npm - @ncukondo/reference-manager - Versions diffs - 0.26.0 → 0.27.0 - Mend

@ncukondo/reference-manager 0.26.0 → 0.27.0

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Files changed (34) hide show

package/dist/chunks/{index-tdmbNN9b.js → index-Bo1JIDmF.js} RENAMED Viewed

@@ -1,8 +1,8 @@
 import { useApp, Box, render } from "ink";
 import { useState, useEffect, createElement } from "react";
-import { getActionChoices, OUTPUT_FORMAT_CHOICES, STYLE_CHOICES, isSideEffectAction, generateOutput } from "./action-menu-DWdoHTFh.js";
-import { S as SearchableMultiSelect, t as toChoice$1, c as calculateEffectiveLimit, f as formatAuthors, a as formatIdentifiers } from "./SearchableMultiSelect-D2IzthN4.js";
-import { S as Select, r as restoreStdinAfterInk } from "./index-BEQ4YIXx.js";
+import { getActionChoices, OUTPUT_FORMAT_CHOICES, STYLE_CHOICES, isSideEffectAction, generateOutput } from "./action-menu-DP1rmCkH.js";
+import { S as SearchableMultiSelect, t as toChoice$1, c as calculateEffectiveLimit, f as formatAuthors, a as formatIdentifiers } from "./SearchableMultiSelect-D6-pj_XI.js";
+import { S as Select, r as restoreStdinAfterInk } from "./index-B8ST0WLa.js";
 function SearchFlowApp({
   choices,
   filterFn,
@@ -392,4 +392,4 @@ export {
   runCiteFlow,
   runSearchFlow
 };
-//# sourceMappingURL=index-tdmbNN9b.js.map
+//# sourceMappingURL=index-Bo1JIDmF.js.map

package/dist/chunks/{index-tdmbNN9b.js.map → index-Bo1JIDmF.js.map} RENAMED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index-tdmbNN9b.js","sources":["../../src/features/interactive/apps/SearchFlowApp.tsx","../../src/features/interactive/apps/runSearchFlow.ts","../../src/features/interactive/apps/CiteFlowApp.tsx","../../src/features/interactive/apps/runCiteFlow.ts"],"sourcesContent":["/*\n SearchFlowApp - Single App for search -t flow\n \n Manages state transitions: search → action → (style/output-format if needed)\n * Following React Ink Single App Pattern (ADR-015)\n /\n\nimport { Box, useApp } from \"ink\";\nimport type React from \"react\";\nimport { createElement, useEffect, useState } from \"react\";\nimport type { CitationKeyFormat } from \"../../../config/schema.js\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport {\n type ActionMenuResult,\n type ActionType,\n OUTPUT_FORMAT_CHOICES,\n type OutputFormatType,\n STYLE_CHOICES,\n generateOutput,\n getActionChoices,\n isSideEffectAction,\n} from \"../action-menu.js\";\nimport {\n type Choice,\n SearchableMultiSelect,\n Select,\n type SortOption,\n} from \"../components/index.js\";\n\n/\n Flow states for the search flow\n /\ntype FlowState = \"search\" \| \"action\" \| \"style\" \| \"output-format\" \| \"exiting\";\n\n/\n Props for SearchFlowApp\n /\nexport interface SearchFlowAppProps {\n /* Choices for the search prompt /\n choices: Choice<CslItem>[];\n /* Filter function for search /\n filterFn: (query: string, choices: Choice<CslItem>[]) => Choice<CslItem>[];\n /* Number of visible items /\n visibleCount: number;\n /* Default sort option /\n defaultSort: SortOption;\n /* Default citation key format /\n defaultKeyFormat: CitationKeyFormat;\n /* Default citation style /\n defaultStyle: string;\n /* Debounce delay in milliseconds for search filtering /\n debounceMs?: number;\n /* Callback when flow completes /\n onComplete: (result: ActionMenuResult) => void;\n /* Callback when flow is cancelled /\n onCancel: () => void;\n}\n\n/\n SearchFlowApp component\n \n Single App that manages search → action → style/output-format flow\n /\nexport function SearchFlowApp({\n choices,\n filterFn,\n visibleCount,\n defaultSort,\n defaultKeyFormat,\n defaultStyle,\n debounceMs,\n onComplete,\n onCancel,\n}: SearchFlowAppProps): React.ReactElement {\n const { exit } = useApp();\n const [state, setState] = useState<FlowState>(\"search\");\n const [selectedItems, setSelectedItems] = useState<CslItem[]>([]);\n const [pendingResult, setPendingResult] = useState<ActionMenuResult \| null>(null);\n\n // Exit when entering \"exiting\" state (after rendering empty component)\n useEffect(() => {\n if (state === \"exiting\" && pendingResult) {\n exit();\n if (pendingResult.cancelled) {\n onCancel();\n } else {\n onComplete(pendingResult);\n }\n }\n }, [state, pendingResult, exit, onCancel, onComplete]);\n\n // Transition to exiting state with result\n const exitWith = (result: ActionMenuResult) => {\n setPendingResult(result);\n setState(\"exiting\");\n };\n\n // Handle search submission\n const handleSearchSubmit = (selected: