@nanonets/graft 0.12.1 → 0.13.0

package/dist/graph/bindings.js.map

@@ -1 +1 @@
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package/dist/graph/check.d.ts

@@ -8,6 +8,9 @@ export interface GraphCheckResult {
     stale: string[];
     /** Nodes never summarized (reported for context; not counted as drift). */
     pending: number;
+    /** Ids of pending nodes (capped when formatting) — so a stuck meaning pass
+     * names the files instead of only saying "run --deep" (#172). */
+    pendingIds: string[];
     /** Committed nodes in total — the denominator that turns `pending` into a
      * coverage figure. A deep build that lost most of its LLM calls (#127) is only
      * distinguishable from a deliberate Tier-1 build by the SHARE that is missing. */

package/dist/graph/check.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../src/graph/check.ts"],"names":[],"mappings":"AA4BA,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,OAAO,CAAC;IACZ,uEAAuE;IACvE,OAAO,EAAE,OAAO,CAAC;IACjB,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,2EAA2E;IAC3E,OAAO,EAAE,MAAM,CAAC;IAChB;;sFAEkF;IAClF,KAAK,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,iBAAiB;IAChC,UAAU,CAAC,EAAE,MAAM,CAAC;CACrB;AAMD,wBAAsB,UAAU,CAC9B,GAAG,EAAE,MAAM,EACX,IAAI,GAAE,iBAAsB,GAC3B,OAAO,CAAC,gBAAgB,CAAC,CAoE3B;AAED,8DAA8D;AAC9D,wBAAgB,sBAAsB,CAAC,CAAC,EAAE,gBAAgB,GAAG,MAAM,CAoClE"}
+{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../src/graph/check.ts"],"names":[],"mappings":"AA4BA,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,OAAO,CAAC;IACZ,uEAAuE;IACvE,OAAO,EAAE,OAAO,CAAC;IACjB,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,2EAA2E;IAC3E,OAAO,EAAE,MAAM,CAAC;IAChB;qEACiE;IACjE,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB;;sFAEkF;IAClF,KAAK,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,iBAAiB;IAChC,UAAU,CAAC,EAAE,MAAM,CAAC;CACrB;AAMD,wBAAsB,UAAU,CAC9B,GAAG,EAAE,MAAM,EACX,IAAI,GAAE,iBAAsB,GAC3B,OAAO,CAAC,gBAAgB,CAAC,CA0E3B;AAED,8DAA8D;AAC9D,wBAAgB,sBAAsB,CAAC,CAAC,EAAE,gBAAgB,GAAG,MAAM,CAkClE"}

package/dist/graph/check.js

@@ -40,6 +40,7 @@ export async function checkGraph(dir, opts = {}) {
         changed: [],
         stale: [],
         pending: 0,
+        pendingIds: [],
         nodes: 0,
     };
     const committed = readGraph(wiringPath(outDir));
@@ -84,15 +85,18 @@ export async function checkGraph(dir, opts = {}) {
             result.changed.push(id);
         if (node.summary_state === "stale")
             result.stale.push(id);
-        if (node.summary_state === "pending")
+        if (node.summary_state === "pending") {
             result.pending++;
+            result.pendingIds.push(id);
+        }
     }
     for (const id of current.keys()) {
         if (!committedById.has(id))
             result.added.push(id);
     }
-    for (const arr of [result.added, result.removed, result.changed, result.stale])
+    for (const arr of [result.added, result.removed, result.changed, result.stale, result.pendingIds]) {
         arr.sort();
+    }
     result.ok =
         result.added.length === 0 &&
             result.removed.length === 0 &&
@@ -109,9 +113,7 @@ export function formatGraphCheckReport(r) {
         // A share, not a bare count: "1203 not yet summarized" reads the same whether
         // the repo was never deep-built or a deep build failed most of its calls.
         const pct = r.nodes > 0 ? Math.round(((r.nodes - r.pending) / r.nodes) * 100) : 0;
-        const note = r.pending
-            ? ` (meaning tier ${pct}% complete — ${r.pending} of ${r.nodes} node(s) not yet summarized; run \`graft build --deep\`)`
-            : "";
+        const note = r.pending ? ` (${formatPendingNote(r, pct)})` : "";
         return `graph check: OK — the wiring graph is in sync with the code.${note}`;
     }
     const lines = ["graph check: STALE", ""];
@@ -143,4 +145,19 @@ export function formatGraphCheckReport(r) {
         lines.push("Run `graft build --deep` to refresh stale summaries.");
     return lines.join("\n");
 }
+/** Cap how many pending ids the OK-note lists so a large Tier-1 graph stays readable. */
+const PENDING_SAMPLE = 8;
+function formatPendingNote(r, pct) {
+    const ids = r.pendingIds ?? [];
+    const sample = ids.slice(0, PENDING_SAMPLE);
+    const more = ids.length > PENDING_SAMPLE ? `, … +${ids.length - PENDING_SAMPLE} more` : "";
+    const named = sample.length ? `: ${sample.join(", ")}${more}` : "";
+    // Tier-1-only builds are supposed to leave everything pending — "run --deep"
+    // is the right next step. A deep build that still left them pending used to
+    // dead-end here (#172): re-running the same command never cleared empty/failed
+    // meaning replies, so name the nodes and point at the last build's errors.
+    return (`meaning tier ${pct}% complete — ${r.pending} of ${r.nodes} node(s) pending${named}. ` +
+        `Run \`graft build --deep\` to summarize them; if a deep build already left these pending, ` +
+        `that meaning pass failed — see that build's errors (re-running alone will not clear them)`);
+}
 //# sourceMappingURL=check.js.map

