@ncukondo/reference-manager 0.3.0 → 0.5.0

package/dist/features/operations/operations-library.d.ts

@@ -0,0 +1,36 @@
+/**
+ * OperationsLibrary class
+ *
+ * Wraps an ILibrary instance and provides ILibraryOperations interface.
+ * Delegates ILibrary methods to the underlying library and implements
+ * high-level operations (search, list, cite, import) using operation functions.
+ *
+ * See: spec/decisions/ADR-009-ilibrary-operations-pattern.md
+ */
+import type { CslItem } from "../../core/csl-json/types.js";
+import type { FindOptions, ILibrary, RemoveResult, UpdateOptions, UpdateResult } from "../../core/library-interface.js";
+import type { CiteOperationOptions, CiteResult } from "./cite.js";
+import type { ILibraryOperations, ImportOptions, ImportResult } from "./library-operations.js";
+import type { ListOptions, ListResult } from "./list.js";
+import type { SearchOperationOptions, SearchResult } from "./search.js";
+/**
+ * OperationsLibrary wraps an ILibrary and implements ILibraryOperations
+ *
+ * This allows CLI commands to use a single interface without branching
+ * between local (Library) and server (ServerClient) modes.
+ */
+export declare class OperationsLibrary implements ILibraryOperations {
+    private readonly library;
+    constructor(library: ILibrary);
+    find(identifier: string, options?: FindOptions): Promise<CslItem | undefined>;
+    getAll(): Promise<CslItem[]>;
+    add(item: CslItem): Promise<CslItem>;
+    update(idOrUuid: string, updates: Partial<CslItem>, options?: UpdateOptions): Promise<UpdateResult>;
+    remove(identifier: string, options?: FindOptions): Promise<RemoveResult>;
+    save(): Promise<void>;
+    search(options: SearchOperationOptions): Promise<SearchResult>;
+    list(options?: ListOptions): Promise<ListResult>;
+    cite(options: CiteOperationOptions): Promise<CiteResult>;
+    import(inputs: string[], options?: ImportOptions): Promise<ImportResult>;
+}
+//# sourceMappingURL=operations-library.d.ts.map

package/dist/features/operations/operations-library.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"operations-library.d.ts","sourceRoot":"","sources":["../../../src/features/operations/operations-library.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAC5D,OAAO,KAAK,EACV,WAAW,EACX,QAAQ,EACR,YAAY,EACZ,aAAa,EACb,YAAY,EACb,MAAM,iCAAiC,CAAC;AACzC,OAAO,KAAK,EAAE,oBAAoB,EAAE,UAAU,EAAE,MAAM,WAAW,CAAC;AAClE,OAAO,KAAK,EAAE,kBAAkB,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,yBAAyB,CAAC;AAC/F,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,WAAW,CAAC;AACzD,OAAO,KAAK,EAAE,sBAAsB,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAExE;;;;;GAKG;AACH,qBAAa,iBAAkB,YAAW,kBAAkB;IAC9C,OAAO,CAAC,QAAQ,CAAC,OAAO;gBAAP,OAAO,EAAE,QAAQ;IAI9C,IAAI,CAAC,UAAU,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,OAAO,GAAG,SAAS,CAAC;IAI7E,MAAM,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC;IAI5B,GAAG,CAAC,IAAI,EAAE,OAAO,GAAG,OAAO,CAAC,OAAO,CAAC;IAIpC,MAAM,CACJ,QAAQ,EAAE,MAAM,EAChB,OAAO,EAAE,OAAO,CAAC,OAAO,CAAC,EACzB,OAAO,CAAC,EAAE,aAAa,GACtB,OAAO,CAAC,YAAY,CAAC;IAIxB,MAAM,CAAC,UAAU,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,YAAY,CAAC;IAIxE,IAAI,IAAI,OAAO,CAAC,IAAI,CAAC;IAMf,MAAM,CAAC,OAAO,EAAE,sBAAsB,GAAG,OAAO,CAAC,YAAY,CAAC;IAK9D,IAAI,CAAC,OAAO,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC;IAKhD,IAAI,CAAC,OAAO,EAAE,oBAAoB,GAAG,OAAO,CAAC,UAAU,CAAC;IAKxD,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,OAAO,CAAC,EAAE,aAAa,GAAG,OAAO,CAAC,YAAY,CAAC;CAI/E"}

package/dist/features/operations/remove.d.ts

@@ -1,5 +1,5 @@
 import type { CslItem } from "../../core/csl-json/types.js";
-import type { Library } from "../../core/library.js";
+import type { ILibrary } from "../../core/library-interface.js";
 /**
  * Options for removeReference operation
  */
@@ -15,8 +15,8 @@ export interface RemoveOperationOptions {
 export interface RemoveResult {
     /** Whether the reference was removed */
     removed: boolean;
-    /** The removed item (if found) */
-    item?: CslItem;
+    /** The removed item (if found and removal succeeded) */
+    removedItem?: CslItem;
 }
 /**
  * Remove a reference from the library.
@@ -25,5 +25,5 @@ export interface RemoveResult {
  * @param options - Remove options including identifier and lookup method
  * @returns Result indicating success and the removed item
  */
-export declare function removeReference(library: Library, options: RemoveOperationOptions): Promise<RemoveResult>;
+export declare function removeReference(library: ILibrary, options: RemoveOperationOptions): Promise<RemoveResult>;
 //# sourceMappingURL=remove.d.ts.map

package/dist/features/operations/remove.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"remove.d.ts","sourceRoot":"","sources":["../../../src/features/operations/remove.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAC5D,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAErD;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,2BAA2B;IAC3B,UAAU,EAAE,MAAM,CAAC;IACnB,+EAA+E;IAC/E,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,wCAAwC;IACxC,OAAO,EAAE,OAAO,CAAC;IACjB,kCAAkC;IAClC,IAAI,CAAC,EAAE,OAAO,CAAC;CAChB;AAED;;;;;;GAMG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,OAAO,EAChB,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,YAAY,CAAC,CAqBvB"}
+{"version":3,"file":"remove.d.ts","sourceRoot":"","sources":["../../../src/features/operations/remove.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAC5D,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,iCAAiC,CAAC;AAEhE;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,2BAA2B;IAC3B,UAAU,EAAE,MAAM,CAAC;IACnB,+EAA+E;IAC/E,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,wCAAwC;IACxC,OAAO,EAAE,OAAO,CAAC;IACjB,wDAAwD;IACxD,WAAW,CAAC,EAAE,OAAO,CAAC;CACvB;AAED;;;;;;GAMG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,QAAQ,EACjB,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,YAAY,CAAC,CAUvB"}

package/dist/features/operations/search.d.ts

@@ -1,4 +1,4 @@
-import type { Library } from "../../core/library.js";
+import type { ILibrary } from "../../core/library-interface.js";
 /**
  * Output format options for search operation
  */
@@ -26,5 +26,5 @@ export interface SearchResult {
  * @param options - Search query and formatting options
  * @returns Formatted strings for each matching reference
  */
-export declare function searchReferences(library: Library, options: SearchOperationOptions): SearchResult;
+export declare function searchReferences(library: ILibrary, options: SearchOperationOptions): Promise<SearchResult>;
 //# sourceMappingURL=search.d.ts.map

package/dist/features/operations/search.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../../src/features/operations/search.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAMrD;;GAEG;AACH,MAAM,MAAM,YAAY,GAAG,QAAQ,GAAG,MAAM,GAAG,QAAQ,GAAG,UAAU,GAAG,MAAM,CAAC;AAE9E;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,0BAA0B;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,wCAAwC;IACxC,MAAM,CAAC,EAAE,YAAY,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,oDAAoD;IACpD,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED;;;;;;GAMG;AACH,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,sBAAsB,GAAG,YAAY,CA2ChG"}
+{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../../src/features/operations/search.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,iCAAiC,CAAC;AAMhE;;GAEG;AACH,MAAM,MAAM,YAAY,GAAG,QAAQ,GAAG,MAAM,GAAG,QAAQ,GAAG,UAAU,GAAG,MAAM,CAAC;AAE9E;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,0BAA0B;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,wCAAwC;IACxC,MAAM,CAAC,EAAE,YAAY,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,oDAAoD;IACpD,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED;;;;;;GAMG;AACH,wBAAsB,gBAAgB,CACpC,OAAO,EAAE,QAAQ,EACjB,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,YAAY,CAAC,CA0CvB"}

