@neurcode-ai/cli 0.20.0 → 0.20.1

package/dist/utils/agent-session-launcher.js.map

@@ -1 +1 @@
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package/dist/utils/brain-lifecycle.d.ts

@@ -1,17 +1,31 @@
-import type { RepositoryGraphFreshness, RepositoryIndexResult } from '@neurcode-ai/contracts';
-export declare const BRAIN_LIFECYCLE_SCHEMA_VERSION: "neurcode.brain-lifecycle.v1";
+import type { RepositoryGraphFreshness, RepositoryGraphLimits, RepositoryIndexProgress, RepositoryIndexResult } from '@neurcode-ai/contracts';
+export declare const BRAIN_LIFECYCLE_SCHEMA_VERSION: "neurcode.brain-lifecycle.v2";
 export type BrainLifecycleState = 'missing' | 'scheduled' | 'building' | 'partial' | 'fresh' | 'stale' | 'failed' | 'unsupported';
+export type BrainIndexSource = 'manual' | 'auto';
 export interface BrainLifecycleStatus {
     schemaVersion: typeof BRAIN_LIFECYCLE_SCHEMA_VERSION;
     state: BrainLifecycleState;
+    jobId: string | null;
+    source: BrainIndexSource | null;
     updatedAt: string;
     startedAt: string | null;
     completedAt: string | null;
     pid: number | null;
+    processStartFingerprint: string | null;
+    processGroupId: number | null;
+    detachedProcessGroup: boolean;
+    elapsedMs: number | null;
+    peakRssMb: number | null;
+    peakRssMeasurement: 'sampled_process_rss' | 'unavailable';
+    requestedLimits: Partial<RepositoryGraphLimits> | null;
     progress: {
+        phase: RepositoryIndexProgress['phase'] | null;
         filesScanned: number;
         filesIndexed: number;
         totalFiles: number | null;
+        bytesScanned: number;
+        nodes: number;
+        edges: number;
         percent: number | null;
     };
     freshness: RepositoryGraphFreshness | null;
@@ -30,14 +44,19 @@ export declare function brainLifecyclePath(repoRoot: string): string;
 export declare function readBrainLifecycle(repoRoot: string): BrainLifecycleStatus | null;
 export declare function writeBrainLifecycle(repoRoot: string, status: BrainLifecycleStatus): BrainLifecycleStatus;
 export declare function inspectBrainLifecycle(repoRoot: string): Promise<BrainLifecycleStatus>;
-export declare function markBrainBuilding(repoRoot: string): BrainLifecycleStatus;
-export declare function markBrainIndexResult(repoRoot: string, result: RepositoryIndexResult): BrainLifecycleStatus;
-export declare function markBrainFailed(repoRoot: string, reasonCode: string): BrainLifecycleStatus;
+export declare function beginBrainIndex(repoRoot: string, input: {
+    source: BrainIndexSource;
+    requestedLimits: Partial<RepositoryGraphLimits>;
+    jobId?: string;
+}): Promise<BrainLifecycleStatus>;
+export declare function recordBrainProgress(repoRoot: string, jobId: string, progress: RepositoryIndexProgress): BrainLifecycleStatus | null;
+export declare function markBrainIndexResult(repoRoot: string, result: RepositoryIndexResult, jobId?: string): BrainLifecycleStatus;
+export declare function markBrainFailed(repoRoot: string, reasonCode: string, jobId?: string): BrainLifecycleStatus;
 export declare function scheduleBrainIndex(repoRoot: string, options?: {
     force?: boolean;
     maxFiles?: number;
     maxTotalBytes?: number;
     maxBytesPerFile?: number;
 }): Promise<BrainLifecycleStatus>;
-export declare function cancelBrainIndex(repoRoot: string): BrainLifecycleStatus;
+export declare function cancelBrainIndex(repoRoot: string): Promise<BrainLifecycleStatus>;
 //# sourceMappingURL=brain-lifecycle.d.ts.map

package/dist/utils/brain-lifecycle.d.ts.map

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package/dist/utils/brain-lifecycle.js

@@ -5,17 +5,19 @@ exports.brainLifecyclePath = brainLifecyclePath;
 exports.readBrainLifecycle = readBrainLifecycle;
 exports.writeBrainLifecycle = writeBrainLifecycle;
 exports.inspectBrainLifecycle = inspectBrainLifecycle;
-exports.markBrainBuilding = markBrainBuilding;
+exports.beginBrainIndex = beginBrainIndex;
+exports.recordBrainProgress = recordBrainProgress;
 exports.markBrainIndexResult = markBrainIndexResult;
