@neat.is/core 0.3.3 → 0.3.4

package/dist/cli.cjs

@@ -101,8 +101,8 @@ function reshapeGrpcRequest(req) {
   };
 }
 function resolveProtoRoot() {
-  const here = import_node_path33.default.dirname((0, import_node_url.fileURLToPath)(importMetaUrl));
-  return import_node_path33.default.resolve(here, "..", "proto");
+  const here = import_node_path34.default.dirname((0, import_node_url.fileURLToPath)(importMetaUrl));
+  return import_node_path34.default.resolve(here, "..", "proto");
 }
 function loadTraceService() {
   const protoRoot = resolveProtoRoot();
@@ -157,13 +157,13 @@ async function startOtelGrpcReceiver(opts) {
     })
   };
 }
-var import_node_url, import_node_path33, grpc, protoLoader;
+var import_node_url, import_node_path34, grpc, protoLoader;
 var init_otel_grpc = __esm({
   "src/otel-grpc.ts"() {
     "use strict";
     init_cjs_shims();
     import_node_url = require("url");
-    import_node_path33 = __toESM(require("path"), 1);
+    import_node_path34 = __toESM(require("path"), 1);
     grpc = __toESM(require("@grpc/grpc-js"), 1);
     protoLoader = __toESM(require("@grpc/proto-loader"), 1);
     init_otel();
@@ -260,10 +260,10 @@ function parseOtlpRequest(body) {
 }
 function loadProtobufDecoder() {
   if (exportTraceServiceRequestType) return exportTraceServiceRequestType;
-  const here = import_node_path34.default.dirname((0, import_node_url2.fileURLToPath)(importMetaUrl));
-  const protoRoot = import_node_path34.default.resolve(here, "..", "proto");
+  const here = import_node_path35.default.dirname((0, import_node_url2.fileURLToPath)(importMetaUrl));
+  const protoRoot = import_node_path35.default.resolve(here, "..", "proto");
   const root = new import_protobufjs.default.Root();
-  root.resolvePath = (_origin, target) => import_node_path34.default.resolve(protoRoot, target);
+  root.resolvePath = (_origin, target) => import_node_path35.default.resolve(protoRoot, target);
   root.loadSync(
     "opentelemetry/proto/collector/trace/v1/trace_service.proto",
     { keepCase: true }
@@ -355,12 +355,12 @@ async function buildOtelReceiver(opts) {
   };
   return decorated;
 }
-var import_node_path34, import_node_url2, import_fastify2, import_protobufjs, exportTraceServiceRequestType;
+var import_node_path35, import_node_url2, import_fastify2, import_protobufjs, exportTraceServiceRequestType;
 var init_otel = __esm({
   "src/otel.ts"() {
     "use strict";
     init_cjs_shims();
-    import_node_path34 = __toESM(require("path"), 1);
+    import_node_path35 = __toESM(require("path"), 1);
     import_node_url2 = require("url");
     import_fastify2 = __toESM(require("fastify"), 1);
     import_protobufjs = __toESM(require("protobufjs"), 1);
@@ -380,7 +380,7 @@ __export(cli_exports, {
 });
 module.exports = __toCommonJS(cli_exports);
 init_cjs_shims();
-var import_node_path39 = __toESM(require("path"), 1);
+var import_node_path40 = __toESM(require("path"), 1);
 var import_node_fs25 = require("fs");
 
 // src/graph.ts
@@ -887,19 +887,19 @@ function confidenceFromMix(edges, now = Date.now()) {
 function longestIncomingWalk(graph, start, maxDepth) {
   let best = { path: [start], edges: [] };
   const visited = /* @__PURE__ */ new Set([start]);
-  function step(node, path40, edges) {
-    if (path40.length > best.path.length) {
-      best = { path: [...path40], edges: [...edges] };
+  function step(node, path41, edges) {
+    if (path41.length > best.path.length) {
+      best = { path: [...path41], edges: [...edges] };
     }
-    if (path40.length - 1 >= maxDepth) return;
+    if (path41.length - 1 >= maxDepth) return;
     const incoming = bestEdgeBySource(graph, graph.inboundEdges(node));
     for (const [srcId, edge] of incoming) {
       if (visited.has(srcId)) continue;
       visited.add(srcId);
-      path40.push(srcId);
+      path41.push(srcId);
       edges.push(edge);
-      step(srcId, path40, edges);
-      path40.pop();
+      step(srcId, path41, edges);
+      path41.pop();
       edges.pop();
       visited.delete(srcId);
     }
@@ -1588,35 +1588,37 @@ function upsertObservedEdge(graph, type, source, target, ts, isError = false) {
     const existing = graph.getEdgeAttributes(id);
     const newSpanCount = (existing.signal?.spanCount ?? existing.callCount ?? 0) + 1;
     const newErrorCount = (existing.signal?.errorCount ?? 0) + (isError ? 1 : 0);
+    const newSignal = {
+      spanCount: newSpanCount,
+      errorCount: newErrorCount,
+      lastObservedAgeMs: 0
+    };
     const updated = {
       ...existing,
       provenance: import_types3.Provenance.OBSERVED,
       lastObserved: ts,
       callCount: newSpanCount,
-      signal: {
-        spanCount: newSpanCount,
-        errorCount: newErrorCount,
-        lastObservedAgeMs: 0
-      },
-      confidence: 1
+      signal: newSignal,
+      confidence: (0, import_types3.confidenceForObservedSignal)(newSignal)
     };
     graph.replaceEdgeAttributes(id, updated);
     return { edge: updated, created: false };
   }
+  const signal = {
+    spanCount: 1,
+    errorCount: isError ? 1 : 0,
+    lastObservedAgeMs: 0
+  };
   const edge = {
     id,
     source,
     target,
     type,
     provenance: import_types3.Provenance.OBSERVED,
-    confidence: 1,
+    confidence: (0, import_types3.confidenceForObservedSignal)(signal),
     lastObserved: ts,
