@nanonets/graft 0.10.0 → 0.10.1

package/dist/graph/invariants.js.map

@@ -0,0 +1 @@
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package/dist/graph/resolve.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/graph/resolve.ts"],"names":[],"mappings":"AAgBA,OAAO,KAAK,EAAE,MAAM,EAAQ,MAAM,EAAY,MAAM,YAAY,CAAC;AACjE,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,cAAc,CAAC;AAI5C;;sDAEsD;AACtD,MAAM,WAAW,QAAQ;IACvB,MAAM,EAAE,MAAM,CAAC;IACf,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,cAAc;IAC7B;;6FAEyF;IACzF,SAAS,CAAC,EAAE,QAAQ,EAAE,CAAC;CACxB;AAED,wBAAgB,YAAY,CAC1B,KAAK,EAAE,MAAM,EAAE,EACf,QAAQ,EAAE,OAAO,EAAE,EACnB,IAAI,GAAE,cAAmB,GACxB,MAAM,EAAE,CAiGV"}
+{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/graph/resolve.ts"],"names":[],"mappings":"AAgBA,OAAO,KAAK,EAAE,MAAM,EAAQ,MAAM,EAAY,MAAM,YAAY,CAAC;AACjE,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,cAAc,CAAC;AAI5C;;sDAEsD;AACtD,MAAM,WAAW,QAAQ;IACvB,MAAM,EAAE,MAAM,CAAC;IACf,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,cAAc;IAC7B;;6FAEyF;IACzF,SAAS,CAAC,EAAE,QAAQ,EAAE,CAAC;CACxB;AAED,wBAAgB,YAAY,CAC1B,KAAK,EAAE,MAAM,EAAE,EACf,QAAQ,EAAE,OAAO,EAAE,EACnB,IAAI,GAAE,cAAmB,GACxB,MAAM,EAAE,CAmIV"}

