@ncukondo/reference-manager 0.30.1 → 0.32.0

package/dist/chunks/{index-4w0pu_0o.js → index-CmkN2-2A.js}

@@ -1,11 +1,12 @@
 import { Command, Option } from "commander";
-import { n as normalizePathForOutput, d as deleteDirectoryIfEmpty, p as parseFilename, i as isReservedRole, e as ensureDirectory, a as addAttachment, R as RESERVED_ROLES, b as generateFilename, c as findFulltextFiles, h as findFulltextFile, j as extensionToFormat, k as fulltextAttach, l as fulltextDiscover, m as fulltextFetch, o as fulltextConvert, q as fulltextGet, r as getExtension, s as getDefaultExportFromCjs, B as BUILTIN_STYLES, t as packageJson, u as getFulltextAttachmentTypes, v as startServerWithFileWatcher, w as BUILTIN_CONVERTER_NAMES, x as BUILTIN_CONVERTER_INFO } from "./index-C_mW5LMY.js";
+import { n as normalizePathForOutput, d as deleteDirectoryIfEmpty, p as parseFilename, i as isReservedRole, e as ensureDirectory, a as addAttachment, R as RESERVED_ROLES, b as generateFilename, c as findFulltextFiles, h as findFulltextFile, j as extensionToFormat, k as fulltextAttach, l as fulltextDiscover, m as fulltextFetch, o as fulltextConvert, q as fulltextGet, r as getExtension, s as getDefaultExportFromCjs, B as BUILTIN_STYLES, t as packageJson, u as getFulltextAttachmentTypes, v as startServerWithFileWatcher, w as BUILTIN_CONVERTER_NAMES, x as BUILTIN_CONVERTER_INFO } from "./index-B4-i4PrU.js";
 import { i as isEqual, M as MANAGED_CUSTOM_FIELDS, w as writeFileAtomic, L as Library, h as CslItemSchema, p as pickDefined, a as sortOrderSchema, z as paginationOptionsSchema, F as FileWatcher, b as sortFieldSchema, y as searchSortFieldSchema } from "./file-watcher-CWHg1yol.js";
 import * as fs from "node:fs";
-import { promises, readFileSync, existsSync, mkdirSync, writeFileSync } from "node:fs";
+import { promises, readFileSync, existsSync, mkdirSync, writeFileSync, lstatSync, unlinkSync, rmSync, symlinkSync } from "node:fs";
 import * as os from "node:os";
+import { homedir } from "node:os";
 import * as path from "node:path";
-import path__default, { join, basename, dirname } from "node:path";
+import path__default, { join, basename, dirname, relative } from "node:path";
 import { readFile, unlink, stat, readdir, rename } from "node:fs/promises";
 import { o as openWithSystemApp, l as loadConfig, e as getDefaultCurrentDirConfigFilename, h as getDefaultUserConfigPath } from "./loader-BG2eomDC.js";
 import { spawn, spawnSync } from "node:child_process";
@@ -613,11 +614,11 @@ function inferFromFilename(filename) {
   if (!parsed) {
     return { filename, role: "other", label: filename };
   }
-  const { role, label } = parsed;
+  const { role, label: label2 } = parsed;
   if (isReservedRole(role)) {
-    return label ? { filename, role, label } : { filename, role };
+    return label2 ? { filename, role, label: label2 } : { filename, role };
   }
-  const basename2 = label ? `${role}-${label}` : role;
+  const basename2 = label2 ? `${role}-${label2}` : role;
   return { filename, role: "other", label: basename2 };
 }
 async function getFilesOnDisk(dirPath) {
@@ -656,11 +657,11 @@ function buildUpdatedFiles(metadataFiles, newFiles, missingFiles, shouldApplyNew
     for (const newFile of newFiles) {
       const override = roleOverrides?.[newFile.filename];
       const role = override?.role ?? newFile.role;
-      const label = override ? override.label : newFile.label;
+      const label2 = override ? override.label : newFile.label;
       const attachmentFile = {
         filename: newFile.filename,
         role,
-        ...label && { label }
+        ...label2 && { label: label2 }
       };
       updatedFiles.push(attachmentFile);
     }
@@ -893,15 +894,15 @@ class OperationsLibrary {
   }
   // High-level operations
   async search(options) {
-    const { searchReferences } = await import("./index-C_mW5LMY.js").then((n) => n.H);
+    const { searchReferences } = await import("./index-B4-i4PrU.js").then((n) => n.H);
     return searchReferences(this.library, options);
   }
   async list(options) {
-    const { listReferences } = await import("./index-C_mW5LMY.js").then((n) => n.G);
+    const { listReferences } = await import("./index-B4-i4PrU.js").then((n) => n.G);
     return listReferences(this.library, options ?? {});
   }
   async cite(options) {
-    const { citeReferences } = await import("./index-C_mW5LMY.js").then((n) => n.F);
+    const { citeReferences } = await import("./index-B4-i4PrU.js").then((n) => n.F);
     const defaultStyle = options.defaultStyle ?? this.citationConfig?.defaultStyle;
     const cslDirectory = options.cslDirectory ?? this.citationConfig?.cslDirectory;
     const mergedOptions = {
@@ -912,36 +913,36 @@ class OperationsLibrary {
     return citeReferences(this.library, mergedOptions);
   }
   async import(inputs, options) {
-    const { addReferences } = await import("./index-C_mW5LMY.js").then((n) => n.D);
+    const { addReferences } = await import("./index-B4-i4PrU.js").then((n) => n.D);
     return addReferences(inputs, this.library, options ?? {});
   }
   async check(options) {
-    const { checkReferences } = await import("./index-C_mW5LMY.js").then((n) => n.E);
+    const { checkReferences } = await import("./index-B4-i4PrU.js").then((n) => n.E);
     return checkReferences(this.library, options);
   }
   // Attachment operations
   async attachAdd(options) {
-    const { addAttachment: addAttachment2 } = await import("./index-BZMfDG4M.js");
+    const { addAttachment: addAttachment2 } = await import("./index-B8iEozpf.js");
     return addAttachment2(this.library, options);
   }
   async attachList(options) {
-    const { listAttachments: listAttachments2 } = await import("./index-BZMfDG4M.js");