Choice<CslItem>[]) => {\n if (selected.length === 0) {\n exitWith({ action: \"cancel\", output: \"\", cancelled: true });\n return;\n }\n setSelectedItems(selected.map((c) => c.value));\n setState(\"action\");\n };\n\n // Handle search cancel\n const handleSearchCancel = () => {\n exitWith({ action: \"cancel\", output: \"\", cancelled: true });\n };\n\n // Handle action selection\n const handleActionSelect = (action: ActionType) => {\n if (action === \"cancel\") {\n exitWith({ action: \"cancel\", output: \"\", cancelled: true });\n return;\n }\n\n // If cite-choose, go to style selection\n if (action === \"cite-choose\") {\n setState(\"style\");\n return;\n }\n\n // If output-format, go to output format submenu\n if (action === \"output-format\") {\n setState(\"output-format\");\n return;\n }\n\n // Handle side-effect actions\n if (isSideEffectAction(action)) {\n exitWith({ action, output: \"\", cancelled: false, selectedItems });\n return;\n }\n\n // Generate output and complete\n const output = generateOutput(action, selectedItems, {\n defaultKeyFormat,\n defaultStyle,\n });\n exitWith({ action, output, cancelled: false });\n };\n\n // Handle action cancel (go back to search)\n const handleActionCancel = () => {\n setState(\"search\");\n };\n\n // Handle style selection\n const handleStyleSelect = (style: string) => {\n const output = generateOutput(\"cite-choose\", selectedItems, {\n defaultKeyFormat,\n defaultStyle: style,\n });\n exitWith({ action: \"cite-choose\", output, cancelled: false });\n };\n\n // Handle style cancel (go back to action)\n const handleStyleCancel = () => {\n setState(\"action\");\n };\n\n // Handle output format selection\n const handleOutputFormatSelect = (format: OutputFormatType) => {\n if (format === \"cancel\") {\n setState(\"action\");\n return;\n }\n\n const output = generateOutput(format, selectedItems, {\n defaultKeyFormat,\n defaultStyle,\n });\n exitWith({ action: \"output-format\", output, cancelled: false });\n };\n\n // Handle output format cancel (go back to action)\n const handleOutputFormatCancel = () => {\n setState(\"action\");\n };\n\n // Render based on current state\n if (state === \"exiting\") {\n // Empty component - Ink will clear the previous content\n return createElement(Box);\n }\n\n if (state === \"search\") {\n return createElement(SearchableMultiSelect<CslItem>, {\n choices,\n filterFn,\n visibleCount,\n onSubmit: handleSearchSubmit,\n onCancel: handleSearchCancel,\n header: \"Search references\",\n placeholder: \"Type to search...\",\n defaultSort,\n ...(debounceMs !== undefined && { debounceMs }),\n });\n }\n\n if (state === \"action\") {\n const count = selectedItems.length;\n const refWord = count === 1 ? \"reference\" : \"references\";\n return createElement(Select<ActionType>, {\n key: \"action\",\n options: getActionChoices(count, { defaultKeyFormat }),\n message: `Action for ${count} selected ${refWord}:`,\n onSelect: handleActionSelect,\n onCancel: handleActionCancel,\n });\n }\n\n if (state === \"output-format\") {\n return createElement(Select<OutputFormatType>, {\n key: \"output-format\",\n options: OUTPUT_FORMAT_CHOICES,\n message: \"Select output format:\",\n onSelect: handleOutputFormatSelect,\n onCancel: handleOutputFormatCancel,\n });\n }\n\n // state === \"style\"\n return createElement(Select<string>, {\n key: \"style\",\n options: STYLE_CHOICES,\n message: \"Select citation style:\",\n onSelect: handleStyleSelect,\n onCancel: handleStyleCancel,\n });\n}\n","/\n Runner for SearchFlowApp\n \n Provides the public API for running the search flow.\n /\n\nimport { render } from \"ink\";\nimport { createElement } from \"react\";\nimport type { CitationKeyFormat } from \"../../../config/schema.js\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport type { SearchResult } from \"../../search/types.js\";\nimport type { ActionMenuResult } from \"../action-menu.js\";\nimport { restoreStdinAfterInk } from \"../alternate-screen.js\";\nimport { toChoice } from \"../choice-builder.js\";\nimport { type Choice, type SortOption, calculateEffectiveLimit } from \"../components/index.js\";\nimport { SearchFlowApp } from \"./SearchFlowApp.js\";\n\n/\n Configuration for the search flow\n /\nexport interface SearchFlowConfig {\n /* Maximum number of results to display /\n limit: number;\n /* Debounce delay in milliseconds for search filtering /\n debounceMs: number;\n /* Default citation key format /\n defaultKeyFormat?: CitationKeyFormat;\n /* Default citation style /\n defaultStyle?: string;\n}\n\n/\n Search function type for filtering references\n /\nexport type SearchFunction = (query: string) => SearchResult[];\n\n/\n Run the search flow (search → action → style if needed)\n \n This is the main entry point for the `search -t` command.