     callCount: 1,
-    signal: {
-      spanCount: 1,
-      errorCount: isError ? 1 : 0,
-      lastObservedAgeMs: 0
-    }
+    signal
   };
   graph.addEdgeWithKey(id, source, target, edge);
   return { edge, created: true };
@@ -2251,6 +2253,27 @@ function formatExtractionBanner(count) {
   if (count === 1) return `[neat] 1 file skipped due to parse errors`;
   return `[neat] ${count} files skipped due to parse errors`;
 }
+var droppedSink = [];
+function noteExtractedDropped(edge) {
+  droppedSink.push(edge);
+}
+function drainDroppedExtracted() {
+  return droppedSink.splice(0, droppedSink.length);
+}
+function isRejectedLogEnabled() {
+  const raw = process.env.NEAT_EXTRACTED_REJECTED_LOG;
+  return raw === "1" || raw === "true";
+}
+async function writeRejectedExtracted(drops, rejectedPath) {
+  if (drops.length === 0) return;
+  await import_node_fs7.promises.mkdir(import_node_path7.default.dirname(rejectedPath), { recursive: true });
+  const lines = drops.map((d) => JSON.stringify({ ...d, ts: (/* @__PURE__ */ new Date()).toISOString() })).join("\n") + "\n";
+  await import_node_fs7.promises.appendFile(rejectedPath, lines, "utf8");
+}
+function formatPrecisionFloorBanner(count) {
+  if (count === 1) return `[neat] 1 extracted edge dropped below precision floor`;
+  return `[neat] ${count} extracted edges dropped below precision floor`;
+}
 
 // src/extract/services.ts
 var DEFAULT_SCAN_DEPTH = 5;
@@ -3189,6 +3212,7 @@ async function addDatabasesAndCompat(graph, services, scanPath) {
         target: dbNode.id,
         type: import_types7.EdgeType.CONNECTS_TO,
         provenance: import_types7.Provenance.EXTRACTED,
+        confidence: (0, import_types7.confidenceForExtracted)("structural"),
         // ADR-032 / #140 — every EXTRACTED edge carries evidence.file.
         // Ghost-edge cleanup keys retirement on this; the conditional
         // sourceFile spread that used to live here was a v0.1.x leftover.
@@ -3263,6 +3287,7 @@ async function addConfigNodes(graph, services, scanPath) {
         target: node.id,
         type: import_types8.EdgeType.CONFIGURED_BY,
         provenance: import_types8.Provenance.EXTRACTED,
+        confidence: (0, import_types8.confidenceForExtracted)("structural"),
         evidence: { file: relPath.split(import_node_path18.default.sep).join("/") }
       };
       if (!graph.hasEdge(edge.id)) {
@@ -3417,17 +3442,32 @@ async function addHttpCallEdges(graph, services) {
     for (const [targetId, evidenceFile] of seenTargets) {
       const fileContent = files.find((f) => f.path === evidenceFile.file)?.content ?? "";
       const line = lineOf(fileContent, `//${evidenceFile.host}`);
+      const confidence = (0, import_types9.confidenceForExtracted)("hostname-shape-match");
+      const ev = {
+        file: import_node_path20.default.relative(service.dir, evidenceFile.file),
+        line,
+        snippet: snippet(fileContent, line)
+      };
+      const edgeId = (0, import_types4.extractedEdgeId)(service.node.id, targetId, import_types9.EdgeType.CALLS);
+      if (!(0, import_types9.passesExtractedFloor)(confidence)) {
+        noteExtractedDropped({
+          source: service.node.id,
+          target: targetId,
+          type: import_types9.EdgeType.CALLS,
+          confidence,
+          confidenceKind: "hostname-shape-match",
+          evidence: ev
+        });
+        continue;
+      }
       const edge = {
-        id: (0, import_types4.extractedEdgeId)(service.node.id, targetId, import_types9.EdgeType.CALLS),
+        id: edgeId,
         source: service.node.id,
         target: targetId,
         type: import_types9.EdgeType.CALLS,
         provenance: import_types9.Provenance.EXTRACTED,
-        evidence: {
-          file: import_node_path20.default.relative(service.dir, evidenceFile.file),
-          line,
-          snippet: snippet(fileContent, line)
-        }
+        confidence,
+        evidence: ev
       };
       if (!graph.hasEdge(edge.id)) {
         graph.addEdgeWithKey(edge.id, edge.source, edge.target, edge);
@@ -3466,6 +3506,10 @@ function kafkaEndpointsFromFile(file, serviceDir) {
       name: topic,
       kind: "kafka-topic",
       edgeType,
+      // `producer.send({topic: 'x'})` / `consumer.subscribe({topic: 'x'})` —
+      // framework-aware (kafkajs / node-rdkafka shape). Verified-call-site
+      // tier (ADR-066).
+      confidenceKind: "verified-call-site",
       evidence: {
         file: import_node_path21.default.relative(serviceDir, file.path),
         line,
@@ -3498,6 +3542,10 @@ function redisEndpointsFromFile(file, serviceDir) {
       name: host,
       kind: "redis",
       edgeType: "CALLS",
+      // `redis://host` URL literal — the scheme is structural support, but no
+      // call expression is verified to wire it through. URL-with-structural-
+      // support tier (ADR-066).
+      confidenceKind: "url-with-structural-support",
       evidence: {
         file: import_node_path22.default.relative(serviceDir, file.path),
         line,
@@ -3539,6 +3587,10 @@ function awsEndpointsFromFile(file, serviceDir) {
       name,
       kind,
       edgeType: "CALLS",
+      // SDK marker (S3Client, GetCommand, etc.) plus a Bucket/TableName
+      // literal — framework-aware recognizer, verified-call-site tier
+      // (ADR-066).