+    const { listAttachments: listAttachments2 } = await import("./index-B8iEozpf.js");
     return listAttachments2(this.library, options);
   }
   async attachGet(options) {
-    const { getAttachment: getAttachment2 } = await import("./index-BZMfDG4M.js");
+    const { getAttachment: getAttachment2 } = await import("./index-B8iEozpf.js");
     return getAttachment2(this.library, options);
   }
   async attachDetach(options) {
-    const { detachAttachment: detachAttachment2 } = await import("./index-BZMfDG4M.js");
+    const { detachAttachment: detachAttachment2 } = await import("./index-B8iEozpf.js");
     return detachAttachment2(this.library, options);
   }
   async attachSync(options) {
-    const { syncAttachments: syncAttachments2 } = await import("./index-BZMfDG4M.js");
+    const { syncAttachments: syncAttachments2 } = await import("./index-B8iEozpf.js");
     return syncAttachments2(this.library, options);
   }
   async attachOpen(options) {
-    const { openAttachment: openAttachment2 } = await import("./index-BZMfDG4M.js");
+    const { openAttachment: openAttachment2 } = await import("./index-B8iEozpf.js");
     return openAttachment2(this.library, options);
   }
 }
@@ -1804,9 +1805,9 @@ function formatSyncPreview(result) {
 function getAttachExitCode(result) {
   return result.success ? 0 : 1;
 }
-async function executeInteractiveSelect$2(context, config2) {
+async function executeInteractiveSelect$3(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -1818,7 +1819,7 @@ async function resolveIdentifier(identifierArg, context, config2) {
     return identifierArg;
   }
   if (isTTY()) {
-    return executeInteractiveSelect$2(context, config2);
+    return executeInteractiveSelect$3(context, config2);
   }
   const stdinId = await readIdentifierFromStdin();
   if (!stdinId) {
@@ -2413,8 +2414,8 @@ function countFindingTypes(result) {
 function formatCheckTextOutput(result) {
   const lines = [];
   for (const r of result.results) {
-    const label = getStatusLabel(r);
-    lines.push(`${label} ${r.id}`);
+    const label2 = getStatusLabel(r);
+    lines.push(`${label2} ${r.id}`);
     for (const finding of r.findings) {
       lines.push(...formatFindingDetails(finding, r.id));
     }
@@ -2431,9 +2432,9 @@ function formatCheckTextOutput(result) {
     ["versionChanged", "version changed"]
   ];
   const knownKeys = new Set(summaryItems.map(([key]) => key));
-  for (const [key, label] of summaryItems) {
+  for (const [key, label2] of summaryItems) {
     const count = fc[key] ?? 0;
-    if (count > 0) parts.push(`${count} ${label}`);
+    if (count > 0) parts.push(`${count} ${label2}`);
   }
   for (const [key, count] of Object.entries(fc)) {
     if (!knownKeys.has(key) && count > 0) parts.push(`${count} ${key}`);
@@ -2471,7 +2472,7 @@ async function handleCheckAction(identifiers, options, globalOpts) {
     const jsonOptions = buildJsonOptionsFromRefs(options, outputFormat, result, allRefs);
     outputCheckResult(result, outputFormat, jsonOptions);
     if (options.fix && result.summary.warnings > 0 && allRefs) {
-      const { runFixInteraction } = await import("./fix-interaction-C3OrF3yU.js");
+      const { runFixInteraction } = await import("./fix-interaction-DWUzp9Ri.js");
       const findItem = (id2) => allRefs.find((item) => item.id === id2);
       const fixResult = await runFixInteraction(result.results, context.library, findItem);
       const removedSuffix = fixResult.removed.length > 0 ? `, ${fixResult.removed.length} removed` : "";
@@ -2539,7 +2540,7 @@ function outputCheckError(error, format2) {
 }
 async function selectReferencesInteractively(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferenceItemsOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferenceItemsOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   if (allReferences.length === 0) {
     process.stderr.write("No references in library.\n");
@@ -2607,8 +2608,8 @@ function getCiteExitCode(result) {
 }
 async function executeInteractiveCite(options, context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { runCiteFlow } = await import("./index-CA9y5wSm.js");
-  const { buildStyleChoices, listCustomStyles } = await import("./style-select-kfWjEg1X.js");
+  const { runCiteFlow } = await import("./index-BuQm8A5F.js");
+  const { buildStyleChoices, listCustomStyles } = await import("./style-select-aXByJLOo.js");
   const { search } = await import("./file-watcher-CWHg1yol.js").then((n) => n.B);
   const { tokenize } = await import("./file-watcher-CWHg1yol.js").then((n) => n.A);
   const { checkTTY } = await import("./tty-BMyaEOhX.js");
@@ -7291,7 +7292,7 @@ function formatEditOutput(result) {
 }
 async function executeInteractiveEdit(options, context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: true }, config2.cli.tui)
@@ -10865,9 +10866,9 @@ function formatFulltextConvertOutput(result) {
 function getFulltextExitCode(result) {
   return result.success ? 0 : 1;
 }
-async function executeInteractiveSelect$1(context, config2, multiSelect = false) {
+async function executeInteractiveSelect$2(context, config2, multiSelect = false) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect }, config2.cli.tui)
@@ -10904,7 +10905,7 @@ async function handleFulltextAttachAction(identifierArg, filePathArg, options, g
         setExitCode(ExitCode.ERROR);
         return;
       }
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     }
     const { type: type2, filePath } = parseFulltextAttachTypeAndPath(filePathArg, options);
     const stdinContent = !filePath && type2 ? await readStdinBuffer() : void 0;
@@ -10990,7 +10991,7 @@ async function resolveGetIdentifiers(identifierArgs, context, config2) {