\n /\nexport async function runSearchFlow(\n allReferences: CslItem[],\n searchFn: SearchFunction,\n config: SearchFlowConfig\n): Promise<ActionMenuResult> {\n // Convert references to choices and build lookup map\n const choices = allReferences.map(toChoice);\n const choiceMap = new Map(choices.map((c) => [c.id, c]));\n\n // Calculate effective visible count\n const effectiveLimit = calculateEffectiveLimit(config.limit);\n\n // Create filter function using the provided search function\n const filterFn = (query: string, choices: Choice<CslItem>[]): Choice<CslItem>[] => {\n if (!query.trim()) return choices;\n\n const results = searchFn(query);\n return results.flatMap((r) => {\n const choice = choiceMap.get(r.reference.id);\n return choice ? [choice] : [];\n });\n };\n\n // Default sort option\n const defaultSort: SortOption = \"updated-desc\";\n\n // Create a promise to capture the result\n return new Promise<ActionMenuResult>((resolve) => {\n let flowResult: ActionMenuResult = {\n action: \"cancel\",\n output: \"\",\n cancelled: true,\n };\n\n const handleComplete = (result: ActionMenuResult): void => {\n flowResult = result;\n };\n\n const handleCancel = (): void => {\n flowResult = {\n action: \"cancel\",\n output: \"\",\n cancelled: true,\n };\n };\n\n // Render the Ink app (single render for entire flow)\n const { waitUntilExit } = render(\n createElement(SearchFlowApp, {\n choices,\n filterFn,\n visibleCount: effectiveLimit,\n defaultSort,\n defaultKeyFormat: config.defaultKeyFormat ?? \"pandoc\",\n defaultStyle: config.defaultStyle ?? \"apa\",\n debounceMs: config.debounceMs,\n onComplete: handleComplete,\n onCancel: handleCancel,\n })\n );\n\n // Wait for the app to exit, then resolve\n waitUntilExit()\n .then(() => {\n restoreStdinAfterInk();\n resolve(flowResult);\n })\n .catch(() => {\n restoreStdinAfterInk();\n resolve({\n action: \"cancel\",\n output: \"\",\n cancelled: true,\n });\n });\n });\n}\n","/\n CiteFlowApp - Single App for cite command flow\n \n Implements the Single App Pattern (ADR-015) for the cite command.\n * Manages state transitions: reference selection → style selection → exiting\n /\n\nimport { Box, useApp } from \"ink\";\nimport type React from \"react\";\nimport { createElement, useEffect, useState } from \"react\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport { SearchableMultiSelect } from \"../components/SearchableMultiSelect.js\";\nimport { Select, type SelectOption } from \"../components/Select.js\";\nimport type { Choice, SortOption } from \"../components/index.js\";\n\n// Flow states\ntype FlowState = \"search\" \| \"style\" \| \"exiting\";\n\n/\n Result from the cite flow\n /\nexport interface CiteFlowResult {\n /* Selected reference IDs /\n identifiers: string[];\n /* Selected style (if style selection was shown) /\n style?: string;\n /* Whether the flow was cancelled /\n cancelled: boolean;\n}\n\n/\n Props for CiteFlowApp\n /\nexport interface CiteFlowAppProps {\n /* All reference choices /\n choices: Choice<CslItem>[];\n /* Filter function for search /\n filterFn: (query: string, choices: Choice<CslItem>[]) => Choice<CslItem>[];\n /* Number of visible items /\n visibleCount: number;\n /* Default sort option /\n defaultSort: SortOption;\n /* Style options for style selection /\n styleOptions: SelectOption<string>[];\n /* Whether to show style selection (false if style already specified) /\n showStyleSelect: boolean;\n /* Callback when flow completes /\n onComplete: (result: CiteFlowResult) => void;\n /* Callback when flow is cancelled /\n onCancel: () => void;\n}\n\n/\n CiteFlowApp component\n \n Single Ink app that handles the entire cite flow:\n * 1. Reference selection (SearchableMultiSelect)\n * 2. Style selection (Select) - optional\n * 3. Exit\n /\nexport function CiteFlowApp({\n choices,\n filterFn,\n visibleCount,\n defaultSort,\n styleOptions,\n showStyleSelect,\n onComplete,\n onCancel,\n}: CiteFlowAppProps): React.ReactElement {\n const { exit } = useApp();\n const [state, setState] = useState<FlowState>(\"search\");\n const [selectedItems, setSelectedItems] = useState<CslItem[]>([]);\n const [pendingResult, setPendingResult] = useState<CiteFlowResult \| null>(null);\n\n // Exit when