@ncukondo/reference-manager 0.32.0 → 0.33.0

package/dist/chunks/{index-CmkN2-2A.js → index-PkCQJBdt.js}

@@ -1,5 +1,5 @@
 import { Command, Option } from "commander";
-import { n as normalizePathForOutput, d as deleteDirectoryIfEmpty, p as parseFilename, i as isReservedRole, e as ensureDirectory, a as addAttachment, R as RESERVED_ROLES, b as generateFilename, c as findFulltextFiles, h as findFulltextFile, j as extensionToFormat, k as fulltextAttach, l as fulltextDiscover, m as fulltextFetch, o as fulltextConvert, q as fulltextGet, r as getExtension, s as getDefaultExportFromCjs, B as BUILTIN_STYLES, t as packageJson, u as getFulltextAttachmentTypes, v as startServerWithFileWatcher, w as BUILTIN_CONVERTER_NAMES, x as BUILTIN_CONVERTER_INFO } from "./index-B4-i4PrU.js";
+import { n as normalizePathForOutput, d as deleteDirectoryIfEmpty, p as parseFilename, i as isReservedRole, e as ensureDirectory, a as addAttachment, R as RESERVED_ROLES, b as generateFilename, c as findFulltextFiles, h as findFulltextFile, j as extensionToFormat, k as fulltextAttach, l as fulltextDiscover, m as fulltextFetch, o as fulltextConvert, q as fulltextGet, r as getExtension, s as getDefaultExportFromCjs, B as BUILTIN_STYLES, t as packageJson, u as getFulltextAttachmentTypes, v as startServerWithFileWatcher, w as BUILTIN_CONVERTER_NAMES, x as BUILTIN_CONVERTER_INFO } from "./index-a52FHX03.js";
 import { i as isEqual, M as MANAGED_CUSTOM_FIELDS, w as writeFileAtomic, L as Library, h as CslItemSchema, p as pickDefined, a as sortOrderSchema, z as paginationOptionsSchema, F as FileWatcher, b as sortFieldSchema, y as searchSortFieldSchema } from "./file-watcher-CWHg1yol.js";
 import * as fs from "node:fs";
 import { promises, readFileSync, existsSync, mkdirSync, writeFileSync, lstatSync, unlinkSync, rmSync, symlinkSync } from "node:fs";
@@ -8,7 +8,7 @@ import { homedir } from "node:os";
 import * as path from "node:path";
 import path__default, { join, basename, dirname, relative } from "node:path";
 import { readFile, unlink, stat, readdir, rename } from "node:fs/promises";
-import { o as openWithSystemApp, l as loadConfig, e as getDefaultCurrentDirConfigFilename, h as getDefaultUserConfigPath } from "./loader-BG2eomDC.js";
+import { o as openWithSystemApp, l as loadConfig, e as getDefaultCurrentDirConfigFilename, h as getDefaultUserConfigPath } from "./loader-CMu82BI5.js";
 import { spawn, spawnSync } from "node:child_process";
 import process$1, { stdin, stdout } from "node:process";
 import * as readline from "node:readline";
@@ -164,6 +164,9 @@ function formatAddJsonOutput(result, options) {
       output.idChanged = true;
       output.originalId = item.originalId;
     }
+    if (item.warnings && item.warnings.length > 0) {
+      output.warnings = item.warnings;
+    }
     if (full) {
       const cslItem = items2.get(item.id);
       if (cslItem) {
@@ -349,12 +352,30 @@ async function executeAdd(options, context) {
   if (stdinContent !== void 0) {
     importOptions.stdinContent = stdinContent;
   }
+  if (options.urlConfig !== void 0) {
+    importOptions.urlConfig = options.urlConfig;
+  }
+  if (options.archiveFormat !== void 0) {
+    importOptions.archiveFormat = options.archiveFormat;
+  }
+  if (options.noArchive !== void 0) {
+    importOptions.noArchive = options.noArchive;
+  }
+  if (options.attachmentsDirectory !== void 0) {
+    importOptions.attachmentsDirectory = options.attachmentsDirectory;
+  }
   return context.library.import(inputs, importOptions);
 }
 function formatAddedItem(item) {
   const idPart = item.idChanged ? `${item.id} (was: ${item.originalId})` : item.id;
   const title2 = item.title ?? "(no title)";
-  return `  - ${idPart}: "${title2}"`;
+  const lines = [`  - ${idPart}: "${title2}"`];
+  if (item.warnings && item.warnings.length > 0) {
+    for (const warning of item.warnings) {
+      lines.push(`    Warning: ${warning}`);
+    }
+  }
+  return lines.join("\n");
 }
 function formatFailedItem(item, verbose) {