     return identifierArgs;
   }
   if (isTTY()) {
-    return executeInteractiveSelect$1(context, config2, true);
+    return executeInteractiveSelect$2(context, config2, true);
   }
   const stdinIds = await readIdentifiersFromStdin();
   if (stdinIds.length === 0) {
@@ -11071,7 +11072,7 @@ async function handleFulltextDetachAction(identifierArg, options, globalOpts) {
     if (identifierArg) {
       identifier = identifierArg;
     } else if (isTTY()) {
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     } else {
       const stdinId = await readIdentifierFromStdin();
       if (!stdinId) {
@@ -11111,7 +11112,7 @@ async function handleFulltextOpenAction(identifierArg, options, globalOpts) {
     if (identifierArg) {
       identifier = identifierArg;
     } else if (isTTY()) {
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     } else {
       const stdinId = await readIdentifierFromStdin();
       if (!stdinId) {
@@ -11151,7 +11152,7 @@ async function handleFulltextDiscoverAction(identifierArg, options, globalOpts)
     if (identifierArg) {
       identifier = identifierArg;
     } else if (isTTY()) {
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     } else {
       const stdinId = await readIdentifierFromStdin();
       if (!stdinId) {
@@ -11191,7 +11192,7 @@ async function handleFulltextFetchAction(identifierArg, options, globalOpts) {
     if (identifierArg) {
       identifier = identifierArg;
     } else if (isTTY()) {
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     } else {
       const stdinId = await readIdentifierFromStdin();
       if (!stdinId) {
@@ -11231,7 +11232,7 @@ async function handleFulltextConvertAction(identifierArg, options, globalOpts) {
     if (identifierArg) {
       identifier = identifierArg;
     } else if (isTTY()) {
-      identifier = (await executeInteractiveSelect$1(context, config2))[0];
+      identifier = (await executeInteractiveSelect$2(context, config2))[0];
     } else {
       const stdinId = await readIdentifierFromStdin();
       if (!stdinId) {
@@ -11290,6 +11291,79 @@ const fulltext = /* @__PURE__ */ Object.freeze(/* @__PURE__ */ Object.defineProp
   handleFulltextGetAction,
   handleFulltextOpenAction
 }, Symbol.toStringTag, { value: "Module" }));
+const skillMd = '---\nname: ref\ndescription: Manage academic references in CSL-JSON format. Add papers by DOI/PMID/ISBN/arXiv, search and list references, generate citations, manage full-text PDFs, and check for retractions.\nallowed-tools:\n  - Bash\n  - Read\n  - Write\n  - Edit\n  - Glob\n  - Grep\n---\n\n# ref — Reference Manager\n\nA CLI tool for managing academic references using CSL-JSON as the single source of truth.\n\n## Quick Reference\n\n| Task | Command |\n|------|---------|\n| Add by DOI | `ref add 10.1234/example` |\n| Add by PMID | `ref add 12345678` |\n| Add by ISBN | `ref add 978-0-123456-78-9` |\n| Add by arXiv | `ref add 2301.12345` |\n| Add from BibTeX | `ref add references.bib` |\n| Add from RIS | `ref add references.ris` |\n| Search | `ref search "query"` |\n| List all | `ref list` |\n| Show details | `ref show <id>` |\n| Generate citation | `ref cite <id>` |\n| Export | `ref export <id> --output bibtex` |\n| Attach full-text | `ref fulltext attach <id> paper.pdf` |\n| Fetch full-text | `ref fulltext fetch <id>` |\n| Check retractions | `ref check <id>` |\n| Remove | `ref remove <id>` |\n| Update fields | `ref update <id> --set "title=New Title"` |\n| Configure | `ref config set <key> <value>` |\n\n## Search Syntax\n\n- Simple text: `ref search "machine learning"`\n- By author: `ref search "author:Smith"`\n- By year: `ref search "year:2024"`\n- By type: `ref search "type:article-journal"`\n- By tag: `ref search "tag:review"`\n- Combined: `ref search "author:Smith year:2024"`\n- Case-sensitive: prefix with `C/` (e.g., `ref search "C/RNA"`)\n\n## Output Formats\n\nMost commands support `--output` or `--json` flags:\n\n- `--json` — JSON output for programmatic use\n- `--output bibtex` — BibTeX format\n- `--output yaml` — YAML format\n\n## Full Help\n\nRun `ref --help` for all commands and options.\nRun `ref <command> --help` for command-specific help.\n';
+const fulltextMd = '---\nname: ref/fulltext\ndescription: Guide for managing full-text PDFs and Markdown files. Covers fetching, attaching, converting, and organizing full-text content.\n---\n\n# Full-Text Management\n\nGuide for working with full-text files (PDFs and Markdown) using `ref`.\n\n## Attach Files\n\n```bash\n# Attach a PDF\nref fulltext attach <id> paper.pdf\n\n# Attach Markdown\nref fulltext attach <id> paper.md\n```\n\n## Fetch Open Access\n\n```bash\n# Auto-discover and download OA full text\nref fulltext fetch <id>\n\n# Fetch with auto-attach on add\nref add 10.1234/example --fetch-fulltext\n```\n\n## Convert Formats\n\n```bash\n# Convert PDF to Markdown (requires external converter)\nref fulltext convert <id>\n\n# Supported converters: marker, docling, mineru, pymupdf\n# Configure custom converter:\nref config set fulltext.pdfConverter.command "marker"\nref config set fulltext.pdfConverter.args "{input} --output {output_dir}"\n```\n\n## Retrieve Full Text\n\n```bash\n# Get file path\nref fulltext get <id>\n\n# Get Markdown content to stdout\nref fulltext get <id> --stdout\n\n# Prefer specific format\nref fulltext get <id> --markdown\nref fulltext get <id> --pdf\n\n# Open in default system viewer\nref fulltext open <id>\n```\n\n## Check Availability\n\n```bash\n# Discover OA sources without downloading\nref fulltext discover <id>\n```\n\n## Detach\n\n```bash\n# Remove full-text association (file remains on disk)\nref fulltext detach <id>\n```\n\n## Tips\n\n- Use `ref fulltext get <id> --stdout` to pipe content to other tools\n- Full-text files are stored in the attachments directory (see `ref config get attachments.directory`)\n- Use `ref show <id>` to see full-text status alongside metadata\n- Markdown is preferred for AI-readable content; use `ref fulltext convert` after attaching PDF\n';
