAAT,SAAS,QAGpB;AAED,IAAY,SAOX;AAPD,WAAY,SAAS;IACnB,kCAA0B,CAAA;IAC1B,4BAAqB,CAAA;IACrB,8BAAsB,CAAA;IACtB,gCAAuB,CAAA;IACvB,wCAA2B,CAAA;IAC3B,sCAA0B,CAAA;AAC5B,CAAC,EAPW,SAAS,yBAAT,SAAS,QAOpB"}

package/build/errors.d.ts

@@ -0,0 +1,25 @@
+import { AppObject } from './interfaces';
+export declare abstract class BaseError extends Error {
+    abstract extensions: AppObject;
+}
+export declare class AuthenticationError extends BaseError {
+    extensions: AppObject;
+    constructor(message?: string, i18n?: string);
+}
+export declare class ForbiddenError extends BaseError {
+    extensions: AppObject;
+    constructor(message?: string, i18n?: string);
+}
+export declare class BadRequestError extends BaseError {
+    extensions: AppObject;
+    constructor(message?: string, i18n?: string);
+}
+export declare class NotFoundError extends BaseError {
+    extensions: AppObject;
+    constructor(message?: string, i18n?: string);
+}
+export declare class AppError extends BaseError {
+    extensions: AppObject;
+    constructor(message?: string, i18n?: string);
+}
+//# sourceMappingURL=errors.d.ts.map

package/build/errors.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"errors.d.ts","sourceRoot":"","sources":["../src/errors.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AAEzC,8BAAsB,SAAU,SAAQ,KAAK;IAC3C,QAAQ,CAAC,UAAU,EAAE,SAAS,CAAC;CAChC;AAED,qBAAa,mBAAoB,SAAQ,SAAS;IAEhD,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAkC,EAAE,IAAI,GAAE,MAA2C;CAK3G;AAED,qBAAa,cAAe,SAAQ,SAAS;IAE3C,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAoB,EAAE,IAAI,GAAE,MAA8C;CAKhG;AAED,qBAAa,eAAgB,SAAQ,SAAS;IAE5C,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAsB,EAAE,IAAI,GAAE,MAA0C;CAK9F;AAED,qBAAa,aAAc,SAAQ,SAAS;IAE1C,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAoB,EAAE,IAAI,GAAE,MAAsC;CAKxF;AAED,qBAAa,QAAS,SAAQ,SAAS;IAErC,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAA4B,EAAE,IAAI,CAAC,EAAE,MAAM;CAKjE"}

package/build/errors.js

@@ -0,0 +1,42 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.AppError = exports.NotFoundError = exports.BadRequestError = exports.ForbiddenError = exports.AuthenticationError = exports.BaseError = void 0;
+class BaseError extends Error {
+}
+exports.BaseError = BaseError;
+class AuthenticationError extends BaseError {
+    constructor(message = 'Authentication required', i18n = 'messages.authentication.required') {
+        super(message);
+        this.extensions = { code: 401, i18n };
+    }
+}
+exports.AuthenticationError = AuthenticationError;
+class ForbiddenError extends BaseError {
+    constructor(message = 'Forbidden', i18n = 'messages.authorization.accessDenied') {
+        super(message);
+        this.extensions = { code: 403, i18n };
+    }
+}
+exports.ForbiddenError = ForbiddenError;
+class BadRequestError extends BaseError {
+    constructor(message = 'Bad Request', i18n = 'messages.validation.unsatisfied') {
+        super(message);
+        this.extensions = { code: 400, i18n };
+    }
+}
+exports.BadRequestError = BadRequestError;
+class NotFoundError extends BaseError {
+    constructor(message = 'Not Found', i18n = 'messages.resource.not_found') {
+        super(message);
+        this.extensions = { code: 404, i18n };
+    }
+}
+exports.NotFoundError = NotFoundError;
+class AppError extends BaseError {
+    constructor(message = 'Application Error', i18n) {
+        super(message);
+        this.extensions = { code: 'APP_ERROR', i18n };
+    }
+}
+exports.AppError = AppError;
+//# sourceMappingURL=errors.js.map

package/build/errors.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"errors.js","sourceRoot":"","sources":["../src/errors.ts"],"names":[],"mappings":";;;AAEA,MAAsB,SAAU,SAAQ,KAAK;CAE5C;AAFD,8BAEC;AAED,MAAa,mBAAoB,SAAQ,SAAS;IAIhD,YAAY,UAAkB,yBAAyB,EAAE,OAAe,kCAAkC;QAExG,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CACF;AATD,kDASC;AAED,MAAa,cAAe,SAAQ,SAAS;IAI3C,YAAY,UAAkB,WAAW,EAAE,OAAe,qCAAqC;QAE7F,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CACF;AATD,wCASC;AAED,MAAa,eAAgB,SAAQ,SAAS;IAI5C,YAAY,UAAkB,aAAa,EAAE,OAAe,iCAAiC;QAC3F,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CAEF;AATD,0CASC;AAED,MAAa,aAAc,SAAQ,SAAS;IAI1C,YAAY,UAAkB,WAAW,EAAE,OAAe,6BAA6B;QACrF,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CAEF;AATD,sCASC;AAED,MAAa,QAAS,SAAQ,SAAS;IAIrC,YAAY,UAAkB,mBAAmB,EAAE,IAAa;QAE9D,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,CAAC;IAChD,CAAC;CACF;AATD,4BASC"}

package/build/errors_OLD/app-error.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"app-error.d.ts","sourceRoot":"","sources":["../../src/errors_OLD/app-error.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,gBAAgB,CAAC;AAE7C,qBAAa,QAAS,SAAQ,WAAW;IAKpB,OAAO,EAAE,MAAM;IAHlC,UAAU,SAAO;IACjB,UAAU;;MAAyB;gBAEhB,OAAO,EAAE,MAAM;IAOlC,eAAe;;;CAGhB"}

package/build/errors_OLD/app-error.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"app-error.js","sourceRoot":"","sources":["../../src/errors_OLD/app-error.ts"],"names":[],"mappings":";;;AAAA,iDAA6C;AAE7C,MAAa,QAAS,SAAQ,0BAAW;IAKvC,YAAmB,OAAe;QAEhC,KAAK,CAAC,OAAO,IAAI,mBAAmB,CAAC,CAAC;QAFrB,YAAO,GAAP,OAAO,CAAQ;QAHlC,eAAU,GAAG,GAAG,CAAC;QACjB,eAAU,GAAG,EAAE,IAAI,EAAE,WAAW,EAAE,CAAC;QAMjC,MAAM,CAAC,cAAc,CAAC,IAAI,EAAE,QAAQ,CAAC,SAAS,CAAC,CAAC;IAClD,CAAC;IAED,eAAe;QACb,OAAO,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC;IACrC,CAAC;CACF;AAfD,4BAeC"}

