@nathapp/nax 0.21.0 → 0.22.0

package/test/integration/{precheck-integration.test.ts → cli/precheck-integration.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Integration tests for precheck integration with nax run
  *
@@ -19,11 +20,11 @@ import { afterEach, beforeEach, describe, expect, test } from "bun:test";
 const skipInCI = process.env.CI ? test.skip : test;
 import { mkdirSync, rmSync } from "node:fs";
 import { join } from "node:path";
-import type { NaxConfig } from "../../src/config";
-import { DEFAULT_CONFIG } from "../../src/config";
-import { run } from "../../src/execution";
-import type { PRD } from "../../src/prd";
-import { loadPRD } from "../../src/prd";
+import type { NaxConfig } from "../../../src/config";
+import { DEFAULT_CONFIG } from "../../../src/config";
+import { run } from "../../../src/execution";
+import type { PRD } from "../../../src/prd";
+import { loadPRD } from "../../../src/prd";
 
 describe("Precheck Integration with nax run", () => {
   let testDir: string;
@@ -34,7 +35,7 @@ describe("Precheck Integration with nax run", () => {
     savedSkipPrecheck = process.env.NAX_SKIP_PRECHECK;
     delete process.env.NAX_SKIP_PRECHECK;
 
-    testDir = join(import.meta.dir, "..", "..", ".tmp", `precheck-integration-${Date.now()}`);
+    testDir = join(import.meta.dir, "..", "..", "..", ".tmp", `precheck-integration-${Date.now()}`);
     mkdirSync(testDir, { recursive: true });
 
     // Initialize as git repo to pass git checks
@@ -152,7 +153,7 @@ describe("Precheck Integration with nax run", () => {
 
   test("AC4: --skip-precheck bypasses precheck validations", async () => {
     // Create non-git temp directory (will fail precheck)
-    const nonGitDir = join(import.meta.dir, "..", "..", ".tmp", `non-git-${Date.now()}`);
+    const nonGitDir = join(import.meta.dir, "..", "..", "..", ".tmp", `non-git-${Date.now()}`);
     mkdirSync(nonGitDir, { recursive: true });
 
     try {
@@ -242,7 +243,7 @@ describe("Precheck Integration with nax run", () => {
 
   test("AC2: Tier 1 blocker aborts run with descriptive error", async () => {
     // Create directory with uncommitted changes (will fail working-tree-clean check)
-    const dirtyDir = join(import.meta.dir, "..", "..", ".tmp", `dirty-${Date.now()}`);
+    const dirtyDir = join(import.meta.dir, "..", "..", "..", ".tmp", `dirty-${Date.now()}`);
     mkdirSync(dirtyDir, { recursive: true });
 
     try {
@@ -421,7 +422,7 @@ describe("Precheck Integration with nax run", () => {
 
   test("AC6: failed precheck updates status.json", async () => {
     // Create non-git directory (will fail precheck)
-    const nonGitDir = join(import.meta.dir, "..", "..", ".tmp", `non-git-status-${Date.now()}`);
+    const nonGitDir = join(import.meta.dir, "..", "..", "..", ".tmp", `non-git-status-${Date.now()}`);
     mkdirSync(nonGitDir, { recursive: true });
 
     try {

package/test/integration/{precheck-orchestrator.test.ts → cli/precheck-orchestrator.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * US-002: Precheck orchestrator with formatted output
  *
@@ -14,9 +15,9 @@ const skipInCI = process.env.CI ? test.skip : test;
 import { mkdirSync, mkdtempSync, rmSync, writeFileSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { join } from "node:path";
-import type { NaxConfig } from "../../src/config";
-import type { PRD } from "../../src/prd/types";
-import { EXIT_CODES, runPrecheck } from "../../src/precheck";
+import type { NaxConfig } from "../../../src/config";
+import type { PRD } from "../../../src/prd/types";
+import { EXIT_CODES, runPrecheck } from "../../../src/precheck";
 