entering \"exiting\" state\n useEffect(() => {\n if (state === \"exiting\" && pendingResult) {\n exit();\n if (pendingResult.cancelled) {\n onCancel();\n } else {\n onComplete(pendingResult);\n }\n }\n }, [state, pendingResult, exit, onCancel, onComplete]);\n\n // Transition to exiting state with result\n const exitWith = (result: CiteFlowResult) => {\n setPendingResult(result);\n setState(\"exiting\");\n };\n\n // Handle search submission\n const handleSearchSubmit = (selected: Choice<CslItem>[]) => {\n if (selected.length === 0) {\n exitWith({ identifiers: [], cancelled: true });\n return;\n }\n const items = selected.map((c) => c.value);\n setSelectedItems(items);\n\n if (showStyleSelect) {\n setState(\"style\");\n } else {\n // No style selection needed, complete immediately\n exitWith({\n identifiers: items.map((item) => item.id),\n cancelled: false,\n });\n }\n };\n\n // Handle search cancel\n const handleSearchCancel = () => {\n exitWith({ identifiers: [], cancelled: true });\n };\n\n // Handle style selection\n const handleStyleSelect = (style: string) => {\n exitWith({\n identifiers: selectedItems.map((item) => item.id),\n style,\n cancelled: false,\n });\n };\n\n // Handle style cancel (go back to search)\n const handleStyleCancel = () => {\n setState(\"search\");\n };\n\n // Render based on current state\n if (state === \"exiting\") {\n return createElement(Box);\n }\n\n if (state === \"search\") {\n return createElement(SearchableMultiSelect<CslItem>, {\n choices,\n filterFn,\n visibleCount,\n onSubmit: handleSearchSubmit,\n onCancel: handleSearchCancel,\n header: \"Select references to cite\",\n placeholder: \"Type to search...\",\n defaultSort,\n });\n }\n\n // state === \"style\"\n const count = selectedItems.length;\n const refWord = count === 1 ? \"reference\" : \"references\";\n return createElement(Select<string>, {\n options: styleOptions,\n message: `Select citation style for ${count} ${refWord}:`,\n onSelect: handleStyleSelect,\n onCancel: handleStyleCancel,\n });\n}\n","/\n Runner for CiteFlowApp\n \n Provides the public API for running the cite flow.\n /\n\nimport { render } from \"ink\";\nimport { createElement } from \"react\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport type { SearchResult } from \"../../search/types.js\";\nimport { restoreStdinAfterInk } from \"../alternate-screen.js\";\nimport { formatIdentifiers } from \"../choice-builder.js\";\nimport {\n type Choice,\n type SelectOption,\n type SortOption,\n calculateEffectiveLimit,\n} from \"../components/index.js\";\nimport { formatAuthors } from \"../format.js\";\nimport { CiteFlowApp, type CiteFlowResult } from \"./CiteFlowApp.js\";\n\n/\n Configuration for the cite flow\n /\nexport interface CiteFlowConfig {\n /* Maximum number of results to display /\n limit: number;\n}\n\n/\n Search function type for filtering references\n /\nexport type SearchFunction = (query: string) => SearchResult[];\n\n/\n Extract year from CSL item\n /\nfunction extractYear(item: CslItem): number \| undefined {\n const dateParts = item.issued?.[\"date-parts\"];\n if (!dateParts \|\| dateParts.length === 0) return undefined;\n const firstDatePart = dateParts[0];\n if (!firstDatePart \|\| firstDatePart.length === 0) return undefined;\n return firstDatePart[0];\n}\n\n/\n Extract published date from CSL item\n /\nfunction extractPublishedDate(item: CslItem): Date \| undefined {\n const dateParts = item.issued?.[\"date-parts\"];\n if (!dateParts \|\| dateParts.length === 0) return undefined;\n const firstDatePart = dateParts[0];\n if (!firstDatePart \|\| firstDatePart.length === 0) return undefined;\n const [year, month = 1, day = 1] = firstDatePart;\n if (year === undefined) return undefined;\n return new Date(year, month - 1, day);\n}\n\n/\n Extract updated date from CSL item (from custom.timestamp)\n /\nfunction extractUpdatedDate(item: CslItem): Date \| undefined {\n const dateStr = item.custom?.timestamp;\n if (!dateStr \|\| typeof dateStr !== \"string\") return undefined;\n const date = new Date(dateStr);\n return Number.isNaN(date.getTime()) ? undefined : date;\n}\n\n/\n Extract created date from CSL item (from custom.created_at)\n /\nfunction extractCreatedDate(item: CslItem): Date \| undefined {\n const dateStr = item.custom?.created_at;\n if (!dateStr \|\| typeof dateStr !