   let error = item.error;
@@ -894,15 +915,15 @@ class OperationsLibrary {
   }
   // High-level operations
   async search(options) {
-    const { searchReferences } = await import("./index-B4-i4PrU.js").then((n) => n.H);
+    const { searchReferences } = await import("./index-a52FHX03.js").then((n) => n.H);
     return searchReferences(this.library, options);
   }
   async list(options) {
-    const { listReferences } = await import("./index-B4-i4PrU.js").then((n) => n.G);
+    const { listReferences } = await import("./index-a52FHX03.js").then((n) => n.G);
     return listReferences(this.library, options ?? {});
   }
   async cite(options) {
-    const { citeReferences } = await import("./index-B4-i4PrU.js").then((n) => n.F);
+    const { citeReferences } = await import("./index-a52FHX03.js").then((n) => n.F);
     const defaultStyle = options.defaultStyle ?? this.citationConfig?.defaultStyle;
     const cslDirectory = options.cslDirectory ?? this.citationConfig?.cslDirectory;
     const mergedOptions = {
@@ -913,36 +934,36 @@ class OperationsLibrary {
     return citeReferences(this.library, mergedOptions);
   }
   async import(inputs, options) {
-    const { addReferences } = await import("./index-B4-i4PrU.js").then((n) => n.D);
+    const { addReferences } = await import("./index-a52FHX03.js").then((n) => n.D);
     return addReferences(inputs, this.library, options ?? {});
   }
   async check(options) {
-    const { checkReferences } = await import("./index-B4-i4PrU.js").then((n) => n.E);
+    const { checkReferences } = await import("./index-a52FHX03.js").then((n) => n.E);
     return checkReferences(this.library, options);
   }
   // Attachment operations
   async attachAdd(options) {
-    const { addAttachment: addAttachment2 } = await import("./index-B8iEozpf.js");
+    const { addAttachment: addAttachment2 } = await import("./index-DpZ-Ma7M.js");
     return addAttachment2(this.library, options);
   }
   async attachList(options) {
-    const { listAttachments: listAttachments2 } = await import("./index-B8iEozpf.js");
+    const { listAttachments: listAttachments2 } = await import("./index-DpZ-Ma7M.js");
     return listAttachments2(this.library, options);
   }
   async attachGet(options) {
-    const { getAttachment: getAttachment2 } = await import("./index-B8iEozpf.js");
+    const { getAttachment: getAttachment2 } = await import("./index-DpZ-Ma7M.js");
     return getAttachment2(this.library, options);
   }
   async attachDetach(options) {
-    const { detachAttachment: detachAttachment2 } = await import("./index-B8iEozpf.js");
+    const { detachAttachment: detachAttachment2 } = await import("./index-DpZ-Ma7M.js");
     return detachAttachment2(this.library, options);
   }
   async attachSync(options) {
-    const { syncAttachments: syncAttachments2 } = await import("./index-B8iEozpf.js");
+    const { syncAttachments: syncAttachments2 } = await import("./index-DpZ-Ma7M.js");
     return syncAttachments2(this.library, options);
   }
   async attachOpen(options) {
-    const { openAttachment: openAttachment2 } = await import("./index-B8iEozpf.js");
+    const { openAttachment: openAttachment2 } = await import("./index-DpZ-Ma7M.js");
     return openAttachment2(this.library, options);
   }
 }
@@ -1807,7 +1828,7 @@ function getAttachExitCode(result) {
 }
 async function executeInteractiveSelect$3(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -2472,7 +2493,7 @@ async function handleCheckAction(identifiers, options, globalOpts) {
     const jsonOptions = buildJsonOptionsFromRefs(options, outputFormat, result, allRefs);
     outputCheckResult(result, outputFormat, jsonOptions);
     if (options.fix && result.summary.warnings > 0 && allRefs) {
-      const { runFixInteraction } = await import("./fix-interaction-DWUzp9Ri.js");
+      const { runFixInteraction } = await import("./fix-interaction-D_zhtL9k.js");
       const findItem = (id2) => allRefs.find((item) => item.id === id2);