+      confidenceKind: "verified-call-site",
       evidence: {
         file: import_node_path23.default.relative(serviceDir, file.path),
         line,
@@ -3618,6 +3670,10 @@ function grpcEndpointsFromFile(file, serviceDir) {
       name,
       kind,
       edgeType: "CALLS",
+      // `new <Name>Client(...)` with @aws-sdk/* or @grpc/grpc-js import
+      // context — import-aware classification per #238. Verified-call-site
+      // tier (ADR-066).
+      confidenceKind: "verified-call-site",
       evidence: {
         file: import_node_path24.default.relative(serviceDir, file.path),
         line,
@@ -3678,6 +3734,18 @@ async function addExternalEndpointEdges(graph, services) {
       const edgeId = (0, import_types4.extractedEdgeId)(service.node.id, ep.infraId, edgeType);
       if (seenEdges.has(edgeId)) continue;
       seenEdges.add(edgeId);
+      const confidence = (0, import_types14.confidenceForExtracted)(ep.confidenceKind);
+      if (!(0, import_types14.passesExtractedFloor)(confidence)) {
+        noteExtractedDropped({
+          source: service.node.id,
+          target: ep.infraId,
+          type: edgeType,
+          confidence,
+          confidenceKind: ep.confidenceKind,
+          evidence: ep.evidence
+        });
+        continue;
+      }
       if (!graph.hasEdge(edgeId)) {
         const edge = {
           id: edgeId,
@@ -3685,6 +3753,7 @@ async function addExternalEndpointEdges(graph, services) {
           target: ep.infraId,
           type: edgeType,
           provenance: import_types14.Provenance.EXTRACTED,
+          confidence,
           evidence: ep.evidence
         };
         graph.addEdgeWithKey(edgeId, edge.source, edge.target, edge);
@@ -3804,6 +3873,7 @@ async function addComposeInfra(graph, scanPath, services) {
         target: targetId,
         type: import_types16.EdgeType.DEPENDS_ON,
         provenance: import_types16.Provenance.EXTRACTED,
+        confidence: (0, import_types16.confidenceForExtracted)("structural"),
         evidence: { file: evidenceFile }
       };
       graph.addEdgeWithKey(edgeId, edge.source, edge.target, edge);
@@ -3864,6 +3934,7 @@ async function addDockerfileRuntimes(graph, services, scanPath) {
         target: node.id,
         type: import_types17.EdgeType.RUNS_ON,
         provenance: import_types17.Provenance.EXTRACTED,
+        confidence: (0, import_types17.confidenceForExtracted)("structural"),
         evidence: {
           file: import_node_path26.default.relative(scanPath, dockerfilePath).split(import_node_path26.default.sep).join("/")
         }
@@ -3980,6 +4051,9 @@ async function addInfra(graph, scanPath, services) {
   };
 }
 
+// src/extract/index.ts
+var import_node_path30 = __toESM(require("path"), 1);
+
 // src/extract/retire.ts
 init_cjs_shims();
 var import_node_fs17 = require("fs");
@@ -4044,13 +4118,26 @@ async function extractFromDirectory(graph, scanPath, opts = {}) {
       );
     }
   }
+  const droppedEntries = drainDroppedExtracted();
+  if (isRejectedLogEnabled() && opts.errorsPath && droppedEntries.length > 0) {
+    const rejectedPath = import_node_path30.default.join(import_node_path30.default.dirname(opts.errorsPath), "rejected.ndjson");
+    try {
+      await writeRejectedExtracted(droppedEntries, rejectedPath);
+    } catch (err) {
+      console.warn(
+        `[neat] failed to write rejected extracted edges to ${rejectedPath}: ${err.message}`
+      );
+    }
+  }
   const result = {
     nodesAdded: phase1Nodes + phase2.nodesAdded + phase3.nodesAdded + phase4.nodesAdded + phase5.nodesAdded,
     edgesAdded: phase2.edgesAdded + phase3.edgesAdded + phase4.edgesAdded + phase5.edgesAdded,
     frontiersPromoted,
     extractionErrors: errorEntries.length,
     errorEntries,
-    ghostsRetired
+    ghostsRetired,
+    extractedDropped: droppedEntries.length,
+    droppedEntries
   };
   emitNeatEvent({
     type: "extraction-complete",
@@ -4068,7 +4155,7 @@ async function extractFromDirectory(graph, scanPath, opts = {}) {
 // src/persist.ts
 init_cjs_shims();
 var import_node_fs18 = require("fs");
-var import_node_path30 = __toESM(require("path"), 1);
+var import_node_path31 = __toESM(require("path"), 1);
 var SCHEMA_VERSION = 2;
 function migrateV1ToV2(payload) {
   const nodes = payload.graph.nodes;
@@ -4082,7 +4169,7 @@ function migrateV1ToV2(payload) {
   return { ...payload, schemaVersion: 2 };
 }
 async function ensureDir(filePath) {
-  await import_node_fs18.promises.mkdir(import_node_path30.default.dirname(filePath), { recursive: true });
+  await import_node_fs18.promises.mkdir(import_node_path31.default.dirname(filePath), { recursive: true });
 }
 async function saveGraphToDisk(graph, outPath) {
   await ensureDir(outPath);
@@ -4152,7 +4239,7 @@ function startPersistLoop(graph, outPath, intervalMs = 6e4) {
 // src/watch.ts
 init_cjs_shims();
 var import_node_fs22 = __toESM(require("fs"), 1);
-var import_node_path36 = __toESM(require("path"), 1);
+var import_node_path37 = __toESM(require("path"), 1);
 var import_chokidar = __toESM(require("chokidar"), 1);
 
 // src/api.ts
@@ -4200,14 +4287,6 @@ function nodeIsFrontier(graph, nodeId) {
   const attrs = graph.getNodeAttributes(nodeId);
   return attrs.type === import_types19.NodeType.FrontierNode;
 }
-function hasAnyObservedFromSource(graph, sourceId) {
-  if (!graph.hasNode(sourceId)) return false;
-  for (const edgeId of graph.outboundEdges(sourceId)) {
-    const e = graph.getEdgeAttributes(edgeId);
-    if (e.provenance === import_types19.Provenance.OBSERVED) return true;
-  }
-  return false;
-}