== \"string\") return undefined;\n const date = new Date(dateStr);\n return Number.isNaN(date.getTime()) ? undefined : date;\n}\n\n/\n Format item type for display\n /\nfunction formatType(type: string): string {\n const typeMap: Record<string, string> = {\n \"article-journal\": \"Journal article\",\n \"article-magazine\": \"Magazine article\",\n \"article-newspaper\": \"Newspaper article\",\n book: \"Book\",\n chapter: \"Book chapter\",\n \"paper-conference\": \"Conference paper\",\n thesis: \"Thesis\",\n report: \"Report\",\n webpage: \"Web page\",\n };\n return typeMap[type] ?? type;\n}\n\n/\n Convert CslItem to Choice for SearchableMultiSelect\n /\nfunction toChoice(item: CslItem): Choice<CslItem> {\n const authors = formatAuthors(item.author);\n const year = extractYear(item);\n const identifiers = formatIdentifiers(item);\n const itemType = formatType(item.type);\n\n // Build meta line: Year · Type · Identifiers\n const metaParts: string[] = [];\n if (year) metaParts.push(String(year));\n metaParts.push(itemType);\n if (identifiers) metaParts.push(identifiers);\n\n const updatedDate = extractUpdatedDate(item);\n const createdDate = extractCreatedDate(item);\n const publishedDate = extractPublishedDate(item);\n\n return {\n id: item.id,\n title: item.title ?? \"(No title)\",\n subtitle: authors \|\| \"(No authors)\",\n meta: metaParts.join(\" · \"),\n value: item,\n ...(updatedDate && { updatedDate }),\n ...(createdDate && { createdDate }),\n ...(publishedDate && { publishedDate }),\n };\n}\n\n/\n Options for running the cite flow\n /\nexport interface RunCiteFlowOptions {\n /* All references available for selection /\n allReferences: CslItem[];\n /* Search function for filtering /\n searchFn: SearchFunction;\n /* Flow configuration /\n config: CiteFlowConfig;\n /* Style options for style selection /\n styleOptions: SelectOption<string>[];\n /* Whether to show style selection /\n showStyleSelect: boolean;\n}\n\n/\n Run the cite flow (reference selection → style selection if needed)\n \n This is the main entry point for interactive cite command.\n */\nexport async function runCiteFlow(options: RunCiteFlowOptions): Promise<CiteFlowResult> {\n const { allReferences, searchFn, config, styleOptions, showStyleSelect } = options;\n\n // Convert references to choices\n const choices = allReferences.map(toChoice);\n\n // Calculate effective visible count\n const effectiveLimit = calculateEffectiveLimit(config.limit);\n\n // Create filter function using the provided search function\n const filterFn = (query: string, choices: Choice<CslItem>[]): Choice<CslItem>[] => {\n if (!query.trim()) return choices;\n\n const results = searchFn(query);\n return results.map((r) => toChoice(r.reference));\n };\n\n // Default sort option\n const defaultSort: SortOption = \"updated-desc\";\n\n // Create a promise to capture the result\n return new Promise<CiteFlowResult>((resolve) => {\n let flowResult: CiteFlowResult = {\n identifiers: [],\n cancelled: true,\n };\n\n const handleComplete = (result: CiteFlowResult): void => {\n flowResult = result;\n };\n\n const handleCancel = (): void => {\n flowResult = {\n identifiers: [],\n cancelled: true,\n };\n };\n\n // Render the Ink app (single render for entire flow)\n const { waitUntilExit } = render(\n createElement(CiteFlowApp, {\n choices,\n filterFn,\n visibleCount: effectiveLimit,\n defaultSort,\n styleOptions,\n showStyleSelect,\n onComplete: handleComplete,\n onCancel: handleCancel,\n })\n );\n\n // Wait for the app to exit, then resolve\n waitUntilExit()\n .then(() => {\n restoreStdinAfterInk();\n resolve(flowResult);\n })\n .catch(() => {\n restoreStdinAfterInk();\n resolve({\n identifiers: [],\n cancelled: true,\n });\n });\n 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1	+ {"version":3,"file":"index-Bo1JIDmF.js","sources":["../../src/features/interactive/apps/SearchFlowApp.tsx","../../src/features/interactive/apps/runSearchFlow.ts","../../src/features/interactive/apps/CiteFlowApp.tsx","../../src/features/interactive/apps/runCiteFlow.ts"],"sourcesContent":["/*\n SearchFlowApp - Single App for search -t flow\n \n Manages state transitions: search → action → (style/output-format if needed)\n * Following React Ink Single App Pattern (ADR-015)\n /\n\nimport { Box, useApp } from \"ink\";\nimport type React from \"react\";\nimport { createElement, useEffect, useState } from \"react\";\nimport type { CitationKeyFormat } from \"../../../config/schema.js\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport {\n type ActionMenuResult,\n type ActionType,\n OUTPUT_FORMAT_CHOICES,\n type OutputFormatType,\n STYLE_CHOICES,\n generateOutput,\n getActionChoices,\n