 exports.markBrainFailed = markBrainFailed;
 exports.scheduleBrainIndex = scheduleBrainIndex;
 exports.cancelBrainIndex = cancelBrainIndex;
+const node_crypto_1 = require("node:crypto");
 const node_child_process_1 = require("node:child_process");
 const node_fs_1 = require("node:fs");
 const node_path_1 = require("node:path");
 const brain_1 = require("@neurcode-ai/brain");
 const cli_entry_1 = require("./cli-entry");
-exports.BRAIN_LIFECYCLE_SCHEMA_VERSION = 'neurcode.brain-lifecycle.v1';
+exports.BRAIN_LIFECYCLE_SCHEMA_VERSION = 'neurcode.brain-lifecycle.v2';
 function brainLifecyclePath(repoRoot) {
     return (0, node_path_1.join)(repoRoot, '.neurcode', 'brain', 'lifecycle.json');
 }
@@ -31,14 +33,27 @@ function defaultStatus(state = 'missing') {
     return {
         schemaVersion: exports.BRAIN_LIFECYCLE_SCHEMA_VERSION,
         state,
+        jobId: null,
+        source: null,
         updatedAt: new Date().toISOString(),
         startedAt: null,
         completedAt: null,
         pid: null,
+        processStartFingerprint: null,
+        processGroupId: null,
+        detachedProcessGroup: false,
+        elapsedMs: null,
+        peakRssMb: null,
+        peakRssMeasurement: 'unavailable',
+        requestedLimits: null,
         progress: {
+            phase: null,
             filesScanned: 0,
             filesIndexed: 0,
             totalFiles: null,
+            bytesScanned: 0,
+            nodes: 0,
+            edges: 0,
             percent: null,
         },
         freshness: null,
@@ -49,13 +64,53 @@ function defaultStatus(state = 'missing') {
         recoveryCommands: recoveryCommands(),
     };
 }
+function normalizeStatus(value) {
+    const fallback = defaultStatus(value.state ?? 'missing');
+    const progress = value.progress ?? {};
+    return {
+        ...fallback,
+        ...value,
+        schemaVersion: exports.BRAIN_LIFECYCLE_SCHEMA_VERSION,
+        jobId: typeof value.jobId === 'string' ? value.jobId : null,
+        source: value.source === 'manual' || value.source === 'auto' ? value.source : null,
+        processStartFingerprint: typeof value.processStartFingerprint === 'string' ? value.processStartFingerprint : null,
+        processGroupId: Number.isSafeInteger(value.processGroupId) ? Number(value.processGroupId) : null,
+        detachedProcessGroup: value.detachedProcessGroup === true,
+        elapsedMs: Number.isFinite(value.elapsedMs) ? Number(value.elapsedMs) : null,
+        peakRssMb: Number.isFinite(value.peakRssMb) ? Number(value.peakRssMb) : null,
+        peakRssMeasurement: value.peakRssMeasurement === 'sampled_process_rss'
+            ? 'sampled_process_rss'
+            : 'unavailable',
+        requestedLimits: value.requestedLimits && typeof value.requestedLimits === 'object'
+            ? value.requestedLimits
+            : null,
+        progress: {
+            ...fallback.progress,
+            ...progress,
+            phase: typeof progress.phase === 'string'
+                ? progress.phase
+                : null,
+            filesScanned: Number(progress.filesScanned ?? 0),
+            filesIndexed: Number(progress.filesIndexed ?? 0),
+            totalFiles: Number.isFinite(progress.totalFiles) ? Number(progress.totalFiles) : null,
+            bytesScanned: Number(progress.bytesScanned ?? 0),
+            nodes: Number(progress.nodes ?? 0),
+            edges: Number(progress.edges ?? 0),
+            percent: Number.isFinite(progress.percent) ? Number(progress.percent) : null,
+        },
+        reasonCodes: Array.isArray(value.reasonCodes) ? value.reasonCodes.filter((item) => typeof item === 'string') : [],
+        unsupportedFacts: Array.isArray(value.unsupportedFacts)
+            ? value.unsupportedFacts.filter((item) => typeof item === 'string')
+            : [],
+        recoveryCommands: recoveryCommands(),
+    };
+}
 function readBrainLifecycle(repoRoot) {
     const path = brainLifecyclePath(repoRoot);
     if (!(0, node_fs_1.existsSync)(path))