package/dist/graph/resolve.js

@@ -24,6 +24,11 @@ export function resolveEdges(nodes, rawEdges, opts = {}) {
     const ownerMethod = new Map();
     // Go package resolution: dir (posix) → its `.go` file node ids, for import mapping.
     const goFilesByDir = new Map();
+    // Java package resolution: a file's package-path suffix (`com/acme/Foo.java`) → its
+    // file node ids. A Java import names a type by its fully-qualified name, which by
+    // language convention mirrors the directory path under whatever source root the
+    // project uses (`src/main/java/`, `src/`, …) — so the suffix is the portable key.
+    const javaFilesBySuffix = new Map();
     const hasGoModules = !!opts.goModules?.length;
     for (const n of nodes) {
         if (n.kind === "file") {
@@ -31,6 +36,14 @@ export function resolveEdges(nodes, rawEdges, opts = {}) {
                 const dir = posix.dirname(toPosixPath(n.path));
                 push(goFilesByDir, dir, n.id);
             }
+            if (n.path.endsWith(".java")) {
+                // Index every directory-boundary suffix, since the source root is unknown:
+                // `src/main/java/com/acme/Foo.java` is reachable as `com/acme/Foo.java`,
+                // `acme/Foo.java`, and so on. The import's own FQN picks the right depth.
+                const parts = toPosixPath(n.path).split("/");
+                for (let i = 0; i < parts.length; i++)
+                    push(javaFilesBySuffix, parts.slice(i).join("/"), n.id);
+            }
             continue;
         }
         push(globalName, n.name, n);
@@ -73,7 +86,9 @@ export function resolveEdges(nodes, rawEdges, opts = {}) {
         else if (e.relation === "imports" && e.specifier) {
             const target = hasGoModules && e.file.endsWith(".go")
                 ? resolveGoImport(e.specifier, opts.goModules, goFilesByDir)
-                : resolveImport(e.specifier, e.file, byId);
+                : e.file.endsWith(".java")
+                    ? resolveJavaImport(e.specifier, javaFilesBySuffix)
+                    : resolveImport(e.specifier, e.file, byId);
             add(e.source, target, "imports", "extracted");
         }
         else if (e.relation === "extends" || e.relation === "implements") {
@@ -82,22 +97,35 @@ export function resolveEdges(nodes, rawEdges, opts = {}) {
             // an unresolved base is usually an external/imported type — keep the name.
             add(e.source, hit?.id ?? e.name, e.relation, hit?.confidence ?? "inferred");
         }
-        else if (e.relation === "references" && e.name && e.specifier) {
-            // A named import gives both halves needed for sound resolution: the module
-            // it came from and the exported name. Resolve inside that file only, so a
-            // same-named symbol elsewhere in the repo cannot become a false edge.
-            const targetFile = resolveImport(e.specifier, e.file, byId);
-            if (!byId.has(targetFile))
-                continue; // external or unresolved module
-            const candidates = perFileName.get(targetFile)?.get(e.name) ?? [];
-            if (candidates.length === 1)
-                add(e.source, candidates[0].id, "references", "extracted");
+        else if (e.relation === "references" && e.name) {
+            if (e.specifier) {
+                // A named import gives both halves needed for sound resolution: the module
+                // it came from and the exported name. Resolve inside that file only, so a
+                // same-named symbol elsewhere in the repo cannot become a false edge.
+                const targetFile = resolveImport(e.specifier, e.file, byId);
+                if (!byId.has(targetFile))
+                    continue; // external or unresolved module
+                const candidates = perFileName.get(targetFile)?.get(e.name) ?? [];
+                if (candidates.length === 1)
+                    add(e.source, candidates[0].id, "references", "extracted");
+            }
+            else if (byId.get(e.source)?.origin === "generic") {
+                // Breadth tier: a bare-name structural reference (extends / implements /
+                // object-creation / module alias) the grammar marked but cannot type. Resolve
+                // to a type-like definition, drop-rather-than-guess, never a self-loop. Gated on
+                // generic origin so depth-tier references (which always carry a specifier) are
+                // provably untouched.
+                const refKinds = ["class", "interface", "struct", "enum", "type", "module"];
+                const hit = resolveName(e.name, e.file, refKinds, perFileName, globalName);
+                if (hit && hit.id !== e.source)
+                    add(e.source, hit.id, "references", hit.confidence);
+            }
         }
         else if (e.relation === "calls") {
             if (e.viaMember) {
                 if (!e.recvType)
                     continue;
-                const hit = resolveTypedMember(e.recvType, e.name, e.file, ownerMethod, classParents);
+                const hit = resolveTypedMember(e.recvType, e.name, e.file, ownerMethod, classParents, e.argCount);
                 if (hit === "ambiguous")
                     continue; // drop — never guess past an ambiguous owner
                 if (hit)
@@ -108,14 +136,22 @@ export function resolveEdges(nodes, rawEdges, opts = {}) {
                 // vs a compiler-grade oracle) for a 3x count inflation, i.e. noise. See #35.
                 continue;
             }
-            // Depth-tier bare calls are function calls (method calls arrive as viaMember
-            // with a receiver type). The generic breadth tier can't type receivers, so its
-            // tags.scm @reference.call/@reference.send capture ALL calls as bare names —