 function clampConfidence(n) {
   if (!Number.isFinite(n)) return 0;
   return Math.max(0, Math.min(1, n));
@@ -4221,32 +4300,34 @@ function reasonForMissingExtracted(source, target, type) {
 var RECOMMENDATION_MISSING_OBSERVED = "Verify the code path is exercised in production; check feature flags or conditional branches that might gate the call.";
 var RECOMMENDATION_MISSING_EXTRACTED = "Likely dynamic dispatch, reflection, or a coverage gap in tree-sitter extraction. Consider an `aliases` entry on the source service or file an extractor issue.";
 var RECOMMENDATION_HOST_MISMATCH = "Check environment-specific config overrides \u2014 the runtime host differs from what static configuration declares.";
+function gradedConfidence(edge) {
+  if (typeof edge.confidence === "number") return clampConfidence(edge.confidence);
+  return clampConfidence(confidenceForEdge(edge));
+}
 function detectMissingDivergences(graph, bucket) {
   const out = [];
   if (bucket.extracted && !bucket.observed) {
     if (!nodeIsFrontier(graph, bucket.target)) {
-      const sourceHasTraffic = hasAnyObservedFromSource(graph, bucket.source);
       out.push({
         type: "missing-observed",
         source: bucket.source,
         target: bucket.target,
         edgeType: bucket.type,
         extracted: bucket.extracted,
-        confidence: sourceHasTraffic ? 1 : 0.5,
+        confidence: gradedConfidence(bucket.extracted),
         reason: reasonForMissingObserved(bucket.source, bucket.target, bucket.type),
         recommendation: RECOMMENDATION_MISSING_OBSERVED
       });
     }
   }
   if (bucket.observed && !bucket.extracted) {
-    const cascaded = clampConfidence(confidenceForEdge(bucket.observed));
     out.push({
       type: "missing-extracted",
       source: bucket.source,
       target: bucket.target,
       edgeType: bucket.type,
       observed: bucket.observed,
-      confidence: cascaded,
+      confidence: gradedConfidence(bucket.observed),
       reason: reasonForMissingExtracted(bucket.source, bucket.target, bucket.type),
       recommendation: RECOMMENDATION_MISSING_EXTRACTED
     });
@@ -4385,8 +4466,17 @@ function computeDivergences(graph, opts = {}) {
     const target = opts.node;
     filtered = filtered.filter((d) => involvesNode(d, target));
   }
+  const TYPE_LEADERSHIP = {
+    "missing-extracted": 0,
+    "missing-observed": 1,
+    "version-mismatch": 2,
+    "host-mismatch": 3,
+    "compat-violation": 4
+  };
   filtered.sort((a, b) => {
     if (b.confidence !== a.confidence) return b.confidence - a.confidence;
+    const lead = TYPE_LEADERSHIP[a.type] - TYPE_LEADERSHIP[b.type];
+    if (lead !== 0) return lead;
     if (a.type !== b.type) return a.type.localeCompare(b.type);
     if (a.source !== b.source) return a.source.localeCompare(b.source);
     return a.target.localeCompare(b.target);
@@ -4477,23 +4567,23 @@ function canonicalJson(value) {
 
 // src/projects.ts
 init_cjs_shims();
-var import_node_path31 = __toESM(require("path"), 1);
+var import_node_path32 = __toESM(require("path"), 1);
 function pathsForProject(project, baseDir) {
   if (project === DEFAULT_PROJECT) {
     return {
-      snapshotPath: import_node_path31.default.join(baseDir, "graph.json"),
-      errorsPath: import_node_path31.default.join(baseDir, "errors.ndjson"),
-      staleEventsPath: import_node_path31.default.join(baseDir, "stale-events.ndjson"),
-      embeddingsCachePath: import_node_path31.default.join(baseDir, "embeddings.json"),
-      policyViolationsPath: import_node_path31.default.join(baseDir, "policy-violations.ndjson")
+      snapshotPath: import_node_path32.default.join(baseDir, "graph.json"),
+      errorsPath: import_node_path32.default.join(baseDir, "errors.ndjson"),
+      staleEventsPath: import_node_path32.default.join(baseDir, "stale-events.ndjson"),
+      embeddingsCachePath: import_node_path32.default.join(baseDir, "embeddings.json"),
+      policyViolationsPath: import_node_path32.default.join(baseDir, "policy-violations.ndjson")
     };
   }
   return {
-    snapshotPath: import_node_path31.default.join(baseDir, `${project}.json`),
-    errorsPath: import_node_path31.default.join(baseDir, `errors.${project}.ndjson`),
-    staleEventsPath: import_node_path31.default.join(baseDir, `stale-events.${project}.ndjson`),
-    embeddingsCachePath: import_node_path31.default.join(baseDir, `embeddings.${project}.json`),
-    policyViolationsPath: import_node_path31.default.join(baseDir, `policy-violations.${project}.ndjson`)
+    snapshotPath: import_node_path32.default.join(baseDir, `${project}.json`),
+    errorsPath: import_node_path32.default.join(baseDir, `errors.${project}.ndjson`),
+    staleEventsPath: import_node_path32.default.join(baseDir, `stale-events.${project}.ndjson`),
+    embeddingsCachePath: import_node_path32.default.join(baseDir, `embeddings.${project}.json`),
+    policyViolationsPath: import_node_path32.default.join(baseDir, `policy-violations.${project}.ndjson`)
   };
 }
 var Projects = class {
@@ -4531,23 +4621,23 @@ var Projects = class {
 init_cjs_shims();
 var import_node_fs20 = require("fs");
 var import_node_os2 = __toESM(require("os"), 1);
-var import_node_path32 = __toESM(require("path"), 1);
+var import_node_path33 = __toESM(require("path"), 1);
 var import_types20 = require("@neat.is/types");
 var LOCK_TIMEOUT_MS = 5e3;
 var LOCK_RETRY_MS = 50;
 function neatHome() {
   const override = process.env.NEAT_HOME;
-  if (override && override.length > 0) return import_node_path32.default.resolve(override);
-  return import_node_path32.default.join(import_node_os2.default.homedir(), ".neat");