         return null;
     try {
-        const parsed = JSON.parse((0, node_fs_1.readFileSync)(path, 'utf8'));
-        return parsed.schemaVersion === exports.BRAIN_LIFECYCLE_SCHEMA_VERSION ? parsed : null;
+        return normalizeStatus(JSON.parse((0, node_fs_1.readFileSync)(path, 'utf8')));
     }
     catch {
         return null;
@@ -64,10 +119,42 @@ function readBrainLifecycle(repoRoot) {
 function writeBrainLifecycle(repoRoot, status) {
     const path = brainLifecyclePath(repoRoot);
     (0, node_fs_1.mkdirSync)((0, node_path_1.dirname)(path), { recursive: true });
-    const temporary = `${path}.tmp.${process.pid}`;
-    (0, node_fs_1.writeFileSync)(temporary, `${JSON.stringify(status, null, 2)}\n`, { encoding: 'utf8', mode: 0o600 });
-    (0, node_fs_1.renameSync)(temporary, path);
-    return status;
+    const temporary = `${path}.tmp.${process.pid}.${(0, node_crypto_1.randomUUID)()}`;
+    let descriptor = null;
+    try {
+        descriptor = (0, node_fs_1.openSync)(temporary, 'w', 0o600);
+        (0, node_fs_1.writeFileSync)(descriptor, `${JSON.stringify(status, null, 2)}\n`, 'utf8');
+        (0, node_fs_1.fsyncSync)(descriptor);
+        (0, node_fs_1.closeSync)(descriptor);
+        descriptor = null;
+        (0, node_fs_1.renameSync)(temporary, path);
+        try {
+            const directory = (0, node_fs_1.openSync)((0, node_path_1.dirname)(path), 'r');
+            try {
+                (0, node_fs_1.fsyncSync)(directory);
+            }
+            finally {
+                (0, node_fs_1.closeSync)(directory);
+            }
+        }
+        catch {
+            // Directory fsync is not supported everywhere.
+        }
+        return status;
+    }
+    catch (error) {
+        if (descriptor !== null) {
+            try {
+                (0, node_fs_1.closeSync)(descriptor);
+            }
+            catch { /* best effort */ }
+        }
+        try {
+            (0, node_fs_1.rmSync)(temporary, { force: true });
+        }
+        catch { /* best effort */ }
+        throw error;
+    }
 }
 function lifecycleState(freshness) {
     if (freshness.state === 'fresh')
@@ -82,82 +169,204 @@ function lifecycleState(freshness) {
         return 'building';
     return 'failed';
 }
-function pidAlive(pid) {
-    if (!pid || pid <= 0)
-        return false;
-    try {
-        process.kill(pid, 0);
-        return true;
-    }
-    catch {
-        return false;
-    }
+function runningIdentity(status) {
+    return (0, brain_1.inspectOwnedProcess)(status.pid, status.processStartFingerprint);
 }
 async function inspectBrainLifecycle(repoRoot) {
     const persisted = readBrainLifecycle(repoRoot);
     const freshness = await (0, brain_1.repositoryGraphStatus)(repoRoot);
-    const graph = (0, brain_1.readRepositoryGraph)(repoRoot);
-    const indexedState = graph?.coverage.filesIndexed === 0 && graph.coverage.filesUnsupported > 0
+    const metadata = (0, brain_1.readRepositoryGraphMetadata)(repoRoot);
+    const indexedState = metadata?.coverage.filesIndexed === 0 && metadata.coverage.filesUnsupported > 0
         ? 'unsupported'
         : lifecycleState(freshness);
-    const state = persisted?.state === 'scheduled' && pidAlive(persisted.pid)
-        ? 'scheduled'
-        : persisted?.state === 'building' && pidAlive(persisted.pid)
-            ? 'building'
+    const persistedRunning = persisted?.state === 'scheduled' || persisted?.state === 'building';
+    const identity = persistedRunning && persisted ? runningIdentity(persisted) : 'unknown';
+    const state = persistedRunning && identity === 'alive_same'
+        ? persisted.state
+        : persistedRunning && (identity === 'dead' || identity === 'reused')
+            ? 'failed'
             : indexedState;
-    return {
+    const now = Date.now();
+    const started = Date.parse(persisted?.startedAt ?? '');
+    const elapsedMs = Number.isFinite(started)
+        ? Math.max(0, (state === 'scheduled' || state === 'building' ? now : Date.parse(persisted?.completedAt ?? '') || now) - started)