package/dist/graph/check.js.map

@@ -1 +1 @@
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package/dist/graph/enrich.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"enrich.d.ts","sourceRoot":"","sources":["../../src/graph/enrich.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AACH,OAAO,KAAK,EAAE,cAAc,EAAqB,MAAM,eAAe,CAAC;AAEvE,OAAO,KAAK,EAAQ,MAAM,EAAE,MAAM,YAAY,CAAC;AAQ/C,MAAM,WAAW,aAAa;IAC5B,sFAAsF;IACtF,UAAU,CAAC,EAAE,cAAc,CAAC;IAC5B,oGAAoG;IACpG,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,yFAAyF;IACzF,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;IAC5E;;;;;;OAMG;IACH,UAAU,CAAC,EAAE,MAAM,IAAI,CAAC;CACzB;AASD,MAAM,WAAW,WAAW;IAC1B,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB;;iCAE6B;IAC7B,WAAW,EAAE,MAAM,CAAC;IACpB,iFAAiF;IACjF,YAAY,EAAE,MAAM,CAAC;IACrB;;4EAEwE;IACxE,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,wBAAsB,WAAW,CAC/B,KAAK,EAAE,MAAM,EAAE,EACf,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC1B,OAAO,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC5B,IAAI,GAAE,aAAkB,GACvB,OAAO,CAAC,WAAW,CAAC,CAkItB"}
+{"version":3,"file":"enrich.d.ts","sourceRoot":"","sources":["../../src/graph/enrich.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AACH,OAAO,KAAK,EAAE,cAAc,EAAqB,MAAM,eAAe,CAAC;AAEvE,OAAO,KAAK,EAAQ,MAAM,EAAE,MAAM,YAAY,CAAC;AAQ/C,MAAM,WAAW,aAAa;IAC5B,sFAAsF;IACtF,UAAU,CAAC,EAAE,cAAc,CAAC;IAC5B,oGAAoG;IACpG,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,yFAAyF;IACzF,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;IAC5E;;;;;;OAMG;IACH,UAAU,CAAC,EAAE,MAAM,IAAI,CAAC;CACzB;AASD,MAAM,WAAW,WAAW;IAC1B,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB;;iCAE6B;IAC7B,WAAW,EAAE,MAAM,CAAC;IACpB,iFAAiF;IACjF,YAAY,EAAE,MAAM,CAAC;IACrB;;4EAEwE;IACxE,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,wBAAsB,WAAW,CAC/B,KAAK,EAAE,MAAM,EAAE,EACf,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC1B,OAAO,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC5B,IAAI,GAAE,aAAkB,GACvB,OAAO,CAAC,WAAW,CAAC,CAgJtB"}