+  if (override && override.length > 0) return import_node_path33.default.resolve(override);
+  return import_node_path33.default.join(import_node_os2.default.homedir(), ".neat");
 }
 function registryPath() {
-  return import_node_path32.default.join(neatHome(), "projects.json");
+  return import_node_path33.default.join(neatHome(), "projects.json");
 }
 function registryLockPath() {
-  return import_node_path32.default.join(neatHome(), "projects.json.lock");
+  return import_node_path33.default.join(neatHome(), "projects.json.lock");
 }
 async function normalizeProjectPath(input) {
-  const resolved = import_node_path32.default.resolve(input);
+  const resolved = import_node_path33.default.resolve(input);
   try {
     return await import_node_fs20.promises.realpath(resolved);
   } catch {
@@ -4555,7 +4645,7 @@ async function normalizeProjectPath(input) {
   }
 }
 async function writeAtomically(target, contents) {
-  await import_node_fs20.promises.mkdir(import_node_path32.default.dirname(target), { recursive: true });
+  await import_node_fs20.promises.mkdir(import_node_path33.default.dirname(target), { recursive: true });
   const tmp = `${target}.${process.pid}.${Date.now()}.${Math.random().toString(36).slice(2, 8)}.tmp`;
   const fd = await import_node_fs20.promises.open(tmp, "w");
   try {
@@ -4568,7 +4658,7 @@ async function writeAtomically(target, contents) {
 }
 async function acquireLock(lockPath, timeoutMs = LOCK_TIMEOUT_MS) {
   const deadline = Date.now() + timeoutMs;
-  await import_node_fs20.promises.mkdir(import_node_path32.default.dirname(lockPath), { recursive: true });
+  await import_node_fs20.promises.mkdir(import_node_path33.default.dirname(lockPath), { recursive: true });
   while (true) {
     try {
       const fd = await import_node_fs20.promises.open(lockPath, "wx");
@@ -5175,7 +5265,7 @@ init_otel_grpc();
 // src/search.ts
 init_cjs_shims();
 var import_node_fs21 = require("fs");
-var import_node_path35 = __toESM(require("path"), 1);
+var import_node_path36 = __toESM(require("path"), 1);
 var import_node_crypto = require("crypto");
 var DEFAULT_LIMIT = 10;
 var NOMIC_DIM = 768;
@@ -5314,7 +5404,7 @@ async function readCache(cachePath) {
   }
 }
 async function writeCache(cachePath, cache) {
-  await import_node_fs21.promises.mkdir(import_node_path35.default.dirname(cachePath), { recursive: true });
+  await import_node_fs21.promises.mkdir(import_node_path36.default.dirname(cachePath), { recursive: true });
   await import_node_fs21.promises.writeFile(cachePath, JSON.stringify(cache));
 }
 var VectorIndex = class {
@@ -5470,8 +5560,8 @@ var ALL_PHASES = [
 ];
 function classifyChange(relPath) {
   const phases = /* @__PURE__ */ new Set();
-  const base = import_node_path36.default.basename(relPath).toLowerCase();
-  const segments = relPath.split(import_node_path36.default.sep).map((s) => s.toLowerCase());
+  const base = import_node_path37.default.basename(relPath).toLowerCase();
+  const segments = relPath.split(import_node_path37.default.sep).map((s) => s.toLowerCase());
   if (base === "package.json" || base === "requirements.txt" || base === "pyproject.toml" || base === "setup.py") {
     phases.add("services");
     phases.add("aliases");
@@ -5573,9 +5663,9 @@ function countWatchableDirs(scanPath, limit) {
     for (const e of entries) {
       if (count >= limit) return;
       if (!e.isDirectory()) continue;
-      if (IGNORED_WATCH_PATHS.some((re) => re.test(import_node_path36.default.join(dir, e.name) + import_node_path36.default.sep))) continue;
+      if (IGNORED_WATCH_PATHS.some((re) => re.test(import_node_path37.default.join(dir, e.name) + import_node_path37.default.sep))) continue;
       count++;
-      if (depth < 2) visit(import_node_path36.default.join(dir, e.name), depth + 1);
+      if (depth < 2) visit(import_node_path37.default.join(dir, e.name), depth + 1);
     }
   };
   visit(scanPath, 0);
@@ -5593,8 +5683,8 @@ async function startWatch(graph, opts) {
   const projectName = opts.project ?? DEFAULT_PROJECT;
   await loadGraphFromDisk(graph, opts.outPath);
   const detachEventBus = attachGraphToEventBus(graph, { project: projectName });
-  const policyFilePath = import_node_path36.default.join(opts.scanPath, "policy.json");
-  const policyViolationsPath = import_node_path36.default.join(import_node_path36.default.dirname(opts.outPath), "policy-violations.ndjson");
+  const policyFilePath = import_node_path37.default.join(opts.scanPath, "policy.json");
+  const policyViolationsPath = import_node_path37.default.join(import_node_path37.default.dirname(opts.outPath), "policy-violations.ndjson");
   let policies = [];
   try {
     policies = await loadPolicyFile(policyFilePath);
@@ -5643,7 +5733,7 @@ async function startWatch(graph, opts) {
   const host = opts.host ?? "0.0.0.0";
   const port = opts.port ?? 8080;
   const otelPort = opts.otelPort ?? 4318;
-  const cachePath = opts.embeddingsCachePath ?? import_node_path36.default.join(import_node_path36.default.dirname(opts.outPath), "embeddings.json");
+  const cachePath = opts.embeddingsCachePath ?? import_node_path37.default.join(import_node_path37.default.dirname(opts.outPath), "embeddings.json");
   let searchIndex;
   try {
     searchIndex = await buildSearchIndex(graph, { cachePath });
@@ -5661,7 +5751,7 @@ async function startWatch(graph, opts) {
       // Paths are derived from the explicit options the watch caller passes
       // — pathsForProject is only used to fill in the embeddings/snapshot
       // fields so the registry shape is complete.