 // Helper to create a minimal valid git environment
 async function setupGitRepo(dir: string): Promise<void> {

package/test/integration/{precheck.test.ts → cli/precheck.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Integration tests for precheck functionality
  *
@@ -15,10 +16,10 @@ const describeWithClaude = process.env.CI ? describe.skip : describe;
 import { mkdirSync, mkdtempSync, rmSync, writeFileSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { join } from "node:path";
-import type { NaxConfig } from "../../src/config";
-import type { PRD, UserStory } from "../../src/prd/types";
-import { runPrecheck } from "../../src/precheck";
-import type { PrecheckResult } from "../../src/precheck/types";
+import type { NaxConfig } from "../../../src/config";
+import type { PRD, UserStory } from "../../../src/prd/types";
+import { runPrecheck } from "../../../src/precheck";
+import type { PrecheckResult } from "../../../src/precheck/types";
 
 // ─────────────────────────────────────────────────────────────────────────────
 // Test fixtures

package/test/integration/{config-loader.test.ts → config/config-loader.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Config Loader Tests
  *
@@ -18,7 +19,7 @@ import { existsSync, renameSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { homedir } from "node:os";
 import { join } from "node:path";
-import { globalConfigPath, loadConfig } from "../../src/config/loader";
+import { globalConfigPath, loadConfig } from "../../../src/config/loader";
 
 describe("Config Loader - Backward Compatibility", () => {
   let tempDir: string;

package/test/integration/{config.test.ts → config/config.test.ts}

@@ -1,6 +1,6 @@
 import { describe, expect, test } from "bun:test";
-import { DEFAULT_CONFIG, NaxConfigSchema } from "../../src/config/schema";
-import type { TddStrategy, TestStrategy } from "../../src/config/schema";
+import { DEFAULT_CONFIG, NaxConfigSchema } from "../../../src/config/schema";
+import type { TddStrategy, TestStrategy } from "../../../src/config/schema";
 
 describe("Config Validation", () => {
   test("accepts valid default config", () => {

package/test/integration/config/merger.test.ts

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Config Merger Test Suite
  *

package/test/integration/config/paths.test.ts

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Config Paths Test Suite
  *

package/test/integration/{security-loader.test.ts → config/security-loader.test.ts}

@@ -1,6 +1,6 @@
 import { describe, expect, test, beforeEach, afterEach } from "bun:test";
-import { loadPlugins, _setPluginErrorSink, _resetPluginErrorSink } from "../../src/plugins/loader";
-import { loadCustomStrategy } from "../../src/routing/loader";
+import { loadPlugins, _setPluginErrorSink, _resetPluginErrorSink } from "../../../src/plugins/loader";
+import { loadCustomStrategy } from "../../../src/routing/loader";
 import { resolve } from "node:path";
 import * as fs from "node:fs/promises";
 

package/test/integration/{context-integration.test.ts → context/context-integration.test.ts}

@@ -1,14 +1,15 @@
+// RE-ARCH: keep
 /**
  * Integration tests for context builder with execution runner
  */
 
 import { afterEach, beforeEach, describe, expect, test } from "bun:test";
-import { DEFAULT_CONFIG } from "../../src/config";
-import { buildContext, formatContextAsMarkdown } from "../../src/context/builder";
-import type { ContextBudget, StoryContext } from "../../src/context/types";
-import { run } from "../../src/execution/runner";
-import type { RunOptions } from "../../src/execution/runner";
-import type { PRD, UserStory } from "../../src/prd";
+import { DEFAULT_CONFIG } from "../../../src/config";
+import { buildContext, formatContextAsMarkdown } from "../../../src/context/builder";
+import type { ContextBudget, StoryContext } from "../../../src/context/types";
+import { run } from "../../../src/execution/runner";
+import type { RunOptions } from "../../../src/execution/runner";
+import type { PRD, UserStory } from "../../../src/prd";
 
 // Sample PRD for testing
 const createTestPRD = (stories: Partial<UserStory>[]): PRD => ({

package/test/integration/{path-security.test.ts → context/context-path-security.test.ts}