-            // in method-heavy languages (Java, Ruby, C#) those target methods. Widen the
-            // candidate kinds to methods ONLY for generic-origin sources, so depth-tier
-            // precision is untouched (an ambiguous function-vs-method name still drops).
+            // Three cases, because "a bare call" means something different per tier:
+            //
+            //  - generic (breadth tier): tags.scm captures ALL calls as bare names, since it
+            //    cannot type a receiver. In method-heavy languages those target methods, so
+            //    widen to methods — ONLY here, leaving depth-tier precision untouched (an
+            //    ambiguous function-vs-method name still drops).
+            //  - Java (depth tier): an implicit-`this` call is spelled as a member call in
+            //    extract.ts, so the only bare call reaching here is `new Foo()`, whose target
+            //    is a TYPE. Against the function index every constructor edge would drop.
+            //  - everything else: functions, exactly as before.
             const srcOrigin = byId.get(e.source)?.origin;
-            const callKinds = srcOrigin === "generic" ? ["function", "method"] : ["function"];
+            const callKinds = srcOrigin === "generic"
+                ? ["function", "method"]
+                : e.file.endsWith(".java")
+                    ? ["class", "struct", "enum", "interface"]
+                    : ["function"];
             const hit = resolveName(e.name, e.file, callKinds, perFileName, globalName);
             if (hit)
                 add(e.source, hit.id, "calls", hit.confidence); // drop unresolved calls (too noisy)
@@ -156,15 +192,40 @@ function resolveName(name, file, kinds, perFileName, globalName) {
  *   - `null` — the whole chain (recvType + ancestors, breadth-first, depth ≤ 3,
  *     cycle-guarded) had zero candidates at every level.
  */
-function resolveTypedMember(recvType, name, file, ownerMethod, classParents) {
+/**
+ * Narrow an overload set to the candidates a call of `argCount` arguments could
+ * reach. Only Java emits `argCount`/`arity`, so for every other language this is
+ * the identity function and resolution is byte-for-byte what it was.
+ *
+ * Deliberately conservative in both directions:
+ *   - A variadic candidate (`String... xs`) accepts anything from `arity - 1`
+ *     upward, so it is never filtered out by count.
+ *   - A candidate with no recorded arity (a graph built before this field) is
+ *     kept, since absence of data is not evidence of a mismatch.
+ *   - If narrowing leaves nothing, the ORIGINAL set is returned. An empty result
+ *     would silently drop a real edge; handing the full set back lets the existing
+ *     same-file / "ambiguous" logic make the call exactly as before.
+ */
+function narrowByArity(candidates, argCount) {
+    if (argCount === undefined || candidates.length < 2)
+        return candidates;
+    const fits = candidates.filter((c) => {
+        if (c.arity === undefined)
+            return true;
+        return c.variadic ? argCount >= c.arity - 1 : c.arity === argCount;
+    });
+    return fits.length > 0 ? fits : candidates;
+}
+function resolveTypedMember(recvType, name, file, ownerMethod, classParents, argCount) {
     const MAX_DEPTH = 3;
     const visited = new Set([recvType]);
     let frontier = [recvType];
     for (let depth = 0; depth <= MAX_DEPTH && frontier.length; depth++) {
         for (const type of frontier) {
-            const candidates = ownerMethod.get(`${type}.${name}`);
-            if (!candidates || candidates.length === 0)
+            const all = ownerMethod.get(`${type}.${name}`);
+            if (!all || all.length === 0)
                 continue; // try next ancestor
+            const candidates = narrowByArity(all, argCount);
             if (candidates.length === 1) {
                 const c = candidates[0];
                 return { id: c.id, confidence: c.path === file ? "extracted" : "inferred" };
@@ -209,6 +270,41 @@ function resolveImport(spec, file, byId) {
             return c;
     return spec;
 }
+/**
+ * Resolve a Java import's fully-qualified type name to an in-repo file node;
+ * otherwise return the raw specifier (JDK or third-party type).
+ *
+ * Java names a *type*, not a path, and states no source root — `com.acme.Foo` may
+ * live under `src/main/java/`, `src/`, or a module dir. Matching on the path SUFFIX
+ * (`com/acme/Foo.java`) is therefore root-agnostic and needs no build-file parsing,
+ * which is what keeps this deterministic and dependency-free.
+ *
+ * `import static com.acme.Foo.bar` names a member, so when the full name misses, the
+ * last segment is dropped and the enclosing type retried. A wildcard (`com.acme.*`)
+ * names a package rather than one file and is deliberately left unresolved: picking a
+ * representative would invent an edge the source does not state.
+ *
+ * A suffix shared by two files (the same FQN under two source roots, e.g. a
+ * duplicated test tree) is ambiguous, so it stays unresolved rather than guessing.
+ */
+function resolveJavaImport(spec, filesBySuffix) {
+    const hit = (fqn) => {
+        const suffix = `${fqn.split(".").join("/")}.java`;
+        const files = filesBySuffix.get(suffix);
+        return files && files.length === 1 ? files[0] : null;
+    };
+    const direct = hit(spec);
+    if (direct)
+        return direct;
+    // `import static a.b.C.member` → retry as `a.b.C`.
+    const dot = spec.lastIndexOf(".");
+    if (dot > 0) {
+        const enclosing = hit(spec.slice(0, dot));
+        if (enclosing)
+            return enclosing;
+    }
+    return spec;
+}
 /**
  * Resolve a Go import package path to an in-repo file node when it points inside one of
  * the repo's modules; otherwise return the raw specifier (stdlib or third-party package).