+const manuscriptWritingMd = "---\nname: ref/manuscript-writing\ndescription: Workflow for managing references while writing academic manuscripts. Covers citation generation, bibliography export, and reference verification.\n---\n\n# Manuscript Writing Workflow\n\nGuide for managing references during academic manuscript writing with `ref`.\n\n## 1. Find and Cite\n\n```bash\n# Search your library\nref search \"Smith 2024\"\n\n# Generate an inline citation\nref cite <id>\n\n# Generate citation in specific style\nref cite <id> --style apa\nref cite <id> --style vancouver\n\n# Get Pandoc/LaTeX citation key\nref cite <id> --key\n```\n\n## 2. Build Bibliography\n\n```bash\n# Export all cited references as BibTeX\nref export <id1> <id2> <id3> --output bibtex > references.bib\n\n# Export by search query\nref search \"tag:cited\" --output bibtex > references.bib\n\n# Export all references\nref export --all --output bibtex > library.bib\n```\n\n## 3. Add New References During Writing\n\n```bash\n# Quick add by DOI from a paper you're reading\nref add 10.1234/example\n\n# Add from clipboard BibTeX (pipe from stdin)\necho '<bibtex>' | ref add -\n\n# Add and immediately get citation key\nref add 10.1234/example --json | jq -r '.added[0].id'\n```\n\n## 4. Verify Before Submission\n\n```bash\n# Check all cited references for retractions\nref check <id1> <id2> <id3>\n\n# Verify metadata accuracy\nref check <id> --metadata\n\n# Show full details for final review\nref show <id>\n```\n\n## 5. Full-Text Management\n\n```bash\n# Attach supplementary files\nref fulltext attach <id> paper.pdf\nref fulltext attach <id> supplement.pdf\n\n# Get full-text path for reading\nref fulltext get <id>\n\n# Open in default viewer\nref fulltext open <id>\n```\n\n## Tips\n\n- Use `ref cite <id> --key` to get `@AuthorYear` keys for Pandoc\n- Use `ref show <id> --output yaml` for quick metadata overview\n- Use `ref url <id>` to get DOI/PubMed URLs for linking\n- Tag references with `ref update <id> --set \"tags=cited\"` to track what's in the manuscript\n";
+const systematicReviewMd = '---\nname: ref/systematic-review\ndescription: Workflow for conducting systematic literature reviews using reference-manager. Covers search strategy, screening, and evidence synthesis.\n---\n\n# Systematic Review Workflow\n\nGuide for conducting systematic literature reviews with `ref`.\n\n## 1. Build Search Set\n\nAdd references from multiple sources:\n\n```bash\n# From DOIs (e.g., exported from database search)\nref add 10.1234/study1 10.1234/study2 10.1234/study3\n\n# From BibTeX exported by PubMed/Scopus/Web of Science\nref add pubmed-results.bib\nref add scopus-results.ris\n\n# By PMID list\nref add 12345678 23456789 34567890\n```\n\n## 2. Tag and Organize\n\nUse tags to track screening stages:\n\n```bash\n# Tag references for screening\nref update <id> --set "tags=screening"\n\n# After title/abstract screening\nref update <id> --set "tags=included"\nref update <id> --set "tags=excluded"\n\n# After full-text review\nref update <id> --set "tags=final-included"\n```\n\n## 3. Full-Text Collection\n\n```bash\n# Auto-fetch open access full texts\nref fulltext fetch <id>\n\n# Attach manually obtained PDFs\nref fulltext attach <id> path/to/paper.pdf\n\n# Convert PDF to Markdown for text analysis\nref fulltext convert <id>\n```\n\n## 4. Quality Check\n\n```bash\n# Check for retractions or corrections\nref check <id>\n\n# Verify metadata against upstream sources\nref check <id> --metadata\n```\n\n## 5. Export for Analysis\n\n```bash\n# Export included studies as BibTeX\nref search "tag:final-included" --output bibtex > included.bib\n\n# Export as JSON for custom analysis\nref search "tag:final-included" --json > included.json\n```\n\n## Tips\n\n- Use `ref list --sort date-desc` to review chronologically\n- Use `ref search "tag:screening"` to find unprocessed references\n- Use `ref show <id>` to inspect full metadata before decisions\n- Duplicates are auto-detected on `ref add` — review skip messages\n';
+const SKILL_FILES = [
+  ["SKILL.md", skillMd],
+  ["references/systematic-review.md", systematicReviewMd],
+  ["references/manuscript-writing.md", manuscriptWritingMd],
+  ["references/fulltext.md", fulltextMd]
+];
+async function writeSkills(options) {
+  const { targetDir, force = false, user = false } = options;
+  const baseDir = user ? homedir() : targetDir;
+  const agentsDir = join(baseDir, ".agents", "skills", "ref");
+  const claudeDir = join(baseDir, ".claude", "skills");
+  const claudeLink = join(claudeDir, "ref");
+  const written = [];
+  const skipped = [];
+  mkdirSync(join(agentsDir, "references"), { recursive: true });
+  for (const [relativePath, content] of SKILL_FILES) {
+    const filePath = join(agentsDir, relativePath);
+    if (existsSync(filePath) && !force) {
+      skipped.push(relativePath);
+      continue;
+    }
+    writeFileSync(filePath, content, "utf-8");
+    written.push(relativePath);
+  }
+  let linkCreated = false;
+  mkdirSync(claudeDir, { recursive: true });
+  if (force && existsSync(claudeLink)) {
+    const stat2 = lstatSync(claudeLink);
+    if (stat2.isSymbolicLink()) {
+      unlinkSync(claudeLink);
+    } else if (stat2.isDirectory()) {
+      rmSync(claudeLink, { recursive: true, force: true });
+    }
+  }
+  if (!existsSync(claudeLink)) {
+    const linkTarget = relative(claudeDir, agentsDir);
