@neuranix/mcp-server 1.4.0 → 1.5.0

package/dist/helpers.d.ts

@@ -12,4 +12,9 @@ export declare function formatRecall(data: Record<string, unknown>): string;
 export declare function formatStatus(data: Record<string, unknown>): string;
 export declare function formatGetNode(data: Record<string, unknown>): string;
 export declare function formatEdges(data: Record<string, unknown>): string;
+export declare function formatProjectReport(data: Record<string, unknown>): string;
+export declare function formatBenchmark(data: Record<string, unknown>): string;
+export declare function formatWiki(data: Record<string, unknown>): string;
+export declare function formatCodebaseIndex(data: Record<string, unknown>): string;
+export declare function formatCodebaseQuery(data: Record<string, unknown>): string;
 //# sourceMappingURL=helpers.d.ts.map

package/dist/helpers.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"helpers.d.ts","sourceRoot":"","sources":["../src/helpers.ts"],"names":[],"mappings":"AAAA,yDAAyD;AAEzD,wBAAgB,SAAS,CACvB,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,EACzC,GAAG,EAAE,MAAM,GACV,MAAM,GAAG,SAAS,CAGpB;AAED,wBAAgB,eAAe,CAC7B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,EACzC,GAAG,EAAE,MAAM,GACV,MAAM,GAAG,SAAS,CAUpB;AAED,6EAA6E;AAC7E,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,GAAG,MAAM,GAAG,SAAS,CAMhG;AAED;;GAEG;AACH,wBAAgB,eAAe,CAC7B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,EACzC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAC5B,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CA2CzB;AAED,wBAAgB,aAAa,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAcnE;AAED,wBAAgB,YAAY,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CA+ClE;AAED,wBAAgB,YAAY,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAiDlE;AAED,wBAAgB,aAAa,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAenE;AAED,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAWjE;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAiBzE;AAED,wBAAgB,eAAe,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAmBrE;AAED,wBAAgB,UAAU,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAgBhE;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAWzE;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,MAAM,CAkBzE"}