package/dist/graph/resolve.js.map

@@ -1 +1 @@
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package/dist/graph/types.d.ts

@@ -40,6 +40,8 @@ export interface NodeV1 {
     body_hash: string;
     chars?: number;
     body_text?: string;
+    arity?: number;
+    variadic?: boolean;
     summary_state: SummaryState;
     summary: string | null;
     crux: Crux | null;

package/dist/graph/types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../src/graph/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,uFAAuF;AACvF,MAAM,MAAM,IAAI,GACZ,MAAM,GACN,OAAO,GACP,UAAU,GACV,QAAQ,GACR,WAAW,GACX,MAAM,GACN,MAAM,GACN,QAAQ,GAMR,QAAQ,GACR,UAAU,GACV,UAAU,CAAC;AAEf;;;;;yBAKyB;AACzB,MAAM,MAAM,UAAU,GAAG,cAAc,GAAG,cAAc,GAAG,WAAW,GAAG,UAAU,CAAC;AAEpF,kEAAkE;AAClE,MAAM,MAAM,YAAY,GAAG,SAAS,GAAG,OAAO,GAAG,OAAO,CAAC;AAEzD;4EAC4E;AAC5E,MAAM,WAAW,IAAI;IACnB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,MAAM;IAErB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,IAAI,CAAC;IAKX,KAAK,CAAC,EAAE,MAAM,CAAC;IAGf,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,OAAO,CAAC;IAIlB,MAAM,EAAE,KAAK,GAAG,SAAS,CAAC;IAC1B,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,CAAC,EAAE,MAAM,CAAC;IAEf,SAAS,CAAC,EAAE,MAAM,CAAC;IAOnB,aAAa,EAAE,YAAY,CAAC;IAC5B,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,IAAI,EAAE,IAAI,GAAG,IAAI,CAAC;CACnB;AAED,MAAM,MAAM,QAAQ,GAChB,UAAU,GACV,OAAO,GACP,SAAS,GACT,YAAY,GACZ,YAAY,GACZ,SAAS,CAAC;AAEd,MAAM,WAAW,MAAM;IACrB,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,QAAQ,CAAC;IACnB,UAAU,EAAE,UAAU,CAAC;CACxB;AAED;;;mFAGmF;AACnF,MAAM,WAAW,OAAO;IACtB,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;CACnB;AAED,MAAM,WAAW,OAAO;IACtB,IAAI,EAAE;QACJ,OAAO,EAAE,CAAC,CAAC;QACX,SAAS,EAAE,MAAM,CAAC;QAClB,SAAS,EAAE,MAAM,CAAC;QAClB,SAAS,EAAE,MAAM,EAAE,CAAC;QACpB;8FACsF;QACtF,MAAM,CAAC,EAAE,OAAO,EAAE,CAAC;KACpB,CAAC;IACF,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB"}
+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../src/graph/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,uFAAuF;AACvF,MAAM,MAAM,IAAI,GACZ,MAAM,GACN,OAAO,GACP,UAAU,GACV,QAAQ,GACR,WAAW,GACX,MAAM,GACN,MAAM,GACN,QAAQ,GAMR,QAAQ,GACR,UAAU,GACV,UAAU,CAAC;AAEf;;;;;yBAKyB;AACzB,MAAM,MAAM,UAAU,GAAG,cAAc,GAAG,cAAc,GAAG,WAAW,GAAG,UAAU,CAAC;AAEpF,kEAAkE;AAClE,MAAM,MAAM,YAAY,GAAG,SAAS,GAAG,OAAO,GAAG,OAAO,CAAC;AAEzD;4EAC4E;AAC5E,MAAM,WAAW,IAAI;IACnB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,MAAM;IAErB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,IAAI,CAAC;IAKX,KAAK,CAAC,EAAE,MAAM,CAAC;IAGf,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,OAAO,CAAC;IAIlB,MAAM,EAAE,KAAK,GAAG,SAAS,CAAC;IAC1B,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,CAAC,EAAE,MAAM,CAAC;IAEf,SAAS,CAAC,EAAE,MAAM,CAAC;IAKnB,KAAK,CAAC,EAAE,MAAM,CAAC;IAMf,QAAQ,CAAC,EAAE,OAAO,CAAC;IAInB,aAAa,EAAE,YAAY,CAAC;IAC5B,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,IAAI,EAAE,IAAI,GAAG,IAAI,CAAC;CACnB;AAED,MAAM,MAAM,QAAQ,GAChB,UAAU,GACV,OAAO,GACP,SAAS,GACT,YAAY,GACZ,YAAY,GACZ,SAAS,CAAC;AAEd,MAAM,WAAW,MAAM;IACrB,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,QAAQ,CAAC;IACnB,UAAU,EAAE,UAAU,CAAC;CACxB;AAED;;;mFAGmF;AACnF,MAAM,WAAW,OAAO;IACtB,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;CACnB;AAED,MAAM,WAAW,OAAO;IACtB,IAAI,EAAE;QACJ,OAAO,EAAE,CAAC,CAAC;QACX,SAAS,EAAE,MAAM,CAAC;QAClB,SAAS,EAAE,MAAM,CAAC;QAClB,SAAS,EAAE,MAAM,EAAE,CAAC;QACpB;8FACsF;QACtF,MAAM,CAAC,EAAE,OAAO,EAAE,CAAC;KACpB,CAAC;IACF,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB"}