+        : persisted?.elapsedMs ?? null;
+    const result = {
         ...(persisted ?? defaultStatus(state)),
         state,
         updatedAt: new Date().toISOString(),
+        completedAt: state === 'failed' && persistedRunning ? new Date().toISOString() : persisted?.completedAt ?? null,
         pid: state === 'scheduled' || state === 'building' ? persisted?.pid ?? null : null,
+        processStartFingerprint: state === 'scheduled' || state === 'building' ? persisted?.processStartFingerprint ?? null : null,
+        processGroupId: state === 'scheduled' || state === 'building' ? persisted?.processGroupId ?? null : null,
+        elapsedMs,
         freshness,
-        graphId: graph?.graphId ?? null,
-        generation: graph?.generation ?? null,
+        graphId: metadata?.graphId ?? null,
+        generation: metadata?.generation ?? null,
         progress: {
-            filesScanned: graph?.coverage.filesSeen ?? persisted?.progress.filesScanned ?? 0,
-            filesIndexed: graph?.coverage.filesIndexed ?? persisted?.progress.filesIndexed ?? 0,
-            totalFiles: graph?.coverage.filesSeen ?? persisted?.progress.totalFiles ?? null,
-            percent: graph?.coverage.filesSeen
-                ? Math.round((graph.coverage.filesIndexed / graph.coverage.filesSeen) * 100)
+            phase: state === 'scheduled' || state === 'building' ? persisted?.progress.phase ?? null : 'completed',
+            filesScanned: metadata?.coverage.filesSeen ?? persisted?.progress.filesScanned ?? 0,
+            filesIndexed: metadata?.coverage.filesIndexed ?? persisted?.progress.filesIndexed ?? 0,
+            totalFiles: metadata?.coverage.filesSeen ?? persisted?.progress.totalFiles ?? null,
+            bytesScanned: persisted?.progress.bytesScanned ?? 0,
+            nodes: metadata?.nodeCount ?? persisted?.progress.nodes ?? 0,
+            edges: metadata?.edgeCount ?? persisted?.progress.edges ?? 0,
+            percent: metadata?.coverage.filesSeen
+                ? Math.round((metadata.coverage.filesIndexed / metadata.coverage.filesSeen) * 100)
                 : persisted?.progress.percent ?? null,
         },
-        reasonCodes: freshness.reasonCodes,
+        reasonCodes: state === 'failed' && persistedRunning
+            ? [identity === 'reused' ? 'worker_pid_reused' : 'worker_exited_without_completion']
+            : freshness.reasonCodes,
         unsupportedFacts: [
             ...(freshness.unsupportedFileCount > 0 ? ['unsupported_languages'] : []),
-            ...(graph?.coverage.filesFailed ? ['failed_file_analysis'] : []),
-            ...(graph?.coverage.filesSkipped ? ['skipped_file_analysis'] : []),
+            ...(metadata?.coverage.filesFailed ? ['failed_file_analysis'] : []),
+            ...(metadata?.coverage.filesSkipped ? ['skipped_file_analysis'] : []),
         ],
         recoveryCommands: recoveryCommands(),
     };
+    if (state === 'failed' && persistedRunning)
+        writeBrainLifecycle(repoRoot, result);
+    return result;
+}
+function activeJobMatches(repoRoot, jobId) {
+    const current = readBrainLifecycle(repoRoot);
+    if (!current)
+        return null;
+    if (jobId && current.jobId !== jobId)
+        return null;
+    return current;
+}
+async function terminateIndexWorker(status) {
+    if (!status.pid)
+        return 'not_running';
+    const identity = runningIdentity(status);
+    if (identity === 'dead')
+        return 'not_running';
+    if (identity === 'reused' || identity === 'unknown')
+        return 'identity_mismatch';
+    const target = status.pid;
+    const canSignalGroup = status.detachedProcessGroup
+        && status.processGroupId === target
+        && (0, brain_1.processGroupId)(target) === target;
+    const signal = (signalName) => {
+        try {
+            process.kill(canSignalGroup ? -target : target, signalName);
+        }
+        catch {
+            // The worker may have exited between identity validation and signal delivery.