package/dist/features/operations/update.d.ts

@@ -1,5 +1,5 @@
 import type { CslItem } from "../../core/csl-json/types.js";
-import type { Library } from "../../core/library.js";
+import type { ILibrary } from "../../core/library-interface.js";
 /**
  * Options for updateReference operation
  */
@@ -35,5 +35,5 @@ export interface UpdateOperationResult {
  * @param options - Update options including identifier, updates, and collision handling
  * @returns Result indicating success and the updated item
  */
-export declare function updateReference(library: Library, options: UpdateOperationOptions): Promise<UpdateOperationResult>;
+export declare function updateReference(library: ILibrary, options: UpdateOperationOptions): Promise<UpdateOperationResult>;
 //# sourceMappingURL=update.d.ts.map

package/dist/features/operations/update.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"update.d.ts","sourceRoot":"","sources":["../../../src/features/operations/update.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAC5D,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAErD;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,2BAA2B;IAC3B,UAAU,EAAE,MAAM,CAAC;IACnB,+EAA+E;IAC/E,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,gDAAgD;IAChD,OAAO,EAAE,OAAO,CAAC,OAAO,CAAC,CAAC;IAC1B,+DAA+D;IAC/D,aAAa,CAAC,EAAE,MAAM,GAAG,QAAQ,CAAC;CACnC;AAED;;GAEG;AACH,MAAM,WAAW,qBAAqB;IACpC,wCAAwC;IACxC,OAAO,EAAE,OAAO,CAAC;IACjB,uCAAuC;IACvC,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,uFAAuF;IACvF,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB,6DAA6D;IAC7D,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,uEAAuE;IACvE,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED;;;;;;GAMG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,OAAO,EAChB,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,qBAAqB,CAAC,CAqChC"}
+{"version":3,"file":"update.d.ts","sourceRoot":"","sources":["../../../src/features/operations/update.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAC5D,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,iCAAiC,CAAC;AAEhE;;GAEG;AACH,MAAM,WAAW,sBAAsB;IACrC,2BAA2B;IAC3B,UAAU,EAAE,MAAM,CAAC;IACnB,+EAA+E;IAC/E,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,gDAAgD;IAChD,OAAO,EAAE,OAAO,CAAC,OAAO,CAAC,CAAC;IAC1B,+DAA+D;IAC/D,aAAa,CAAC,EAAE,MAAM,GAAG,QAAQ,CAAC;CACnC;AAED;;GAEG;AACH,MAAM,WAAW,qBAAqB;IACpC,wCAAwC;IACxC,OAAO,EAAE,OAAO,CAAC;IACjB,uCAAuC;IACvC,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,uFAAuF;IACvF,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB,6DAA6D;IAC7D,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,uEAAuE;IACvE,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED;;;;;;GAMG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,QAAQ,EACjB,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,qBAAqB,CAAC,CA8BhC"}

package/dist/features/search/matcher.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"matcher.d.ts","sourceRoot":"","sources":["../../../src/features/search/matcher.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAE5D,OAAO,KAAK,EAAE,UAAU,EAAiB,YAAY,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AAuRvF;;;GAGG;AACH,wBAAgB,UAAU,CAAC,KAAK,EAAE,WAAW,EAAE,SAAS,EAAE,OAAO,GAAG,UAAU,EAAE,CAQ/E;AAED;;;GAGG;AACH,wBAAgB,cAAc,CAAC,SAAS,EAAE,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,YAAY,GAAG,IAAI,CA4C7F;AAED;;;GAGG;AACH,wBAAgB,MAAM,CAAC,UAAU,EAAE,OAAO,EAAE,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,YAAY,EAAE,CAWnF"}
+{"version":3,"file":"matcher.d.ts","sourceRoot":"","sources":["../../../src/features/search/matcher.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAE5D,OAAO,KAAK,EAAE,UAAU,EAAiB,YAAY,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AAqUvF;;;GAGG;AACH,wBAAgB,UAAU,CAAC,KAAK,EAAE,WAAW,EAAE,SAAS,EAAE,OAAO,GAAG,UAAU,EAAE,CAQ/E;AAED;;;GAGG;AACH,wBAAgB,cAAc,CAAC,SAAS,EAAE,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,YAAY,GAAG,IAAI,CA4C7F;AAED;;;GAGG;AACH,wBAAgB,MAAM,CAAC,UAAU,EAAE,OAAO,EAAE,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,YAAY,EAAE,CAWnF"}

package/dist/features/search/normalizer.d.ts

@@ -9,4 +9,16 @@
  * 5. Whitespace normalization
  */
 export declare function normalize(text: string): string;
+/**
+ * Normalize text for matching while preserving case
+ *
+ * Applies the following transformations:
+ * 1. Unicode NFKC normalization
+ * 2. Remove diacritics (accents)
+ * 3. Normalize whitespace
+ *
+ * Unlike `normalize`, this function preserves letter case
+ * for use with uppercase-sensitive matching.
+ */
+export declare function normalizePreservingCase(text: string): string;
 //# sourceMappingURL=normalizer.d.ts.map

package/dist/features/search/normalizer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"normalizer.d.ts","sourceRoot":"","sources":["../../../src/features/search/normalizer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAsB9C"}
+{"version":3,"file":"normalizer.d.ts","sourceRoot":"","sources":["../../../src/features/search/normalizer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAsB9C;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,uBAAuB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAc5D"}

package/dist/features/search/tokenizer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tokenizer.d.ts","sourceRoot":"","sources":["../../../src/features/search/tokenizer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAkB,WAAW,EAAe,MAAM,YAAY,CAAC;AA2B3E;;GAEG;AACH,wBAAgB,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,WAAW,CAuBnD"}
+{"version":3,"file":"tokenizer.d.ts","sourceRoot":"","sources":["../../../src/features/search/tokenizer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAkB,WAAW,EAAe,MAAM,YAAY,CAAC;AA4B3E;;GAEG;AACH,wBAAgB,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,WAAW,CAuBnD"}

package/dist/features/search/types.d.ts

@@ -5,7 +5,7 @@ import type { CslItem } from "../../core/csl-json/types.js";
 /**
  * Field specifier for field-specific search
  */
-export type FieldSpecifier = "author" | "title" | "year" | "doi" | "pmid" | "pmcid" | "url" | "keyword";
+export type FieldSpecifier = "author" | "title" | "year" | "doi" | "pmid" | "pmcid" | "url" | "keyword" | "tag";
 /**
  * Search token representing a parsed query element
  */