isSideEffectAction,\n} from \"../action-menu.js\";\nimport {\n type Choice,\n 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config: SearchFlowConfig\n): Promise<ActionMenuResult> {\n // Convert references to choices and build lookup map\n const choices = allReferences.map(toChoice);\n const choiceMap = new Map(choices.map((c) => [c.id, c]));\n\n // Calculate effective visible count\n const effectiveLimit = calculateEffectiveLimit(config.limit);\n\n // Create filter function using the provided search function\n const filterFn = (query: string, choices: Choice<CslItem>[]): Choice<CslItem>[] => {\n if (!query.trim()) return choices;\n\n const results = searchFn(query);\n return results.flatMap((r) => {\n const choice = choiceMap.get(r.reference.id);\n return choice ? 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Reference selection (SearchableMultiSelect)\n * 2. Style selection (Select) - optional\n * 3. Exit\n /\nexport function CiteFlowApp({\n choices,\n filterFn,\n visibleCount,\n defaultSort,\n styleOptions,\n showStyleSelect,\n onComplete,\n onCancel,\n}: CiteFlowAppProps): React.ReactElement {\n const { exit } = useApp();\n const [state, setState] = useState<FlowState>(\"search\");\n const [selectedItems, setSelectedItems] = useState<CslItem[]>([]);\n const [pendingResult, setPendingResult] = useState<CiteFlowResult \| null>(null);\n\n // Exit when entering \"exiting\" state\n useEffect(() => {\n if (state === \"exiting\" && pendingResult) {\n exit();\n if (pendingResult.cancelled) {\n onCancel();\n } else {\n onComplete(pendingResult);\n }\n }\n }, [state, pendingResult, exit, onCancel, onComplete]);\n\n // Transition to exiting state with result\n const exitWith = (result: CiteFlowResult) => {\n setPendingResult(result);\n setState(\"exiting\");\n };\n\n // Handle search submission\n const handleSearchSubmit = (selected: Choice<CslItem>[]) => {\n if (selected.length === 0) {\n exitWith({ identifiers: [], cancelled: true });\n return;\n }\n const items = selected.map((c) => c.value);\n setSelectedItems(items);\n\n if (showStyleSelect) {\n setState(\"style\");\n } else {\n // No style selection needed, complete immediately\n exitWith({\n identifiers: items.map((item) => item.id),\n cancelled: false,\n });\n }\n };\n\n // Handle search cancel\n const handleSearchCancel = () => {\n exitWith({ identifiers: [], cancelled: true });\n };\n\n // Handle style selection\n const handleStyleSelect = (style: string) => {\n exitWith({\n identifiers: selectedItems.map((item) => item.id),\n style,\n cancelled: false,\n });\n };\n\n // Handle style cancel (go back to search)\n const handleStyleCancel = () => {\n setState(\"search\");\n };\n\n // Render based on current state\n if (state === \"exiting\") {\n return createElement(Box);\n }\n\n if (state === \"search\") {\n return createElement(SearchableMultiSelect<CslItem>, {\n choices,\n filterFn,\n visibleCount,\n onSubmit: handleSearchSubmit,\n onCancel: handleSearchCancel,\n header: \"Select references to cite\",\n placeholder: \"Type to search...\",\n defaultSort,\n });\n }\n\n // state === \"style\"\n const count = selectedItems.length;\n const refWord = count === 1 ? \"reference\" : \"references\";\n return createElement(Select<string>, {\n options: styleOptions,\n message: `Select citation style for ${count} ${refWord}:`,\n onSelect: handleStyleSelect,\n onCancel: handleStyleCancel,\n });\n}\n","/\n Runner for CiteFlowApp\n \n Provides the public API for running the cite flow.\n /\n\nimport { render } from \"ink\";\nimport { createElement } from \"react\";\nimport type { CslItem } from \"../../../core/csl-json/types.js\";\nimport type { SearchResult } from \"../../search/types.js\";\nimport { restoreStdinAfterInk } from \"../alternate-screen.js\";\nimport { formatIdentifiers } from \"../choice-builder.js\";\nimport {\n type Choice,\n type SelectOption,\n type SortOption,\n calculateEffectiveLimit,\n} from \"../components/index.js\";\nimport { formatAuthors } from \"../format.js\";\nimport { CiteFlowApp, type CiteFlowResult } from \"./CiteFlowApp.js\";\n\n/\n Configuration for the cite flow\n /\nexport interface CiteFlowConfig {\n /* Maximum number of results to display /\n limit: number;\n}\n\n/\n Search function type for filtering references\n /\nexport type SearchFunction = (query: string) => SearchResult[];\n\n/\n Extract year from CSL item\n /\nfunction extractYear(item: CslItem): number \| undefined {\n const dateParts = item.issued?.