       const fixResult = await runFixInteraction(result.results, context.library, findItem);
       const removedSuffix = fixResult.removed.length > 0 ? `, ${fixResult.removed.length} removed` : "";
@@ -2540,7 +2561,7 @@ function outputCheckError(error, format2) {
 }
 async function selectReferencesInteractively(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferenceItemsOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferenceItemsOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   if (allReferences.length === 0) {
     process.stderr.write("No references in library.\n");
@@ -2608,8 +2629,8 @@ function getCiteExitCode(result) {
 }
 async function executeInteractiveCite(options, context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { runCiteFlow } = await import("./index-BuQm8A5F.js");
-  const { buildStyleChoices, listCustomStyles } = await import("./style-select-aXByJLOo.js");
+  const { runCiteFlow } = await import("./index-DMShdNwY.js");
+  const { buildStyleChoices, listCustomStyles } = await import("./style-select-CQ4BBBZJ.js");
   const { search } = await import("./file-watcher-CWHg1yol.js").then((n) => n.B);
   const { tokenize } = await import("./file-watcher-CWHg1yol.js").then((n) => n.A);
   const { checkTTY } = await import("./tty-BMyaEOhX.js");
@@ -2824,6 +2845,15 @@ const CONFIG_KEY_REGISTRY = [
   },
   // attachments section
   { key: "attachments.directory", type: "string", description: "Attachments storage directory" },
+  // url section
+  {
+    key: "url.archive_format",
+    type: "enum",
+    description: "Default archive format for URL import",
+    enumValues: ["mhtml", "html"]
+  },
+  { key: "url.browser_path", type: "string", description: "Browser executable path" },
+  { key: "url.timeout", type: "integer", description: "Navigation timeout (seconds)" },
   // cli section
   {
     key: "cli.default_limit",
@@ -7292,7 +7322,7 @@ function formatEditOutput(result) {
 }
 async function executeInteractiveEdit(options, context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: true }, config2.cli.tui)
@@ -10868,7 +10898,7 @@ function getFulltextExitCode(result) {
 }
 async function executeInteractiveSelect$2(context, config2, multiSelect = false) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect }, config2.cli.tui)
@@ -32525,7 +32555,7 @@ async function mcpStart(options) {
 async function executeRemove(options, context) {
   const { identifier, idType = "id", fulltextDirectory, deleteFulltext = false } = options;
   if (context.mode === "local" && deleteFulltext && fulltextDirectory) {
-    const { removeReference } = await import("./index-B4-i4PrU.js").then((n) => n.A);
+    const { removeReference } = await import("./index-a52FHX03.js").then((n) => n.A);
     return removeReference(context.library, {
       identifier,
       idType,
@@ -32580,7 +32610,7 @@ Continue?`;
 }
 async function executeInteractiveRemove(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferenceItemsOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferenceItemsOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const selectedItems = await withAlternateScreen2(
     () => selectReferenceItemsOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -32805,7 +32835,7 @@ async function executeInteractiveSearch(options, context, config2) {
   validateInteractiveOptions(options);
   const { checkTTY } = await import("./tty-BMyaEOhX.js");
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { runSearchFlow } = await import("./index-BuQm8A5F.js");
+  const { runSearchFlow } = await import("./index-DMShdNwY.js");
   const { search } = await import("./file-watcher-CWHg1yol.js").then((n) => n.B);
   const { tokenize } = await import("./file-watcher-CWHg1yol.js").then((n) => n.A);
   checkTTY();
@@ -32824,7 +32854,7 @@ async function executeInteractiveSearch(options, context, config2) {
     })
   );
   if (result.selectedItems && !result.cancelled) {