package/build/errors_OLD/authentication-error.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"authentication-error.d.ts","sourceRoot":"","sources":["../../src/errors_OLD/authentication-error.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAE1C,qBAAa,mBAAoB,SAAQ,KAAK;IAE5C,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAkC,EAAE,IAAI,GAAE,MAA2C;CAK3G"}

package/build/errors_OLD/authentication-error.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"authentication-error.js","sourceRoot":"","sources":["../../src/errors_OLD/authentication-error.ts"],"names":[],"mappings":";;;AAEA,MAAa,mBAAoB,SAAQ,KAAK;IAI5C,YAAY,UAAkB,yBAAyB,EAAE,OAAe,kCAAkC;QAExG,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CACF;AATD,kDASC"}

package/build/errors_OLD/custom-error.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"custom-error.d.ts","sourceRoot":"","sources":["../../src/errors_OLD/custom-error.ts"],"names":[],"mappings":"AAAA,8BAAsB,WAAY,SAAQ,KAAK;IAE7C,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;gBAEhB,OAAO,EAAE,MAAM;IAO3B,QAAQ,CAAC,eAAe,IAAI;QAAE,OAAO,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAA;KAAE,EAAE;CAClE"}

package/build/errors_OLD/custom-error.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"custom-error.js","sourceRoot":"","sources":["../../src/errors_OLD/custom-error.ts"],"names":[],"mappings":";;;AAAA,MAAsB,WAAY,SAAQ,KAAK;IAI7C,YAAY,OAAe;QAEzB,KAAK,CAAC,OAAO,CAAC,CAAC;QAEf,MAAM,CAAC,cAAc,CAAC,IAAI,EAAE,WAAW,CAAC,SAAS,CAAC,CAAC;IACrD,CAAC;CAGF;AAZD,kCAYC"}

package/build/errors_OLD/forbidden-error.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"forbidden-error.d.ts","sourceRoot":"","sources":["../../src/errors_OLD/forbidden-error.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAE1C,qBAAa,cAAe,SAAQ,KAAK;IAEvC,UAAU,EAAE,SAAS,CAAC;gBAEV,OAAO,GAAE,MAAoB,EAAE,IAAI,GAAE,MAA8C;CAKhG"}

package/build/errors_OLD/forbidden-error.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"forbidden-error.js","sourceRoot":"","sources":["../../src/errors_OLD/forbidden-error.ts"],"names":[],"mappings":";;;AAEA,MAAa,cAAe,SAAQ,KAAK;IAIvC,YAAY,UAAkB,WAAW,EAAE,OAAe,qCAAqC;QAE7F,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,UAAU,GAAG,EAAE,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,CAAC;IACxC,CAAC;CACF;AATD,wCASC"}

package/build/errors_OLD/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/errors_OLD/index.ts"],"names":[],"mappings":"AAAA,cAAc,aAAa,CAAC;AAC5B,cAAc,wBAAwB,CAAC;AACvC,cAAc,mBAAmB,CAAC;AAClC,cAAc,gBAAgB,CAAC"}

package/build/errors_OLD/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/errors_OLD/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;AAAA,8CAA4B;AAC5B,yDAAuC;AACvC,oDAAkC;AAClC,iDAA+B"}

package/build/index.d.ts

@@ -1,7 +1,8 @@
 export * from './constants';
 export * from './enums';
-export * from './models';
-export * from './types';
+export * from './omics/models';
+export * from './omics/types';
 export * from './interfaces';
+export * from './types';
 export * from './utils';
 //# sourceMappingURL=index.d.ts.map

package/build/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,cAAc,aAAa,CAAC;AAC5B,cAAc,SAAS,CAAC;AACxB,cAAc,UAAU,CAAC;AACzB,cAAc,SAAS,CAAC;AACxB,cAAc,cAAc,CAAC;AAC7B,cAAc,SAAS,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,cAAc,aAAa,CAAC;AAC5B,cAAc,SAAS,CAAC;AACxB,cAAc,gBAAgB,CAAC;AAC/B,cAAc,eAAe,CAAC;AAC9B,cAAc,cAAc,CAAC;AAC7B,cAAc,SAAS,CAAC;AACxB,cAAc,SAAS,CAAC"}

package/build/index.js

@@ -16,8 +16,9 @@ var __exportStar = (this && this.__exportStar) || function(m, exports) {
 Object.defineProperty(exports, "__esModule", { value: true });
 __exportStar(require("./constants"), exports);
 __exportStar(require("./enums"), exports);
-__exportStar(require("./models"), exports);
-__exportStar(require("./types"), exports);
+__exportStar(require("./omics/models"), exports);
+__exportStar(require("./omics/types"), exports);
 __exportStar(require("./interfaces"), exports);
+__exportStar(require("./types"), exports);
 __exportStar(require("./utils"), exports);
 //# sourceMappingURL=index.js.map

package/build/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;AAAA,8CAA4B;AAC5B,0CAAwB;AACxB,2CAAyB;AACzB,0CAAwB;AACxB,+CAA6B;AAC7B,0CAAwB"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;AAAA,8CAA4B;AAC5B,0CAAwB;AACxB,iDAA+B;AAC/B,gDAA8B;AAC9B,+CAA6B;AAC7B,0CAAwB;AACxB,0CAAwB"}

package/build/interfaces.d.ts

@@ -1,4 +1,5 @@
 import { SecurityLogLevel } from './enums';
+import { BaseDBItem } from './types';
 export type NxCallback<T> = (err: Error | null, res?: T) => void;
 export interface SecurityLogData {
     userId: string;
@@ -12,9 +13,6 @@ export interface EmailResult {
     success: boolean;
     statusCode?: number;
 }
-export type BaseDBItem = {
-    id?: string;
-};
 export interface BaseEntity extends BaseDBItem {
     code?: string;
     name?: string;

package/build/interfaces.d.ts.map

@@ -1 +1 @@
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package/build/interfaces.js.map