package/dist/features/search/types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/features/search/types.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAE5D;;GAEG;AACH,MAAM,MAAM,cAAc,GACtB,QAAQ,GACR,OAAO,GACP,MAAM,GACN,KAAK,GACL,MAAM,GACN,OAAO,GACP,KAAK,GACL,SAAS,CAAC;AAEd;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,mDAAmD;IACnD,GAAG,EAAE,MAAM,CAAC;IACZ,yCAAyC;IACzC,KAAK,EAAE,MAAM,CAAC;IACd,2DAA2D;IAC3D,KAAK,CAAC,EAAE,cAAc,CAAC;IACvB,2DAA2D;IAC3D,QAAQ,EAAE,OAAO,CAAC;CACnB;AAED;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,4BAA4B;IAC5B,QAAQ,EAAE,MAAM,CAAC;IACjB,oBAAoB;IACpB,MAAM,EAAE,WAAW,EAAE,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,MAAM,aAAa,GAAG,OAAO,GAAG,SAAS,GAAG,MAAM,CAAC;AAEzD;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,8BAA8B;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,4BAA4B;IAC5B,QAAQ,EAAE,aAAa,CAAC;IACxB,oBAAoB;IACpB,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,iCAAiC;IACjC,KAAK,EAAE,WAAW,CAAC;IACnB,qCAAqC;IACrC,OAAO,EAAE,UAAU,EAAE,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,iCAAiC;IACjC,SAAS,EAAE,OAAO,CAAC;IACnB,uCAAuC;IACvC,YAAY,EAAE,UAAU,EAAE,CAAC;IAC3B,iEAAiE;IACjE,eAAe,EAAE,aAAa,CAAC;IAC/B,gCAAgC;IAChC,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;GAEG;AACH,MAAM,WAAW,aAAa;IAC5B,yCAAyC;IACzC,MAAM,CAAC,EAAE,WAAW,GAAG,MAAM,GAAG,QAAQ,GAAG,OAAO,CAAC;IACnD,8BAA8B;IAC9B,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB"}
+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/features/search/types.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,8BAA8B,CAAC;AAE5D;;GAEG;AACH,MAAM,MAAM,cAAc,GACtB,QAAQ,GACR,OAAO,GACP,MAAM,GACN,KAAK,GACL,MAAM,GACN,OAAO,GACP,KAAK,GACL,SAAS,GACT,KAAK,CAAC;AAEV;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,mDAAmD;IACnD,GAAG,EAAE,MAAM,CAAC;IACZ,yCAAyC;IACzC,KAAK,EAAE,MAAM,CAAC;IACd,2DAA2D;IAC3D,KAAK,CAAC,EAAE,cAAc,CAAC;IACvB,2DAA2D;IAC3D,QAAQ,EAAE,OAAO,CAAC;CACnB;AAED;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,4BAA4B;IAC5B,QAAQ,EAAE,MAAM,CAAC;IACjB,oBAAoB;IACpB,MAAM,EAAE,WAAW,EAAE,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,MAAM,aAAa,GAAG,OAAO,GAAG,SAAS,GAAG,MAAM,CAAC;AAEzD;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,8BAA8B;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,4BAA4B;IAC5B,QAAQ,EAAE,aAAa,CAAC;IACxB,oBAAoB;IACpB,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,iCAAiC;IACjC,KAAK,EAAE,WAAW,CAAC;IACnB,qCAAqC;IACrC,OAAO,EAAE,UAAU,EAAE,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,WAAW,YAAY;IAC3B,iCAAiC;IACjC,SAAS,EAAE,OAAO,CAAC;IACnB,uCAAuC;IACvC,YAAY,EAAE,UAAU,EAAE,CAAC;IAC3B,iEAAiE;IACjE,eAAe,EAAE,aAAa,CAAC;IAC/B,gCAAgC;IAChC,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;GAEG;AACH,MAAM,WAAW,aAAa;IAC5B,yCAAyC;IACzC,MAAM,CAAC,EAAE,WAAW,GAAG,MAAM,GAAG,QAAQ,GAAG,OAAO,CAAC;IACnD,8BAA8B;IAC9B,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB"}

package/dist/features/search/uppercase.d.ts

@@ -0,0 +1,41 @@
+/**
+ * Represents a segment of consecutive uppercase letters in a string.
+ */
+export interface UppercaseSegment {
+    /** The uppercase segment text */
+    segment: string;
+    /** Start index (inclusive) */
+    start: number;
+    /** End index (exclusive) */
+    end: number;
+}
+/**
+ * Checks if the text contains 2 or more consecutive uppercase letters.
+ * Pattern: /[A-Z]{2,}/
+ *
+ * @param text - The text to check
+ * @returns true if text contains consecutive uppercase letters
+ */
+export declare function hasConsecutiveUppercase(text: string): boolean;
+/**
+ * Extracts all segments of 2 or more consecutive uppercase letters from text.
+ * Pattern: /[A-Z]{2,}/g
+ *
+ * @param text - The text to extract segments from
+ * @returns Array of uppercase segments with their positions
+ */
+export declare function extractUppercaseSegments(text: string): UppercaseSegment[];
+/**
+ * Matches a query string against a target string with case sensitivity
+ * for consecutive uppercase segments in the query.
+ *
+ * - If query contains 2+ consecutive uppercase letters (e.g., AI, RNA),
+ *   those portions must match exactly in the target.
+ * - Other portions are matched case-insensitively.
+ *
+ * @param query - The search query
+ * @param target - The target string to match against
+ * @returns true if query matches target according to the rules
+ */
+export declare function matchWithUppercaseSensitivity(query: string, target: string): boolean;
+//# sourceMappingURL=uppercase.d.ts.map

package/dist/features/search/uppercase.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"uppercase.d.ts","sourceRoot":"","sources":["../../../src/features/search/uppercase.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,MAAM,WAAW,gBAAgB;IAC/B,iCAAiC;IACjC,OAAO,EAAE,MAAM,CAAC;IAChB,8BAA8B;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,4BAA4B;IAC5B,GAAG,EAAE,MAAM,CAAC;CACb;AAED;;;;;;GAMG;AACH,wBAAgB,uBAAuB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAG7D;AAED;;;;;;GAMG;AACH,wBAAgB,wBAAwB,CAAC,IAAI,EAAE,MAAM,GAAG,gBAAgB,EAAE,CAazE;AAoDD;;;;;;;;;;;GAWG;AACH,wBAAgB,6BAA6B,CAAC,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CA6BpF"}