-    const { isSideEffectAction } = await import("./action-menu-DLEwSKrj.js");
+    const { isSideEffectAction } = await import("./action-menu-i1v02Qig.js");
     if (isSideEffectAction(result.action)) {
       await executeSideEffectAction(result.action, result.selectedItems, context, config2);
       return { output: "", cancelled: false, action: result.action };
@@ -32840,7 +32870,7 @@ async function executeSideEffectAction(action, items2, context, config2) {
   switch (action) {
     case "open-url": {
       const { resolveDefaultUrl: resolveDefaultUrl2 } = await Promise.resolve().then(() => url);
-      const { openWithSystemApp: openWithSystemApp2 } = await import("./loader-BG2eomDC.js").then((n) => n.j);
+      const { openWithSystemApp: openWithSystemApp2 } = await import("./loader-CMu82BI5.js").then((n) => n.j);
       const item = items2[0];
       if (!item) return;
       const url$1 = resolveDefaultUrl2(item);
@@ -33122,7 +33152,7 @@ function formatShowOutput(item, options, attachmentsDirectory) {
 }
 async function executeInteractiveSelect$1(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -33371,7 +33401,7 @@ function formatUpdateOutput(result, identifier) {
 }
 async function executeInteractiveUpdate(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -33666,7 +33696,7 @@ function getUrlExitCode(result) {
 }
 async function executeInteractiveSelect(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const { selectReferencesOrExit } = await import("./reference-select-aEB3-5rp.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -34255,6 +34285,14 @@ function buildAddOptions(inputs, options, config2, stdinContent) {
   if (Object.keys(pubmedConfig).length > 0) {
     addOptions.pubmedConfig = pubmedConfig;
   }
+  addOptions.urlConfig = config2.url;
+  if (options.archiveFormat !== void 0) {
+    addOptions.archiveFormat = options.archiveFormat;
+  }
+  if (options.archive === false) {
+    addOptions.noArchive = true;
+  }
+  addOptions.attachmentsDirectory = config2.attachments.directory;
   return addOptions;
 }
 async function outputAddResultJson(result, context, full) {
@@ -34279,7 +34317,7 @@ function shouldAutoFetch(cliFlag, configEnabled) {
   return configEnabled;
 }
 async function performAutoFetch(addedItems, context, config2) {
-  const { fulltextFetch: fulltextFetch2 } = await import("./index-B4-i4PrU.js").then((n) => n.z);
+  const { fulltextFetch: fulltextFetch2 } = await import("./index-a52FHX03.js").then((n) => n.z);
   const fetchResults = await autoFetchFulltext(addedItems, context, {
     fulltextConfig: config2.fulltext,
     fulltextDirectory: config2.attachments.directory,
@@ -34341,7 +34379,12 @@ function registerAddCommand(program) {
     "-i, --input <format>",
     "Input format: json|bibtex|ris|pmid|doi|isbn|arxiv|auto",
     "auto"
-  ).option("--verbose", "Show detailed error information").option("-o, --output <format>", "Output format: json|text", "text").option("--full", "Include full CSL-JSON data in JSON output").option("--fetch-fulltext", "Auto-fetch OA fulltext after adding").option("--no-fetch-fulltext", "Disable auto-fetch fulltext (overrides config)").action(async (inputs, options) => {
+  ).option("--verbose", "Show detailed error information").option("-o, --output <format>", "Output format: json|text", "text").option("--full", "Include full CSL-JSON data in JSON output").option("--fetch-fulltext", "Auto-fetch OA fulltext after adding").option("--no-fetch-fulltext", "Disable auto-fetch fulltext (overrides config)").addOption(
+    new Option("--archive-format <format>", "Archive format for URL import").choices([
+      "mhtml",
+      "html"
+    ])
+  ).option("--no-archive", "Skip archive creation for URL import").action(async (inputs, options) => {
     await handleAddAction(inputs, options, program);
   });
 }
@@ -34593,4 +34636,4 @@ export {
   restoreStdinAfterInk as r,
   syncAttachments as s
 };
-//# sourceMappingURL=index-CmkN2-2A.js.map
+//# sourceMappingURL=index-PkCQJBdt.js.map