-      ...pathsForProject(projectName, import_node_path36.default.dirname(opts.outPath)),
+      ...pathsForProject(projectName, import_node_path37.default.dirname(opts.outPath)),
       snapshotPath: opts.outPath,
       errorsPath: opts.errorsPath,
       staleEventsPath: opts.staleEventsPath
@@ -5746,9 +5836,9 @@ async function startWatch(graph, opts) {
   };
   const onPath = (absPath) => {
     if (shouldIgnore(absPath)) return;
-    const rel = import_node_path36.default.relative(opts.scanPath, absPath);
+    const rel = import_node_path37.default.relative(opts.scanPath, absPath);
     if (!rel || rel.startsWith("..")) return;
-    pendingPaths.add(rel.split(import_node_path36.default.sep).join("/"));
+    pendingPaths.add(rel.split(import_node_path37.default.sep).join("/"));
     const phases = classifyChange(rel);
     if (phases.size === 0) {
       for (const p of ALL_PHASES) pending.add(p);
@@ -5806,7 +5896,7 @@ init_cjs_shims();
 // src/installers/javascript.ts
 init_cjs_shims();
 var import_node_fs23 = require("fs");
-var import_node_path37 = __toESM(require("path"), 1);
+var import_node_path38 = __toESM(require("path"), 1);
 var SDK_PACKAGES = [
   { name: "@opentelemetry/api", version: "^1.9.0" },
   { name: "@opentelemetry/sdk-node", version: "^0.57.0" },
@@ -5822,7 +5912,7 @@ var OTEL_ENV = {
 };
 async function readPackageJson(serviceDir) {
   try {
-    const raw = await import_node_fs23.promises.readFile(import_node_path37.default.join(serviceDir, "package.json"), "utf8");
+    const raw = await import_node_fs23.promises.readFile(import_node_path38.default.join(serviceDir, "package.json"), "utf8");
     return JSON.parse(raw);
   } catch {
     return null;
@@ -5841,7 +5931,7 @@ function rewriteStartScript(start) {
 }
 async function plan(serviceDir) {
   const pkg = await readPackageJson(serviceDir);
-  const manifestPath = import_node_path37.default.join(serviceDir, "package.json");
+  const manifestPath = import_node_path38.default.join(serviceDir, "package.json");
   const empty = {
     language: "javascript",
     serviceDir,
@@ -5940,7 +6030,7 @@ async function rollback(installPlan, originals) {
     ...restored.map((f) => `restored: ${f}`),
     ""
   ];
-  const rollbackPath = import_node_path37.default.join(installPlan.serviceDir, "neat-rollback.patch");
+  const rollbackPath = import_node_path38.default.join(installPlan.serviceDir, "neat-rollback.patch");
   await import_node_fs23.promises.writeFile(rollbackPath, lines.join("\n"), "utf8");
 }
 var javascriptInstaller = {
@@ -5953,7 +6043,7 @@ var javascriptInstaller = {
 // src/installers/python.ts
 init_cjs_shims();
 var import_node_fs24 = require("fs");
-var import_node_path38 = __toESM(require("path"), 1);
+var import_node_path39 = __toESM(require("path"), 1);
 var SDK_PACKAGES2 = [
   { name: "opentelemetry-distro", version: ">=0.49b0" },
   { name: "opentelemetry-exporter-otlp", version: ">=1.28.0" }
@@ -5974,7 +6064,7 @@ async function exists2(p) {
 async function detect2(serviceDir) {
   const markers = ["requirements.txt", "pyproject.toml", "setup.py"];
   for (const m of markers) {
-    if (await exists2(import_node_path38.default.join(serviceDir, m))) return true;
+    if (await exists2(import_node_path39.default.join(serviceDir, m))) return true;
   }
   return false;
 }
@@ -5984,7 +6074,7 @@ function reqPackageName(line) {
   return head.replace(/[<>=!~].*$/, "").toLowerCase();
 }
 async function planRequirementsTxtEdits(serviceDir) {
-  const file = import_node_path38.default.join(serviceDir, "requirements.txt");
+  const file = import_node_path39.default.join(serviceDir, "requirements.txt");
   if (!await exists2(file)) return null;
   const raw = await import_node_fs24.promises.readFile(file, "utf8");
   const presentNames = new Set(
@@ -5994,7 +6084,7 @@ async function planRequirementsTxtEdits(serviceDir) {
   return { manifest: file, missing: [...missing] };
 }
 async function planProcfileEdits(serviceDir) {
-  const procfile = import_node_path38.default.join(serviceDir, "Procfile");
+  const procfile = import_node_path39.default.join(serviceDir, "Procfile");
   if (!await exists2(procfile)) return [];
   const raw = await import_node_fs24.promises.readFile(procfile, "utf8");
   const edits = [];
@@ -6079,7 +6169,7 @@ async function apply2(installPlan) {
       if (raw === void 0) {
         throw new Error(`python installer: cannot read ${file} during apply`);
       }
-      const base = import_node_path38.default.basename(file);
+      const base = import_node_path39.default.basename(file);
       if (base === "requirements.txt") {
         const edits = installPlan.dependencyEdits.filter((e) => e.file === file);
         if (edits.length > 0) await applyRequirementsTxt(file, edits, raw);
@@ -6111,7 +6201,7 @@ async function rollback2(installPlan, originals) {
     ...restored.map((f) => `restored: ${f}`),
     ""
   ];
-  const rollbackPath = import_node_path38.default.join(installPlan.serviceDir, "neat-rollback.patch");
+  const rollbackPath = import_node_path39.default.join(installPlan.serviceDir, "neat-rollback.patch");
   await import_node_fs24.promises.writeFile(rollbackPath, lines.join("\n"), "utf8");
 }
 var pythonInstaller = {