+        }
+    };
+    signal('SIGTERM');
+    const deadline = Date.now() + 3_000;
+    while (Date.now() < deadline && (0, brain_1.inspectOwnedProcess)(target, status.processStartFingerprint) === 'alive_same') {
+        await new Promise((resolve) => setTimeout(resolve, 100));
+    }
+    if ((0, brain_1.inspectOwnedProcess)(target, status.processStartFingerprint) === 'alive_same')
+        signal('SIGKILL');
+    return 'terminated';
+}
+function releaseAbandonedGraphLocks(repoRoot) {
+    (0, brain_1.reclaimAbandonedOwnedFile)((0, brain_1.repositoryGraphLockPath)(repoRoot));
+    (0, brain_1.reclaimAbandonedOwnedFile)(`${(0, brain_1.legacyRepositoryGraphPath)(repoRoot)}.lock`);
 }
-function markBrainBuilding(repoRoot) {
-    const previous = readBrainLifecycle(repoRoot) ?? defaultStatus('building');
+async function beginBrainIndex(repoRoot, input) {
+    const current = readBrainLifecycle(repoRoot);
+    if (current && (current.state === 'scheduled' || current.state === 'building')) {
+        const identity = runningIdentity(current);
+        const sameScheduledJob = input.source === 'auto'
+            && Boolean(input.jobId)
+            && current.jobId === input.jobId
+            && current.pid === process.pid;
+        if (!sameScheduledJob && identity === 'alive_same') {
+            if (input.source === 'manual' && current.source === 'auto') {
+                await terminateIndexWorker(current);
+                releaseAbandonedGraphLocks(repoRoot);
+            }
+            else {
+                throw new Error('brain_index_already_running');
+            }
+        }
+    }
+    const jobId = input.jobId || process.env.NEURCODE_BRAIN_JOB_ID || (0, node_crypto_1.randomUUID)();
+    const identity = (0, brain_1.createOwnedProcessIdentity)({ jobId });
+    const now = new Date().toISOString();
+    const scheduled = current?.jobId === jobId ? current : null;
     return writeBrainLifecycle(repoRoot, {
-        ...previous,
+        ...defaultStatus('building'),
         state: 'building',
-        updatedAt: new Date().toISOString(),
-        startedAt: previous.startedAt ?? new Date().toISOString(),
-        completedAt: null,
+        jobId,
+        source: input.source,
+        updatedAt: now,
+        startedAt: scheduled?.startedAt ?? now,
         pid: process.pid,
+        processStartFingerprint: identity.processStartFingerprint,
+        processGroupId: identity.processGroupId,
+        detachedProcessGroup: process.env.NEURCODE_BRAIN_DETACHED_GROUP === '1',
+        elapsedMs: 0,
+        peakRssMb: Number((process.memoryUsage().rss / 1024 / 1024).toFixed(2)),
+        peakRssMeasurement: 'sampled_process_rss',
+        requestedLimits: input.requestedLimits,
+        progress: {
+            ...defaultStatus().progress,
+            phase: 'locked',
+        },
         reasonCodes: ['index_in_progress'],
     });
 }
-function markBrainIndexResult(repoRoot, result) {
+function recordBrainProgress(repoRoot, jobId, progress) {
+    const current = activeJobMatches(repoRoot, jobId);
+    if (!current || (current.state !== 'scheduled' && current.state !== 'building'))
+        return current;
+    const percent = progress.totalFiles && progress.totalFiles > 0
+        ? Math.min(100, Math.round((progress.filesIndexed / progress.totalFiles) * 100))
+        : null;
+    return writeBrainLifecycle(repoRoot, {
+        ...current,
+        state: 'building',
+        updatedAt: new Date().toISOString(),