package/dist/helpers.js

@@ -78,16 +78,30 @@ export function formatRecall(data) {
         return framed;
     }
     const memories = (data.memories ?? data.results ?? []);
+    // Filter out low-relevance memories to reduce token waste
+    const minScore = 0.35;
+    const maxResults = 10;
+    const filtered = memories.filter((m) => {
+        const score = m.hybrid_score ?? m.similarity_score ?? m.relevance_score ?? 0;
+        return score >= minScore || m.memory_status === "active";
+    });
+    const displayed = filtered.slice(0, maxResults);
+    const omitted = memories.length - displayed.length;
     const lines = [
-        `## Neuranix Recall (${data.total ?? memories.length} matches)`,
+        `## Neuranix Recall (${displayed.length}/${data.total ?? memories.length} matches)`,
         `Query: ${data.query ?? "—"}`,
         "",
         "Use apenas entradas active alinhadas à tarefa atual.",
         "",
     ];
-    for (const m of memories.slice(0, 15)) {
+    for (const m of displayed) {
         const status = m.memory_status && m.memory_status !== "active" ? ` [${m.memory_status}]` : "";
-        lines.push(`- [${m.type ?? "memory"}${status}] ${m.summary ?? m.content ?? ""}`);
+        const score = m.hybrid_score ?? m.similarity_score;
+        const scoreLabel = score != null ? ` (${score.toFixed(2)})` : "";
+        lines.push(`- [${m.type ?? "memory"}${status}${scoreLabel}] ${m.summary ?? m.content ?? ""}`);
+    }
+    if (omitted > 0) {
+        lines.push("", `_${omitted} memória(s) com baixa relevância omitidas._`);
     }
     return lines.join("\n");
 }
@@ -98,6 +112,10 @@ export function formatStatus(data) {
     const embeddings = (health.embeddings ?? {});
     const issues = health.issues ?? [];
     const warnings = health.warnings ?? [];
+    const coverageRaw = embeddings.coverage;
+    const coverageDisplay = typeof coverageRaw === "number"
+        ? `${(coverageRaw * 100).toFixed(1)}%`
+        : `${coverageRaw ?? "—"}%`;
     const lines = [
         "## Neuranix Status",
         `API: **${status}**`,
@@ -106,12 +124,14 @@ export function formatStatus(data) {
         "",
         "### Embeddings",
         `- Enabled: ${embeddings.enabled ?? "—"}`,
-        `- Coverage: ${embeddings.coverage ?? "—"}%`,
+        `- Coverage: ${coverageDisplay}`,
         `- Pending: ${embeddings.pending ?? "—"}`,
+        `- Async: ${embeddings.async ?? "—"}`,
         "",
         "### Queue",
         `- Status: ${queue.status ?? "—"} — ${queue.label ?? ""}`,
         `- Pending jobs: ${queue.pending_jobs ?? "—"}`,
+        `- User pending embeddings: ${queue.user_pending_embeddings ?? "—"}`,
     ];
     if (issues.length > 0) {
         lines.push("", "### Issues", ...issues.map((i) => `- ${i}`));
@@ -150,7 +170,94 @@ export function formatEdges(data) {
         return "No relations found for this node.";
     const lines = [`### Relations for node ${data.memory_id}`, ""];
     for (const edge of edges) {
-        lines.push(`- **${edge.relation}** -> [${edge.target_type ?? "memory"}] ${edge.to} (${edge.target_summary ?? "no summary"})`);
+        const conf = edge.confidence ? ` [${edge.confidence}]` : "";
+        lines.push(`- **${edge.relation}**${conf} -> [${edge.target_type ?? "memory"}] ${edge.to} (${edge.target_summary ?? "no summary"})`);
+    }
+    return lines.join("\n");
+}
+export function formatProjectReport(data) {
+    if (typeof data.markdown === "string" && data.markdown.trim()) {
+        return data.markdown;
+    }
+    const report = data.report ?? data;
+    if (typeof report.markdown === "string" && report.markdown.trim()) {
+        return report.markdown;
+    }
+    const proj = report.project?.name ?? "Project";
+    const tokens = report.token_analysis;
+    return [
+        `# 🧠 Project Intelligence Report: ${proj}`,
+        `- God nodes: ${report.god_nodes?.length ?? 0}`,
+        `- Surprising connections: ${report.surprising_connections?.length ?? 0}`,
+        `- Knowledge gaps: ${report.knowledge_gaps?.length ?? 0}`,
+        `- Token reduction: ${tokens?.reduction_factor ?? "—"}x (${tokens?.savings_percentage ?? "—"}% savings)`,
+    ].join("\n");
+}
+export function formatBenchmark(data) {
+    const b = data.benchmark ?? data;
+    const lines = [
+        `## 📊 Neuranix Token Benchmark`,
+        `- **Reduction Factor:** **${b.reduction_factor ?? "1.0"}x**`,
+        `- **Token Savings:** **${b.savings_percentage ?? "0"}%**`,
+        `- **Full Corpus Tokens:** ~${b.corpus_tokens?.toLocaleString() ?? 0}`,
+        `- **Avg Query Tokens:** ~${b.avg_query_tokens?.toLocaleString() ?? 0}`,
+        `- **Memories Evaluated:** ${b.memories_count ?? 0}`,
+        "",
+        b.summary ?? "",
+    ];
+    if (b.query_breakdown && typeof b.query_breakdown === "object") {
+        lines.push("", "### Sample Query Breakdown:");
+        for (const [q, tok] of Object.entries(b.query_breakdown)) {
+            lines.push(`- *"${q}"*: ~${tok} tokens`);
+        }
+    }
+    return lines.filter(Boolean).join("\n");
+}
+export function formatWiki(data) {
+    const toc = (data.table_of_contents ?? []);
+    const articles = (data.articles ?? {});
+    const lines = [
+        `## 📖 Neuranix Project Wiki`,
+        data.summary ? String(data.summary) : "",
+        "",
+        "### Table of Contents:",
+    ];
+    for (const item of toc) {
+        lines.push(`- **${item.title}** (\`${item.path}\`)`);
+    }
+    if (articles["index.md"]) {
+        lines.push("", "---", "", articles["index.md"]);
+    }
+    return lines.join("\n");
+}
+export function formatCodebaseIndex(data) {
+    const stats = (data.stats ?? {});
+    return [
+        `## 🌲 Codebase AST Indexing Complete`,
+        `- **Workspace:** ${data.workspace ?? "—"}`,
+        `- **Files Scanned:** ${stats.total_files_scanned ?? 0}`,
+        `- **Files Re-indexed:** ${stats.files_reindexed ?? 0}`,
+        `- **Files from SHA256 Cache:** ${stats.files_cached_sha256 ?? 0}`,
+        `- **Total AST Nodes:** ${stats.total_ast_nodes ?? data.nodes_count ?? 0}`,
+        `- **Total AST Edges:** ${stats.total_ast_edges ?? data.edges_count ?? 0}`,
+    ].join("\n");
+}
+export function formatCodebaseQuery(data) {
+    const matches = (data.matches ?? []);
+    const edges = (data.edges ?? []);
+    const lines = [
+        `## 🔍 Codebase Structure Query: "${data.query}"`,
+        `Found ${matches.length} matching symbol(s):`,
+        "",
+    ];
+    for (const m of matches.slice(0, 15)) {
+        lines.push(`- **[${m.type}] ${m.label}** (${m.path ?? "—"})`);
+    }
+    if (edges.length > 0) {
+        lines.push("", "### Structural Relations:");
+        for (const e of edges.slice(0, 15)) {
+            lines.push(`- \`${e.relation}\`: ${e.from} → ${e.to} [${e.confidence ?? "EXTRACTED"}]`);
+        }
     }
     return lines.join("\n");
 }