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+{"version":3,"file":"interfaces.js","sourceRoot":"","sources":["../src/interfaces.ts"],"names":[],"mappings":";;;AA2CA,MAAsB,QAAQ;CAK7B;AALD,4BAKC;AAoBD,mCAAmC;AACnC,8BAA8B;AAC9B,yBAAyB;AACzB,4DAA4D;AAC5D,4BAA4B;AAC5B,4BAA4B;AAC5B,IAAI"}

package/build/omics/models/genotype.d.ts.map

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package/build/omics/models/genotype.js.map

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package/build/omics/models/index.d.ts.map

@@ -0,0 +1 @@
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package/build/omics/models/index.js.map

@@ -0,0 +1 @@
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package/build/omics/models/sample.d.ts.map

@@ -0,0 +1 @@
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package/build/omics/models/sample.js.map

@@ -0,0 +1 @@
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package/build/omics/models/variant.d.ts.map

@@ -0,0 +1 @@
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package/build/omics/models/variant.js.map

@@ -0,0 +1 @@
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package/build/{types → omics/types}/genotype.d.ts

@@ -1,4 +1,4 @@
-import { BaseDBItem } from '../interfaces';
+import { BaseDBItem } from '../../types';
 export interface IGenotype extends BaseDBItem {
     variantId: string;
     sampleId: string;

package/build/omics/types/genotype.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"genotype.d.ts","sourceRoot":"","sources":["../../../src/omics/types/genotype.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAA;AAExC,MAAM,WAAW,SAAU,SAAQ,UAAU;IAC3C,SAAS,EAAW,MAAM,CAAC;IAC3B,QAAQ,EAAY,MAAM,CAAC;IAC3B,kBAAkB,EAAE,MAAM,CAAC;IAC3B,EAAE,EAAkB,MAAM,CAAC;IAC3B,GAAG,EAAiB,MAAM,CAAC;IAC3B,EAAE,EAAkB,MAAM,CAAC;IAC3B,OAAO,EAAa,MAAM,EAAE,CAAC;CAC9B"}

package/build/{types → omics/types}/genotype.js.map

@@ -1 +1 @@
-{"version":3,"file":"genotype.js","sourceRoot":"","sources":["../../src/types/genotype.ts"],"names":[],"mappings":""}
+{"version":3,"file":"genotype.js","sourceRoot":"","sources":["../../../src/omics/types/genotype.ts"],"names":[],"mappings":""}

package/build/omics/types/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/omics/types/index.ts"],"names":[],"mappings":"AAAA,cAAc,YAAY,CAAC;AAC3B,cAAc,UAAU,CAAC;AACzB,cAAc,WAAW,CAAC"}

package/build/omics/types/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/omics/types/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;AAAA,6CAA2B;AAC3B,2CAAyB;AACzB,4CAA0B"}

package/build/{types → omics/types}/sample.d.ts

@@ -1,4 +1,4 @@
-import { BaseDBItem } from '../interfaces';
+import { BaseDBItem } from '../../types';
 export interface ISample extends BaseDBItem {
     biobankSampleId: string;
     sequencingSampleId: string;

package/build/omics/types/sample.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"sample.d.ts","sourceRoot":"","sources":["../../../src/omics/types/sample.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAA;AAExC,MAAM,WAAW,OAAQ,SAAQ,UAAU;IACzC,eAAe,EAAK,MAAM,CAAC;IAC3B,kBAAkB,EAAE,MAAM,CAAC;IAC3B,QAAQ,EAAY,kBAAkB,CAAC;CACxC;AAED,MAAM,WAAW,kBAAkB;IACjC,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAI,MAAM,CAAC;IAClB,OAAO,EAAI,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB"}

package/build/{types → omics/types}/sample.js.map

@@ -1 +1 @@
-{"version":3,"file":"sample.js","sourceRoot":"","sources":["../../src/types/sample.ts"],"names":[],"mappings":""}
+{"version":3,"file":"sample.js","sourceRoot":"","sources":["../../../src/omics/types/sample.ts"],"names":[],"mappings":""}

package/build/{types → omics/types}/variant.d.ts

@@ -1,4 +1,4 @@
-import { BaseDBItem } from '../interfaces';
+import { BaseDBItem } from '../../types';
 export interface IVariant extends BaseDBItem {
     variantId: string;
     chrom: string;

package/build/omics/types/variant.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"variant.d.ts","sourceRoot":"","sources":["../../../src/omics/types/variant.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAA;AAExC,MAAM,WAAW,QAAS,SAAQ,UAAU;IAC1C,SAAS,EAAO,MAAM,CAAC;IACvB,KAAK,EAAW,MAAM,CAAC;IACvB,GAAG,EAAa,MAAM,CAAC;IACvB,GAAG,EAAa,MAAM,CAAC;IACvB,GAAG,EAAa,MAAM,EAAE,CAAC;IACzB,IAAI,EAAY,MAAM,CAAC;IACvB,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAK,iBAAiB,CAAC;CACnC;AAED,MAAM,WAAW,iBAAiB;IAChC,IAAI,EAAa,MAAM,CAAC;IACxB,WAAW,EAAM,MAAM,CAAC;IACxB,UAAU,EAAO,MAAM,CAAC;IACxB,KAAK,EAAY,MAAM,CAAC;IACxB,KAAK,EAAY,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,MAAM,EAAW,MAAM,CAAC;IACxB,IAAI,EAAa,MAAM,CAAC;CACzB"}

package/build/{types → omics/types}/variant.js.map

@@ -1 +1 @@
-{"version":3,"file":"variant.js","sourceRoot":"","sources":["../../src/types/variant.ts"],"names":[],"mappings":""}
+{"version":3,"file":"variant.js","sourceRoot":"","sources":["../../../src/omics/types/variant.ts"],"names":[],"mappings":""}