+        elapsedMs: progress.elapsedMs,
+        peakRssMb: Math.max(current.peakRssMb ?? 0, progress.peakMemoryMb),
+        peakRssMeasurement: 'sampled_process_rss',
+        progress: {
+            phase: progress.phase,
+            filesScanned: progress.filesScanned,
+            filesIndexed: progress.filesIndexed,
+            totalFiles: progress.totalFiles,
+            bytesScanned: progress.bytesScanned,
+            nodes: progress.nodes,
+            edges: progress.edges,
+            percent,
+        },
+    });
+}
+function markBrainIndexResult(repoRoot, result, jobId) {
+    const previous = activeJobMatches(repoRoot, jobId) ?? readBrainLifecycle(repoRoot) ?? defaultStatus();
     const state = result.graph.coverage.filesIndexed === 0
         && result.graph.coverage.filesUnsupported > 0
         ? 'unsupported'
         : result.graph.freshness.state === 'partial' ? 'partial' : 'fresh';
+    const completedAt = new Date().toISOString();
     return writeBrainLifecycle(repoRoot, {
-        schemaVersion: exports.BRAIN_LIFECYCLE_SCHEMA_VERSION,
+        ...previous,
         state,
-        updatedAt: new Date().toISOString(),
-        startedAt: readBrainLifecycle(repoRoot)?.startedAt ?? null,
-        completedAt: new Date().toISOString(),
+        updatedAt: completedAt,
+        completedAt,
         pid: null,
+        processStartFingerprint: null,
+        processGroupId: null,
+        detachedProcessGroup: false,
+        elapsedMs: result.stats.durationMs,
+        peakRssMb: result.stats.peakMemoryMb,
+        peakRssMeasurement: 'sampled_process_rss',
         progress: {
+            phase: 'completed',
             filesScanned: result.stats.filesScanned,
             filesIndexed: result.graph.coverage.filesIndexed,
             totalFiles: result.graph.coverage.filesSeen,
+            bytesScanned: previous.progress.bytesScanned,
+            nodes: result.graph.nodes?.length ?? 0,
+            edges: result.graph.edges?.length ?? 0,
             percent: result.graph.coverage.filesSeen
                 ? Math.round((result.graph.coverage.filesIndexed / result.graph.coverage.filesSeen) * 100)
                 : 100,
@@ -174,14 +383,23 @@ function markBrainIndexResult(repoRoot, result) {
         recoveryCommands: recoveryCommands(),
     });
 }
-function markBrainFailed(repoRoot, reasonCode) {
-    const previous = readBrainLifecycle(repoRoot) ?? defaultStatus('failed');
+function markBrainFailed(repoRoot, reasonCode, jobId) {
+    const current = activeJobMatches(repoRoot, jobId);
+    if (jobId && !current)
+        return readBrainLifecycle(repoRoot) ?? defaultStatus('failed');
+    const previous = current ?? readBrainLifecycle(repoRoot) ?? defaultStatus('failed');
+    const completedAt = new Date().toISOString();
+    const started = Date.parse(previous.startedAt ?? '');
     return writeBrainLifecycle(repoRoot, {
         ...previous,
         state: 'failed',
-        updatedAt: new Date().toISOString(),
-        completedAt: new Date().toISOString(),
+        updatedAt: completedAt,
+        completedAt,
         pid: null,
+        processStartFingerprint: null,
+        processGroupId: null,
+        detachedProcessGroup: false,
+        elapsedMs: Number.isFinite(started) ? Math.max(0, Date.now() - started) : previous.elapsedMs,
         reasonCodes: [reasonCode],
         recoveryCommands: recoveryCommands(),
     });
@@ -190,19 +408,26 @@ async function scheduleBrainIndex(repoRoot, options = {}) {