[\"date-parts\"];\n if (!dateParts \|\| dateParts.length === 0) return undefined;\n const firstDatePart = dateParts[0];\n if (!firstDatePart \|\| firstDatePart.length === 0) return undefined;\n return firstDatePart[0];\n}\n\n/\n Extract published date from CSL item\n /\nfunction extractPublishedDate(item: CslItem): Date \| undefined {\n const dateParts = item.issued?.[\"date-parts\"];\n if (!dateParts \|\| dateParts.length === 0) return undefined;\n const firstDatePart = dateParts[0];\n if (!firstDatePart \|\| firstDatePart.length === 0) return undefined;\n const [year, month = 1, day = 1] = firstDatePart;\n if (year === undefined) return undefined;\n return new Date(year, month - 1, day);\n}\n\n/\n Extract updated date from CSL item (from custom.timestamp)\n /\nfunction extractUpdatedDate(item: CslItem): Date \| undefined {\n const dateStr = item.custom?.timestamp;\n if (!dateStr \|\| typeof dateStr !== \"string\") return undefined;\n const date = new Date(dateStr);\n return Number.isNaN(date.getTime()) ? undefined : date;\n}\n\n/\n Extract created date from CSL item (from custom.created_at)\n /\nfunction extractCreatedDate(item: CslItem): Date \| undefined {\n const dateStr = item.custom?.created_at;\n if (!dateStr \|\| typeof dateStr !== \"string\") return undefined;\n const date = new Date(dateStr);\n return Number.isNaN(date.getTime()) ? undefined : date;\n}\n\n/\n Format item type for display\n /\nfunction formatType(type: string): string {\n const typeMap: Record<string, string> = {\n \"article-journal\": \"Journal article\",\n \"article-magazine\": \"Magazine article\",\n \"article-newspaper\": \"Newspaper article\",\n book: \"Book\",\n chapter: \"Book chapter\",\n \"paper-conference\": \"Conference paper\",\n thesis: \"Thesis\",\n report: \"Report\",\n webpage: \"Web page\",\n };\n return typeMap[type] ?? type;\n}\n\n/\n Convert CslItem to Choice for SearchableMultiSelect\n /\nfunction toChoice(item: CslItem): Choice<CslItem> {\n const authors = formatAuthors(item.author);\n const year = extractYear(item);\n const identifiers = formatIdentifiers(item);\n const itemType = formatType(item.type);\n\n // Build meta line: Year · Type · Identifiers\n const metaParts: string[] = [];\n if (year) metaParts.push(String(year));\n metaParts.push(itemType);\n if (identifiers) metaParts.push(identifiers);\n\n const updatedDate = extractUpdatedDate(item);\n const createdDate = extractCreatedDate(item);\n const publishedDate = extractPublishedDate(item);\n\n return {\n id: item.id,\n title: item.title ?? \"(No title)\",\n subtitle: authors \|\| \"(No authors)\",\n meta: metaParts.join(\" · \"),\n value: item,\n ...(updatedDate && { updatedDate }),\n ...(createdDate && { createdDate }),\n ...(publishedDate && { publishedDate }),\n };\n}\n\n/\n Options for running the cite flow\n /\nexport interface RunCiteFlowOptions {\n /* All references available for selection /\n allReferences: CslItem[];\n /* Search function for filtering /\n searchFn: SearchFunction;\n /* Flow configuration /\n config: CiteFlowConfig;\n /* Style options for style selection /\n styleOptions: SelectOption<string>[];\n /* Whether to show style selection /\n showStyleSelect: boolean;\n}\n\n/\n Run the cite flow (reference selection → style selection if needed)\n \n This is the main entry point for interactive cite command.\n */\nexport async function runCiteFlow(options: RunCiteFlowOptions): Promise<CiteFlowResult> {\n const { allReferences, searchFn, config, styleOptions, showStyleSelect } = options;\n\n // Convert references to choices\n const choices = allReferences.map(toChoice);\n\n // Calculate effective visible count\n const effectiveLimit = calculateEffectiveLimit(config.limit);\n\n // Create filter function using the provided search function\n const filterFn = (query: string, choices: Choice<CslItem>[]): Choice<CslItem>[] => {\n if (!query.trim()) return choices;\n\n const results = searchFn(query);\n return results.map((r) => toChoice(r.reference));\n };\n\n // Default sort option\n const defaultSort: SortOption = \"updated-desc\";\n\n // Create a promise to capture the result\n return new Promise<CiteFlowResult>((resolve) => {\n let flowResult: CiteFlowResult = {\n identifiers: [],\n cancelled: true,\n };\n\n const handleComplete = (result: CiteFlowResult): void => {\n flowResult = result;\n };\n\n const handleCancel = (): void => {\n 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package/dist/chunks/{index-of6eJn8N.js → index-DUpYvm-W.js} RENAMED Viewed