package/dist/index.js

@@ -1,17 +1,12 @@
-import { c as computeFileHash, a as computeHash, b as backupConfigSchema, d as configSchema, e as defaultConfig, g as getDefaultBackupDirectory, f as getDefaultCurrentDirConfigFilename, h as getDefaultLibraryPath, i as getDefaultUserConfigPath, l as loadConfig, j as logLevelSchema, n as normalizePartialConfig, p as partialConfigSchema, w as watchConfigSchema } from "./chunks/loader-mQ25o6cV.js";
-import { L, R, v, x, o, q, t, u, r, k, s, m } from "./chunks/loader-mQ25o6cV.js";
-import { C as CslLibrarySchema, n as normalize, s as search, a as sortResults, t as tokenize, d as detectDuplicate } from "./chunks/detector-DHztTaFY.js";
-import { b } from "./chunks/detector-DHztTaFY.js";
-import * as fs from "node:fs/promises";
+import { C as CslLibrarySchema, c as computeFileHash, a as computeHash, n as normalize, s as search, b as sortResults, t as tokenize, d as detectDuplicate } from "./chunks/file-watcher-B-SiUw5f.js";
+import { e, F, L, R, l, m, g, h, j, k, i, p, f, w } from "./chunks/file-watcher-B-SiUw5f.js";
 import { mkdir, readFile, copyFile, stat, unlink, readdir } from "node:fs/promises";
-import * as path from "node:path";
 import { dirname, join } from "node:path";
 import writeFileAtomicLib from "write-file-atomic";
 import { existsSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { fileURLToPath } from "node:url";
-import { EventEmitter } from "node:events";
-import chokidar from "chokidar";
+import { b as backupConfigSchema, c as configSchema, d as defaultConfig, g as getDefaultBackupDirectory, a as getDefaultCurrentDirConfigFilename, e as getDefaultLibraryPath, f as getDefaultUserConfigPath, l as loadConfig, h as logLevelSchema, n as normalizePartialConfig, p as partialConfigSchema, w as watchConfigSchema } from "./chunks/loader-DuzyKV70.js";
 function validateCslJson(data) {
   const parseResult = CslLibrarySchema.safeParse(data);
   if (!parseResult.success) {
@@ -55,7 +50,7 @@ async function resolvePackageName() {
   try {
     const currentFile = fileURLToPath(import.meta.url);
     let currentDir = dirname(currentFile);
-    for (let i = 0; i < 10; i++) {
+    for (let i2 = 0; i2 < 10; i2++) {
       const packageJsonPath = join(currentDir, "package.json");
       if (existsSync(packageJsonPath)) {
         const content = await readFile(packageJsonPath, "utf-8");
@@ -88,15 +83,15 @@ async function listBackups(libraryName) {
     return [];
   }
   const files = await readdir(backupDir);
-  const backupFiles = files.filter((f) => f.endsWith(".backup")).map((f) => join(backupDir, f));
+  const backupFiles = files.filter((f2) => f2.endsWith(".backup")).map((f2) => join(backupDir, f2));
   const filesWithStats = await Promise.all(
     backupFiles.map(async (file) => {
       const stats = await stat(file);
       return { file, mtime: stats.mtimeMs };
     })
   );
-  filesWithStats.sort((a, b2) => b2.mtime - a.mtime);
-  return filesWithStats.map((f) => f.file);
+  filesWithStats.sort((a, b) => b.mtime - a.mtime);
+  return filesWithStats.map((f2) => f2.file);
 }
 async function cleanupOldBackups(libraryName, options) {
   const maxGenerations = options?.maxGenerations ?? DEFAULT_MAX_GENERATIONS;
@@ -104,12 +99,12 @@ async function cleanupOldBackups(libraryName, options) {
   const backups = await listBackups(libraryName);
   const now = Date.now();
   const backupsToDelete = [];
-  for (let i = 0; i < backups.length; i++) {
-    const backupPath = backups[i];
+  for (let i2 = 0; i2 < backups.length; i2++) {
+    const backupPath = backups[i2];
     if (!backupPath) continue;
     const stats = await stat(backupPath);
     const age = now - stats.mtimeMs;
-    if (i >= maxGenerations || age > maxAgeMs) {
+    if (i2 >= maxGenerations || age > maxAgeMs) {
       backupsToDelete.push(backupPath);
     }
   }
@@ -159,8 +154,8 @@ function getItemUuid(item) {
 function getTimestamp(item) {
   return item.custom?.timestamp || item.custom?.created_at || "1970-01-01T00:00:00.000Z";
 }
-function deepEqual(a, b2) {
-  return JSON.stringify(a) === JSON.stringify(b2);
+function deepEqual(a, b) {
+  return JSON.stringify(a) === JSON.stringify(b);
 }
 function resolveFieldConflict(localValue, remoteValue, localTimestamp, remoteTimestamp, options) {
   if (localTimestamp > remoteTimestamp) {
@@ -372,190 +367,27 @@ const index = /* @__PURE__ */ Object.freeze(/* @__PURE__ */ Object.definePropert
   __proto__: null,
   threeWayMerge
 }, Symbol.toStringTag, { value: "Module" }));
-const DEFAULT_DEBOUNCE_MS = 500;
-const DEFAULT_POLL_INTERVAL_MS = 5e3;
-const DEFAULT_RETRY_DELAY_MS = 200;
-const DEFAULT_MAX_RETRIES = 10;
-function shouldIgnore(filePath) {
-  const basename = path.basename(filePath);
-  if (basename.endsWith(".tmp")) return true;
-  if (basename.endsWith(".bak")) return true;
-  if (basename.includes(".conflict.")) return true;
-  if (basename.endsWith(".lock")) return true;
-  if (basename.startsWith(".") && basename.endsWith(".swp")) return true;
-  if (basename.endsWith("~")) return true;
-  return false;
-}
-class FileWatcher extends EventEmitter {
-  watchPath;
-  debounceMs;
-  pollIntervalMs;
-  usePolling;
-  retryDelayMs;
-  maxRetries;
-  watcher = null;
-  watching = false;
-  debounceTimers = /* @__PURE__ */ new Map();
-  constructor(watchPath, options) {
-    super();
-    this.watchPath = watchPath;
-    this.debounceMs = options?.debounceMs ?? DEFAULT_DEBOUNCE_MS;
-    this.pollIntervalMs = options?.pollIntervalMs ?? DEFAULT_POLL_INTERVAL_MS;
-    this.usePolling = options?.usePolling ?? false;
-    this.retryDelayMs = options?.retryDelayMs ?? DEFAULT_RETRY_DELAY_MS;
-    this.maxRetries = options?.maxRetries ?? DEFAULT_MAX_RETRIES;
-  }
-  /**
-   * Start watching for file changes
-   */
-  async start() {
-    if (this.watching) {
-      return;
-    }
-    return new Promise((resolve, reject) => {
-      this.watcher = chokidar.watch(this.watchPath, {
-        ignored: shouldIgnore,
-        persistent: true,
-        usePolling: this.usePolling,
-        interval: this.pollIntervalMs,
-        ignoreInitial: true,
-        awaitWriteFinish: false
-      });
-      this.watcher.on("ready", () => {
-        this.watching = true;
-        this.emit("ready");
-        resolve();
-      });
-      this.watcher.on("error", (error) => {
-        this.emit("error", error);
-        if (!this.watching) {
-          reject(error);
-        }
-      });
-      this.watcher.on("change", (filePath) => {
-        this.handleFileChange(filePath);
-      });
-      this.watcher.on("add", (filePath) => {
-        this.handleFileChange(filePath);
-      });
-    });
-  }
-  /**
-   * Handle file change with debouncing
-   */
-  handleFileChange(filePath) {
-    const existingTimer = this.debounceTimers.get(filePath);
-    if (existingTimer) {
-      clearTimeout(existingTimer);
-    }
-    const timer = setTimeout(() => {
-      this.debounceTimers.delete(filePath);
-      this.emit("change", filePath);
-      this.tryParseJsonFile(filePath);
-    }, this.debounceMs);
-    this.debounceTimers.set(filePath, timer);
-  }
-  /**
-   * Try to parse JSON file with retries
-   */
-  async tryParseJsonFile(filePath) {
-    if (path.extname(filePath).toLowerCase() !== ".json") {
-      return;
-    }
-    let lastError = null;
-    for (let attempt = 0; attempt <= this.maxRetries; attempt++) {
-      try {
-        const content = await fs.readFile(filePath, "utf-8");
-        const parsed = JSON.parse(content);
-        this.emit("parsed", filePath, parsed);
