@neurodock/cli 0.6.2 → 0.7.0

package/dist/assets/hooks/test_daemon_escape.py

@@ -0,0 +1,111 @@
+"""Tests for the M5 notification-text escape functions in neurodock_daemon.py.
+
+Security regression test: verify that shell-injection characters in title/
+message strings are stripped before interpolation into PowerShell and
+AppleScript command strings.  All of these characters would allow code
+execution if they reached the script interpreter unescaped.
+
+Collected under packages/ so the workspace-level pytest run picks them up.
+"""
+
+from __future__ import annotations
+
+import importlib.util
+import sys
+from pathlib import Path
+
+# ---------------------------------------------------------------------------
+# Import the daemon module from its asset path without installing it.
+# ---------------------------------------------------------------------------
+
+_DAEMON_PATH = Path(__file__).parent / "neurodock_daemon.py"
+
+_spec = importlib.util.spec_from_file_location("neurodock_daemon", _DAEMON_PATH)
+assert _spec is not None and _spec.loader is not None
+_mod = importlib.util.module_from_spec(_spec)
+sys.modules["neurodock_daemon"] = _mod
+_spec.loader.exec_module(_mod)  # type: ignore[union-attr]
+
+_escape_ps = _mod._escape_ps  # type: ignore[attr-defined]
+_escape_as = _mod._escape_as  # type: ignore[attr-defined]
+
+
+# ---------------------------------------------------------------------------
+# PowerShell escape tests
+# ---------------------------------------------------------------------------
+
+# PS strips backtick, $, (, ), {, }, ;, &, |, <, >, \, newlines.
+# Double-quote is backslash-escaped (NOT stripped) so the XML text node
+# value is preserved.
+_PS_STRIPPED_CHARS = "`$(){};&|<>\\\n\r"
+
+
+def test_escape_ps_strips_powershell_injection_chars() -> None:
+    """Listed PS-injection chars must be absent from the output."""
+    payload = _PS_STRIPPED_CHARS + "hello"
+    result = _escape_ps(payload)
+    for ch in _PS_STRIPPED_CHARS:
+        assert ch not in result, f"char {ch!r} survived _escape_ps"
+
+
+def test_escape_ps_double_quote_is_escaped_not_stripped() -> None:
+    """Double-quotes are backslash-escaped so the text node value is literal."""
+    result = _escape_ps('say "hello"')
+    # The escaped form must be present.
+    assert '\\"' in result
+    # And no bare (unescaped) double-quote must remain.
+    assert '"' not in result.replace('\\"', "")
+
+
+def test_escape_ps_newlines_removed() -> None:
+    result = _escape_ps("line1\nline2\r\nline3")
+    assert "\n" not in result
+    assert "\r" not in result
+
+
+def test_escape_ps_safe_text_passes_through() -> None:
+    safe = "NeuroDock — hyperfocus check: 90 min elapsed"
+    result = _escape_ps(safe)
+    # Em dash and alphanumerics survive unchanged.
+    assert "NeuroDock" in result
+    assert "90 min" in result
+
+
+# ---------------------------------------------------------------------------
+# AppleScript escape tests
+# ---------------------------------------------------------------------------
+
+# AS strips double-quote, backslash, &, |, ;, backtick, and newlines.
+# (AppleScript has no reliable backslash-quote escape, so " is stripped.)
+_AS_STRIPPED_CHARS = '"\\&|;`\n\r'
+
+
+def test_escape_as_strips_all_dangerous_chars() -> None:
+    """All listed AS-injection chars must be absent from the output."""
+    payload = _AS_STRIPPED_CHARS + "hello"
+    result = _escape_as(payload)
+    for ch in _AS_STRIPPED_CHARS:
+        assert ch not in result, f"char {ch!r} survived _escape_as"
+
+
+def test_escape_as_double_quote_is_stripped() -> None:
+    """AppleScript cannot reliably escape " inside a double-quoted literal —
+    the function strips it entirely so the resulting string is injection-safe."""
+    result = _escape_as('title "check"')
+    assert '"' not in result
+    # The safe surrounding text is preserved.
+    assert "title" in result
+    assert "check" in result
+
+
+def test_escape_as_newlines_removed() -> None:
+    result = _escape_as("line1\nline2\r\nline3")
+    assert "\n" not in result
+    assert "\r" not in result
+
+
+def test_escape_as_safe_text_passes_through() -> None:
+    safe = "NeuroDock — it is late night local (22:00). Save and stop."
+    result = _escape_as(safe)
+    assert "NeuroDock" in result
+    assert "22:00" in result