package/dist/hosts/codex-hooks.d.ts

@@ -6,9 +6,9 @@ export interface HookWrite {
 }
 /**
  * The files installing the Codex hook would touch — pure, no writes. Both live
- * under `~/.codex`, so both are scoped 'global': the PostToolUse entry fires on
- * every edit in every repo opened with Codex, not just this one. Empty when the
- * CLI isn't installed, mirroring `installCodexHooks`' early return.
+ * under `~/.codex`, so both are scoped 'global': the hook entries fire in every
+ * repo opened with Codex, not just this one. Empty when the CLI isn't installed,
+ * mirroring `installCodexHooks`' early return.
  */
 export declare function hookTargets(home: string): PlannedWrite[];
 export declare function installCodexHooks(home: string): HookWrite[];

package/dist/hosts/codex-hooks.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"codex-hooks.d.ts","sourceRoot":"","sources":["../../src/hosts/codex-hooks.ts"],"names":[],"mappings":"AASA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,WAAW,CAAC;AAE9C,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,SAAS,GAAG,SAAS,GAAG,WAAW,GAAG,qBAAqB,CAAC;CACrE;AAMD;;;;;GAKG;AACH,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,YAAY,EAAE,CAexD;AAkBD,wBAAgB,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,EAAE,CAqC3D"}
+{"version":3,"file":"codex-hooks.d.ts","sourceRoot":"","sources":["../../src/hosts/codex-hooks.ts"],"names":[],"mappings":"AASA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,WAAW,CAAC;AAE9C,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,SAAS,GAAG,SAAS,GAAG,WAAW,GAAG,qBAAqB,CAAC;CACrE;AAMD;;;;;GAKG;AACH,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,YAAY,EAAE,CAexD;AAuCD,wBAAgB,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,EAAE,CAgC3D"}