@@ -2,8 +2,8 @@ import { afterAll, beforeAll, describe, expect, test } from "bun:test";
 import { existsSync, mkdirSync, realpathSync, rmSync, symlinkSync, writeFileSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { join } from "node:path";
-import { MAX_DIRECTORY_DEPTH, isWithinDirectory, validateDirectory, validateFilePath } from "../../src/config";
-import { findProjectDir } from "../../src/config/loader";
+import { MAX_DIRECTORY_DEPTH, isWithinDirectory, validateDirectory, validateFilePath } from "../../../src/config";
+import { findProjectDir } from "../../../src/config/loader";
 
 // Create a temporary test directory
 const testRoot = join(tmpdir(), `nax-path-test-${Date.now()}`);

package/test/integration/{context-provider-injection.test.ts → context/context-provider-injection.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Context Provider Injection Tests (US-002)
  *
@@ -7,12 +8,12 @@
  */
 
 import { afterEach, beforeEach, describe, expect, mock, test } from "bun:test";
-import { DEFAULT_CONFIG } from "../../src/config/schema";
-import { contextStage } from "../../src/pipeline/stages/context";
-import type { PipelineContext } from "../../src/pipeline/types";
-import { PluginRegistry } from "../../src/plugins/registry";
-import type { IContextProvider, NaxPlugin } from "../../src/plugins/types";
-import type { PRD, UserStory } from "../../src/prd/types";
+import { DEFAULT_CONFIG } from "../../../src/config/schema";
+import { contextStage } from "../../../src/pipeline/stages/context";
+import type { PipelineContext } from "../../../src/pipeline/types";
+import { PluginRegistry } from "../../../src/plugins/registry";
+import type { IContextProvider, NaxPlugin } from "../../../src/plugins/types";
+import type { PRD, UserStory } from "../../../src/prd/types";
 
 /**
  * Create a minimal test context for context stage testing

package/test/integration/{context-verification-integration.test.ts → context/context-verification-integration.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Integration tests for contextFiles/expectedFiles split
  * Verifies that context builder and verification use the correct resolvers
@@ -7,10 +8,10 @@ import { describe, expect, test } from "bun:test";
 import fs from "node:fs/promises";
 import os from "node:os";
 import path from "node:path";
-import { buildContext } from "../../src/context/builder";
-import type { ContextBudget, StoryContext } from "../../src/context/types";
-import { getContextFiles, getExpectedFiles } from "../../src/prd";
-import type { PRD, UserStory } from "../../src/prd";
+import { buildContext } from "../../../src/context/builder";
+import type { ContextBudget, StoryContext } from "../../../src/context/types";
+import { getContextFiles, getExpectedFiles } from "../../../src/prd";
+import type { PRD, UserStory } from "../../../src/prd";
 
 const createTestPRD = (stories: Partial<UserStory>[]): PRD => ({
   project: "test-project",

package/test/integration/{s5-greenfield-fallback.test.ts → context/s5-greenfield-fallback.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * S5: Strategy Fallback Tests
  *
@@ -8,9 +9,9 @@
  */
 
 import { describe, expect, test } from "bun:test";
-import { resolveMaxAttemptsOutcome } from "../../src/execution/runner";
-import type { UserStory } from "../../src/prd";
-import type { FailureCategory } from "../../src/tdd/types";
+import { resolveMaxAttemptsOutcome } from "../../../src/execution/runner";
+import type { UserStory } from "../../../src/prd";
+import type { FailureCategory } from "../../../src/tdd/types";
 
 describe("S5: greenfield-no-tests fallback", () => {
   /**

package/test/integration/{isolation.test.ts → execution/execution-isolation.test.ts}

@@ -3,7 +3,7 @@ import { execSync } from "node:child_process";
 import { mkdtempSync, rmSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { join } from "node:path";
-import { isSourceFile, isTestFile, verifyTestWriterIsolation } from "../../src/tdd";
+import { isSourceFile, isTestFile, verifyTestWriterIsolation } from "../../../src/tdd";
 
 describe("isTestFile", () => {
   test("matches test/ directory", () => {

package/test/integration/{execution.test.ts → execution/execution.test.ts}

@@ -1,9 +1,9 @@
 import { afterEach, beforeEach, describe, expect, test } from "bun:test";
-import { DEFAULT_CONFIG } from "../../src/config";
-import { run } from "../../src/execution/runner";
-import type { RunOptions } from "../../src/execution/runner";
-import { initLogger, resetLogger } from "../../src/logger";
-import type { PRD, UserStory } from "../../src/prd";
+import { DEFAULT_CONFIG } from "../../../src/config";
+import { run } from "../../../src/execution/runner";
+import type { RunOptions } from "../../../src/execution/runner";
+import { initLogger, resetLogger } from "../../../src/logger";
+import type { PRD, UserStory } from "../../../src/prd";
 