-        return;
-      } catch (error) {
-        lastError = error;
-        if (attempt < this.maxRetries) {
-          await this.delay(this.retryDelayMs);
-        }
-      }
-    }
-    this.emit("parseError", filePath, lastError);
-  }
-  /**
-   * Delay helper
-   */
-  delay(ms) {
-    return new Promise((resolve) => setTimeout(resolve, ms));
-  }
-  /**
-   * Stop watching for file changes
-   */
-  close() {
-    if (this.watcher) {
-      this.watcher.close();
-      this.watcher = null;
-    }
-    for (const timer of this.debounceTimers.values()) {
-      clearTimeout(timer);
-    }
-    this.debounceTimers.clear();
-    this.watching = false;
-  }
-  /**
-   * Get the watched path
-   */
-  getPath() {
-    return this.watchPath;
-  }
-  /**
-   * Check if the watcher is currently active
-   */
-  isWatching() {
-    return this.watching;
-  }
-  /**
-   * Get the debounce time in milliseconds
-   */
-  getDebounceMs() {
-    return this.debounceMs;
-  }
-  /**
-   * Get the poll interval in milliseconds
-   */
-  getPollIntervalMs() {
-    return this.pollIntervalMs;
-  }
-  /**
-   * Get the retry delay in milliseconds
-   */
-  getRetryDelayMs() {
-    return this.retryDelayMs;
-  }
-  /**
-   * Get the maximum number of retries
-   */
-  getMaxRetries() {
-    return this.maxRetries;
-  }
-}
 export {
   index$3 as Config,
-  b as CslItemSchema,
+  e as CslItemSchema,
   CslLibrarySchema,
   index$1 as Duplicate,
-  FileWatcher,
+  F as FileWatcher,
   L as Library,
   index as Merge,
   R as Reference,
   index$2 as Search,
   index$4 as Utils,
-  v as ensureCustomMetadata,
-  x as extractUuidFromCustom,
-  o as generateId,
-  q as generateIdWithCollisionCheck,
-  t as generateUuid,
-  u as isValidUuid,
-  r as normalizeText,
-  k as parseCslJson,
-  s as serializeCslJson,
+  l as ensureCustomMetadata,
+  m as extractUuidFromCustom,
+  g as generateId,
+  h as generateIdWithCollisionCheck,
+  j as generateUuid,
+  k as isValidUuid,
+  i as normalizeText,
+  p as parseCslJson,
+  f as serializeCslJson,
   validateCslJson,
-  m as writeCslJson
+  w as writeCslJson
 };
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sources":["../src/core/csl-json/validator.ts","../src/utils/logger.ts","../src/utils/file.ts","../src/utils/backup.ts","../src/features/merge/three-way.ts","../src/features/file-watcher/file-watcher.ts"],"sourcesContent":["import { CslItemSchema, CslLibrarySchema } from \"./types\";\nimport type { CslItem, CslLibrary } from \"./types\";\n\n/**\n * Validate CSL-JSON library structure\n * @param data - Data to validate (can be any type)\n * @returns Validated CSL-JSON library\n * @throws Error if validation fails\n */\nexport function validateCslJson(data: unknown): CslLibrary {\n  const parseResult = CslLibrarySchema.safeParse(data);\n\n  if (!parseResult.success) {\n    throw new Error(`Invalid CSL-JSON structure: ${parseResult.error.message}`);\n  }\n\n  return parseResult.data;\n}\n\n/**\n * Validate a single CSL-JSON item\n * @param data - Data to validate (can be any type)\n * @returns Validation result with valid flag and errors\n */\nexport function validateCslItem(data: unknown): {\n  valid: boolean;\n  data?: CslItem;\n  errors?: string[];\n} {\n  const parseResult = CslItemSchema.safeParse(data);\n\n  if (!parseResult.success) {\n    return {\n      valid: false,\n      errors: parseResult.error.issues.map((issue) => issue.message),\n    };\n  }\n\n  return {\n    valid: true,\n    data: parseResult.data,\n  };\n}\n","export type LogLevel = \"silent\" | \"info\" | \"debug\";\n\nexport interface Logger {\n  info(...args: unknown[]): void;\n  debug(...args: unknown[]): void;\n  error(...args: unknown[]): void;\n}\n\nexport function createLogger(level: LogLevel = \"info\"): Logger {\n  const shouldLogInfo = level === \"info\" || level === \"debug\";\n  const shouldLogDebug = level === \"debug\";\n\n  function formatMessage(...args: unknown[]): string {\n    return `${args.map((arg) => String(arg)).join(\" \")}\\n`;\n  }\n\n  return {\n    info(...args: unknown[]): void {\n      if (shouldLogInfo) {\n        process.stderr.write(formatMessage(...args));\n      }\n    },\n\n    debug(...args: unknown[]): void {\n      if (shouldLogDebug) {\n        process.stderr.write(formatMessage(...args));\n      }\n    },\n\n    error(...args: unknown[]): void {\n      process.stderr.write(formatMessage(...args));\n    },\n  };\n}\n","import { mkdir } from \"node:fs/promises\";\nimport { dirname } from \"node:path\";\nimport writeFileAtomicLib from \"write-file-atomic\";\n\n/**\n * Write file atomically with parent directory creation\n */\nexport async function writeFileAtomic(filePath: string, content: string): Promise<void> {\n  await ensureDirectoryExists(dirname(filePath));\n  await writeFileAtomicLib(filePath, content, { encoding: \"utf-8\" });\n}\n\n/**\n * Ensure directory exists, creating it recursively if necessary\n */\nexport async function ensureDirectoryExists(dirPath: string): Promise<void> {\n  await mkdir(dirPath, { recursive: true });\n}\n","import { existsSync } from \"node:fs\";\nimport { copyFile, readFile, readdir, stat, unlink } from \"node:fs/promises\";\nimport { tmpdir } from \"node:os\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { ensureDirectoryExists } from \"./file\";\n\nexport interface BackupOptions {\n  maxGenerations?: number;\n  maxAgeMs?: number;\n}\n\nconst DEFAULT_MAX_GENERATIONS = 50;\nconst DEFAULT_MAX_AGE_MS = 365 * 24 * 60 * 60 * 1000; // 1 year\n\n/**\n * Get package name from package.json\n */\nasync function resolvePackageName(): Promise<string> {\n  try {\n    const currentFile = fileURLToPath(import.meta.url);\n    let currentDir = dirname(currentFile);\n\n    for (let i = 0; i < 10; i++) {\n      const packageJsonPath = join(currentDir, \"package.json\");\n      if (existsSync(packageJsonPath)) {\n        const content = await readFile(packageJsonPath, \"utf-8\");\n        const pkg = JSON.parse(content);\n        return pkg.name;\n      }\n      currentDir = dirname(currentDir);\n    }\n  } catch {\n    // Fall back to hardcoded name if package.json is not found\n  }\n\n  return \"reference-manager\";\n}\n\nconst packageName = await resolvePackageName();\n\n/**\n * Get backup directory path for a library\n */\nexport function getBackupDirectory(libraryName: string): string {\n  const pkgName = packageName ?? \"reference-manager\";\n  return join(tmpdir(), pkgName, \"backups\", libraryName);\n}\n\n/**\n * Create a backup of the given file\n */\nexport async function createBackup(sourceFile: string, libraryName: string): Promise<string> {\n  const backupDir = getBackupDirectory(libraryName);\n  await ensureDirectoryExists(backupDir);\n\n  const timestamp = Date.now();\n  const backupFileName = `${timestamp}.backup`;\n  const backupPath = join(backupDir, backupFileName);\n\n  await copyFile(sourceFile, backupPath);\n\n  return backupPath;\n}\n\n/**\n * List all backups for a library (sorted by modification time, newest first)\n */\nexport async function listBackups(libraryName: string): Promise<string[]> {\n  const backupDir = getBackupDirectory(libraryName);\n\n  if (!existsSync(backupDir)) {\n    return [];\n  }\n\n  const files = await readdir(backupDir);\n  const backupFiles = files.filter((f) => f.endsWith(\".backup\")).map((f) => join(backupDir, f));\n\n  const filesWithStats = await Promise.all(\n    backupFiles.map(async (file) => {\n      const stats = await stat(file);\n      return { file, mtime: stats.mtimeMs };\n    })\n  );\n\n  filesWithStats.sort((a, b) => b.mtime - a.mtime);\n\n  return filesWithStats.map((f) => f.file);\n}\n\n/**\n * Clean up old backups based on generation count and age\n */\nexport async function cleanupOldBackups(\n  libraryName: string,\n  options?: BackupOptions\n): Promise<void> {\n  const maxGenerations = options?.maxGenerations ?? DEFAULT_MAX_GENERATIONS;\n  const maxAgeMs = options?.maxAgeMs ?? DEFAULT_MAX_AGE_MS;\n\n  const backups = await listBackups(libraryName);\n  const now = Date.now();\n\n  const backupsToDelete: string[] = [];\n\n  for (let i = 0; i < backups.length; i++) {\n    const backupPath = backups[i];\n    if (!backupPath) continue;\n\n    const stats = await stat(backupPath);\n    const age = now - stats.mtimeMs;\n\n    if (i >= maxGenerations || age > maxAgeMs) {\n      backupsToDelete.push(backupPath);\n    }\n  }\n\n  await Promise.all(backupsToDelete.map((backup) => unlink(backup)));\n}\n","/**\n * 3-way merge implementation with Last-Write-Wins (LWW) strategy\n */\n\nimport type { CslItem } from \"../../core/csl-json/types.js\";\nimport type {\n  FieldConflict,\n  ItemConflict,\n  MergeOptions,\n  MergeResult,\n  MergeStatus,\n} from \"./types.js\";\n\n/**\n * Get UUID from item, with fallback to id if uuid is missing\n */\nfunction getItemUuid(item: CslItem): string {\n  return item.custom?.uuid || item.id || \"unknown\";\n}\n\n/**\n * Get timestamp from item, with fallback to created_at\n */\nfunction getTimestamp(item: CslItem): string {\n  return item.custom?.timestamp || item.custom?.created_at || \"1970-01-01T00:00:00.000Z\";\n}\n\n/**\n * Deep equality check for field values\n */\nfunction deepEqual(a: unknown, b: unknown): boolean {\n  return JSON.stringify(a) === JSON.stringify(b);\n}\n\n/**\n * Resolve a field conflict using LWW or prefer option\n */\nfunction resolveFieldConflict(\n  localValue: unknown,\n  remoteValue: unknown,\n  localTimestamp: string,\n  remoteTimestamp: string,\n  options?: MergeOptions\n): unknown {\n  if (localTimestamp > remoteTimestamp) {\n    return localValue;\n  }\n  if (remoteTimestamp > localTimestamp) {\n    return remoteValue;\n  }\n  // Timestamps equal: use prefer option or default to local\n  if (options?.prefer === \"remote\") {\n    return remoteValue;\n  }\n  return localValue;\n}\n\n/**\n * Determine conflict resolution type\n */\nfunction determineResolution(\n  fieldConflicts: FieldConflict[],\n  localTimestamp: string,\n  remoteTimestamp: string,\n  options?: MergeOptions\n): ItemConflict[\"resolution\"] {\n  const hasRealConflicts = fieldConflicts.every((fc) => fc.resolved !== undefined);\n  const localIsNewer = fieldConflicts.some(\n    (fc) => fc.local !== fc.remote && localTimestamp > remoteTimestamp\n  );\n  const remoteIsNewer = fieldConflicts.some(\n    (fc) => fc.local !== fc.remote && remoteTimestamp > localTimestamp\n  );\n\n  if (hasRealConflicts && localIsNewer) return \"auto-lww\";\n  if (hasRealConflicts && remoteIsNewer) return \"auto-lww\";\n  if (options?.prefer === \"local\") return \"prefer-local\";\n  if (options?.prefer === \"remote\") return \"prefer-remote\";\n  return \"unresolved\";\n}\n\n/**\n * Merge a single field from base, local, and remote versions\n */\nfunction mergeField(\n  key: string,\n  baseValue: unknown,\n  localValue: unknown,\n  remoteValue: unknown,\n  localTimestamp: string,\n  remoteTimestamp: string,\n  options?: MergeOptions\n): { value: unknown; conflict: FieldConflict | null } {\n  const localChanged = !deepEqual(baseValue, localValue);\n  const remoteChanged = !deepEqual(baseValue, remoteValue);\n\n  if (!localChanged && !remoteChanged) {\n    return { value: baseValue, conflict: null };\n  }\n\n  if (localChanged && !remoteChanged) {\n    return { value: localValue, conflict: null };\n  }\n\n  if (!localChanged && remoteChanged) {\n    return { value: remoteValue, conflict: null };\n  }\n\n  // Both changed\n  if (deepEqual(localValue, remoteValue)) {\n    return { value: localValue, conflict: null };\n  }\n\n  // Both changed to different values\n  const resolved = resolveFieldConflict(\n    localValue,\n    remoteValue,\n    localTimestamp,\n    remoteTimestamp,\n    options\n  );\n\n  // Don't record conflicts for 'custom' metadata field\n  if (key === \"custom\") {\n    return { value: resolved, conflict: null };\n  }\n\n  return {\n    value: resolved,\n    conflict: {\n      field: key,\n      base: baseValue,\n      local: localValue,\n      remote: remoteValue,\n      resolved,\n    },\n  };\n}\n\n/**\n * Merge a single item from base, local, and remote versions\n */\nfunction mergeItem(\n  base: CslItem,\n  local: CslItem,\n  remote: CslItem,\n  options?: MergeOptions\n): { merged: CslItem; conflict: ItemConflict | null } {\n  const uuid = getItemUuid(base);\n  const localTimestamp = getTimestamp(local);\n  const remoteTimestamp = getTimestamp(remote);\n\n  const merged: CslItem = { ...base };\n  const fieldConflicts: FieldConflict[] = [];\n\n  // Get all unique keys from all three versions\n  const allKeys = new Set<string>([\n    ...Object.keys(base),\n    ...Object.keys(local),\n    ...Object.keys(remote),\n  ]);\n\n  for (const key of allKeys) {\n    const baseValue = (base as Record<string, unknown>)[key];\n    const localValue = (local as Record<string, unknown>)[key];\n    const remoteValue = (remote as Record<string, unknown>)[key];\n\n    const { value, conflict } = mergeField(\n      key,\n      baseValue,\n      localValue,\n      remoteValue,\n      localTimestamp,\n      remoteTimestamp,\n      options\n    );\n\n    (merged as Record<string, unknown>)[key] = value;\n\n    if (conflict) {\n      fieldConflicts.push(conflict);\n    }\n  }\n\n  // If there are field conflicts, create ItemConflict\n  if (fieldConflicts.length > 0) {\n    const resolution = determineResolution(\n      fieldConflicts,\n      localTimestamp,\n      remoteTimestamp,\n      options\n    );\n\n    return {\n      merged,\n      conflict: {\n        uuid,\n        id: base.id || \"unknown\",\n        fields: fieldConflicts,\n        localTimestamp,\n        remoteTimestamp,\n        resolution,\n      },\n    };\n  }\n\n  return { merged, conflict: null };\n}\n\n/**\n * Build UUID-indexed maps from item arrays\n */\nfunction buildItemMaps(base: CslItem[], local: CslItem[], remote: CslItem[]) {\n  const baseMap = new Map<string, CslItem>();\n  const localMap = new Map<string, CslItem>();\n  const remoteMap = new Map<string, CslItem>();\n\n  for (const item of base) {\n    baseMap.set(getItemUuid(item), item);\n  }\n  for (const item of local) {\n    localMap.set(getItemUuid(item), item);\n  }\n  for (const item of remote) {\n    remoteMap.set(getItemUuid(item), item);\n  }\n\n  return { baseMap, localMap, remoteMap };\n}\n\n/**\n * Handle items that exist in all three versions\n */\nfunction mergeExistingItem(\n  baseItem: CslItem,\n  localItem: CslItem,\n  remoteItem: CslItem,\n  options: MergeOptions | undefined,\n  merged: CslItem[],\n  conflicts: ItemConflict[]\n): void {\n  const { merged: mergedItem, conflict } = mergeItem(baseItem, localItem, remoteItem, options);\n  merged.push(mergedItem);\n  if (conflict) {\n    conflicts.push(conflict);\n  }\n}\n\n/**\n * Handle items added in both local and remote\n */\nfunction handleDualAddition(\n  uuid: string,\n  localItem: CslItem,\n  remoteItem: CslItem,\n  options: MergeOptions | undefined,\n  merged: CslItem[],\n  conflicts: ItemConflict[]\n): void {\n  if (deepEqual(localItem, remoteItem)) {\n    merged.push(localItem);\n  } else {\n    const syntheticBase: CslItem = {\n      id: uuid,\n      type: \"article\",\n      custom: {\n        uuid,\n        created_at: \"1970-01-01T00:00:00.000Z\",\n        timestamp: \"1970-01-01T00:00:00.000Z\",\n      },\n    };\n    const { merged: mergedItem, conflict } = mergeItem(\n      syntheticBase,\n      localItem,\n      remoteItem,\n      options\n    );\n    merged.push(mergedItem);\n    if (conflict) {\n      conflicts.push(conflict);\n    }\n  }\n}\n\n/**\n * Process a single UUID across all three versions\n */\nfunction processItem(\n  uuid: string,\n  baseMap: Map<string, CslItem>,\n  localMap: Map<string, CslItem>,\n  remoteMap: Map<string, CslItem>,\n  options: MergeOptions | undefined,\n  result: {\n    merged: CslItem[];\n    conflicts: ItemConflict[];\n    localOnly: CslItem[];\n    remoteOnly: CslItem[];\n    deletedInLocal: CslItem[];\n    deletedInRemote: CslItem[];\n  }\n): void {\n  const baseItem = baseMap.get(uuid);\n  const localItem = localMap.get(uuid);\n  const remoteItem = remoteMap.get(uuid);\n\n  if (baseItem && localItem && remoteItem) {\n    mergeExistingItem(baseItem, localItem, remoteItem, options, result.merged, result.conflicts);\n  } else if (!baseItem && localItem && remoteItem) {\n    handleDualAddition(uuid, localItem, remoteItem, options, result.merged, result.conflicts);\n  } else if (!baseItem && localItem && !remoteItem) {\n    result.merged.push(localItem);\n    result.localOnly.push(localItem);\n  } else if (!baseItem && !localItem && remoteItem) {\n    result.merged.push(remoteItem);\n    result.remoteOnly.push(remoteItem);\n  } else if (baseItem && !localItem && remoteItem) {\n    result.deletedInLocal.push(baseItem);\n  } else if (baseItem && localItem && !remoteItem) {\n    result.deletedInRemote.push(baseItem);\n  } else if (baseItem && !localItem && !remoteItem) {\n    result.deletedInLocal.push(baseItem);\n    result.deletedInRemote.push(baseItem);\n  }\n}\n\n/**\n * Performs a 3-way merge of CSL-JSON items\n *\n * @param base - Base version (common ancestor)\n * @param local - Local version (current working copy)\n * @param remote - Remote version (incoming changes)\n * @param options - Merge options (e.g., prefer local/remote for tie-breaking)\n * @returns Merge result with merged items and conflict information\n */\nexport function threeWayMerge(\n  base: CslItem[],\n  local: CslItem[],\n  remote: CslItem[],\n  options?: MergeOptions\n): MergeResult {\n  const { baseMap, localMap, remoteMap } = buildItemMaps(base, local, remote);\n\n  const result = {\n    merged: [] as CslItem[],\n    conflicts: [] as ItemConflict[],\n    localOnly: [] as CslItem[],\n    remoteOnly: [] as CslItem[],\n    deletedInLocal: [] as CslItem[],\n    deletedInRemote: [] as CslItem[],\n  };\n\n  const allUuids = new Set<string>([...baseMap.keys(), ...localMap.keys(), ...remoteMap.keys()]);\n\n  for (const uuid of allUuids) {\n    processItem(uuid, baseMap, localMap, remoteMap, options, result);\n  }\n\n  // Determine overall status\n  let status: MergeStatus = \"success\";\n  if (result.conflicts.length > 0) {\n    const hasUnresolved = result.conflicts.some((c) => c.resolution === \"unresolved\");\n    status = hasUnresolved ? \"conflict\" : \"auto-resolved\";\n  }\n\n  return {\n    status,\n    ...result,\n  };\n}\n","import { EventEmitter } from \"node:events\";\nimport * as fs from \"node:fs/promises\";\nimport * as path from \"node:path\";\nimport chokidar, { type FSWatcher } from \"chokidar\";\n\n/**\n * Options for FileWatcher\n */\nexport interface FileWatcherOptions {\n  /** Debounce time in milliseconds (default: 500) */\n  debounceMs?: number;\n  /** Poll interval in milliseconds for polling mode (default: 5000) */\n  pollIntervalMs?: number;\n  /** Use polling instead of native file system events */\n  usePolling?: boolean;\n  /** Retry delay in milliseconds for JSON parse (default: 200) */\n  retryDelayMs?: number;\n  /** Maximum number of retries for JSON parse (default: 10) */\n  maxRetries?: number;\n}\n\n// Default values from spec\nconst DEFAULT_DEBOUNCE_MS = 500;\nconst DEFAULT_POLL_INTERVAL_MS = 5000;\nconst DEFAULT_RETRY_DELAY_MS = 200;\nconst DEFAULT_MAX_RETRIES = 10;\n\n/**\n * Check if a file should be ignored based on spec patterns\n * Ignored patterns:\n * - *.tmp\n * - *.bak\n * - *.conflict.*\n * - *.lock\n * - editor swap files (.swp, ~)\n */\nfunction shouldIgnore(filePath: string): boolean {\n  const basename = path.basename(filePath);\n\n  // *.tmp files\n  if (basename.endsWith(\".tmp\")) return true;\n\n  // *.bak files\n  if (basename.endsWith(\".bak\")) return true;\n\n  // *.conflict.* files (contains .conflict. in name)\n  if (basename.includes(\".conflict.\")) return true;\n\n  // *.lock files\n  if (basename.endsWith(\".lock\")) return true;\n\n  // Vim swap files (.*.swp)\n  if (basename.startsWith(\".\") && basename.endsWith(\".swp\")) return true;\n\n  // Editor backup files (*~)\n  if (basename.endsWith(\"~\")) return true;\n\n  return false;\n}\n\n/**\n * FileWatcher watches a file or directory for changes and emits events.\n *\n * Events:\n * - 'change': Emitted when a watched file changes (after debounce)\n * - 'error': Emitted when a watch error occurs\n * - 'ready': Emitted when watching has started\n * - 'parsed': Emitted when JSON file is successfully parsed\n * - 'parseError': Emitted when JSON parse fails after all retries\n */\nexport class FileWatcher extends EventEmitter {\n  private readonly watchPath: string;\n  private readonly debounceMs: number;\n  private readonly pollIntervalMs: number;\n  private readonly usePolling: boolean;\n  private readonly retryDelayMs: number;\n  private readonly maxRetries: number;\n\n  private watcher: FSWatcher | null = null;\n  private watching = false;\n  private debounceTimers: Map<string, NodeJS.Timeout> = new Map();\n\n  constructor(watchPath: string, options?: FileWatcherOptions) {\n    super();\n    this.watchPath = watchPath;\n    this.debounceMs = options?.debounceMs ?? DEFAULT_DEBOUNCE_MS;\n    this.pollIntervalMs = options?.pollIntervalMs ?? DEFAULT_POLL_INTERVAL_MS;\n    this.usePolling = options?.usePolling ?? false;\n    this.retryDelayMs = options?.retryDelayMs ?? DEFAULT_RETRY_DELAY_MS;\n    this.maxRetries = options?.maxRetries ?? DEFAULT_MAX_RETRIES;\n  }\n\n  /**\n   * Start watching for file changes\n   */\n  async start(): Promise<void> {\n    if (this.watching) {\n      return;\n    }\n\n    return new Promise((resolve, reject) => {\n      this.watcher = chokidar.watch(this.watchPath, {\n        ignored: shouldIgnore,\n        persistent: true,\n        usePolling: this.usePolling,\n        interval: this.pollIntervalMs,\n        ignoreInitial: true,\n        awaitWriteFinish: false,\n      });\n\n      this.watcher.on(\"ready\", () => {\n        this.watching = true;\n        this.emit(\"ready\");\n        resolve();\n      });\n\n      this.watcher.on(\"error\", (error: unknown) => {\n        this.emit(\"error\", error);\n        if (!this.watching) {\n          reject(error);\n        }\n      });\n\n      this.watcher.on(\"change\", (filePath: string) => {\n        this.handleFileChange(filePath);\n      });\n\n      this.watcher.on(\"add\", (filePath: string) => {\n        this.handleFileChange(filePath);\n      });\n    });\n  }\n\n  /**\n   * Handle file change with debouncing\n   */\n  private handleFileChange(filePath: string): void {\n    // Clear existing timer for this file\n    const existingTimer = this.debounceTimers.get(filePath);\n    if (existingTimer) {\n      clearTimeout(existingTimer);\n    }\n\n    // Set new debounced timer\n    const timer = setTimeout(() => {\n      this.debounceTimers.delete(filePath);\n      this.emit(\"change\", filePath);\n      this.tryParseJsonFile(filePath);\n    }, this.debounceMs);\n\n    this.debounceTimers.set(filePath, timer);\n  }\n\n  /**\n   * Try to parse JSON file with retries\n   */\n  private async tryParseJsonFile(filePath: string): Promise<void> {\n    // Only parse .json files\n    if (path.extname(filePath).toLowerCase() !