package/dist/commands/guardrail.d.ts

@@ -0,0 +1,18 @@
+interface StatusLine {
+    readonly label: string;
+    readonly ok: boolean;
+    readonly detail: string;
+}
+interface GuardrailStatusResult {
+    readonly lines: ReadonlyArray<StatusLine>;
+    readonly anyFailure: boolean;
+}
+export declare function collectGuardrailStatus(): GuardrailStatusResult;
+export interface GuardrailStatusOptions {
+    readonly print: (msg: string) => void;
+}
+export declare function runGuardrailStatus(opts: GuardrailStatusOptions): {
+    exitCode: number;
+};
+export {};
+//# sourceMappingURL=guardrail.d.ts.map

package/dist/commands/guardrail.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"guardrail.d.ts","sourceRoot":"","sources":["../../src/commands/guardrail.ts"],"names":[],"mappings":"AAqBA,UAAU,UAAU;IAClB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAC;IACrB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;CACzB;AAED,UAAU,qBAAqB;IAC7B,QAAQ,CAAC,KAAK,EAAE,aAAa,CAAC,UAAU,CAAC,CAAC;IAC1C,QAAQ,CAAC,UAAU,EAAE,OAAO,CAAC;CAC9B;AAuMD,wBAAgB,sBAAsB,IAAI,qBAAqB,CAY9D;AAED,MAAM,WAAW,sBAAsB;IACrC,QAAQ,CAAC,KAAK,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,IAAI,CAAC;CACvC;AAED,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,sBAAsB,GAAG;IAChE,QAAQ,EAAE,MAAM,CAAC;CAClB,CAmBA"}