 // Sample PRD for testing
 const createTestPRD = (stories: Partial<UserStory>[]): PRD => ({
@@ -521,7 +521,7 @@ describe("execution runner — lite mode routing", () => {
 
   test("config tdd.strategy='lite' routes complex stories to three-session-tdd-lite", async () => {
     // Using routeTask directly to verify routing decision
-    const { routeTask } = await import("../../src/routing");
+    const { routeTask } = await import("../../../src/routing");
 
     const configWithLiteStrategy = {
       ...DEFAULT_CONFIG,
@@ -541,7 +541,7 @@ describe("execution runner — lite mode routing", () => {
   });
 
   test("config tdd.strategy='strict' routes complex stories to three-session-tdd", async () => {
-    const { routeTask } = await import("../../src/routing");
+    const { routeTask } = await import("../../../src/routing");
 
     const configWithStrictStrategy = {
       ...DEFAULT_CONFIG,
@@ -561,7 +561,7 @@ describe("execution runner — lite mode routing", () => {
   });
 
   test("config tdd.strategy='auto' routes complex UI-tagged stories to three-session-tdd-lite", async () => {
-    const { routeTask } = await import("../../src/routing");
+    const { routeTask } = await import("../../../src/routing");
 
     // With auto strategy + ui tag + complex story → three-session-tdd-lite
     // (T3: complex/expert with lite tags → three-session-tdd-lite)

package/test/integration/{parallel.test.ts → execution/parallel.test.ts}

@@ -1,3 +1,4 @@
+// RE-ARCH: keep
 /**
  * Parallel Execution Tests
  *
@@ -9,7 +10,7 @@
  */
 
 import { describe, expect, test } from "bun:test";
-import type { UserStory } from "../../src/prd/types";
+import type { UserStory } from "../../../src/prd/types";
 
 describe("Parallel Execution", () => {
   describe("Story Grouping", () => {

package/test/integration/{prd-pause.test.ts → execution/prd-pause.test.ts}

@@ -1,6 +1,6 @@
 import { describe, expect, test } from "bun:test";
-import { countStories, generateHumanHaltSummary, getNextStory, isStalled, markStoryPaused } from "../../src/prd";
-import type { PRD } from "../../src/prd/types";
+import { countStories, generateHumanHaltSummary, getNextStory, isStalled, markStoryPaused } from "../../../src/prd";
+import type { PRD } from "../../../src/prd/types";
 
 describe("PRD pause functionality", () => {
   const createTestPRD = (): PRD => ({

package/test/integration/{prd-resolvers.test.ts → execution/prd-resolvers.test.ts}

@@ -1,10 +1,11 @@
+// RE-ARCH: keep
 /**
  * Tests for PRD resolver functions: getContextFiles and getExpectedFiles
  */
 
 import { describe, expect, test } from "bun:test";
-import { getContextFiles, getExpectedFiles } from "../../src/prd";
-import type { UserStory } from "../../src/prd";
+import { getContextFiles, getExpectedFiles } from "../../../src/prd";
+import type { UserStory } from "../../../src/prd";
 
 const createStory = (partial: Partial<UserStory>): UserStory => ({
   id: "US-001",

package/test/integration/{progress.test.ts → execution/progress.test.ts}

@@ -1,5 +1,5 @@
 import { describe, expect, test } from "bun:test";
-import { appendProgress } from "../../src/execution/progress";
+import { appendProgress } from "../../../src/execution/progress";
 
 describe("appendProgress", () => {
   test("creates progress.txt and appends entry", async () => {