@@ -663,7 +663,7 @@ async function lookupPmcid(pmid, options) {
   const firstLinkset = linksets[0];
   if (!firstLinkset?.linksetdbs)
     return null;
-  const pmcLink = firstLinkset.linksetdbs.find((db) => db.dbto === "pmc");
+  const pmcLink = firstLinkset.linksetdbs.find((db) => db.dbto === "pmc" && db.linkname === "pubmed_pmc");
   if (!pmcLink?.links || pmcLink.links.length === 0)
     return null;
   const pmcNumericId = pmcLink.links[0];
@@ -671,13 +671,13 @@ async function lookupPmcid(pmid, options) {
 }
 async function checkPmc(ids, options) {
   if (ids.pmcid) {
-    return getPmcUrls(ids.pmcid);
+    return { locations: getPmcUrls(ids.pmcid) };
   }
   if (ids.pmid) {
     const pmcid = await lookupPmcid(ids.pmid);
     if (!pmcid)
       return null;
-    return getPmcUrls(pmcid);
+    return { locations: getPmcUrls(pmcid), discoveredPmcid: pmcid };
   }
   return null;
 }
@@ -768,16 +768,6 @@ async function checkUnpaywallDetailed(doi, email) {
   return result;
 }
 const DEFAULT_SOURCE_ORDER = ["pmc", "arxiv", "unpaywall", "core"];
-async function checkPmcSource(article) {
-  if (!article.pmid && !article.pmcid)
-    return void 0;
-  const ids = {};
-  if (article.pmid)
-    ids.pmid = article.pmid;
-  if (article.pmcid)
-    ids.pmcid = article.pmcid;
-  return await checkPmc(ids);
-}
 function checkArxivSource(article) {
   if (!article.arxivId)
     return void 0;
@@ -789,7 +779,6 @@ async function checkCoreSource(article, config) {
   return await checkCore(article.doi, config.coreApiKey);
 }
 const sourceCheckers = {
-  pmc: checkPmcSource,
   arxiv: checkArxivSource,
   core: checkCoreSource
 };
@@ -845,6 +834,27 @@ async function checkUnpaywallSource(enriched, config, state) {
     state.errors.push({ source: "unpaywall", error: String(err) });
   }
 }
+async function checkPmcSourceWithIds(enriched, state, discoveredIds) {
+  if (!enriched.pmid && !enriched.pmcid)
+    return;
+  const ids = {};
+  if (enriched.pmid)
+    ids.pmid = enriched.pmid;
+  if (enriched.pmcid)
+    ids.pmcid = enriched.pmcid;
+  state.sourcesChecked++;
+  try {
+    const result = await checkPmc(ids);
+    if (!result)
+      return;
+    state.locations.push(...result.locations);
+    if (result.discoveredPmcid) {
+      discoveredIds.pmcid = discoveredIds.pmcid ?? result.discoveredPmcid;
+    }
+  } catch (err) {
+    state.errors.push({ source: "pmc", error: String(err) });
+  }
+}
 async function checkGenericSource(source, enriched, config, state) {
   const checker = sourceCheckers[source];
   if (!checker)
@@ -864,9 +874,9 @@ async function lazyPmcCheck(enriched, state, discoveredIds) {
     return;
   discoveredIds.pmcid = discoveredIds.pmcid ?? state.unpaywallPmcid;
   try {
-    const pmcLocations = await checkPmc({ pmcid: state.unpaywallPmcid });
-    if (pmcLocations) {
-      state.locations.push(...pmcLocations);
+    const pmcResult = await checkPmc({ pmcid: state.unpaywallPmcid });
+    if (pmcResult) {
+      state.locations.push(...pmcResult.locations);
     }
   } catch (err) {
     state.errors.push({ source: "pmc-lazy", error: String(err) });
@@ -879,6 +889,8 @@ async function discoverOA(article, config) {
   for (const source of sourceOrder) {
     if (source === "unpaywall") {
       await checkUnpaywallSource(enriched, config, state);
+    } else if (source === "pmc") {
+      await checkPmcSourceWithIds(enriched, state, discoveredIds);
     } else {
       await checkGenericSource(source, enriched, config, state);
     }
@@ -12072,7 +12084,7 @@ function createAddRoute(library, config) {
 }
 const CHECK_CONCURRENCY = 5;
 async function checkReferences(library, options) {
-  const { checkReference } = await import("./checker-CKfdG8Ia.js");
+  const { checkReference } = await import("./checker-B-SL7krG.js");
   const save = options.save !== false;
   const skipDays = options.skipDays ?? 7;
   const items = await resolveItems(library, options);
@@ -12736,12 +12748,12 @@ export {
   isReservedRole as i,
   extensionToFormat as j,
   fulltextAttach as k,
-  fulltextGet as l,
-  fulltextDiscover as m,
+  fulltextDiscover as l,
+  fulltextFetch as m,
   normalizePathForOutput as n,
-  fulltextFetch as o,
+  fulltextConvert as o,
   parseFilename as p,
-  fulltextConvert as q,
+  fulltextGet as q,
   getExtension as r,
   getDefaultExportFromCjs as s,
   getFulltextAttachmentTypes as t,
@@ -12752,4 +12764,4 @@ export {
   fetcher as y,
   add as z
 };
-//# sourceMappingURL=index-of6eJn8N.js.map
+//# sourceMappingURL=index-DUpYvm-W.js.map