package/dist/commands/guardrail.js

@@ -0,0 +1,223 @@
+/*
+ * SPDX-License-Identifier: AGPL-3.0-or-later
+ * Copyright (c) 2026 NeuroDock contributors.
+ *
+ * `neurodock guardrail status` — diagnostic readout of the proactive-
+ * guardrail wiring on the current machine. Read-only: never modifies any
+ * file.
+ *
+ * Why this command exists: 2026-05-26 silent-failure incident. The user
+ * coded for 6 hours and the substrate never fired a single break warning.
+ * Root cause: the Phase 3 daemon was never installed AND the Phase 1
+ * session file was in a degraded shape (`{tool_count: N}` only, no
+ * `started_at`), so the elapsed-time heuristic could not compute. With
+ * `guardrail status` the user can see at a glance which piece is missing
+ * before another long session goes silent.
+ */
+import { readFileSync, existsSync, statSync } from "node:fs";
+import { homedir, platform } from "node:os";
+import { join } from "node:path";
+import { execSync } from "node:child_process";
+function homeFile(...parts) {
+    return join(homedir(), ...parts);
+}
+function checkPhase1HookRegistered() {
+    const settingsPath = homeFile(".claude", "settings.json");
+    if (!existsSync(settingsPath)) {
+        return {
+            label: "Phase 1 hook (Claude Code)",
+            ok: false,
+            detail: `~/.claude/settings.json not found — run 'neurodock install-hooks'`,
+        };
+    }
+    try {
+        const raw = readFileSync(settingsPath, "utf8");
+        const parsed = JSON.parse(raw);
+        const text = JSON.stringify(parsed.hooks ?? {});
+        if (text.includes("neurodock_proactive_guardrail") ||
+            text.includes("proactive_guardrail.py")) {
+            return {
+                label: "Phase 1 hook (Claude Code)",
+                ok: true,
+                detail: "registered in ~/.claude/settings.json",
+            };
+        }
+        return {
+            label: "Phase 1 hook (Claude Code)",
+            ok: false,
+            detail: "settings.json present but no NeuroDock hook entries — run 'neurodock install-hooks'",
+        };
+    }
+    catch (cause) {
+        const msg = cause instanceof Error ? cause.message : "parse failed";
+        return {
+            label: "Phase 1 hook (Claude Code)",
+            ok: false,
+            detail: `could not read settings.json (${msg})`,
+        };
+    }
+}
+function checkSessionShape() {
+    const sessionPath = homeFile(".neurodock", "state", "guardrail-session.json");
+    if (!existsSync(sessionPath)) {
+        return {
+            label: "Session state shape",
+            ok: false,
+            detail: "no session state yet — open Claude Code and submit one prompt to bootstrap",
+        };
+    }
+    try {
+        const raw = readFileSync(sessionPath, "utf8");
+        const parsed = JSON.parse(raw);
+        if (typeof parsed.started_at !== "string") {
+            return {
+                label: "Session state shape",
+                ok: false,
+                detail: "missing 'started_at' (degraded shape) — the Phase 1 hook's defensive bootstrap will fix this on the next PreToolUse event",
+            };
+        }
+        return {
+            label: "Session state shape",
+            ok: true,
+            detail: `started_at=${parsed.started_at} tool_count=${String(parsed.tool_count ?? 0)}`,
+        };
+    }
+    catch (cause) {
+        const msg = cause instanceof Error ? cause.message : "parse failed";
+        return {
+            label: "Session state shape",
+            ok: false,
+            detail: `could not parse guardrail-session.json (${msg})`,
+        };
+    }
+}
+function checkDaemonScriptPresent() {
+    const daemonPath = homeFile(".neurodock", "hooks", "neurodock_daemon.py");
+    if (!existsSync(daemonPath)) {
+        return {
+            label: "Phase 3 daemon script",
+            ok: false,
+            detail: `not found at ${daemonPath} — run 'neurodock install-hooks --install-daemon'`,
+        };
+    }
+    return {
+        label: "Phase 3 daemon script",
+        ok: true,
+        detail: daemonPath,
+    };
+}
+function checkDaemonAutostart() {
+    if (platform() === "win32") {
+        try {
+            const out = execSync('reg query "HKCU\\Software\\Microsoft\\Windows\\CurrentVersion\\Run" /v NeuroDockGuardrail', {
+                encoding: "utf8",
+                stdio: ["ignore", "pipe", "ignore"],
+            });
+            if (out.includes("NeuroDockGuardrail")) {
+                return {
+                    label: "Daemon autostart (HKCU Run)",
+                    ok: true,
+                    detail: "registered",
+                };
+            }
+        }
+        catch {
+            // reg query failed = key not present
+        }
+        return {
+            label: "Daemon autostart (HKCU Run)",
+            ok: false,
+            detail: "not registered — run 'neurodock install-hooks --install-daemon'",
+        };
+    }
+    if (platform() === "darwin") {
+        const plistPath = homeFile("Library", "LaunchAgents", "com.neurodock.guardrail.plist");
+        if (existsSync(plistPath)) {
+            return {
+                label: "Daemon autostart (LaunchAgent)",
+                ok: true,
+                detail: plistPath,
+            };
+        }
+        return {
+            label: "Daemon autostart (LaunchAgent)",
+            ok: false,
+            detail: `not at ${plistPath} — run 'neurodock install-hooks --install-daemon'`,
+        };
+    }
+    const unitPath = homeFile(".config", "systemd", "user", "neurodock-guardrail.service");
+    if (existsSync(unitPath)) {
+        return {
+            label: "Daemon autostart (systemd --user)",
+            ok: true,
+            detail: unitPath,
+        };
+    }
+    return {
+        label: "Daemon autostart (systemd --user)",
+        ok: false,
+        detail: `not at ${unitPath} — run 'neurodock install-hooks --install-daemon'`,
+    };
+}
+function checkDaemonRunning() {
+    const logPath = homeFile(".neurodock", "state", "daemon-log.jsonl");
+    if (!existsSync(logPath)) {
+        return {
+            label: "Daemon liveness",
+            ok: false,
+            detail: "no daemon-log.jsonl — daemon has never ticked on this machine",
+        };
+    }
+    try {
+        const stats = statSync(logPath);
+        const ageMin = (Date.now() - stats.mtimeMs) / 60000;
+        if (ageMin > 15) {
+            return {
+                label: "Daemon liveness",
+                ok: false,
+                detail: `last log entry was ${Math.round(ageMin)} min ago — daemon may have crashed or been stopped`,
+            };
+        }
+        return {
+            label: "Daemon liveness",
+            ok: true,
+            detail: `last tick ${Math.round(ageMin)} min ago`,
+        };
+    }
+    catch (cause) {
+        const msg = cause instanceof Error ? cause.message : "stat failed";
+        return { label: "Daemon liveness", ok: false, detail: msg };
+    }
+}
+export function collectGuardrailStatus() {
+    const lines = [
+        checkPhase1HookRegistered(),
+        checkSessionShape(),
+        checkDaemonScriptPresent(),
+        checkDaemonAutostart(),
+        checkDaemonRunning(),
+    ];
+    return {
+        lines,
+        anyFailure: lines.some((line) => !line.ok),
+    };
+}
+export function runGuardrailStatus(opts) {
+    const result = collectGuardrailStatus();
+    opts.print("NeuroDock proactive-guardrail wiring status:");
+    opts.print("");
+    for (const line of result.lines) {
+        const tag = line.ok ? "OK     " : "MISSING";
+        opts.print(`  [${tag}] ${line.label}`);
+        opts.print(`            ${line.detail}`);
+    }
+    opts.print("");
+    if (result.anyFailure) {
+        opts.print("One or more pieces are missing. Run 'neurodock install-hooks --install-daemon' " +
+            "to wire everything in one step. Re-run 'neurodock guardrail status' afterwards.");
+        return { exitCode: 1 };
+    }
+    opts.print("All guardrail wiring present.");
+    return { exitCode: 0 };
+}
+//# sourceMappingURL=guardrail.js.map