== \".json\") {\n      return;\n    }\n\n    let lastError: Error | null = null;\n\n    for (let attempt = 0; attempt <= this.maxRetries; attempt++) {\n      try {\n        const content = await fs.readFile(filePath, \"utf-8\");\n        const parsed = JSON.parse(content);\n        this.emit(\"parsed\", filePath, parsed);\n        return;\n      } catch (error) {\n        lastError = error as Error;\n        if (attempt < this.maxRetries) {\n          await this.delay(this.retryDelayMs);\n        }\n      }\n    }\n\n    this.emit(\"parseError\", filePath, lastError);\n  }\n\n  /**\n   * Delay helper\n   */\n  private delay(ms: number): Promise<void> {\n    return new Promise((resolve) => setTimeout(resolve, ms));\n  }\n\n  /**\n   * Stop watching for file changes\n   */\n  close(): void {\n    if (this.watcher) {\n      this.watcher.close();\n      this.watcher = null;\n    }\n\n    // Clear all debounce timers\n    for (const timer of this.debounceTimers.values()) {\n      clearTimeout(timer);\n    }\n    this.debounceTimers.clear();\n\n    this.watching = false;\n  }\n\n  /**\n   * Get the watched path\n   */\n  getPath(): string {\n    return this.watchPath;\n  }\n\n  /**\n   * Check if the watcher is currently active\n   */\n  isWatching(): boolean {\n    return this.watching;\n  }\n\n  /**\n   * Get the debounce time in milliseconds\n   */\n  getDebounceMs(): number {\n    return this.debounceMs;\n  }\n\n  /**\n   * Get the poll interval in milliseconds\n   */\n  getPollIntervalMs(): number {\n    return this.pollIntervalMs;\n  }\n\n  /**\n   * Get the retry delay in milliseconds\n   */\n  getRetryDelayMs(): number {\n    return this.retryDelayMs;\n  }\n\n  /**\n   * Get the maximum number of retries\n   */\n  getMaxRetries(): number {\n    return this.maxRetries;\n  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DEFAULT_MAX_AGE_MS;\n\n  const backups = await listBackups(libraryName);\n  const now = Date.now();\n\n  const backupsToDelete: string[] = [];\n\n  for (let i = 0; i < backups.length; i++) {\n    const backupPath = backups[i];\n    if (!backupPath) continue;\n\n    const stats = await stat(backupPath);\n    const age = now - stats.mtimeMs;\n\n    if (i >= maxGenerations || age > maxAgeMs) {\n      backupsToDelete.push(backupPath);\n    }\n  }\n\n  await Promise.all(backupsToDelete.map((backup) => unlink(backup)));\n}\n","/**\n * 3-way merge implementation with Last-Write-Wins (LWW) strategy\n */\n\nimport type { CslItem } from \"../../core/csl-json/types.js\";\nimport type {\n  FieldConflict,\n  ItemConflict,\n  MergeOptions,\n  MergeResult,\n  MergeStatus,\n} from \"./types.js\";\n\n/**\n * Get UUID from item, with fallback to id if uuid is missing\n */\nfunction getItemUuid(item: CslItem): string {\n  return item.custom?.uuid || item.id || \"unknown\";\n}\n\n/**\n * Get timestamp 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FieldConflict[],\n  localTimestamp: string,\n  remoteTimestamp: string,\n  options?: MergeOptions\n): ItemConflict[\"resolution\"] {\n  const hasRealConflicts = fieldConflicts.every((fc) => fc.resolved !== undefined);\n  const localIsNewer = fieldConflicts.some(\n    (fc) => fc.local !== fc.remote && localTimestamp > remoteTimestamp\n  );\n  const remoteIsNewer = fieldConflicts.some(\n    (fc) => fc.local !== fc.remote && remoteTimestamp > localTimestamp\n  );\n\n  if (hasRealConflicts && localIsNewer) return \"auto-lww\";\n  if (hasRealConflicts && remoteIsNewer) return \"auto-lww\";\n  if (options?.prefer === \"local\") return \"prefer-local\";\n  if (options?.prefer === \"remote\") return \"prefer-remote\";\n  return \"unresolved\";\n}\n\n/**\n * Merge a single field from base, local, and remote versions\n */\nfunction mergeField(\n  key: string,\n  baseValue: unknown,\n  localValue: unknown,\n  remoteValue: unknown,\n  localTimestamp: string,\n  remoteTimestamp: string,\n  options?: MergeOptions\n): { value: unknown; conflict: FieldConflict | null } {\n  const localChanged = !deepEqual(baseValue, localValue);\n  const remoteChanged = !deepEqual(baseValue, remoteValue);\n\n  if (!localChanged && !remoteChanged) {\n    return { value: baseValue, conflict: null };\n  }\n\n  if (localChanged && !remoteChanged) {\n    return { value: localValue, conflict: null };\n  }\n\n  if (!localChanged && remoteChanged) {\n    return { value: remoteValue, conflict: null };\n  }\n\n  // Both changed\n  if (deepEqual(localValue, remoteValue)) {\n    return { value: localValue, conflict: null };\n  }\n\n  // Both changed to different values\n  const resolved = resolveFieldConflict(\n    localValue,\n    remoteValue,\n    localTimestamp,\n    remoteTimestamp,\n    options\n  );\n\n  // Don't record conflicts for 'custom' metadata field\n  if (key === \"custom\") {\n    return { value: resolved, conflict: null };\n  }\n\n  return {\n    value: resolved,\n    conflict: {\n      field: key,\n      base: baseValue,\n      local: localValue,\n      remote: remoteValue,\n      resolved,\n    },\n  };\n}\n\n/**\n * Merge a single item from base, local, and remote versions\n */\nfunction mergeItem(\n  base: CslItem,\n  local: CslItem,\n  remote: CslItem,\n  options?: MergeOptions\n): { merged: CslItem; conflict: ItemConflict | null } {\n  const uuid = getItemUuid(base);\n  const localTimestamp = getTimestamp(local);\n  const remoteTimestamp = getTimestamp(remote);\n\n  const merged: CslItem = { ...base };\n  const fieldConflicts: FieldConflict[] = [];\n\n  // Get all unique keys from all three versions\n  const allKeys = new Set<string>([\n    ...Object.keys(base),\n    ...Object.keys(local),\n    ...Object.keys(remote),\n  ]);\n\n  for (const key of allKeys) {\n    const baseValue = (base as Record<string, unknown>)[key];\n    const localValue = (local as Record<string, unknown>)[key];\n    const remoteValue = (remote as Record<string, unknown>)[key];\n\n    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const localMap = new Map<string, CslItem>();\n  const remoteMap = new Map<string, CslItem>();\n\n  for (const item of base) {\n    baseMap.set(getItemUuid(item), item);\n  }\n  for (const item of local) {\n    localMap.set(getItemUuid(item), item);\n  }\n  for (const item of remote) {\n    remoteMap.set(getItemUuid(item), item);\n  }\n\n  return { baseMap, localMap, remoteMap };\n}\n\n/**\n * Handle items that exist in all three versions\n */\nfunction mergeExistingItem(\n  baseItem: CslItem,\n  localItem: CslItem,\n  remoteItem: CslItem,\n  options: MergeOptions | undefined,\n  merged: CslItem[],\n  conflicts: ItemConflict[]\n): void {\n  const { merged: mergedItem, conflict } = mergeItem(baseItem, localItem, remoteItem, options);\n  merged.push(mergedItem);\n  if (conflict) {\n    conflicts.push(conflict);\n  }\n}\n\n/**\n * Handle items added in both local and remote\n */\nfunction handleDualAddition(\n  uuid: string,\n  localItem: CslItem,\n  remoteItem: CslItem,\n  options: 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