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package/dist/index.js

@@ -4,7 +4,7 @@ import { StdioServerTransport } from "@modelcontextprotocol/sdk/server/stdio.js"
 import { CallToolRequestSchema, GetPromptRequestSchema, ListPromptsRequestSchema, ListResourcesRequestSchema, ListToolsRequestSchema, ReadResourceRequestSchema, } from "@modelcontextprotocol/sdk/types.js";
 import { apiCall, pingApi } from "./api.js";
 import { resolveApiBaseUrl, validateApiKey } from "./config.js";
-import { buildPromptBody, formatContext, formatRecall, formatStatus, promptArg, formatGetNode, formatEdges, } from "./helpers.js";
+import { buildPromptBody, formatContext, formatRecall, formatStatus, promptArg, formatGetNode, formatEdges, formatProjectReport, formatBenchmark, formatWiki, formatCodebaseIndex, formatCodebaseQuery, } from "./helpers.js";
 import { ideSetupMarkdown } from "./ide-files.js";
 import { NEURANIX_PROMPTS, SERVER_INSTRUCTIONS } from "./prompts.js";
 import { IDE_SETUP_URI, USAGE_GUIDE_MARKDOWN, USAGE_GUIDE_URI } from "./resources.js";
@@ -45,6 +45,12 @@ server.setRequestHandler(ListResourcesRequestSchema, async () => ({
             description: "Optional repo files per IDE (npx @neuranix/mcp-server setup)",
             mimeType: "text/markdown",
         },
+        {
+            uri: "neuranix://project-wiki",
+            name: "Neuranix Project Wiki",
+            description: "Wikipedia-style knowledge base vault for cross-platform portability",
+            mimeType: "text/markdown",
+        },
     ],
 }));
 server.setRequestHandler(ReadResourceRequestSchema, async (request) => {
@@ -70,6 +76,18 @@ server.setRequestHandler(ReadResourceRequestSchema, async (request) => {
             ],
         };
     }
+    if (request.params.uri === "neuranix://project-wiki") {
+        const data = await callMemory({ action: "wiki" });
+        return {
+            contents: [
+                {
+                    uri: "neuranix://project-wiki",
+                    mimeType: "text/markdown",
+                    text: formatWiki(data),
+                },
+            ],
+        };
+    }
     throw new Error(`Unknown resource: ${request.params.uri}`);
 });
 server.setRequestHandler(ListPromptsRequestSchema, async () => ({
@@ -244,6 +262,21 @@ server.setRequestHandler(CallToolRequestSchema, async (request) => {
         if (data.action === "edges") {
             return { content: [{ type: "text", text: formatEdges(data) }] };
         }
+        if (data.action === "project_report") {
+            return { content: [{ type: "text", text: formatProjectReport(data) }] };
+        }
+        if (data.action === "benchmark") {
+            return { content: [{ type: "text", text: formatBenchmark(data) }] };
+        }
+        if (data.action === "wiki") {
+            return { content: [{ type: "text", text: formatWiki(data) }] };
+        }
+        if (data.action === "codebase_index") {
+            return { content: [{ type: "text", text: formatCodebaseIndex(data) }] };
+        }
+        if (data.action === "codebase_query") {
+            return { content: [{ type: "text", text: formatCodebaseQuery(data) }] };
+        }
         if (data.action === "list") {
             const memories = (data.memories ?? []);
             const lines = [`## Neuranix List (${data.total ?? memories.length} memories)`, ""];

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/prompts.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"prompts.d.ts","sourceRoot":"","sources":["../src/prompts.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,oCAAoC,CAAC;AAqBjE,eAAO,MAAM,gBAAgB,EAAE,MAAM,EAoGpC,CAAC;AAEF,eAAO,MAAM,mBAAmB,QAarB,CAAC"}

package/dist/prompts.js

@@ -116,9 +116,10 @@ export const SERVER_INSTRUCTIONS = [
     "Always pass task_context (current conversation focus) on context/recall/store/checkpoint.",
     "SESSION START (mandatory): call neuranix_context with workspace_path + task_context. Optionally neuranix_status if API errors occur.",
     "AFTER context compaction: call neuranix_context again (or prompt after_compaction).",
-    "BEFORE complex tasks: call neuranix_recall with query + workspace_path + task_context.",
+    "BEFORE complex tasks: call neuranix_recall with query + workspace_path + task_context, or neuranix_expand for multi-hop graph context.",
     "AFTER decisions/fixes/patterns: call neuranix_store with content + workspace_path + task_context.",
     "SESSION END or major task done: call neuranix_checkpoint with summary + workspace_path.",
+    "ARCHITECTURE & INTEL: call neuranix_project_report for god nodes & gaps, neuranix_benchmark for token savings, neuranix_wiki for vault generation, and neuranix_codebase_index/query for AST structure.",
     "On API/auth errors: call neuranix_status to diagnose before retrying.",
     "Read resource neuranix://agent-guide when unsure. Optional repo files: npx -y @neuranix/mcp-server setup",
     "Claude Code prompts: session_start, before_task, save_decision, session_end, after_compaction, health_check.",