package/build/types.d.ts

@@ -0,0 +1,67 @@
+import { Mongoose } from 'mongoose';
+import { Algorithm } from 'jsonwebtoken';
+import { Request, Response, Express, NextFunction } from 'express';
+import { AppStatus } from './enums';
+import { AppObject } from './interfaces';
+export type DateRage = {
+    from?: Date;
+    to?: Date;
+    eq?: Date;
+};
+export type BaseDBItem = {
+    id?: string;
+};
+export type AppData = {
+    app?: Express;
+    logger: any;
+    prodMode: boolean;
+    status?: AppStatus;
+    dataScr?: string;
+    mongoose?: Mongoose;
+    config: AppConfig;
+};
+export type AppConfig = {
+    endpoint: AppEndpoint;
+    jwt: AppJwt;
+    msg: AppMessages;
+    mongo: AppMongoDB;
+    logging: AppLogging;
+};
+export type AppMongoDB = {
+    auth?: {
+        us: string;
+        pw: string;
+    };
+    dbname?: string;
+    host?: string;
+    port?: string;
+    protocol?: string;
+    options?: AppObject;
+    ssl?: boolean;
+};
+export type AppLogging = {
+    format?: string;
+    dir?: string;
+    filename?: string;
+};
+export type AppMessages = {
+    servers?: string | string[];
+    clientId?: string;
+    clientName?: string;
+    ackWait?: number;
+    maxDeliver?: number;
+};
+export type AppEndpoint = {
+    rest?: string;
+    graphql?: string;
+    graphqlWs?: string;
+    ws?: boolean;
+    port?: number;
+};
+export type AppJwt = {
+    secret?: string;
+    algorithm?: Algorithm;
+    duration?: string;
+};
+export type AsyncRequestHandler = (req: Request, res: Response, next: NextFunction) => Promise<void>;
+//# sourceMappingURL=types.d.ts.map

package/build/types.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAoC,UAAU,CAAC;AAClE,OAAO,EAAE,SAAS,EAAE,MAAmC,cAAc,CAAC;AACtE,OAAO,EAAE,OAAO,EAAC,QAAQ,EAAC,OAAO,EAAE,YAAY,EAAE,MAAM,SAAS,CAAC;AACjE,OAAO,EAAE,SAAS,EAAE,MAAmC,SAAS,CAAC;AACjE,OAAO,EAAE,SAAS,EAAE,MAAmC,cAAc,CAAC;AAEtE,MAAM,MAAM,QAAQ,GAAG;IACrB,IAAI,CAAC,EAAE,IAAI,CAAC;IACZ,EAAE,CAAC,EAAI,IAAI,CAAC;IACZ,EAAE,CAAC,EAAI,IAAI,CAAC;CACb,CAAA;AAED,MAAM,MAAM,UAAU,GAAG;IACvB,EAAE,CAAC,EAAE,MAAM,CAAC;CACb,CAAA;AAED,MAAM,MAAM,OAAO,GAAG;IACpB,GAAG,CAAC,EAAW,OAAO,CAAC;IACvB,MAAM,EAAS,GAAG,CAAC;IACnB,QAAQ,EAAO,OAAO,CAAC;IACvB,MAAM,CAAC,EAAQ,SAAS,CAAC;IACzB,OAAO,CAAC,EAAO,MAAM,CAAC;IACtB,QAAQ,CAAC,EAAM,QAAQ,CAAC;IACxB,MAAM,EAAS,SAAS,CAAC;CAC1B,CAAA;AAED,MAAM,MAAM,SAAS,GAAG;IACtB,QAAQ,EAAE,WAAW,CAAC;IACtB,GAAG,EAAO,MAAM,CAAC;IACjB,GAAG,EAAO,WAAW,CAAC;IACtB,KAAK,EAAK,UAAU,CAAC;IACrB,OAAO,EAAG,UAAU,CAAC;CACtB,CAAA;AAED,MAAM,MAAM,UAAU,GAAG;IACvB,IAAI,CAAC,EAAM;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAC;KAAE,CAAC;IACvC,MAAM,CAAC,EAAI,MAAM,CAAC;IAClB,IAAI,CAAC,EAAM,MAAM,CAAC;IAClB,IAAI,CAAC,EAAM,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,OAAO,CAAC,EAAG,SAAS,CAAC;IACrB,GAAG,CAAC,EAAO,OAAO,CAAC;CACpB,CAAA;AAED,MAAM,MAAM,UAAU,GAAG;IACvB,MAAM,CAAC,EAAI,MAAM,CAAC;IAClB,GAAG,CAAC,EAAO,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;CACnB,CAAA;AAED,MAAM,MAAM,WAAW,GAAG;IACxB,OAAO,CAAC,EAAK,MAAM,GAAG,MAAM,EAAE,CAAC;IAC/B,QAAQ,CAAC,EAAI,MAAM,CAAC;IACpB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,OAAO,CAAC,EAAK,MAAM,CAAC;IACpB,UAAU,CAAC,EAAE,MAAM,CAAC;CACrB,CAAA;AAED,MAAM,MAAM,WAAW,GAAG;IACxB,IAAI,CAAC,EAAO,MAAM,CAAC;IACnB,OAAO,CAAC,EAAI,MAAM,CAAC;IACnB,SAAS,CAAC,EAAE,MAAM,CAAA;IAClB,EAAE,CAAC,EAAS,OAAO,CAAC;IACpB,IAAI,CAAC,EAAO,MAAM,CAAC;CACpB,CAAA;AAED,MAAM,MAAM,MAAM,GAAG;IACnB,MAAM,CAAC,EAAK,MAAM,CAAC;IACnB,SAAS,CAAC,EAAE,SAAS,CAAC;IACtB,QAAQ,CAAC,EAAG,MAAM,CAAC;CACpB,CAAA;AAED,MAAM,MAAM,mBAAmB,GAAG,CAChC,GAAG,EAAE,OAAO,EACZ,GAAG,EAAE,QAAQ,EACb,IAAI,EAAE,YAAY,KACf,OAAO,CAAC,IAAI,CAAC,CAAC"}