package/dist/hosts/codex-hooks.js

@@ -17,9 +17,9 @@ function dirExists(p) {
 }
 /**
  * The files installing the Codex hook would touch — pure, no writes. Both live
- * under `~/.codex`, so both are scoped 'global': the PostToolUse entry fires on
- * every edit in every repo opened with Codex, not just this one. Empty when the
- * CLI isn't installed, mirroring `installCodexHooks`' early return.
+ * under `~/.codex`, so both are scoped 'global': the hook entries fire in every
+ * repo opened with Codex, not just this one. Empty when the CLI isn't installed,
+ * mirroring `installCodexHooks`' early return.
  */
 export function hookTargets(home) {
     const base = join(home, '.codex');
@@ -34,7 +34,7 @@ export function hookTargets(home) {
         {
             hostId: 'agents', id: 'codex-hooks',
             path: join(base, 'hooks.json'),
-            scope: 'global', kind: 'hook', what: 'PostToolUse: Write|Edit|MultiEdit',
+            scope: 'global', kind: 'hook', what: 'SessionStart / UserPromptSubmit / PostToolUse / Stop',
         },
     ];
 }
@@ -54,12 +54,21 @@ function writeOwned(id, path, content, mode) {
 function isGraftEntry(entry) {
     return JSON.stringify(entry).includes('graft-hooks.cjs');
 }
+function desiredEntries() {
+    return [
+        { event: 'SessionStart', matcher: 'startup|resume|compact', sub: 'session-start', timeout: 10000 },
+        { event: 'UserPromptSubmit', sub: 'prompt', timeout: 15000 },
+        { event: 'PostToolUse', matcher: 'apply_patch|Write|Edit|MultiEdit', sub: 'post-edit', timeout: 10000 },
+        { event: 'Stop', sub: 'stop', timeout: 10000 },
+    ];
+}
 export function installCodexHooks(home) {
     const targets = hookTargets(home);
     if (targets.length === 0)
         return [];
     const shimPath = targets[0].path;
     const shimWrite = writeOwned('codex-hook-shim', shimPath, hooksShim(claudeDistDir()), 0o755);
+    const skipped = { id: 'codex-hooks', path: targets[1].path, action: 'skipped-unparseable' };
     const cfgPath = targets[1].path;
     let root = {};
     const existed = existsSync(cfgPath);
@@ -68,28 +77,25 @@ export function installCodexHooks(home) {
             root = JSON.parse(readFileSync(cfgPath, 'utf8'));
         }
         catch {
-            return [shimWrite, { id: 'codex-hooks', path: cfgPath, action: 'skipped-unparseable' }];
+            return [shimWrite, skipped];
         }
     }
-    if (typeof root !== 'object' || root === null || Array.isArray(root)) {
-        return [shimWrite, { id: 'codex-hooks', path: cfgPath, action: 'skipped-unparseable' }];
-    }
+    if (typeof root !== 'object' || root === null || Array.isArray(root))
+        return [shimWrite, skipped];
     const before = JSON.stringify(root);
     const hooks = (root.hooks ??= {});
-    if (typeof hooks !== 'object' || hooks === null || Array.isArray(hooks)) {
-        return [shimWrite, { id: 'codex-hooks', path: cfgPath, action: 'skipped-unparseable' }];
+    if (typeof hooks !== 'object' || hooks === null || Array.isArray(hooks))
+        return [shimWrite, skipped];
+    for (const d of desiredEntries()) {
+        if (hooks[d.event] !== undefined && !Array.isArray(hooks[d.event]))
+            return [shimWrite, skipped];
+        const prior = Array.isArray(hooks[d.event]) ? hooks[d.event] : [];
+        const handler = { type: 'command', command: `node "${shimPath}" ${d.sub}`, timeout: d.timeout };
+        const entry = d.matcher ? { matcher: d.matcher, hooks: [handler] } : { hooks: [handler] };
+        // Preserve foreign entries in this event; replace any prior graft entry so an
+        // upgrade re-points to the current shim/sub-command instead of stacking.
+        hooks[d.event] = [...prior.filter((e) => !isGraftEntry(e)), entry];
     }
-    if (hooks.PostToolUse !== undefined && !Array.isArray(hooks.PostToolUse)) {
-        return [shimWrite, { id: 'codex-hooks', path: cfgPath, action: 'skipped-unparseable' }];
-    }
-    const prior = Array.isArray(hooks.PostToolUse) ? hooks.PostToolUse : [];
-    hooks.PostToolUse = [
-        ...prior.filter((e) => !isGraftEntry(e)),
-        {
-            matcher: 'Write|Edit|MultiEdit',
-            hooks: [{ type: 'command', command: `node "${shimPath}" post-edit-sync`, timeout: 10000 }],
-        },
-    ];
     if (JSON.stringify(root) === before)
         return [shimWrite, { id: 'codex-hooks', path: cfgPath, action: 'unchanged' }];
     writeFileSync(cfgPath, `${JSON.stringify(root, null, 2)}\n`);