+    symlinkSync(linkTarget, claudeLink, "junction");
+    linkCreated = true;
+  }
+  return { written, skipped, linkCreated };
+}
+async function executeInstallSkills(options) {
+  return writeSkills({
+    targetDir: process.cwd(),
+    force: options.force,
+    ...options.user != null && { user: options.user }
+  });
+}
+function formatInstallSkillsOutput(result) {
+  const lines = [];
+  if (result.written.length === 0 && result.skipped.length > 0) {
+    lines.push("Skills already up-to-date. Use --force to overwrite.");
+    lines.push(`  ${result.skipped.length} files skipped`);
+    return lines.join("\n");
+  }
+  if (result.written.length > 0) {
+    lines.push(`Installed ${result.written.length} skill files to .agents/skills/ref/`);
+    for (const file of result.written) {
+      lines.push(`  + ${file}`);
+    }
+  }
+  if (result.skipped.length > 0) {
+    lines.push(`  ${result.skipped.length} files skipped (already exist)`);
+  }
+  if (result.linkCreated) {
+    lines.push("Created symlink: .claude/skills/ref -> .agents/skills/ref");
+  }
+  return lines.join("\n");
+}
 function buildResourceIndicators(item) {
   const labels = [];
   const attachments = item.custom?.attachments;
@@ -11310,14 +11384,14 @@ function buildResourceIndicators(item) {
   if (Array.isArray(tags) && tags.length > 0) labels.push("tag");
   return labels.join(" ");
 }
-function formatAuthor(author) {
+function formatAuthor$1(author) {
   if (author.literal) return author.literal;
   const family = author.family || "";
   const givenInitial = author.given ? `${author.given.charAt(0)}.` : "";
   return givenInitial ? `${family}, ${givenInitial}` : family;
 }
 function formatAuthors(authors) {
-  return authors.map(formatAuthor).join("; ");
+  return authors.map(formatAuthor$1).join("; ");
 }
 function formatSingleReference(item) {
   const lines = [];
@@ -23701,9 +23775,9 @@ function requireCodegen() {
       }
     }
     class Label extends Node {
-      constructor(label) {
+      constructor(label2) {
         super();
-        this.label = label;
+        this.label = label2;
         this.names = {};
       }
       render({ _n }) {
@@ -23711,14 +23785,14 @@ function requireCodegen() {
       }
     }
     class Break extends Node {
-      constructor(label) {
+      constructor(label2) {
         super();
-        this.label = label;
+        this.label = label2;
         this.names = {};
       }
       render({ _n }) {
-        const label = this.label ? ` ${this.label}` : "";
-        return `break${label};` + _n;
+        const label2 = this.label ? ` ${this.label}` : "";
+        return `break${label2};` + _n;
       }
     }
     class Throw extends Node {
@@ -24130,12 +24204,12 @@ function requireCodegen() {
         return this._endBlockNode(For);
       }
       // `label` statement
-      label(label) {
-        return this._leafNode(new Label(label));
+      label(label2) {
+        return this._leafNode(new Label(label2));
       }
       // `break` statement
-      break(label) {
-        return this._leafNode(new Break(label));
+      break(label2) {
+        return this._leafNode(new Break(label2));
       }
       // `return` statement
       return(value) {
@@ -26836,49 +26910,49 @@ function requireFastUri() {
     schemelessOptions.skipEscape = true;
     return serialize2(resolved, schemelessOptions);
   }
-  function resolveComponent(base, relative, options, skipNormalization) {
+  function resolveComponent(base, relative2, options, skipNormalization) {
     const target = {};
     if (!skipNormalization) {
       base = parse2(serialize2(base, options), options);
-      relative = parse2(serialize2(relative, options), options);
+      relative2 = parse2(serialize2(relative2, options), options);
     }
     options = options || {};
-    if (!options.tolerant && relative.scheme) {
-      target.scheme = relative.scheme;
-      target.userinfo = relative.userinfo;
-      target.host = relative.host;
-      target.port = relative.port;
-      target.path = removeDotSegments(relative.path || "");
-      target.query = relative.query;
+    if (!options.tolerant && relative2.scheme) {
+      target.scheme = relative2.scheme;
+      target.userinfo = relative2.userinfo;
+      target.host = relative2.host;
+      target.port = relative2.port;
+      target.path = removeDotSegments(relative2.path || "");
+      target.query = relative2.query;
     } else {
-      if (relative.userinfo !== void 0 || relative.host !== void 0 || relative.port !== void 0) {
-        target.userinfo = relative.userinfo;
-        target.host = relative.host;
-        target.port = relative.port;
-        target.path = removeDotSegments(relative.path || "");
-        target.query = relative.query;
+      if (relative2.userinfo !== void 0 || relative2.host !== void 0 || relative2.port !== void 0) {
+        target.userinfo = relative2.userinfo;
+        target.host = relative2.host;
+        target.port = relative2.port;
+        target.path = removeDotSegments(relative2.path || "");
+        target.query = relative2.query;
       } else {
-        if (!relative.path) {
+        if (!relative2.path) {
           target.path = base.path;
-          if (relative.query !== void 0) {
-            target.query = relative.query;
+          if (relative2.query !== void 0) {
+            target.query = relative2.query;
           } else {
             target.query = base.query;
           }
         } else {
-          if (relative.path[0] === "/") {
-            target.path = removeDotSegments(relative.path);
+          if (relative2.path[0] === "/") {
+            target.path = removeDotSegments(relative2.path);
           } else {