package/build/types.js

@@ -0,0 +1,3 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=types.js.map

package/build/types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":""}

package/build/utils/express.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"express.d.ts","sourceRoot":"","sources":["../../src/utils/express.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,YAAY,EAAE,OAAO,EAAE,MAAU,SAAS,CAAC;AAEvE,OAAO,EAAE,eAAe,EAAE,MAAM,EAAE,MAAM,EAAE,MAAmB,mBAAmB,CAAC;AACjF,OAAO,EAAE,iBAAiB,EAAE,MAAiC,0CAA0C,CAAC;AAMxG;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,MAAM,CAAC,iBAAiB,CAAC,EAAE,cAAc,IAAI,KAAK,MAAM,CAAC,eAAe,CAAC,EAAE,KAAK,OAAO,4BAAQ,IAE5H,KAAK,OAAO,EAAE,KAAK,QAAQ,EAAE,MAAM,YAAY,UAYxD;AAED;;;;;;GAMG;AACH,wBAAgB,gBAAgB,CAAC,GAAG,EAAE,QAAQ,EAAE,MAAM,GAAE,MAAY,EAAE,OAAO,GAAE,MAAW,QAMzF;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,YAAY,CAAC,OAAO,GAAE,MAAM,EAAO,EAAE,OAAO,GAAE,MAA6B,GAAG,OAAO,CAcpG;AAoBD;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,KAAK,CAAC,EAAE,MAAM,EAAE,EAAE,SAAS,CAAC,EAAE,MAAM,IAEtD,KAAK,OAAO,EAAE,KAAK,QAAQ,EAAE,MAAM,YAAY,UAkCxD"}
+{"version":3,"file":"express.d.ts","sourceRoot":"","sources":["../../src/utils/express.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,YAAY,EAAE,OAAO,EAAE,MAAM,SAAS,CAAC;AAEnE,OAAO,EAAE,eAAe,EAAE,MAAM,EAAE,MAAM,EAAE,MAAe,mBAAmB,CAAC;AAC7E,OAAO,EAAE,iBAAiB,EAAE,MAA6B,0CAA0C,CAAC;AAKpG;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,MAAM,CAAC,iBAAiB,CAAC,EAAE,cAAc,IAAI,KAAK,MAAM,CAAC,eAAe,CAAC,EAAE,KAAK,OAAO,4BAAQ,IAE5H,KAAK,OAAO,EAAE,KAAK,QAAQ,EAAE,MAAM,YAAY,UAYxD;AAED;;;;;;GAMG;AACH,wBAAgB,gBAAgB,CAAC,GAAG,EAAE,QAAQ,EAAE,MAAM,GAAE,MAAY,EAAE,OAAO,GAAE,MAAW,QAMzF;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,YAAY,CAAC,OAAO,GAAE,MAAM,EAAO,EAAE,OAAO,GAAE,MAA6B,GAAG,OAAO,CAcpG;AAoBD;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,KAAK,CAAC,EAAE,MAAM,EAAE,EAAE,SAAS,CAAC,EAAE,MAAM,IAEtD,KAAK,OAAO,EAAE,KAAK,QAAQ,EAAE,MAAM,YAAY,UAkCxD"}

package/build/utils/express.js

@@ -11,8 +11,7 @@ const http_errors_1 = __importDefault(require("http-errors"));
 const express_validator_1 = require("express-validator");
 const constants_1 = require("../constants");
 const functs_1 = require("./functs");
-const authentication_error_1 = require("../errors/authentication-error");
-const forbidden_error_1 = require("../errors/forbidden-error");
+const errors_1 = require("../errors");
 /**
  *
  * @param schema
@@ -89,7 +88,7 @@ function authHandler(roles, condition) {
         const user = (0, functs_1.getAttr)(req, 'context.user');
         if (!user) {
             sendJSONResponse(res, 401, constants_1.RES_CODE.AUTH_REQUIRED);
-            next(new authentication_error_1.AuthenticationError('messages.authentication.required'));
+            next(new errors_1.AuthenticationError('messages.authentication.required'));
             return;
         }
         if (roles) {
@@ -105,7 +104,7 @@ function authHandler(roles, condition) {
             }
             if (!hasRoles) {
                 sendJSONResponse(res, 401, constants_1.RES_CODE.FORBIDDEN);
-                throw new forbidden_error_1.ForbiddenError('messages.authorization.failed');
+                throw new errors_1.ForbiddenError('messages.authorization.failed');
             }
         }
         next();

package/build/utils/express.js.map

@@ -1 +1 @@
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+{"version":3,"file":"express.js","sourceRoot":"","sources":["../../src/utils/express.ts"],"names":[],"mappings":";;;;;AAeA,wCAcC;AASD,4CAMC;AAaD,oCAcC;AAyBD,kCAoCC;AApID,8DAAuE;AAEvE,yDAA6E;AAG7E,4CAAwE;AACxE,qCAAoE;AACpE,sCAAqE;AAErE;;;;;GAKG;AACH,SAAgB,cAAc,CAAC,MAAiC,EAAE,iBAAiB,CAAC,GAA4B,EAAE,GAAY,EAAE,EAAE,CAAC,GAAG;IAEpI,OAAO,CAAC,GAAY,EAAE,GAAa,EAAE,IAAkB,EAAE,EAAE;QAEzD,IAAA,+BAAW,EAAC,MAAM,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,GAAG,EAAE,EAAE;YAExC,MAAM,MAAM,GAAG,IAAA,oCAAgB,EAAC,GAAG,CAAC,CAAC;YAErC,IAAI,MAAM,CAAC,OAAO,EAAE;gBAClB,OAAO,IAAI,EAAE,CAAC;YAEhB,GAAG,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,cAAc,CAAC,MAAM,EAAE,GAAG,CAAC,CAAC,CAAC;QACpD,CAAC,CAAC,CAAC;IACL,CAAC,CAAA;AACH,CAAC;AAED;;;;;;GAMG;AACH,SAAgB,gBAAgB,CAAC,GAAa,EAAE,SAAiB,GAAG,EAAE,UAAkB,EAAE;IAExF,IAAI,CAAC,GAAG;QAAE,OAAO;IAEjB,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IACnB,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;AACpB,CAAC;AAED;;;;;;;;;;GAUG;AACH,SAAgB,YAAY,CAAC,UAAoB,EAAE,EAAE,UAAkB,oBAAoB;IAEzF,MAAM,iBAAiB,GAAG,uBAAuB,CAAC,OAAO,CAAC,CAAC;IAE3D,OAAO,CAAC,OAAgB,EAAE,QAAkB,EAAE,IAAkB,EAAE,EAAE;QAElE,IAAI,CAAC,iBAAiB,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,EAAE,CAAC;YAE9D,QAAQ,CAAC,MAAM,CAAC,OAAO,EAAE,iBAAiB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;YACvD,OAAO,IAAI,CAAC,IAAA,qBAAS,EAAC,GAAG,EAAE,OAAO,CAAC,CAAC,CAAC;QACvC,CAAC;QAED,IAAI,EAAE,CAAC;IACT,CAAC,CAAC;AACJ,CAAC;AAAA,CAAC;AAEF;;;;;;;;GAQG;AACH,SAAS,uBAAuB,CAAC,OAAiB;IAEhD,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC;QACzB,OAAO,EAAE,CAAC;IAEZ,OAAO,OAAO,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,OAAO,MAAM,KAAK,QAAQ,CAAC;SAC5C,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,CAAC;AACrD,CAAC;AAED;;;;GAIG;AACH,SAAgB,WAAW,CAAC,KAAgB,EAAE,SAAkB;IAE9D,OAAO,CAAC,GAAY,EAAE,GAAa,EAAE,IAAkB,EAAE,EAAE;QAEzD,MAAM,IAAI,GAAG,IAAA,gBAAO,EAAC,GAAG,EAAE,cAAc,CAAC,CAAC;QAE1C,IAAI,CAAC,IAAI,EAAE,CAAC;YAEV,gBAAgB,CAAC,GAAG,EAAE,GAAG,EAAE,oBAAQ,CAAC,aAAa,CAAC,CAAC;YACnD,IAAI,CAAC,IAAI,4BAAmB,CAAC,kCAAkC,CAAC,CAAC,CAAC;YAClE,OAAO;QACT,CAAC;QAED,IAAI,KAAK,EAAE,CAAC;YAEV,IAAI,QAAQ,GAAG,IAAI,CAAC;YAEpB,QAAO,SAAS,EAAE,CAAC;gBACjB,KAAK,IAAI;oBACP,QAAQ,GAAG,KAAK,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;oBAC9D,MAAM;gBACR,KAAK,IAAI,CAAC;gBACV;oBACE,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;oBAC7D,MAAM;YACV,CAAC;YAED,IAAI,CAAC,QAAQ,EAAE,CAAC;gBAEd,gBAAgB,CAAC,GAAG,EAAE,GAAG,EAAE,oBAAQ,CAAC,SAAS,CAAC,CAAC;gBAC/C,MAAM,IAAI,uBAAc,CAAC,+BAA+B,CAAC,CAAC;YAC5D,CAAC;QACH,CAAC;QAED,IAAI,EAAE,CAAC;IACT,CAAC,CAAA;AACH,CAAC"}