package/dist/prompts.js.map

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package/dist/resources.d.ts

@@ -1,4 +1,4 @@
 export declare const USAGE_GUIDE_URI = "neuranix://agent-guide";
 export declare const IDE_SETUP_URI = "neuranix://ide-setup";
-export declare const USAGE_GUIDE_MARKDOWN = "# Neuranix \u2014 Guia do agente (v1.4.0)\n\nProtocolo aut\u00F4nomo: ao conectar o MCP, o agente recebe instru\u00E7\u00F5es para recuperar contexto no in\u00EDcio e salvar no fim \u2014 voc\u00EA n\u00E3o precisa pedir para lembrar.\n\n## Ciclo autom\u00E1tico (obrigat\u00F3rio \u2014 sem pedido do usu\u00E1rio)\n\n| Momento | Tool MCP |\n|---------|----------|\n| In\u00EDcio da sess\u00E3o / ap\u00F3s compacta\u00E7\u00E3o | `neuranix_context` ou `neuranix_canon` |\n| Antes de refactor, debug, review, arquitetura | `neuranix_recall` ou `neuranix_expand` |\n| Ap\u00F3s decis\u00E3o t\u00E9cnica, fix ou padr\u00E3o | `neuranix_store` |\n| Fim de sess\u00E3o ou tarefa grande conclu\u00EDda | `neuranix_checkpoint` |\n| Diagn\u00F3stico de API / auth | `neuranix_status` |\n\nSempre passe `workspace_path` absoluto do reposit\u00F3rio e `task_context` (foco da conversa).\n\n## Perfis (mode)\n- `debug` \u2014 erros e troubleshooting\n- `code_review` \u2014 revis\u00E3o de c\u00F3digo\n- `architecture` \u2014 decis\u00F5es de design\n- `code_generation` \u2014 implementa\u00E7\u00E3o\n- `conversation` \u2014 contexto geral\n\n## Prompts MCP (Claude Code e compat\u00EDveis)\n- `/mcp__neuranix__session_start`\n- `/mcp__neuranix__before_task`\n- `/mcp__neuranix__save_decision`\n- `/mcp__neuranix__session_end`\n- `/mcp__neuranix__after_compaction`\n- `/mcp__neuranix__health_check`\n\n## Grafo estruturado (v1.4+)\n- `neuranix_canon` \u2014 s\u00F3 camada comprimida (menos tokens)\n- `neuranix_expand` \u2014 recall + 1 hop no grafo de rela\u00E7\u00F5es\n- `neuranix_get_node` / `neuranix_edges` \u2014 navega\u00E7\u00E3o cir\u00FArgica por n\u00F3\n\n## Regra de ouro\nN\u00E3o espere o usu\u00E1rio pedir mem\u00F3ria. Em toda tarefa n\u00E3o trivial: context \u2192 trabalho \u2192 store/checkpoint.\n\n## Protocolo completo\n\n## Mem\u00F3ria persistente (Neuranix) \u2014 protocolo autom\u00E1tico\n\nVoc\u00EA tem mem\u00F3ria cognitiva em nuvem via MCP. **O usu\u00E1rio N\u00C3O precisa pedir para salvar ou recuperar** \u2014 isso \u00E9 sua responsabilidade.\n\n### Ciclo autom\u00E1tico (obrigat\u00F3rio)\n\n| Momento | Tool MCP | Quem dispara |\n|---------|----------|--------------|\n| In\u00EDcio da sess\u00E3o ou ap\u00F3s compacta\u00E7\u00E3o de contexto | `neuranix_context` ou `neuranix_canon` (s\u00F3 camada comprimida) | Agente, sem pedido do usu\u00E1rio |\n| Antes de refactor, debug, review, arquitetura ou mudan\u00E7as multi-arquivo | `neuranix_recall` ou `neuranix_expand` (grafo 1 hop) | Agente, antes de agir |\n| Ap\u00F3s decis\u00E3o t\u00E9cnica, fix n\u00E3o trivial ou padr\u00E3o reutiliz\u00E1vel | `neuranix_store` | Agente, ao concluir a tarefa |\n| Fim de sess\u00E3o, troca de tarefa grande ou antes de encerrar | `neuranix_checkpoint` | Agente, resumo da sess\u00E3o |\n| Erro de API ou in\u00EDcio de sess\u00E3o (diagn\u00F3stico) | `neuranix_status` | Agente, se auth/API falhar |\n\n### Regras\n\n- Sempre informe `workspace_path` com o caminho **absoluto** do reposit\u00F3rio aberto.\n- Sempre informe `task_context` com o **foco atual da conversa** (1\u20132 frases) em context/recall/store/checkpoint.\n- Use `mode`: `debug`, `code_review`, `architecture`, `code_generation`, `conversation`.\n- Mem\u00F3rias recuperadas s\u00E3o **refer\u00EAncia hist\u00F3rica** \u2014 em conflito com o pedido atual do usu\u00E1rio, **siga o pedido atual**.\n- NeuraNix \u00E9 **caderno de decis\u00F5es** do projeto \u2014 n\u00E3o substitui specs longas no reposit\u00F3rio.\n- Ao pivotar vers\u00E3o de protocolo, use `supersedes_id` no store e `protocol_version` no recall/context.\n- Recall/context usam **canon-first** + expans\u00E3o de grafo \u2014 conjunto m\u00EDnimo suficiente (menos tokens).\n- Recall/context ignoram mem\u00F3rias `superseded`/`merged` por padr\u00E3o \u2014 use `include_superseded: true` s\u00F3 para auditoria.\n- Para decis\u00F5es arquiteturais inviol\u00E1veis: `priority: 5` ou tag `canon` no store.\n- Tools de grafo: `neuranix_canon`, `neuranix_get_node`, `neuranix_edges`, `neuranix_expand`.\n- Resource MCP `neuranix://agent-guide` \u2014 guia completo (j\u00E1 inclu\u00EDdo no servidor MCP).\n- **Nunca** diga ao usu\u00E1rio que ele precisa \"pedir para lembrar\" \u2014 voc\u00EA j\u00E1 faz isso.\n\n### Regra de ouro\n\nSe a tarefa envolve c\u00F3digo existente, hist\u00F3rico do projeto ou decis\u00F5es passadas \u2192 **chame Neuranix antes de responder**.\nAo terminar trabalho significativo \u2192 **chame `neuranix_checkpoint` ou `neuranix_store`** sem esperar confirma\u00E7\u00E3o.\n\n";