             if ((base.userinfo !== void 0 || base.host !== void 0 || base.port !== void 0) && !base.path) {
-              target.path = "/" + relative.path;
+              target.path = "/" + relative2.path;
             } else if (!base.path) {
-              target.path = relative.path;
+              target.path = relative2.path;
             } else {
-              target.path = base.path.slice(0, base.path.lastIndexOf("/") + 1) + relative.path;
+              target.path = base.path.slice(0, base.path.lastIndexOf("/") + 1) + relative2.path;
             }
             target.path = removeDotSegments(target.path);
           }
-          target.query = relative.query;
+          target.query = relative2.query;
         }
         target.userinfo = base.userinfo;
         target.host = base.host;
@@ -26886,7 +26960,7 @@ function requireFastUri() {
       }
       target.scheme = base.scheme;
     }
-    target.fragment = relative.fragment;
+    target.fragment = relative2.fragment;
     return target;
   }
   function equal2(uriA, uriB, options) {
@@ -32269,6 +32343,121 @@ function registerSearchTool(server, getLibraryOperations, getConfig) {
     }
   );
 }
+function toPosixPath(p) {
+  return p.split(path__default.sep).join("/");
+}
+function formatAuthor(author) {
+  if (author.literal) return author.literal;
+  const family = author.family || "";
+  const givenInitial = author.given ? `${author.given.charAt(0)}.` : "";
+  return givenInitial ? `${family}, ${givenInitial}` : family;
+}
+function resolveFulltextAndAttachments(item, attachmentsDirectory) {
+  const attachments = item.custom?.attachments;
+  if (!attachments) {
+    return {
+      fulltext: { pdf: null, markdown: null },
+      attachments: []
+    };
+  }
+  const dir = path__default.join(attachmentsDirectory, attachments.directory);
+  const files = attachments.files ?? [];
+  let pdfPath = null;
+  let markdownPath = null;
+  const nonFulltext = [];
+  for (const file of files) {
+    if (file.role === "fulltext") {
+      if (file.filename.endsWith(".pdf")) {
+        pdfPath = toPosixPath(path__default.join(dir, file.filename));
+      } else if (file.filename.endsWith(".md")) {
+        markdownPath = toPosixPath(path__default.join(dir, file.filename));
+      }
+    } else {
+      nonFulltext.push({ filename: file.filename, role: file.role });
+    }
+  }
+  return {
+    fulltext: { pdf: pdfPath, markdown: markdownPath },
+    attachments: nonFulltext
+  };
+}
+function normalizeAuthors(item) {
+  return item.author && item.author.length > 0 ? item.author.map(formatAuthor) : null;
+}
+function normalizeFileInfo(item, options) {
+  if (!options?.attachmentsDirectory) {
+    return { fulltext: null, attachments: null };
+  }
+  return resolveFulltextAndAttachments(item, options.attachmentsDirectory);
+}
+function normalizeReference(item, options) {
+  const custom2 = item.custom;
+  const { fulltext: fulltext2, attachments } = normalizeFileInfo(item, options);
+  return {
+    id: item.id,
+    uuid: custom2?.uuid ?? null,
+    type: item.type,
+    title: item.title ?? null,
+    authors: normalizeAuthors(item),
+    year: item.issued?.["date-parts"]?.[0]?.[0] ?? null,
+    journal: item["container-title"] ?? null,
+    volume: item.volume ?? null,
+    issue: item.issue ?? null,
+    page: item.page ?? null,
+    doi: item.DOI ?? null,
+    pmid: item.PMID ?? null,
+    pmcid: item.PMCID ?? null,
+    url: item.URL ?? null,
+    abstract: item.abstract ?? null,
+    tags: custom2?.tags ?? null,
+    created: custom2?.created_at ?? null,
+    modified: custom2?.timestamp ?? null,
+    fulltext: fulltext2,
+    attachments,
+    raw: item
+  };
+}
+function createShowToolHandler(getLibraryOperations, getConfig) {
+  return async (args) => {
+    const libraryOps = getLibraryOperations();
+    const config2 = getConfig();
+    const id2 = args.uuid ?? args.identifier;
+    const idType = args.uuid ? "uuid" : "id";
+    if (!id2) {
+      return {
+        content: [{ type: "text", text: "Error: identifier or uuid is required" }],
+        isError: true
+      };
+    }
+    const item = await libraryOps.find(id2, { idType });
+    if (!item) {
+      return {
+        content: [{ type: "text", text: `Reference not found: ${id2}` }],
+        isError: true
+      };
+    }
+    const attachmentsDir = config2.attachments?.directory;
+    const normalizeOpts = attachmentsDir ? { attachmentsDirectory: attachmentsDir } : void 0;
+    const normalized = normalizeReference(item, normalizeOpts);
+    return {
+      content: [{ type: "text", text: JSON.stringify(normalized, null, 2) }]
+    };
+  };
+}
+function registerShowTool(server, getLibraryOperations, getConfig) {
+  const handler = createShowToolHandler(getLibraryOperations, getConfig);
+  server.registerTool(
+    "show",
+    {
+      description: "Show detailed information about a single reference. Returns normalized JSON with all metadata, fulltext paths, and attachments. Use identifier (citation key) or uuid to look up.",
+      inputSchema: {
+        identifier: z.string().optional().describe("Reference citation key (e.g., Smith2020)"),
+        uuid: z.string().optional().describe("Reference UUID (alternative to identifier)")
+      }
+    },
+    async (args) => handler(args)
+  );
+}
 function registerAllTools(server, getLibraryOperations, getConfig) {
   registerSearchTool(server, getLibraryOperations, getConfig);
   registerListTool(server, getLibraryOperations, getConfig);
@@ -32276,6 +32465,7 @@ function registerAllTools(server, getLibraryOperations, getConfig) {
   registerCheckTool(server, getLibraryOperations);
   registerAddTool(server, getLibraryOperations);