@@ -6225,10 +6315,10 @@ var TransportError = class extends Error {
 function createHttpClient(baseUrl) {
   const root = baseUrl.replace(/\/$/, "");
   return {
-    async get(path40) {
+    async get(path41) {
       let res;
       try {
-        res = await fetch(`${root}${path40}`);
+        res = await fetch(`${root}${path41}`);
       } catch (err) {
         throw new TransportError(
           `cannot reach neat-core at ${root}: ${err.message}`
@@ -6238,16 +6328,16 @@ function createHttpClient(baseUrl) {
         const body = await res.text().catch(() => "");
         throw new HttpError(
           res.status,
-          `${res.status} ${res.statusText} on GET ${path40}: ${body}`,
+          `${res.status} ${res.statusText} on GET ${path41}: ${body}`,
           body
         );
       }
       return await res.json();
     },
-    async post(path40, body) {
+    async post(path41, body) {
       let res;
       try {
-        res = await fetch(`${root}${path40}`, {
+        res = await fetch(`${root}${path41}`, {
           method: "POST",
           headers: { "content-type": "application/json" },
           body: JSON.stringify(body)
@@ -6261,7 +6351,7 @@ function createHttpClient(baseUrl) {
         const text = await res.text().catch(() => "");
         throw new HttpError(
           res.status,
-          `${res.status} ${res.statusText} on POST ${path40}: ${text}`,
+          `${res.status} ${res.statusText} on POST ${path41}: ${text}`,
           text
         );
       }
@@ -6275,12 +6365,12 @@ function projectPath(project, suffix) {
 }
 async function runRootCause(client, input) {
   const qs = input.errorId ? `?errorId=${encodeURIComponent(input.errorId)}` : "";
-  const path40 = projectPath(
+  const path41 = projectPath(
     input.project,
     `/graph/root-cause/${encodeURIComponent(input.errorNode)}${qs}`
   );
   try {
-    const result = await client.get(path40);
+    const result = await client.get(path41);
     const arrowPath = result.traversalPath.join(" \u2190 ");
     const provenances = result.edgeProvenances.length ? result.edgeProvenances.join(", ") : "(direct, no edges traversed)";
     const summary = `Root cause for ${input.errorNode} is ${result.rootCauseNode}. ` + result.rootCauseReason + (result.fixRecommendation ? ` Recommended fix: ${result.fixRecommendation}.` : "");
@@ -6306,12 +6396,12 @@ async function runRootCause(client, input) {
 }
 async function runBlastRadius(client, input) {
   const qs = input.depth !== void 0 ? `?depth=${input.depth}` : "";
-  const path40 = projectPath(
+  const path41 = projectPath(
     input.project,
     `/graph/blast-radius/${encodeURIComponent(input.nodeId)}${qs}`
   );
   try {
-    const result = await client.get(path40);
+    const result = await client.get(path41);
     if (result.totalAffected === 0) {
       return {
         summary: `${result.origin} has no downstream dependencies. Nothing else would break if it failed.`
@@ -6345,12 +6435,12 @@ function formatBlastEntry(n) {
 }
 async function runDependencies(client, input) {
   const depth = input.depth ?? 3;
-  const path40 = projectPath(
+  const path41 = projectPath(
     input.project,
     `/graph/dependencies/${encodeURIComponent(input.nodeId)}?depth=${depth}`
   );
   try {
-    const result = await client.get(path40);
+    const result = await client.get(path41);
     if (result.total === 0) {
       return {
         summary: depth === 1 ? `${input.nodeId} has no direct dependencies in the graph.` : `${input.nodeId} has no dependencies (BFS to depth ${depth}).`
@@ -6431,9 +6521,9 @@ function formatDuration(ms) {
   return `${Math.round(h / 24)}d`;
 }
 async function runIncidents(client, input) {
-  const path40 = input.nodeId ? projectPath(input.project, `/incidents/${encodeURIComponent(input.nodeId)}`) : projectPath(input.project, "/incidents");
+  const path41 = input.nodeId ? projectPath(input.project, `/incidents/${encodeURIComponent(input.nodeId)}`) : projectPath(input.project, "/incidents");
   try {
-    const body = await client.get(path40);
+    const body = await client.get(path41);
     const events = body.events;
     if (events.length === 0) {
       return {
@@ -6957,7 +7047,7 @@ async function runInit(opts) {
   printDiscoveryReport(opts, services);
   const sections = opts.noInstall ? [] : await buildPatchSections(services);
   const patch = renderPatch(sections);
-  const patchPath = import_node_path39.default.join(opts.scanPath, "neat.patch");
+  const patchPath = import_node_path40.default.join(opts.scanPath, "neat.patch");
   if (opts.dryRun) {
     await import_node_fs25.promises.writeFile(patchPath, patch, "utf8");
     written.push(patchPath);
@@ -6970,9 +7060,9 @@ async function runInit(opts) {
   const graph = getGraph(graphKey);
   const projectPaths = pathsForProject(
     graphKey,
-    import_node_path39.default.join(opts.scanPath, "neat-out")
+    import_node_path40.default.join(opts.scanPath, "neat-out")
   );
-  const errorsPath = import_node_path39.default.join(import_node_path39.default.dirname(opts.outPath), import_node_path39.default.basename(projectPaths.errorsPath));
+  const errorsPath = import_node_path40.default.join(import_node_path40.default.dirname(opts.outPath), import_node_path40.default.basename(projectPaths.errorsPath));