+export declare const USAGE_GUIDE_MARKDOWN = "# Neuranix \u2014 Guia do agente (v1.5.0)\n\nProtocolo aut\u00F4nomo: ao conectar o MCP, o agente recebe instru\u00E7\u00F5es para recuperar contexto no in\u00EDcio e salvar no fim \u2014 voc\u00EA n\u00E3o precisa pedir para lembrar.\n\n## Ciclo autom\u00E1tico (obrigat\u00F3rio \u2014 sem pedido do usu\u00E1rio)\n\n| Momento | Tool MCP |\n|---------|----------|\n| In\u00EDcio da sess\u00E3o / ap\u00F3s compacta\u00E7\u00E3o | `neuranix_context` ou `neuranix_canon` |\n| Antes de refactor, debug, review, arquitetura | `neuranix_recall` ou `neuranix_expand` |\n| Ap\u00F3s decis\u00E3o t\u00E9cnica, fix ou padr\u00E3o | `neuranix_store` |\n| Fim de sess\u00E3o ou tarefa grande conclu\u00EDda | `neuranix_checkpoint` |\n| Diagn\u00F3stico de API / auth | `neuranix_status` |\n\nSempre passe `workspace_path` absoluto do reposit\u00F3rio e `task_context` (foco da conversa).\n\n## Perfis (mode)\n- `debug` \u2014 erros e troubleshooting\n- `code_review` \u2014 revis\u00E3o de c\u00F3digo\n- `architecture` \u2014 decis\u00F5es de design\n- `code_generation` \u2014 implementa\u00E7\u00E3o\n- `conversation` \u2014 contexto geral\n\n## Prompts MCP (Claude Code e compat\u00EDveis)\n- `/mcp__neuranix__session_start`\n- `/mcp__neuranix__before_task`\n- `/mcp__neuranix__save_decision`\n- `/mcp__neuranix__session_end`\n- `/mcp__neuranix__after_compaction`\n- `/mcp__neuranix__health_check`\n\n## Grafo cognitivo & intelig\u00EAncia arquitetural (v1.4+)\n- `neuranix_canon` \u2014 s\u00F3 camada comprimida (menos tokens)\n- `neuranix_expand` \u2014 recall + expans\u00E3o multi-hop (depth 1\u20135) no grafo\n- `neuranix_get_node` / `neuranix_edges` \u2014 navega\u00E7\u00E3o cir\u00FArgica por n\u00F3 com n\u00EDveis de confian\u00E7a (EXTRACTED, INFERRED, AMBIGUOUS)\n- `neuranix_project_report` \u2014 diagn\u00F3stico com god nodes, conex\u00F5es surpreendentes e lacunas\n- `neuranix_benchmark` \u2014 m\u00E9tricas de redu\u00E7\u00E3o e economia de tokens\n- `neuranix_wiki` \u2014 exporta\u00E7\u00E3o de vault markdown no formato wiki (ou resource neuranix://project-wiki)\n- `neuranix_codebase_index` / `neuranix_codebase_query` \u2014 an\u00E1lise e consulta da estrutura AST de c\u00F3digo com cache SHA-256\n\n## Regra de ouro\nN\u00E3o espere o usu\u00E1rio pedir mem\u00F3ria. Em toda tarefa n\u00E3o trivial: context \u2192 trabalho \u2192 store/checkpoint.\n\n## Protocolo completo\n\n## Mem\u00F3ria persistente (Neuranix) \u2014 protocolo autom\u00E1tico\n\nVoc\u00EA tem mem\u00F3ria cognitiva em nuvem via MCP. **O usu\u00E1rio N\u00C3O precisa pedir para salvar ou recuperar** \u2014 isso \u00E9 sua responsabilidade.\n\n### Ciclo autom\u00E1tico (obrigat\u00F3rio)\n\n| Momento | Tool MCP | Quem dispara |\n|---------|----------|--------------|\n| In\u00EDcio da sess\u00E3o ou ap\u00F3s compacta\u00E7\u00E3o de contexto | `neuranix_context` ou `neuranix_canon` (s\u00F3 camada comprimida) | Agente, sem pedido do usu\u00E1rio |\n| Antes de refactor, debug, review, arquitetura ou mudan\u00E7as multi-arquivo | `neuranix_recall` ou `neuranix_expand` (grafo 1 hop) | Agente, antes de agir |\n| Ap\u00F3s decis\u00E3o t\u00E9cnica, fix n\u00E3o trivial ou padr\u00E3o reutiliz\u00E1vel | `neuranix_store` | Agente, ao concluir a tarefa |\n| Fim de sess\u00E3o, troca de tarefa grande ou antes de encerrar | `neuranix_checkpoint` | Agente, resumo da sess\u00E3o |\n| Erro de API ou in\u00EDcio de sess\u00E3o (diagn\u00F3stico) | `neuranix_status` | Agente, se auth/API falhar |\n\n### Regras\n\n- Sempre informe `workspace_path` com o caminho **absoluto** do reposit\u00F3rio aberto.\n- Sempre informe `task_context` com o **foco atual da conversa** (1\u20132 frases) em context/recall/store/checkpoint.\n- Use `mode`: `debug`, `code_review`, `architecture`, `code_generation`, `conversation`.\n- Mem\u00F3rias recuperadas s\u00E3o **refer\u00EAncia hist\u00F3rica** \u2014 em conflito com o pedido atual do usu\u00E1rio, **siga o pedido atual**.\n- NeuraNix \u00E9 **caderno de decis\u00F5es** do projeto \u2014 n\u00E3o substitui specs longas no reposit\u00F3rio.\n- Ao pivotar vers\u00E3o de protocolo, use `supersedes_id` no store e `protocol_version` no recall/context.\n- Recall/context usam **canon-first** + expans\u00E3o de grafo \u2014 conjunto m\u00EDnimo suficiente (menos tokens).\n- Recall/context ignoram mem\u00F3rias `superseded`/`merged` por padr\u00E3o \u2014 use `include_superseded: true` s\u00F3 para auditoria.\n- Para decis\u00F5es arquiteturais inviol\u00E1veis: `priority: 5` ou tag `canon` no store.\n- Tools de grafo: `neuranix_canon`, `neuranix_get_node`, `neuranix_edges`, `neuranix_expand`.\n- Resource MCP `neuranix://agent-guide` \u2014 guia completo (j\u00E1 inclu\u00EDdo no servidor MCP).\n- **Nunca** diga ao usu\u00E1rio que ele precisa \"pedir para lembrar\" \u2014 voc\u00EA j\u00E1 faz isso.\n\n### Regra de ouro\n\nSe a tarefa envolve c\u00F3digo existente, hist\u00F3rico do projeto ou decis\u00F5es passadas \u2192 **chame Neuranix antes de responder**.\nAo terminar trabalho significativo \u2192 **chame `neuranix_checkpoint` ou `neuranix_store`** sem esperar confirma\u00E7\u00E3o.\n\n";
 //# sourceMappingURL=resources.d.ts.map