package/dist/commands/guardrail.js.map

@@ -0,0 +1 @@
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package/dist/commands/init.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAGV,QAAQ,EACR,WAAW,EAEZ,MAAM,aAAa,CAAC;AACrB,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAWxC,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,IAAI,EAAE,QAAQ,CAAC;IACxB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;CAC1C;AAED,MAAM,WAAW,gBAAgB;IAC/B,qDAAqD;IACrD,QAAQ,CAAC,YAAY,CAAC,EAAE,UAAU,CAAC,OAAO,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;CACvD;AAED,wBAAsB,OAAO,CAC3B,OAAO,EAAE,WAAW,EACpB,IAAI,GAAE,gBAAqB,GAC1B,OAAO,CAAC,aAAa,CAAC,CAgHxB"}
+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAGV,QAAQ,EACR,WAAW,EAEZ,MAAM,aAAa,CAAC;AACrB,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAWxC,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,IAAI,EAAE,QAAQ,CAAC;IACxB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;CAC1C;AAED,MAAM,WAAW,gBAAgB;IAC/B,qDAAqD;IACrD,QAAQ,CAAC,YAAY,CAAC,EAAE,UAAU,CAAC,OAAO,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;CACvD;AAED,wBAAsB,OAAO,CAC3B,OAAO,EAAE,WAAW,EACpB,IAAI,GAAE,gBAAqB,GAC1B,OAAO,CAAC,aAAa,CAAC,CAgHxB"}

package/dist/commands/init.js

@@ -1,6 +1,7 @@
-import { readFileSync, writeFileSync, mkdirSync, existsSync } from "node:fs";
+import { readFileSync, mkdirSync, existsSync } from "node:fs";
 import { dirname, join, resolve } from "node:path";
 import { fileURLToPath } from "node:url";
+import { atomicWriteOverwrite } from "../util/atomic-write.js";
 import { readEnv } from "../lib/env.js";
 import { profilePath, detectClients, } from "../lib/paths.js";
 import { adapterFor } from "../clients/index.js";
@@ -165,7 +166,9 @@ function applyClientDiff(cd, desired, overwrite) {
     const merged = mergeMcpServers(existing ?? {}, desired, overwrite);
     const shaped = adapter.shapeConfig(existing, merged.merged.mcpServers);
     mkdirSync(dirname(cd.path), { recursive: true });
-    writeFileSync(cd.path, `${JSON.stringify(shaped, null, 2)}\n`, "utf8");
+    // Atomic overwrite: write to a .tmp sibling then rename into place to
+    // prevent a TOCTOU window between existsSync (above) and the write.
+    atomicWriteOverwrite(cd.path, `${JSON.stringify(shaped, null, 2)}\n`);
 }
 function resolveTemplatePath(profile) {
     const filename = profile === "minimal" ? "profile.minimal.yaml" : "profile.example.yaml";