   registerRemoveTool(server, getLibraryOperations);
+  registerShowTool(server, getLibraryOperations, getConfig);
   registerFulltextAttachTool(server, getLibraryOperations, getConfig);
   registerFulltextGetTool(server, getLibraryOperations, getConfig);
   registerFulltextDetachTool(server, getLibraryOperations, getConfig);
@@ -32335,7 +32525,7 @@ async function mcpStart(options) {
 async function executeRemove(options, context) {
   const { identifier, idType = "id", fulltextDirectory, deleteFulltext = false } = options;
   if (context.mode === "local" && deleteFulltext && fulltextDirectory) {
-    const { removeReference } = await import("./index-C_mW5LMY.js").then((n) => n.A);
+    const { removeReference } = await import("./index-B4-i4PrU.js").then((n) => n.A);
     return removeReference(context.library, {
       identifier,
       idType,
@@ -32390,7 +32580,7 @@ Continue?`;
 }
 async function executeInteractiveRemove(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferenceItemsOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferenceItemsOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const selectedItems = await withAlternateScreen2(
     () => selectReferenceItemsOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -32615,7 +32805,7 @@ async function executeInteractiveSearch(options, context, config2) {
   validateInteractiveOptions(options);
   const { checkTTY } = await import("./tty-BMyaEOhX.js");
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { runSearchFlow } = await import("./index-CA9y5wSm.js");
+  const { runSearchFlow } = await import("./index-BuQm8A5F.js");
   const { search } = await import("./file-watcher-CWHg1yol.js").then((n) => n.B);
   const { tokenize } = await import("./file-watcher-CWHg1yol.js").then((n) => n.A);
   checkTTY();
@@ -32634,7 +32824,7 @@ async function executeInteractiveSearch(options, context, config2) {
     })
   );
   if (result.selectedItems && !result.cancelled) {
-    const { isSideEffectAction } = await import("./action-menu-DCZcb0HB.js");
+    const { isSideEffectAction } = await import("./action-menu-DLEwSKrj.js");
     if (isSideEffectAction(result.action)) {
       await executeSideEffectAction(result.action, result.selectedItems, context, config2);
       return { output: "", cancelled: false, action: result.action };
@@ -32836,6 +33026,142 @@ async function serverStatus(portfilePath) {
   }
   return result;
 }
+const LABEL_WIDTH = 11;
+function label(name) {
+  return `  ${name.padEnd(LABEL_WIDTH)}`;
+}
+function formatJournalLine(ref2) {
+  let line = ref2.journal ?? "";
+  if (ref2.volume) {
+    line += ref2.issue ? `, ${ref2.volume}(${ref2.issue})` : `, ${ref2.volume}`;
+  }
+  if (ref2.page) {
+    line += `, ${ref2.page}`;
+  }
+  return line;
+}
+function formatDate(iso) {
+  return iso.slice(0, 10);
+}
+function formatFulltext(lines, ref2) {
+  if (!ref2.fulltext) return;
+  if (!ref2.fulltext.pdf && !ref2.fulltext.markdown) {
+    lines.push(`${label("Fulltext:")}-`);
+    return;
+  }
+  lines.push(`${label("Fulltext:")}`);
+  lines.push(`    pdf:      ${ref2.fulltext.pdf ?? "-"}`);
+  lines.push(`    markdown: ${ref2.fulltext.markdown ?? "-"}`);
+}
+function formatAttachments(lines, ref2) {
+  if (!ref2.attachments || ref2.attachments.length === 0) return;
+  const roles = /* @__PURE__ */ new Map();
+  for (const a of ref2.attachments) {
+    roles.set(a.role, (roles.get(a.role) ?? 0) + 1);
+  }
+  const parts = [...roles.entries()].map(([role, count]) => `${role} (${count} files)`);
+  lines.push(`${label("Files:")}${parts.join(", ")}`);
+}
+function formatAbstract(lines, ref2) {
+  if (!ref2.abstract) return;
+  lines.push("");
+  lines.push(`${label("Abstract:")}`);
+  for (const line of ref2.abstract.split("\n")) {
+    lines.push(`    ${line}`);
+  }
+}
+function formatShowPretty(ref2) {
+  const lines = [];
+  const header = ref2.title ? `[${ref2.id}] ${ref2.title}` : `[${ref2.id}]`;
+  lines.push(header);
+  lines.push(`${label("Type:")}${ref2.type}`);
+  if (ref2.authors) {
+    lines.push(`${label("Authors:")}${ref2.authors.join("; ")}`);
+  }
+  if (ref2.year != null) {
+    lines.push(`${label("Year:")}${ref2.year}`);
+  }
+  if (ref2.journal) {
+    lines.push(`${label("Journal:")}${formatJournalLine(ref2)}`);
+  }
+  if (ref2.doi) lines.push(`${label("DOI:")}${ref2.doi}`);
+  if (ref2.pmid) lines.push(`${label("PMID:")}${ref2.pmid}`);
+  if (ref2.pmcid) lines.push(`${label("PMCID:")}${ref2.pmcid}`);
+  if (ref2.url) lines.push(`${label("URL:")}${ref2.url}`);
+  lines.push(`${label("UUID:")}${ref2.uuid ?? "(no uuid)"}`);
+  if (ref2.tags && ref2.tags.length > 0) {
+    lines.push(`${label("Tags:")}${ref2.tags.join(", ")}`);
+  }
+  if (ref2.created) lines.push(`${label("Added:")}${formatDate(ref2.created)}`);
+  if (ref2.modified) lines.push(`${label("Modified:")}${formatDate(ref2.modified)}`);
+  formatFulltext(lines, ref2);
+  formatAttachments(lines, ref2);
+  formatAbstract(lines, ref2);
+  return lines.join("\n");
+}
+async function executeShow(identifier, options, context) {
+  const idType = options.uuid ? "uuid" : "id";
+  return context.library.find(identifier, { idType });
+}
+function formatShowOutput(item, options, attachmentsDirectory) {
+  const format2 = options.json ? "json" : options.output ?? "pretty";
+  const normalizeOpts = attachmentsDirectory ? { attachmentsDirectory } : void 0;
+  if (format2 === "json") {
+    const normalized2 = normalizeReference(item, normalizeOpts);
+    return JSON.stringify(normalized2, null, 2);
+  }
+  if (format2 === "yaml") {
+    const normalized2 = normalizeReference(item, normalizeOpts);
+    return stringify(normalized2);
+  }
+  if (format2 === "bibtex") {