package/dist/graph/enrich.js

@@ -99,27 +99,40 @@ export async function enrichGraph(nodes, prior, sources, opts = {}) {
             return { id: n.id, kind: n.kind, signature: n.signature, startLine, endLine };
         });
         const { results, error } = await collectFileCrux(summarizer, path, source, refs);
-        if (error) {
-            stats.errors.push(`${path}: ${error}`);
-            gate.record(error);
-        }
-        else {
-            gate.succeeded();
+        let fileError = error;
+        if (fileError) {
+            stats.errors.push(`${path}: ${fileError}`);
+            gate.record(fileError);
         }
+        let applied = 0;
         for (const node of fileNodes) {
             const r = results.size > 0 ? results.get(node.id) : undefined;
-            if (!r) {
-                // whole-file call failed, or the model skipped this symbol: keep what it had.
+            // Empty / whitespace-only summaries are not success: caching them as
+            // `ready` made the next `--deep` a permanent cache hit (#172).
+            if (!r || !r.summary.trim()) {
+                // whole-file call failed, the model skipped this symbol, or it returned
+                // an empty summary: keep what it had and leave it retryable.
                 if (node.summary_state === "stale")
                     stats.stale++;
                 else
                     stats.pending++;
                 continue;
             }
-            node.summary = r.summary || null;
+            node.summary = r.summary;
             node.crux = buildCrux(r, node, source, lineCount);
             node.summary_state = "ready";
             stats.computed++;
+            applied++;
+        }
+        if (!fileError && refs.length > 0 && applied === 0) {
+            // collectFileCrux already labels a total miss; this catches "got entries
+            // but every summary was blank" so the CLI's #127 degraded-exit path fires.
+            fileError = "model returned no usable symbol summaries";
+            stats.errors.push(`${path}: ${fileError}`);
+            gate.record(fileError);
+        }
+        else if (!fileError) {
+            gate.succeeded();
         }
         // Report on completion so the counter climbs monotonically under concurrency.
         opts.onProgress?.({ index: done++, total: files.length, node: path });
@@ -171,6 +184,13 @@ async function collectFileCrux(summarizer, path, source, refs) {
             break;
         }
     }
+    // A total miss used to return `{ results: ∅ }` with no error — enrich left
+    // every node `pending`, the CLI exited 0, and `graft check` told the user to
+    // re-run `--deep` forever (#172). Surface it as a failure like a thrown error.
+    if (!error && refs.length > 0 && results.size === 0) {
+        error =
+            "model returned no symbol summaries (empty tool response — the provider may ignore forced tool_choice)";
+    }
     return { results, error };
 }
 /**

package/dist/graph/enrich.js.map

@@ -1 +1 @@
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package/dist/graph/extract.d.ts

@@ -1,6 +1,6 @@
 import { type FileBindings } from "./bindings.js";
 import type { Kind, NodeV1, Relation } from "./types.js";
-export type Language = "typescript" | "tsx" | "python" | "go" | "java" | "php";
+export type Language = "typescript" | "tsx" | "python" | "go" | "java" | "kotlin" | "php" | "r";
 /** Every file extension a depth-tier (hand-written) extractor claims. */
 export declare function depthExtensions(): string[];
 /** Map a file path to a supported language, or null if unsupported. */
@@ -26,6 +26,16 @@ export interface RawEdge {
     /** calls with viaMember: the receiver's resolved type name (from bindings /
      * self / this / Go receiver), when a confident local clue exists. */
     recvType?: string;
+    /** calls without viaMember: which kinds the bare-name match may resolve to.
+     * Every other language's bare-name call is always a free function, so this
+     * is absent for them (resolve.ts defaults to `["function"]`). R (Phase 4) is
+     * the one exception: `obj$method()` with an untyped receiver (not
+     * self/private/super, which already resolve precisely via viaMember+recvType)
+     * still has a real shot at a correct match if the method name happens to be
+     * uniquely defined across the repo — R6 methods are kind "method", not
+     * "function", so without this override every such call would be
+     * unconditionally unresolvable rather than just occasionally ambiguous. */
+    kinds?: Kind[];
     /** calls: the number of arguments at the CALL SITE. Only emitted for languages
      * with overloading (Java), where a same-named sibling on the same class is
      * otherwise indistinguishable — and picking wrong turns a delegating overload
@@ -51,6 +61,9 @@ export interface WalkCtx {
         name: string;
         specifier: string;
     }>;
+    rR6Access: "public" | "private" | "active" | null;
+    rGenerics: ReadonlySet<string>;
+    rSuperClass: string | null;
 }
 export declare function extractFile(rel: string, source: string, lang: Language): ExtractResult;
 /** Mint-time uniqueness: a document-order duplicate (same name reopened, or two

package/dist/graph/extract.d.ts.map

@@ -1 +1 @@
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