package/dist/resources.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"resources.d.ts","sourceRoot":"","sources":["../src/resources.ts"],"names":[],"mappings":"AAGA,eAAO,MAAM,eAAe,2BAA2B,CAAC;AACxD,eAAO,MAAM,aAAa,yBAAyB,CAAC;AAEpD,eAAO,MAAM,oBAAoB,4iKA8ChC,CAAC"}

package/dist/resources.js

@@ -32,10 +32,14 @@ Sempre passe \`workspace_path\` absoluto do repositório e \`task_context\` (foc
 - \`/mcp__neuranix__after_compaction\`
 - \`/mcp__neuranix__health_check\`
 
-## Grafo estruturado (v1.4+)
+## Grafo cognitivo & inteligência arquitetural (v1.4+)
 - \`neuranix_canon\` — só camada comprimida (menos tokens)
-- \`neuranix_expand\` — recall + 1 hop no grafo de relações
-- \`neuranix_get_node\` / \`neuranix_edges\` — navegação cirúrgica por nó
+- \`neuranix_expand\` — recall + expansão multi-hop (depth 1–5) no grafo
+- \`neuranix_get_node\` / \`neuranix_edges\` — navegação cirúrgica por nó com níveis de confiança (EXTRACTED, INFERRED, AMBIGUOUS)
+- \`neuranix_project_report\` — diagnóstico com god nodes, conexões surpreendentes e lacunas
+- \`neuranix_benchmark\` — métricas de redução e economia de tokens
+- \`neuranix_wiki\` — exportação de vault markdown no formato wiki (ou resource neuranix://project-wiki)
+- \`neuranix_codebase_index\` / \`neuranix_codebase_query\` — análise e consulta da estrutura AST de código com cache SHA-256
 
 ## Regra de ouro
 Não espere o usuário pedir memória. Em toda tarefa não trivial: context → trabalho → store/checkpoint.

package/dist/resources.js.map

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+{"version":3,"file":"resources.js","sourceRoot":"","sources":["../src/resources.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,aAAa,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,MAAM,YAAY,CAAC;AAG/E,MAAM,CAAC,MAAM,eAAe,GAAG,wBAAwB,CAAC;AACxD,MAAM,CAAC,MAAM,aAAa,GAAG,sBAAsB,CAAC;AAEpD,MAAM,CAAC,MAAM,oBAAoB,GAAG,iCAAiC,gBAAgB;;EAEnF,gBAAgB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA2ChB,aAAa;CACd,CAAC"}