+    return formatBibtex([item]);
+  }
+  const normalized = normalizeReference(item, normalizeOpts);
+  return formatShowPretty(normalized);
+}
+async function executeInteractiveSelect$1(context, config2) {
+  const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
+  const allReferences = await context.library.getAll();
+  const identifiers = await withAlternateScreen2(
+    () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
+  );
+  return identifiers[0] ?? "";
+}
+async function handleShowAction(identifier, options, globalOpts) {
+  try {
+    const config2 = await loadConfigWithOverrides({ ...globalOpts, ...options });
+    const context = await createExecutionContext(config2, Library.load);
+    let resolvedIdentifier;
+    if (identifier) {
+      resolvedIdentifier = identifier;
+    } else if (isTTY()) {
+      resolvedIdentifier = await executeInteractiveSelect$1(context, config2);
+    } else {
+      const stdinId = await readIdentifierFromStdin();
+      if (!stdinId) {
+        exitWithError("Identifier required (non-interactive mode)");
+        return;
+      }
+      resolvedIdentifier = stdinId;
+    }
+    const item = await executeShow(resolvedIdentifier, options, context);
+    if (!item) {
+      exitWithError(`Reference not found: ${resolvedIdentifier}`);
+      return;
+    }
+    const output = formatShowOutput(item, options, config2.attachments.directory);
+    if (output) {
+      await writeOutputWithClipboard(output, false, config2.logLevel === "silent");
+    }
+    setExitCode(ExitCode.SUCCESS);
+  } catch (error) {
+    process.stderr.write(`Error: ${error instanceof Error ? error.message : String(error)}
+`);
+    setExitCode(ExitCode.INTERNAL_ERROR);
+  }
+}
 function parseSetOption(input) {
   const match = input.match(/^([a-zA-Z][a-zA-Z0-9_.]*)([\+\-]?=)(.*)$/);
   if (!match) {
@@ -33045,7 +33371,7 @@ function formatUpdateOutput(result, identifier) {
 }
 async function executeInteractiveUpdate(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -33340,7 +33666,7 @@ function getUrlExitCode(result) {
 }
 async function executeInteractiveSelect(context, config2) {
   const { withAlternateScreen: withAlternateScreen2 } = await Promise.resolve().then(() => alternateScreen);
-  const { selectReferencesOrExit } = await import("./reference-select-Bm-05R0u.js");
+  const { selectReferencesOrExit } = await import("./reference-select-B9b9Ez7Q.js");
   const allReferences = await context.library.getAll();
   const identifiers = await withAlternateScreen2(
     () => selectReferencesOrExit(allReferences, { multiSelect: false }, config2.cli.tui)
@@ -33774,6 +34100,7 @@ function createProgram() {
     }
   });
   registerListCommand(program);
+  registerShowCommand(program);
   registerSearchCommand(program);
   registerExportCommand(program);
   registerAddCommand(program);
@@ -33787,6 +34114,7 @@ function createProgram() {
   registerAttachCommand(program);
   registerMcpCommand(program);
   registerUrlCommand(program);
+  registerInstallCommand(program);
   registerConfigCommand(program);
   registerCompletionCommand(program);
   return program;
@@ -33815,6 +34143,12 @@ function registerListCommand(program) {
     await handleListAction(options, program);
   });
 }
+function registerShowCommand(program) {
+  program.command("show [identifier]").description("Show detailed information about a single reference").option("--uuid", "Interpret identifier as UUID").option("-o, --output <format>", "Output format: pretty (default), json, yaml, bibtex").option("--json", "Alias for --output json").action(async (identifier, options) => {
+    const globalOpts = program.opts();
+    await handleShowAction(identifier, options, globalOpts);
+  });
+}
 async function handleExportAction(ids, options, program) {
   try {
     const globalOpts = program.opts();
@@ -33945,7 +34279,7 @@ function shouldAutoFetch(cliFlag, configEnabled) {
   return configEnabled;
 }
 async function performAutoFetch(addedItems, context, config2) {
-  const { fulltextFetch: fulltextFetch2 } = await import("./index-C_mW5LMY.js").then((n) => n.z);
+  const { fulltextFetch: fulltextFetch2 } = await import("./index-B4-i4PrU.js").then((n) => n.z);
   const fetchResults = await autoFetchFulltext(addedItems, context, {
     fulltextConfig: config2.fulltext,
     fulltextDirectory: config2.attachments.directory,
@@ -34211,6 +34545,25 @@ function registerUrlCommand(program) {
     await handleUrlAction(identifiers.length > 0 ? identifiers : void 0, options, globalOpts);
   });
 }
+function registerInstallCommand(program) {
+  const installCmd = program.command("install").description("Install tools and integrations");
+  installCmd.command("skills").description("Install Agent Skills (SKILL.md) for AI coding agents").option("-f, --force", "Overwrite existing files").option("-u, --user", "Install to user-level directory (~/.agents/skills/)").action(async (options) => {
+    try {
+      const result = await executeInstallSkills({
+        force: options.force ?? false,
+        ...options.user != null && { user: options.user }
+      });
+      const output = formatInstallSkillsOutput(result);
+      process.stdout.write(`${output}
+`);
+      setExitCode(ExitCode.SUCCESS);
+    } catch (error) {
+      process.stderr.write(`Error: ${error instanceof Error ? error.message : String(error)}
+`);
+      setExitCode(ExitCode.INTERNAL_ERROR);
+    }
+  });
+}
 async function main(argv) {
   const program = createProgram();
   if (process.env.COMP_LINE) {
@@ -34240,4 +34593,4 @@ export {
   restoreStdinAfterInk as r,
   syncAttachments as s
 };
-//# sourceMappingURL=index-4w0pu_0o.js.map
+//# sourceMappingURL=index-CmkN2-2A.js.map