     const current = await inspectBrainLifecycle(repoRoot);
     if (!options.force && (current.state === 'fresh' || current.state === 'partial'))
         return current;
-    if (!options.force && (current.state === 'scheduled' || current.state === 'building') && pidAlive(current.pid))
+    if (!options.force && (current.state === 'scheduled' || current.state === 'building') && runningIdentity(current) === 'alive_same') {
         return current;
+    }
+    const requestedLimits = {
+        maxFiles: options.maxFiles ?? 8_000,
+        maxTotalBytes: options.maxTotalBytes ?? 256 * 1024 * 1024,
+        maxBytesPerFile: options.maxBytesPerFile ?? 350_000,
+    };
+    const jobId = (0, node_crypto_1.randomUUID)();
     const cliEntry = (0, cli_entry_1.getActiveCliEntry)();
     const args = [
         cliEntry,
         'brain',
         'repo-index',
         '--max-files',
-        String(options.maxFiles ?? 8_000),
+        String(requestedLimits.maxFiles),
         '--max-total-bytes',
-        String(options.maxTotalBytes ?? 256 * 1024 * 1024),
+        String(requestedLimits.maxTotalBytes),
         '--max-bytes-per-file',
-        String(options.maxBytesPerFile ?? 350_000),
+        String(requestedLimits.maxBytesPerFile),
         '--json',
     ];
     const child = (0, node_child_process_1.spawn)(process.execPath, args, {
@@ -212,26 +437,46 @@ async function scheduleBrainIndex(repoRoot, options = {}) {
         env: {
             ...process.env,
             NEURCODE_BRAIN_LIFECYCLE_CHILD: '1',
+            NEURCODE_BRAIN_JOB_ID: jobId,
+            NEURCODE_BRAIN_INDEX_SOURCE: 'auto',
+            NEURCODE_BRAIN_DETACHED_GROUP: '1',
             NEURCODE_CLI_SPAWN_ENTRY: cliEntry,
         },
     });
     child.once('error', () => {
-        markBrainFailed(repoRoot, 'index_spawn_failed');
+        markBrainFailed(repoRoot, 'index_spawn_failed', jobId);
     });
     child.unref();
+    const identity = child.pid
+        ? (0, brain_1.createOwnedProcessIdentity)({ jobId, pid: child.pid, processGroupId: child.pid })
+        : null;
+    const now = new Date().toISOString();
     return writeBrainLifecycle(repoRoot, {
         ...defaultStatus('scheduled'),
         state: 'scheduled',
-        startedAt: new Date().toISOString(),
+        jobId,
+        source: 'auto',
+        startedAt: now,
+        updatedAt: now,
         pid: child.pid ?? null,
+        processStartFingerprint: identity?.processStartFingerprint ?? null,
+        processGroupId: child.pid ?? null,
+        detachedProcessGroup: true,
+        requestedLimits,
         reasonCodes: ['activation_scheduled_index'],
     });
 }
-function cancelBrainIndex(repoRoot) {
+async function cancelBrainIndex(repoRoot) {
     const current = readBrainLifecycle(repoRoot) ?? defaultStatus('missing');
-    if (pidAlive(current.pid)) {
-        process.kill(current.pid, 'SIGTERM');
+    if (current.reasonCodes.includes('cancelled_by_operator') && current.state === 'failed') {
+        releaseAbandonedGraphLocks(repoRoot);
+        return current;
+    }
+    const outcome = await terminateIndexWorker(current);
+    releaseAbandonedGraphLocks(repoRoot);
+    if (outcome === 'identity_mismatch') {
+        return markBrainFailed(repoRoot, 'cancel_identity_mismatch', current.jobId ?? undefined);
     }
-    return markBrainFailed(repoRoot, 'cancelled_by_operator');
+    return markBrainFailed(repoRoot, 'cancelled_by_operator', current.jobId ?? undefined);
 }
 //# sourceMappingURL=brain-lifecycle.js.map