   const result = await extractFromDirectory(graph, opts.scanPath, { errorsPath });
   await saveGraphToDisk(graph, opts.outPath);
   written.push(opts.outPath);
@@ -7022,6 +7112,7 @@ async function runInit(opts) {
   if (result.extractionErrors > 0) {
     console.log(`errors:   ${errorsPath}`);
   }
+  console.log(formatPrecisionFloorBanner(result.extractedDropped));
   const incompatibilities = findIncompatibilities(nodes);
   if (incompatibilities.length > 0) {
     console.log("");
@@ -7051,9 +7142,9 @@ var CLAUDE_SKILL_CONFIG = {
 };
 function claudeConfigPath() {
   const override = process.env.NEAT_CLAUDE_CONFIG;
-  if (override && override.length > 0) return import_node_path39.default.resolve(override);
+  if (override && override.length > 0) return import_node_path40.default.resolve(override);
   const home = process.env.HOME ?? process.env.USERPROFILE ?? "";
-  return import_node_path39.default.join(home, ".claude.json");
+  return import_node_path40.default.join(home, ".claude.json");
 }
 async function runSkill(opts) {
   const snippet2 = JSON.stringify(CLAUDE_SKILL_CONFIG, null, 2) + "\n";
@@ -7077,7 +7168,7 @@ async function runSkill(opts) {
       ...existing,
       mcpServers: { ...mcp, neat: CLAUDE_SKILL_CONFIG.mcpServers.neat }
     };
-    await import_node_fs25.promises.mkdir(import_node_path39.default.dirname(target), { recursive: true });
+    await import_node_fs25.promises.mkdir(import_node_path40.default.dirname(target), { recursive: true });
     await import_node_fs25.promises.writeFile(target, JSON.stringify(merged, null, 2) + "\n", "utf8");
     console.log(`neat skill: wrote mcpServers.neat to ${target}`);
     console.log("restart Claude Code to pick up the new MCP server.");
@@ -7112,12 +7203,12 @@ async function main() {
       console.error("neat init: --apply and --dry-run are mutually exclusive");
       process.exit(2);
     }
-    const scanPath = import_node_path39.default.resolve(target);
+    const scanPath = import_node_path40.default.resolve(target);
     const projectExplicit = parsed.project !== null;
-    const projectName = projectExplicit ? project : import_node_path39.default.basename(scanPath);
+    const projectName = projectExplicit ? project : import_node_path40.default.basename(scanPath);
     const projectKey = projectExplicit ? project : DEFAULT_PROJECT;
-    const fallback = pathsForProject(projectKey, import_node_path39.default.join(scanPath, "neat-out")).snapshotPath;
-    const outPath = import_node_path39.default.resolve(process.env.NEAT_OUT_PATH ?? fallback);
+    const fallback = pathsForProject(projectKey, import_node_path40.default.join(scanPath, "neat-out")).snapshotPath;
+    const outPath = import_node_path40.default.resolve(process.env.NEAT_OUT_PATH ?? fallback);
     const result = await runInit({
       scanPath,
       outPath,
@@ -7137,21 +7228,21 @@ async function main() {
       usage();
       process.exit(2);
     }
-    const scanPath = import_node_path39.default.resolve(target);
+    const scanPath = import_node_path40.default.resolve(target);
     const stat = await import_node_fs25.promises.stat(scanPath).catch(() => null);
     if (!stat || !stat.isDirectory()) {
       console.error(`neat watch: ${scanPath} is not a directory`);
       process.exit(2);
     }
-    const projectPaths = pathsForProject(project, import_node_path39.default.join(scanPath, "neat-out"));
-    const outPath = import_node_path39.default.resolve(process.env.NEAT_OUT_PATH ?? projectPaths.snapshotPath);
-    const errorsPath = import_node_path39.default.resolve(
-      process.env.NEAT_ERRORS_PATH ?? import_node_path39.default.join(import_node_path39.default.dirname(outPath), import_node_path39.default.basename(projectPaths.errorsPath))
+    const projectPaths = pathsForProject(project, import_node_path40.default.join(scanPath, "neat-out"));
+    const outPath = import_node_path40.default.resolve(process.env.NEAT_OUT_PATH ?? projectPaths.snapshotPath);
+    const errorsPath = import_node_path40.default.resolve(
+      process.env.NEAT_ERRORS_PATH ?? import_node_path40.default.join(import_node_path40.default.dirname(outPath), import_node_path40.default.basename(projectPaths.errorsPath))
     );
-    const staleEventsPath = import_node_path39.default.resolve(
-      process.env.NEAT_STALE_EVENTS_PATH ?? import_node_path39.default.join(import_node_path39.default.dirname(outPath), import_node_path39.default.basename(projectPaths.staleEventsPath))
+    const staleEventsPath = import_node_path40.default.resolve(
+      process.env.NEAT_STALE_EVENTS_PATH ?? import_node_path40.default.join(import_node_path40.default.dirname(outPath), import_node_path40.default.basename(projectPaths.staleEventsPath))
     );
-    const embeddingsCachePath = process.env.NEAT_EMBEDDINGS_CACHE_PATH ? import_node_path39.default.resolve(process.env.NEAT_EMBEDDINGS_CACHE_PATH) : void 0;
+    const embeddingsCachePath = process.env.NEAT_EMBEDDINGS_CACHE_PATH ? import_node_path40.default.resolve(process.env.NEAT_EMBEDDINGS_CACHE_PATH) : void 0;
     const handle = await startWatch(getGraph(project), {
       scanPath,
       outPath,