package/dist/rules.d.ts

@@ -1,5 +1,5 @@
 /** Single source of truth for Neuranix agent protocol (all IDEs). */
-export declare const PROTOCOL_VERSION = "1.4.0";
+export declare const PROTOCOL_VERSION = "1.5.0";
 export declare const CORE_PROTOCOL = "## Mem\u00F3ria persistente (Neuranix) \u2014 protocolo autom\u00E1tico\n\nVoc\u00EA tem mem\u00F3ria cognitiva em nuvem via MCP. **O usu\u00E1rio N\u00C3O precisa pedir para salvar ou recuperar** \u2014 isso \u00E9 sua responsabilidade.\n\n### Ciclo autom\u00E1tico (obrigat\u00F3rio)\n\n| Momento | Tool MCP | Quem dispara |\n|---------|----------|--------------|\n| In\u00EDcio da sess\u00E3o ou ap\u00F3s compacta\u00E7\u00E3o de contexto | `neuranix_context` ou `neuranix_canon` (s\u00F3 camada comprimida) | Agente, sem pedido do usu\u00E1rio |\n| Antes de refactor, debug, review, arquitetura ou mudan\u00E7as multi-arquivo | `neuranix_recall` ou `neuranix_expand` (grafo 1 hop) | Agente, antes de agir |\n| Ap\u00F3s decis\u00E3o t\u00E9cnica, fix n\u00E3o trivial ou padr\u00E3o reutiliz\u00E1vel | `neuranix_store` | Agente, ao concluir a tarefa |\n| Fim de sess\u00E3o, troca de tarefa grande ou antes de encerrar | `neuranix_checkpoint` | Agente, resumo da sess\u00E3o |\n| Erro de API ou in\u00EDcio de sess\u00E3o (diagn\u00F3stico) | `neuranix_status` | Agente, se auth/API falhar |\n\n### Regras\n\n- Sempre informe `workspace_path` com o caminho **absoluto** do reposit\u00F3rio aberto.\n- Sempre informe `task_context` com o **foco atual da conversa** (1\u20132 frases) em context/recall/store/checkpoint.\n- Use `mode`: `debug`, `code_review`, `architecture`, `code_generation`, `conversation`.\n- Mem\u00F3rias recuperadas s\u00E3o **refer\u00EAncia hist\u00F3rica** \u2014 em conflito com o pedido atual do usu\u00E1rio, **siga o pedido atual**.\n- NeuraNix \u00E9 **caderno de decis\u00F5es** do projeto \u2014 n\u00E3o substitui specs longas no reposit\u00F3rio.\n- Ao pivotar vers\u00E3o de protocolo, use `supersedes_id` no store e `protocol_version` no recall/context.\n- Recall/context usam **canon-first** + expans\u00E3o de grafo \u2014 conjunto m\u00EDnimo suficiente (menos tokens).\n- Recall/context ignoram mem\u00F3rias `superseded`/`merged` por padr\u00E3o \u2014 use `include_superseded: true` s\u00F3 para auditoria.\n- Para decis\u00F5es arquiteturais inviol\u00E1veis: `priority: 5` ou tag `canon` no store.\n- Tools de grafo: `neuranix_canon`, `neuranix_get_node`, `neuranix_edges`, `neuranix_expand`.\n- Resource MCP `neuranix://agent-guide` \u2014 guia completo (j\u00E1 inclu\u00EDdo no servidor MCP).\n- **Nunca** diga ao usu\u00E1rio que ele precisa \"pedir para lembrar\" \u2014 voc\u00EA j\u00E1 faz isso.\n\n### Regra de ouro\n\nSe a tarefa envolve c\u00F3digo existente, hist\u00F3rico do projeto ou decis\u00F5es passadas \u2192 **chame Neuranix antes de responder**.\nAo terminar trabalho significativo \u2192 **chame `neuranix_checkpoint` ou `neuranix_store`** sem esperar confirma\u00E7\u00E3o.\n";
 export declare const AGENTS_MD_FOOTER: string;
 export declare const CLAUDE_COMMANDS = "### Comandos MCP (Claude Code)\n\n| Comando | Quando (autom\u00E1tico pelo agente) |\n|---------|--------------------------------|\n| `/mcp__neuranix__session_start` | In\u00EDcio da sess\u00E3o |\n| `/mcp__neuranix__before_task` | Antes de tarefa complexa |\n| `/mcp__neuranix__save_decision` | Ap\u00F3s decis\u00E3o ou fix |\n| `/mcp__neuranix__session_end` | Fim da sess\u00E3o \u2014 checkpoint |\n| `/mcp__neuranix__after_compaction` | Ap\u00F3s compacta\u00E7\u00E3o de contexto |\n| `/mcp__neuranix__health_check` | Diagn\u00F3stico de API/conex\u00E3o |\n";

package/dist/rules.js

@@ -1,5 +1,5 @@
 /** Single source of truth for Neuranix agent protocol (all IDEs). */
-export const PROTOCOL_VERSION = "1.4.0";
+export const PROTOCOL_VERSION = "1.5.0";
 export const CORE_PROTOCOL = `## Memória persistente (Neuranix) — protocolo automático
 
 Você tem memória cognitiva em nuvem via MCP. **O usuário NÃO precisa pedir para salvar ou recuperar** — isso é sua responsabilidade.

package/dist/tools.d.ts

@@ -1,6 +1,6 @@
 import type { Tool } from "@modelcontextprotocol/sdk/types.js";
 export declare const NEURANIX_TOOLS: Tool[];
-export type MemoryAction = "context" | "store" | "recall" | "list" | "update" | "delete" | "status" | "canon" | "get_node" | "edges" | "expand";
+export type MemoryAction = "context" | "store" | "recall" | "list" | "update" | "delete" | "status" | "canon" | "get_node" | "edges" | "expand" | "project_report" | "benchmark" | "wiki" | "codebase_index" | "codebase_query";
 export declare function resolveToolCall(toolName: string, args: Record<string, unknown> | undefined): {
     action: MemoryAction;
     body: Record<string, unknown>;

package/dist/tools.d.ts.map

@@ -1 +1 @@
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package/dist/tools.js