package/build/utils/functs.d.ts

@@ -1,4 +1,18 @@
 import { AppObject, BaseUser } from '../interfaces';
+import { AppData, AppMongoDB } from '../types';
+/**
+ * Init main application configuration stored in NxFrame APP Singleton
+ */
+export declare function initConfig(dir: string, appData: AppData): Promise<AppData>;
+/**
+ * Init connection to MongoDB application database
+ */
+export declare function buildMongoDBConfig(): Promise<AppMongoDB>;
+/**
+ * Reads application environment
+ * @param dir
+ */
+export declare function readEnv(dir: string): void;
 /**
  *
  * @param path

package/build/utils/functs.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"functs.d.ts","sourceRoot":"","sources":["../../src/utils/functs.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAoBpD;;;;GAIG;AACH,wBAAsB,UAAU,CAAC,IAAI,GAAE,MAAW,GAAG,OAAO,CAAC,OAAO,CAAC,CAYpE;AAED;;;;GAIG;AACH,wBAAgB,OAAO,CAAC,MAAM,EAAE,GAAG,EAAE,IAAI,EAAE,MAAM,GAAG,GAAG,CAGtD;AAED;;;;;GAKG;AACH,wBAAgB,OAAO,CAAC,MAAM,EAAE,GAAG,EAAE,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,GAAG,GAAG,GAAG,CAGlE;AAED;;;GAGG;AACH,wBAAgB,kBAAkB,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,EAAE,CAgBvE;AAED;;;;;;GAMG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,SAAS,EAAE,IAAI,CAAC,EAAE,QAAQ,EAAE,oBAAoB,UAAQ,GAAG,IAAI,CAc9F;AAED;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,MAAM,GAAG,SAAS,CAO7D;AAED;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAmBjD"}
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package/build/utils/functs.js

@@ -3,6 +3,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
+exports.initConfig = initConfig;
+exports.buildMongoDBConfig = buildMongoDBConfig;
+exports.readEnv = readEnv;
 exports.pathExists = pathExists;
 exports.getAttr = getAttr;
 exports.setAttr = setAttr;
@@ -14,6 +17,71 @@ const lodash_1 = __importDefault(require("lodash"));
 const node_fs_1 = __importDefault(require("node:fs"));
 const node_path_1 = __importDefault(require("node:path"));
 const validator_1 = __importDefault(require("validator"));
+const dotenv_1 = require("dotenv");
+/**
+ * Init main application configuration stored in NxFrame APP Singleton
+ */
+async function initConfig(dir, appData) {
+    readEnv(dir);
+    const APP = appData;
+    // Application endpoints (REST/graphQL) configuration
+    APP.config.endpoint = {
+        rest: process.env.REST_ENDPOINT ?? '/api/rest',
+        port: process.env.SERVER_PORT ? Number.parseInt(process.env.SERVER_PORT) : 4000
+    };
+    // MongoDB connection configuration
+    APP.config.mongo = await buildMongoDBConfig();
+    // Logging configuration
+    APP.config.logging = {
+        dir: process.env.LOG_DIR ?? './logs',
+        filename: `${process.env.LOG_DIR ?? './logs'}/omics`
+    };
+    // Application secret (to manage main string encryption on data stored)
+    APP.dataScr = process.env.SECRET;
+    return APP;
+}
+/**
+ * Init connection to MongoDB application database
+ */
+async function buildMongoDBConfig() {
+    const config = {
+        protocol: process.env.MONGO_PROTOCOL ?? 'mongodb',
+        dbname: (process.env.MONGO_DBNAME ?? process.env.APP_NAME) ?? 'app',
+        host: process.env.MONGO_HOST ?? 'localhost',
+        port: process.env.MONGO_PORT,
+        auth: { ...JSON.parse(process.env.MONGO_AUTH || '{}') },
+        options: JSON.parse(process.env.MONGO_OPTS ?? '{}'),
+        ssl: !!process.env.MONGO_USE_SSL
+    };
+    if (await pathExists(config.auth?.us))
+        config.auth.us = node_fs_1.default.readFileSync(config.auth.us).toString().trim();
+    if (await pathExists(config.auth?.pw))
+        config.auth.pw = node_fs_1.default.readFileSync(config.auth.pw).toString().trim();
+    return config;
+}
+/**
+ * Reads application environment
+ * @param dir
+ */
+function readEnv(dir) {
+    process.env.NODE_ENV = process.env.NODE_ENV ?? 'development';
+    (0, dotenv_1.configDotenv)({ path: process.env.NODE_ENV === 'production' ? `${dir}/app.prod.env` : `${dir}/app.env` });
+    process.env.APP_NAME = process.env.APP_NAME ?? 'nxapp';
+    process.env.SERVER_PORT = process.env.SERVER_PORT ?? '5000';
+    process.env.LOG_DIR = process.env.LOG_DIR ?? './logs';
+    process.env.MORGAN_FORMAT = process.env.MORGAN_FORMAT ?? '';
+    process.env.JWT_ALGORITHM = process.env.JWT_ALGORITHM ?? 'HS512';
+    process.env.JWT_SECRET = process.env.JWT_SECRET ?? '0a6b944d-d2fb-46fc-a85e-0295c986cd9f';
+    process.env.MONGO_SECRET = process.env.MONGO_SECRET ?? '0a6b944d-d2fb-46fc-a85e-0295c986cd9f';
+    process.env.MONGO_HOST = process.env.MONGO_HOST ?? 'localhost';
+    process.env.MONGO_DBNAME = process.env.MONGO_DBNAME ?? process.env.APP_NAME ?? 'nxapp';
+    process.env.MONGO_AUTH = process.env.MONGO_AUTH ?? '';
+    process.env.MONGO_OPTS = process.env.MONGO_OPTS ?? '{}';
+    process.env.BASE_URL = process.env.BASE_URL ?? 'http://localhost:4200';
+    process.env.REST_ENDPOINT = process.env.REST_ENDPOINT ?? '/api/rest';
+    process.env.ROOT_DIR = dir;
+    process.env.SECRET = process.env.SECRET ?? 'aaa';
+}
 // /**
 //  * 
 //  * @param item 