package/dist/commands/init.js.map

@@ -1 +1 @@
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+{"version":3,"file":"init.js","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AAC9D,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACnD,OAAO,EAAE,aAAa,EAAE,MAAM,UAAU,CAAC;AACzC,OAAO,EAAE,oBAAoB,EAAE,MAAM,yBAAyB,CAAC;AAQ/D,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AACxC,OAAO,EACL,WAAW,EACX,aAAa,GAEd,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACjD,OAAO,EAAE,eAAe,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AACxE,OAAO,EAAE,wBAAwB,EAAE,MAAM,sBAAsB,CAAC;AAChE,OAAO,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AAaxE,MAAM,CAAC,KAAK,UAAU,OAAO,CAC3B,OAAoB,EACpB,OAAyB,EAAE;IAE3B,MAAM,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC;IAC7C,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,qBAAqB;IACrB,MAAM,UAAU,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC;IACtC,MAAM,OAAO,GAAG,WAAW,CAAC,UAAU,EAAE,OAAO,CAAC,MAAM,CAAC,CAAC;IACxD,MAAM,eAAe,GAAG,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;IAExD,IAAI,OAAO,CAAC,MAAM,KAAK,KAAK,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACrD,QAAQ,CAAC,IAAI,CACX,4CAA4C,OAAO,CAAC,MAAM,IAAI,CAC/D,CAAC;IACJ,CAAC;IAED,IAAI,OAAO,CAAC,MAAM,KAAK,KAAK,IAAI,eAAe,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC7D,QAAQ,CAAC,IAAI,CAAC,mCAAmC,CAAC,CAAC;QACnD,QAAQ,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QAC7B,KAAK,MAAM,CAAC,IAAI,OAAO,EAAE,CAAC;YACxB,QAAQ,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC,KAAK,MAAM,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;QACvD,CAAC;QACD,QAAQ,CAAC,IAAI,CAAC,2DAA2D,CAAC,CAAC;QAC3E,OAAO;YACL,IAAI,EAAE;gBACJ,aAAa,EAAE,SAAS;gBACxB,WAAW,EAAE,WAAW,CAAC,GAAG,CAAC;gBAC7B,OAAO,EAAE,EAAE;aACZ;YACD,OAAO,EAAE,KAAK;YACd,QAAQ;SACT,CAAC;IACJ,CAAC;IAED,gDAAgD;IAChD,MAAM,QAAQ,GAAG,cAAc,CAAC,GAAG,CAAC,CAAC;IACrC,MAAM,cAAc,GAAG,eAAe,CAAC;QACrC,GAAG,CAAC,QAAQ,KAAK,SAAS,CAAC,CAAC,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;KAChD,CAAC,CAAC;IAEH,cAAc;IACd,MAAM,KAAK,GAAG,WAAW,CAAC,GAAG,CAAC,CAAC;IAC/B,MAAM,aAAa,GAA8B,UAAU,CAAC,KAAK,CAAC;QAChE,CAAC,CAAC,QAAQ;QACV,CAAC,CAAC,QAAQ,CAAC;IAEb,sBAAsB;IACtB,MAAM,WAAW,GAAiB,EAAE,CAAC;IACrC,uEAAuE;IACvE,oEAAoE;IACpE,MAAM,KAAK,GACT,OAAO,CAAC,MAAM,KAAK,KAAK,CAAC,CAAC,CAAC,eAAe,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAEnE,KAAK,MAAM,MAAM,IAAI,KAAK,EAAE,CAAC;QAC3B,MAAM,IAAI,GAAG,MAAM,UAAU,CAAC,MAAM,EAAE,cAAc,EAAE,OAAO,CAAC,CAAC;QAC/D,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACzB,CAAC;IAED,MAAM,IAAI,GAAa;QACrB,aAAa;QACb,WAAW,EAAE,KAAK;QAClB,OAAO,EAAE,WAAW;KACrB,CAAC;IAEF,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC;QACnB,OAAO;YACL,IAAI;YACJ,OAAO,EAAE,KAAK;YACd,QAAQ,EAAE;gBACR,8BAA8B;gBAC9B,GAAG,QAAQ;gBACX,GAAG,UAAU,CAAC,IAAI,CAAC;aACpB;SACF,CAAC;IACJ,CAAC;IAED,YAAY;IACZ,eAAe;IACf,IAAI,aAAa,KAAK,QAAQ,EAAE,CAAC;QAC/B,MAAM,YAAY,GAAG,mBAAmB,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC1D,wBAAwB,CAAC;YACvB,YAAY;YACZ,UAAU,EAAE,KAAK;YACjB,WAAW,EAAE,GAAG,CAAC,IAAI;SACtB,CAAC,CAAC;QACH,QAAQ,CAAC,IAAI,CAAC,sBAAsB,KAAK,GAAG,CAAC,CAAC;IAChD,CAAC;SAAM,CAAC;QACN,QAAQ,CAAC,IAAI,CAAC,6BAA6B,KAAK,mBAAmB,CAAC,CAAC;IACvE,CAAC;IAED,sBAAsB;IACtB,KAAK,MAAM,EAAE,IAAI,WAAW,EAAE,CAAC;QAC7B,IAAI,EAAE,CAAC,MAAM,KAAK,QAAQ,IAAI,EAAE,CAAC,MAAM,KAAK,QAAQ,EAAE,CAAC;YACrD,eAAe,CAAC,EAAE,EAAE,cAAc,EAAE,OAAO,CAAC,GAAG,CAAC,CAAC;YACjD,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,CAAC,MAAM,OAAO,EAAE,CAAC,IAAI,GAAG,CAAC,CAAC;QACrD,CAAC;aAAM,IAAI,EAAE,CAAC,MAAM,KAAK,WAAW,EAAE,CAAC;YACrC,QAAQ,CAAC,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,qBAAqB,EAAE,CAAC,IAAI,GAAG,CAAC,CAAC;QAC7D,CAAC;aAAM,IAAI,EAAE,CAAC,MAAM,KAAK,MAAM,EAAE,CAAC;YAChC,QAAQ,CAAC,IAAI,CACX,WAAW,EAAE,CAAC,MAAM,OAAO,EAAE,CAAC,IAAI,KAChC,EAAE,CAAC,MAAM,IAAI,4CACf,GAAG,CACJ,CAAC;QACJ,CAAC;IACH,CAAC;IAED,iBAAiB;IACjB,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAClB,QAAQ,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IAC5B,QAAQ,CAAC,IAAI,CAAC,8DAA8D,CAAC,CAAC;IAC9E,QAAQ,CAAC,IAAI,CAAC,aAAa,KAAK,0CAA0C,CAAC,CAAC;IAE5E,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,CAAC;AAC3C,CAAC;AAED,SAAS,WAAW,CAClB,UAA0C,EAC1C,MAAwB;IAExB,IAAI,MAAM,KAAK,KAAK;QAAE,OAAO,UAAU,CAAC;IACxC,OAAO,UAAU,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,KAAK,MAAM,CAAC,CAAC;AACnD,CAAC;AAED,KAAK,UAAU,UAAU,CACvB,MAAuB,EACvB,OAAuC,EACvC,OAAoB;IAEpB,IAAI,QAAQ,GAAmC,IAAI,CAAC;IACpD,IAAI,UAAU,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC;QAC5B,MAAM,GAAG,GAAG,YAAY,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;QAC9C,MAAM,MAAM,GAAG,eAAe,CAAC,GAAG,CAAC,CAAC;QACpC,IAAI,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC;YACf,OAAO;gBACL,MAAM,EAAE,MAAM,CAAC,EAAE;gBACjB,IAAI,EAAE,MAAM,CAAC,IAAI;gBACjB,MAAM,EAAE,MAAM;gBACd,KAAK,EAAE,EAAE;gBACT,UAAU,EAAE,EAAE;gBACd,MAAM,EAAE,sCAAsC,MAAM,CAAC,KAAK,EAAE;aAC7D,CAAC;QACJ,CAAC;QACD,QAAQ,GAAI,MAAM,CAAC,KAAiC,IAAI,EAAE,CAAC;IAC7D,CAAC;IAED,MAAM,KAAK,GAAG,eAAe,CAC3B,CAAC,QAAQ,IAAI,EAAE,CAAoD,EACnE,OAAO,EACP,OAAO,CAAC,GAAG,CACZ,CAAC;IAEF,IAAI,KAAK,CAAC,UAAU,CAAC,MAAM,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC;QAChD,OAAO;YACL,MAAM,EAAE,MAAM,CAAC,EAAE;YACjB,IAAI,EAAE,MAAM,CAAC,IAAI;YACjB,MAAM,EAAE,MAAM;YACd,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,UAAU,EAAE,KAAK,CAAC,UAAU;YAC5B,MAAM,EACJ,kEAAkE;SACrE,CAAC;IACJ,CAAC;IAED,IAAI,KAAK,CAAC,SAAS,IAAI,QAAQ,KAAK,IAAI,EAAE,CAAC;QACzC,OAAO;YACL,MAAM,EAAE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package/dist/commands/install-hooks.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"install-hooks.d.ts","sourceRoot":"","sources":["../../src/commands/install-hooks.ts"],"names":[],"mappings":"AAwCA,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC;IAC3B,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC;IAC5B;;;;;;;OAOG;IACH,QAAQ,CAAC,aAAa,CAAC,EAAE,OAAO,CAAC;CAClC;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,CAAC,QAAQ,EAAE,MAAM,EAAE,CAAC;IAC5B,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;CAC3B;AAoBD,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,GAC3B,OAAO,CAAC,kBAAkB,CAAC,CAwH7B"}
+{"version":3,"file":"install-hooks.d.ts","sourceRoot":"","sources":["../../src/commands/install-hooks.ts"],"names":[],"mappings":"AAmCA,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC;IAC3B,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC;IAC5B;;;;;;;OAOG;IACH,QAAQ,CAAC,aAAa,CAAC,EAAE,OAAO,CAAC;CAClC;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,CAAC,QAAQ,EAAE,MAAM,EAAE,CAAC;IAC5B,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;CAC3B;AAoBD,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,GAC3B,OAAO,CAAC,kBAAkB,CAAC,CA+I7B"}