@@ -196,7 +196,7 @@ export const NEURANIX_TOOLS = [
     },
     {
         name: "neuranix_expand",
-        description: "Graph-aware recall: semantic seed + 1-hop relation expansion. " +
+        description: "Graph-aware recall: semantic seed + multi-hop relation expansion. " +
             "Use before complex tasks when neuranix_recall may miss linked decisions.",
         inputSchema: {
             type: "object",
@@ -205,12 +205,83 @@ export const NEURANIX_TOOLS = [
                 workspace_path: workspacePath,
                 mode: modeEnum,
                 task_context: taskContext,
+                depth: { type: "integer", minimum: 1, maximum: 5, description: "Expansion depth (1 to 5 hops, default: 1)" },
                 limit: { type: "integer", minimum: 1, maximum: 20 },
             },
             required: ["query", "workspace_path"],
         },
         _meta: ALWAYS_LOAD,
     },
+    {
+        name: "neuranix_project_report",
+        description: "Generate project intelligence report (god nodes, surprising connections, knowledge gaps, and strategic questions). Use for onboarding or architectural reviews.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                workspace_path: workspacePath,
+                project_name: { type: "string", description: "Optional project name override" },
+                format: { type: "string", enum: ["summary", "detailed", "markdown"], description: "Report format" },
+            },
+            required: ["workspace_path"],
+        },
+        _meta: ALWAYS_LOAD,
+    },
+    {
+        name: "neuranix_benchmark",
+        description: "Measure token savings — compares full memory corpus tokens vs graph-based context retrieval.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                workspace_path: workspacePath,
+                project_name: { type: "string", description: "Optional project name override" },
+            },
+            required: ["workspace_path"],
+        },
+        _meta: ALWAYS_LOAD,
+    },
+    {
+        name: "neuranix_wiki",
+        description: "Generate Wikipedia-style markdown knowledge base vault for cross-platform context transfer.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                workspace_path: workspacePath,
+                project_name: { type: "string", description: "Optional project name override" },
+            },
+            required: ["workspace_path"],
+        },
+        _meta: ALWAYS_LOAD,
+    },
+    {
+        name: "neuranix_codebase_index",
+        description: "Index project codebase structure (classes, methods, imports, dependencies) with deterministic AST parsing and SHA256 cache.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                workspace_path: workspacePath,
+                project_name: { type: "string", description: "Optional project name override" },
+                languages: { type: "array", items: { type: "string" }, description: "Filter languages (e.g. ['php', 'ts', 'js'])" },
+                incremental: { type: "boolean", description: "Only re-index changed files (SHA256 cache). Default true" },
+            },
+            required: ["workspace_path"],
+        },
+        _meta: ALWAYS_LOAD,
+    },
+    {
+        name: "neuranix_codebase_query",
+        description: "Query codebase structure graph — find related classes, functions, dependency chains, and impacts.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                query: { type: "string", description: "Symbol or component name to query in codebase structure" },
+                workspace_path: workspacePath,
+                project_name: { type: "string", description: "Optional project name override" },
+                depth: { type: "integer", minimum: 1, maximum: 5, description: "Graph expansion depth" },
+            },
+            required: ["query", "workspace_path"],
+        },
+        _meta: ALWAYS_LOAD,
+    },
     {
         name: "neuranix_get_node",
         description: "Retrieve a single memory node by UUID (surgical load, minimal tokens).",
@@ -247,7 +318,26 @@ export const NEURANIX_TOOLS = [
                 content: { type: "string", description: "Learning to save (after significant work)" },
                 workspace_path: workspacePath,
                 project_name: { type: "string", description: "Optional project name override" },
-                action: { type: "string", enum: ["context", "store", "recall", "list", "update", "delete", "canon", "get_node", "edges", "expand"] },
+                action: {
+                    type: "string",
+                    enum: [
+                        "context",
+                        "store",
+                        "recall",
+                        "list",
+                        "update",
+                        "delete",
+                        "canon",
+                        "get_node",
+                        "edges",
+                        "expand",
+                        "project_report",
+                        "benchmark",
+                        "wiki",
+                        "codebase_index",
+                        "codebase_query",
+                    ],
+                },
                 memory_id: { type: "string", description: "UUID da memória (update/delete)" },
                 min_priority: storeFields.priority,
                 mode: modeEnum,
@@ -334,9 +424,60 @@ export function resolveToolCall(toolName, args) {
                     project_name,
                     action: "expand",
                     mode: args?.mode,
+                    depth: args?.depth,
                     limit: args?.limit,
                 }, args),
             };
+        case "neuranix_project_report":
+            return {
+                action: "project_report",
+                body: {
+                    workspace_path,
+                    project_name,
+                    action: "project_report",
+                    format: args?.format ?? "summary",
+                },
+            };
+        case "neuranix_benchmark":
+            return {
+                action: "benchmark",
+                body: {
+                    workspace_path,
+                    project_name,
+                    action: "benchmark",
+                },
+            };
+        case "neuranix_wiki":
+            return {
+                action: "wiki",
+                body: {
+                    workspace_path,
+                    project_name,
+                    action: "wiki",
+                },
+            };
+        case "neuranix_codebase_index":
+            return {
+                action: "codebase_index",
+                body: {
+                    workspace_path,
+                    project_name,
+                    action: "codebase_index",
+                    languages: args?.languages,
+                    incremental: args?.incremental,
+                },
+            };
+        case "neuranix_codebase_query":
+            return {
+                action: "codebase_query",
+                body: {
+                    workspace_path,
+                    project_name,
+                    action: "codebase_query",
+                    query: args?.query,
+                    depth: args?.depth,
+                },
+            };
         case "neuranix_get_node":
             return {
                 action: "get_node",

package/dist/tools.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@neuranix/mcp-server",
-    "version": "1.4.0",
+    "version": "1.5.0",
     "description": "Neuranix MCP Server — autonomous persistent memory for IDE AI agents (Cursor, VS Code, Claude Code, Windsurf)",
     "type": "module",
     "main": "dist/index.js",