package/build/utils/functs.js.map

@@ -1 +1 @@
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+{"version":3,"file":"functs.js","sourceRoot":"","sources":["../../src/utils/functs.ts"],"names":[],"mappings":";;;;;AAWA,gCAyBC;AAKD,gDAgBC;AAMD,0BAuBC;AAuBD,gCAYC;AAOD,0BAGC;AAQD,0BAGC;AAMD,gDAgBC;AASD,8BAcC;AAOD,8BAOC;AAOD,kCAmBC;AAnOD,oDAA6C;AAC7C,sDAA8C;AAC9C,0DAAgD;AAChD,0DAAgD;AAChD,mCAA6C;AAI7C;;GAEG;AACI,KAAK,UAAU,UAAU,CAAC,GAAW,EAAE,OAAgB;IAE5D,OAAO,CAAC,GAAG,CAAC,CAAC;IAEb,MAAM,GAAG,GAAG,OAAO,CAAC;IAEpB,qDAAqD;IACrD,GAAG,CAAC,MAAM,CAAC,QAAQ,GAAG;QACpB,IAAI,EAAO,OAAO,CAAC,GAAG,CAAC,aAAa,IAAI,WAAW;QACnD,IAAI,EAAO,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC,QAAQ,CAAC,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,IAAI;KACrF,CAAC;IAEF,mCAAmC;IACnC,GAAG,CAAC,MAAM,CAAC,KAAK,GAAG,MAAM,kBAAkB,EAAE,CAAC;IAE9C,wBAAwB;IACxB,GAAG,CAAC,MAAM,CAAC,OAAO,GAAG;QACnB,GAAG,EAAO,OAAO,CAAC,GAAG,CAAC,OAAO,IAAU,QAAQ;QAC/C,QAAQ,EAAE,GAAG,OAAO,CAAC,GAAG,CAAC,OAAO,IAAO,QAAQ,QAAQ;KACxD,CAAC;IAEF,uEAAuE;IACvE,GAAG,CAAC,OAAO,GAAG,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC;IAEjC,OAAO,GAAG,CAAC;AACb,CAAC;AAED;;GAEG;AACI,KAAK,UAAU,kBAAkB;IAEtC,MAAM,MAAM,GAAe;QACzB,QAAQ,EAAE,OAAO,CAAC,GAAG,CAAC,cAAc,IAAI,SAAS;QACjD,MAAM,EAAI,CAAC,OAAO,CAAC,GAAG,CAAC,YAAY,IAAK,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,IAAI,KAAK;QACtE,IAAI,EAAM,OAAO,CAAC,GAAG,CAAC,UAAU,IAAQ,WAAW;QACnD,IAAI,EAAM,OAAO,CAAC,GAAG,CAAC,UAAU;QAChC,IAAI,EAAM,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,UAAU,IAAI,IAAI,CAAC,EAAC;QAC1D,OAAO,EAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,UAAU,IAAI,IAAI,CAAC;QACpD,GAAG,EAAO,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,aAAa;KACtC,CAAC;IAEF,IAAI,MAAM,UAAU,CAAC,MAAM,CAAC,IAAI,EAAE,EAAE,CAAC;QAAE,MAAM,CAAC,IAAK,CAAC,EAAE,GAAG,iBAAE,CAAC,YAAY,CAAC,MAAM,CAAC,IAAK,CAAC,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,IAAI,EAAE,CAAC;IAC5G,IAAI,MAAM,UAAU,CAAC,MAAM,CAAC,IAAI,EAAE,EAAE,CAAC;QAAE,MAAM,CAAC,IAAK,CAAC,EAAE,GAAG,iBAAE,CAAC,YAAY,CAAC,MAAM,CAAC,IAAK,CAAC,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,IAAI,EAAE,CAAC;IAE5G,OAAO,MAAM,CAAC;AAChB,CAAC;AAED;;;GAGG;AACH,SAAgB,OAAO,CAAC,GAAW;IAEjC,OAAO,CAAC,GAAG,CAAC,QAAQ,GAAG,OAAO,CAAC,GAAG,CAAC,QAAQ,IAAI,aAAa,CAAC;IAE7D,IAAA,qBAAY,EAAC,EAAE,IAAI,EAAE,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,YAAY,CAAC,CAAC,CAAC,GAAG,GAAG,eAAe,CAAC,CAAC,CAAC,GAAG,GAAG,UAAU,EAAE,CAAC,CAAC;IAEzG,OAAO,CAAC,GAAG,CAAC,QAAQ,GAAc,OAAO,CAAC,GAAG,CAAC,QAAQ,IAAe,OAAO,CAAC;IAC7E,OAAO,CAAC,GAAG,CAAC,WAAW,GAAW,OAAO,CAAC,GAAG,CAAC,WAAW,IAAY,MAAM,CAAC;IAC5E,OAAO,CAAC,GAAG,CAAC,OAAO,GAAe,OAAO,CAAC,GAAG,CAAC,OAAO,IAAgB,QAAQ,CAAC;IAC9E,OAAO,CAAC,GAAG,CAAC,aAAa,GAAS,OAAO,CAAC,GAAG,CAAC,aAAa,IAAU,EAAE,CAAC;IACxE,OAAO,CAAC,GAAG,CAAC,aAAa,GAAS,OAAO,CAAC,GAAG,CAAC,aAAa,IAAU,OAAO,CAAC;IAC7E,OAAO,CAAC,GAAG,CAAC,UAAU,GAAY,OAAO,CAAC,GAAG,CAAC,UAAU,IAAa,sCAAsC,CAAC;IAC5G,OAAO,CAAC,GAAG,CAAC,YAAY,GAAU,OAAO,CAAC,GAAG,CAAC,YAAY,IAAW,sCAAsC,CAAC;IAC5G,OAAO,CAAC,GAAG,CAAC,UAAU,GAAY,OAAO,CAAC,GAAG,CAAC,UAAU,IAAa,WAAW,CAAC;IACjF,OAAO,CAAC,GAAG,CAAC,YAAY,GAAU,OAAO,CAAC,GAAG,CAAC,YAAY,IAAW,OAAO,CAAC,GAAG,CAAC,QAAQ,IAAI,OAAO,CAAC;IACrG,OAAO,CAAC,GAAG,CAAC,UAAU,GAAY,OAAO,CAAC,GAAG,CAAC,UAAU,IAAa,EAAE,CAAC;IACxE,OAAO,CAAC,GAAG,CAAC,UAAU,GAAY,OAAO,CAAC,GAAG,CAAC,UAAU,IAAa,IAAI,CAAC;IAE1E,OAAO,CAAC,GAAG,CAAC,QAAQ,GAAc,OAAO,CAAC,GAAG,CAAC,QAAQ,IAAe,uBAAuB,CAAC;IAE7F,OAAO,CAAC,GAAG,CAAC,aAAa,GAAS,OAAO,CAAC,GAAG,CAAC,aAAa,IAAU,WAAW,CAAC;IACjF,OAAO,CAAC,GAAG,CAAC,QAAQ,GAAc,GAAG,CAAC;IACtC,OAAO,CAAC,GAAG,CAAC,MAAM,GAAgB,OAAO,CAAC,GAAG,CAAC,MAAM,IAAiB,KAAK,CAAC;AAC7E,CAAC;AAED,MAAM;AACN,MAAM;AACN,kBAAkB;AAClB,eAAe;AACf,MAAM;AACN,6FAA6F;AAE7F,6CAA6C;AAE7C,cAAc;AACd,mBAAmB;AAEnB,kCAAkC;AAClC,gBAAgB;AAChB,IAAI;AAEJ;;;;GAIG;AACI,KAAK,UAAU,UAAU,CAAC,OAAe,EAAE;IAEhD,IAAI,CAAC,IAAI;QACP,OAAO,KAAK,CAAC;IAEf,IAAI,CAAC;QACH,MAAM,iBAAE,CAAC,QAAQ,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;QAC/B,OAAO,IAAI,CAAC;IACd,CAAC;IACD,MAAM,CAAC;QACL,OAAO,KAAK,CAAC;IACf,CAAC;AACH,CAAC;AAED;;;;GAIG;AACH,SAAgB,OAAO,CAAC,MAAW,EAAE,IAAY;IAE/C,OAAO,gBAAC,CAAC,GAAG,CAAC,MAAM,EAAE,IAAI,CAAC,CAAC;AAC7B,CAAC;AAED;;;;;GAKG;AACH,SAAgB,OAAO,CAAC,MAAW,EAAE,IAAY,EAAE,KAAU;IAE3D,OAAO,gBAAC,CAAC,GAAG,CAAC,MAAM,EAAE,IAAI,EAAE,KAAK,CAAC,CAAC;AACpC,CAAC;AAED;;;GAGG;AACH,SAAgB,kBAAkB,CAAC,GAAW,EAAE,KAAa;IAE3D,MAAM,SAAS,GAAa,EAAE,CAAC;IAC/B,MAAM,KAAK,GAAiB,iBAAE,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;IAEhD,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;QAEzB,MAAM,QAAQ,GAAG,mBAAI,CAAC,IAAI,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;QAEtC,IAAI,iBAAE,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC,WAAW,EAAE;YACrC,SAAS,CAAC,IAAI,CAAC,GAAG,kBAAkB,CAAC,QAAQ,EAAE,KAAK,CAAC,CAAC,CAAC,CAAC,gCAAgC;aACrF,IAAI,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC;YAClF,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,YAAY;IAC1C,CAAC;IAED,OAAO,SAAS,CAAC;AACnB,CAAC;AAED;;;;;;GAMG;AACH,SAAgB,SAAS,CAAC,IAAe,EAAE,IAAe,EAAE,oBAAoB,GAAG,KAAK;IAEtF,gDAAgD;IAEhD,8EAA8E;IAC9E,2DAA2D;IAC3D,YAAY;IAEZ,oCAAoC;IACpC,6DAA6D;IAE7D,8DAA8D;IAC9D,qCAAqC;IACrC,4CAA4C;AAC9C,CAAC;AAED;;;;GAIG;AACH,SAAgB,SAAS,CAAC,IAAe;IAEvC,OAAO,EAAE,CAAA;IACT,oCAAoC;IACpC,6DAA6D;IAE7D,mCAAmC;AACrC,CAAC;AAED;;;;GAIG;AACH,SAAgB,WAAW,CAAC,KAAa;IAEvC,IAAI,CAAC,mBAAS,CAAC,KAAK,CAAC,KAAK,EAAE;QAC1B,SAAS,EAAqB,CAAC,MAAM,EAAE,OAAO,CAAC;QAC/C,gBAA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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@nextage/omics-lib",
-  "version": "1.0.2",
+  "version": "1.0.6",
   "main": "./build/index.js",
   "types": "./build/index.d.ts",
   "files": [
@@ -51,6 +51,7 @@
     "openid-client": "^5.7.1",
     "passport": "^0.7.0",
     "passport-local": "^1.0.0",
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