package/dist/commands/install-hooks.js

@@ -26,10 +26,11 @@
  *   Environment variable `NEURODOCK_GUARDRAILS=off` disables the hook
  *   without touching settings.json.
  */
-import { mkdirSync, readFileSync, writeFileSync, existsSync, copyFileSync, } from "node:fs";
+import { mkdirSync, readFileSync, existsSync, copyFileSync } from "node:fs";
 import { dirname, join, resolve } from "node:path";
 import { fileURLToPath } from "node:url";
 import { homedir } from "node:os";
+import { atomicWriteOverwrite } from "../util/atomic-write.js";
 import { spawnSync } from "node:child_process";
 const HOOK_EVENTS = [
     "SessionStart",
@@ -97,7 +98,9 @@ export async function runInstallHooks(options) {
         }
         else {
             mkdirSync(dirname(settingsPath), { recursive: true });
-            writeFileSync(settingsPath, merged.json + "\n", "utf8");
+            // Atomic overwrite prevents a TOCTOU race between the existsSync
+            // guard (above) and the write to settings.json.
+            atomicWriteOverwrite(settingsPath, merged.json + "\n");
             messages.push("[install-hooks] updated ~/.claude/settings.json");
             for (const line of merged.diff)
                 messages.push(`  ${line}`);
@@ -136,6 +139,24 @@ export async function runInstallHooks(options) {
             }
             else {
                 messages.push(`[install-hooks] daemon autostart: ${result.stdout.trim()}`);
+                // Also START the daemon immediately so the user does not have to
+                // wait for the next login. Detached + unref so it survives this
+                // process exit. The 2026-05-26 silent-failure incident was caused
+                // exactly by registering autostart but never actually launching
+                // the daemon, so the next 6h session ran with no guardrail tick.
+                try {
+                    const { spawn } = await import("node:child_process");
+                    const child = spawn("python", [daemonTarget, "run"], {
+                        detached: true,
+                        stdio: "ignore",
+                    });
+                    child.unref();
+                    messages.push("[install-hooks] daemon started in background (run 'neurodock guardrail status' to confirm).");
+                }
+                catch (cause) {
+                    const msg = cause instanceof Error ? cause.message : "spawn failed";
+                    messages.push(`[install-hooks] daemon autostart registered but background-launch failed (${msg}). It will run on next login.`);
+                }
             }
         }
     }
@@ -212,7 +233,9 @@ function uninstallHooks(settingsPath, dryRun) {
         messages.push("[install-hooks] would remove NeuroDock entries from ~/.claude/settings.json");
     }
     else {
-        writeFileSync(settingsPath, formatted + "\n", "utf8");
+        // Atomic overwrite: the existsSync+read above and the write here have a
+        // TOCTOU window; renaming a tmp file into place closes it.
+        atomicWriteOverwrite(settingsPath, formatted + "\n");
         messages.push("[install-hooks] removed NeuroDock entries from ~/.claude/settings.json");
     }
     messages.push("Hook script left at ~/.neurodock/hooks/ — delete manually if you want it gone.");

package/dist/commands/install-hooks.js.map

@@ -1 +1 @@
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package/dist/commands/plugin.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"plugin.d.ts","sourceRoot":"","sources":["../../src/commands/plugin.ts"],"names":[],"mappings":"AAaA,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAExC,OAAO,EAEL,KAAK,yBAAyB,EAC/B,MAAM,yBAAyB,CAAC;AAEjC;;;;;;;;;;GAUG;AACH,eAAO,MAAM,cAAc,aAAa,CAAC;AAMzC;;;;GAIG;AACH,MAAM,WAAW,cAAc;IAC7B,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,WAAW,CAAC,EAAE,MAAM,CAAC;CAC/B;AAED,MAAM,MAAM,QAAQ,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;AAErC,MAAM,WAAW,kBAAkB;IACjC,QAAQ,CAAC,YAAY,CAAC,EAAE,UAAU,CAAC,OAAO,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;IACtD;;;OAGG;IACH,QAAQ,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,EAAE,MAAM,KAAK,OAAO,CAAC,OAAO,CAAC,CAAC;CAC1D;AAcD,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,GAAG,EAAE,OAAO,CAAC;IACtB,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,QAAQ,CAAC,KAAK,EAAE,OAAO,CAAC;CACzB;AAED,MAAM,WAAW,eAAe;IAC9B,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,cAAc,EAAE,MAAM,CAAC;IAChC,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,QAAQ,EAAE,cAAc,GAAG,IAAI,CAAC;IACzC,QAAQ,CAAC,MAAM,EAAE,WAAW,GAAG,aAAa,GAAG,SAAS,GAAG,SAAS,GAAG,MAAM,CAAC;IAC9E,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,UAAU,EAAE,aAAa,CAAC,yBAAyB,CAAC,CAAC;IAC9D,QAAQ,CAAC,QAAQ,EAAE,QAAQ,CAAC;CAC7B;AAED,wBAAsB,YAAY,CAChC,OAAO,EAAE,gBAAgB,EACzB,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,eAAe,CAAC,CAgL1B;AA4BD,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,GAAG,EAAE,OAAO,CAAC;IACtB,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;CAC1B;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,MAAM,EAAE,SAAS,GAAG,SAAS,GAAG,SAAS,GAAG,SAAS,CAAC;IAC/D,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,CAAC,CAAC;CAC1B;AAED,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,EAC5B,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,kBAAkB,CAAC,CAuD7B;AAMD,MAAM,WAAW,eAAe;IAC9B,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,QAAQ,EAAE,cAAc,GAAG,IAAI,CAAC;IACzC,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;CAC3B;AAED,MAAM,WAAW,iBAAiB;IAChC,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;CACxB;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,OAAO,EAAE,aAAa,CAAC,eAAe,CAAC,CAAC;IACjD,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;CAC1C;AAED,wBAAsB,aAAa,CACjC,OAAO,EAAE,iBAAiB,EAC1B,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,gBAAgB,CAAC,CA6E3B;AAMD,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;CACvB;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;IAC5B,QAAQ,CAAC,MAAM,EAAE,SAAS,GAAG,iBAAiB,GAAG,SAAS,CAAC;IAC3D,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,CAAC,CAAC;CAC1B;AAED,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,EAC5B,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,kBAAkB,CAAC,CAoD7B;AAED,MAAM,WAAW,oBAAoB;IACnC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;CACvB;AAED,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;IAC5B,QAAQ,CAAC,MAAM,EAAE,UAAU,GAAG,kBAAkB,GAAG,SAAS,CAAC;IAC7D,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,CAAC,CAAC;CAC1B;AAED,wBAAsB,gBAAgB,CACpC,OAAO,EAAE,oBAAoB,EAC7B,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,mBAAmB,CAAC,CAyC9B;AAMD,MAAM,WAAW,qBAAqB;IACpC,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;CACxB;AAED,MAAM,WAAW,oBAAoB;IACnC,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,cAAc,EAAE,MAAM,CAAC;IAChC,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAC9B,QAAQ,CAAC,KAAK,EAAE,OAAO,CAAC;IACxB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,UAAU,CAAC,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,UAAU,EAAE,aAAa,CAAC,yBAAyB,CAAC,CAAC;IAC9D,QAAQ,CAAC,QAAQ,EAAE,cAAc,GAAG,IAAI,CAAC;IACzC,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,QAAQ,EAAE,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;CAC9B;AAED,wBAAsB,iBAAiB,CACrC,OAAO,EAAE,qBAAqB,EAC9B,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,oBAAoB,CAAC,CA4K/B"}

package/dist/commands/plugin.js

@@ -1,5 +1,6 @@
-import { cpSync, existsSync, mkdirSync, readFileSync, readdirSync, rmSync, statSync, writeFileSync, } from "node:fs";
+import { cpSync, existsSync, mkdirSync, readFileSync, readdirSync, rmSync, statSync, } from "node:fs";
 import { isAbsolute, join, resolve } from "node:path";
+import { atomicWriteNew } from "../util/atomic-write.js";
 import { parse as parseYaml } from "yaml";
 import prompts from "prompts";
 import { readEnv } from "../lib/env.js";
@@ -284,7 +285,10 @@ export async function runPluginEnable(options, deps = {}) {
             exitCode: 0,
         };
     }
-    writeFileSync(markerPath, `# Created by 'neurodock plugin enable'. Delete (or run\n# 'neurodock plugin disable ${options.name}') to deactivate.\n`, "utf8");
+    // Atomic exclusive create: the existsSync guard above and this write have
+    // a TOCTOU window. O_CREAT | O_EXCL makes the check-and-create one
+    // kernel operation — a concurrent enabler gets EEXIST rather than a race.
+    atomicWriteNew(markerPath, `# Created by 'neurodock plugin enable'. Delete (or run\n# 'neurodock plugin disable ${options.name}') to deactivate.\n`);
     messages.push(`Enabled plugin '${options.name}'.`);
     messages.push("Restart your MCP client to pick up the change.");
     return {