package/dist/hosts/codex-hooks.js.map

@@ -1 +1 @@
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+{"version":3,"file":"codex-hooks.js","sourceRoot":"","sources":["../../src/hosts/codex-hooks.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,OAAO,EAAE,YAAY,EAAE,aAAa,EAAE,SAAS,EAAE,UAAU,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AAClG,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,oBAAoB,CAAC;AASnD,SAAS,SAAS,CAAC,CAAS;IAC1B,IAAI,CAAC;QAAC,OAAO,QAAQ,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC;IAAC,CAAC;IAAC,MAAM,CAAC;QAAC,OAAO,KAAK,CAAC;IAAC,CAAC;AACnE,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,WAAW,CAAC,IAAY;IACtC,MAAM,IAAI,GAAG,IAAI,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC;IAClC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC;QAAE,OAAO,EAAE,CAAC;IAChC,OAAO;QACL;YACE,MAAM,EAAE,QAAQ,EAAE,EAAE,EAAE,iBAAiB;YACvC,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,OAAO,EAAE,OAAO,EAAE,iBAAiB,CAAC;YACrD,KAAK,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,qBAAqB;SAC3D;QACD;YACE,MAAM,EAAE,QAAQ,EAAE,EAAE,EAAE,aAAa;YACnC,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,YAAY,CAAC;YAC9B,KAAK,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,sDAAsD;SAC5F;KACF,CAAC;AACJ,CAAC;AAED,SAAS,UAAU,CAAC,EAAU,EAAE,IAAY,EAAE,OAAe,EAAE,IAAa;IAC1E,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,OAAO,IAAI,YAAY,CAAC,IAAI,EAAE,MAAM,CAAC,KAAK,OAAO,EAAE,CAAC;QACtD,IAAI,IAAI,KAAK,SAAS,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,IAAI,GAAG,KAAK,CAAC,KAAK,IAAI;YAAE,SAAS,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC;QACxF,OAAO,EAAE,EAAE,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,CAAC;IAC3C,CAAC;IACD,SAAS,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IAC9C,aAAa,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC;IAC7B,IAAI,IAAI,KAAK,SAAS;QAAE,SAAS,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC;IAC9C,OAAO,EAAE,EAAE,EAAE,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,EAAE,CAAC;AAC/D,CAAC;AAED,SAAS,YAAY,CAAC,KAAc;IAClC,OAAO,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC,QAAQ,CAAC,iBAAiB,CAAC,CAAC;AAC3D,CAAC;AAcD,SAAS,cAAc;IACrB,OAAO;QACL,EAAE,KAAK,EAAE,cAAc,EAAE,OAAO,EAAE,wBAAwB,EAAE,GAAG,EAAE,eAAe,EAAE,OAAO,EAAE,KAAK,EAAE;QAClG,EAAE,KAAK,EAAE,kBAAkB,EAAE,GAAG,EAAE,QAAQ,EAAE,OAAO,EAAE,KAAK,EAAE;QAC5D,EAAE,KAAK,EAAE,aAAa,EAAE,OAAO,EAAE,kCAAkC,EAAE,GAAG,EAAE,WAAW,EAAE,OAAO,EAAE,KAAK,EAAE;QACvG,EAAE,KAAK,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE;KAC/C,CAAC;AACJ,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,IAAY;IAC5C,MAAM,OAAO,GAAG,WAAW,CAAC,IAAI,CAAC,CAAC;IAClC,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,EAAE,CAAC;IAEpC,MAAM,QAAQ,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IACjC,MAAM,SAAS,GAAG,UAAU,CAAC,iBAAiB,EAAE,QAAQ,EAAE,SAAS,CAAC,aAAa,EAAE,CAAC,EAAE,KAAK,CAAC,CAAC;IAC7F,MAAM,OAAO,GAAc,EAAE,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,EAAE,qBAAqB,EAAE,CAAC;IAEvG,MAAM,OAAO,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IAChC,IAAI,IAAI,GAAwB,EAAE,CAAC;IACnC,MAAM,OAAO,GAAG,UAAU,CAAC,OAAO,CAAC,CAAC;IACpC,IAAI,OAAO,EAAE,CAAC;QACZ,IAAI,CAAC;YAAC,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC,CAAC;QAAC,CAAC;QAAC,MAAM,CAAC;YAAC,OAAO,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QAAC,CAAC;IAClG,CAAC;IACD,IAAI,OAAO,IAAI,KAAK,QAAQ,IAAI,IAAI,KAAK,IAAI,IAAI,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;IAClG,MAAM,MAAM,GAAG,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC;IACpC,MAAM,KAAK,GAAG,CAAC,IAAI,CAAC,KAAK,KAAK,EAAE,CAAC,CAAC;IAClC,IAAI,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,KAAK,IAAI,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC;QAAE,OAAO,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;IAErG,KAAK,MAAM,CAAC,IAAI,cAAc,EAAE,EAAE,CAAC;QACjC,IAAI,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,KAAK,SAAS,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAAE,OAAO,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QAChG,MAAM,KAAK,GAAc,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;QAC7E,MAAM,OAAO,GAAG,EAAE,IAAI,EAAE,SAAS,EAAE,OAAO,EAAE,SAAS,QAAQ,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE,OAAO,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC;QAChG,MAAM,KAAK,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,OAAO,EAAE,KAAK,EAAE,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,CAAC,OAAO,CAAC,EAAE,CAAC;QAC1F,8EAA8E;QAC9E,yEAAyE;QACzE,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,GAAG,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;IACrE,CAAC;IAED,IAAI,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,MAAM;QAAE,OAAO,CAAC,SAAS,EAAE,EAAE,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,CAAC,CAAC;IACnH,aAAa,CAAC,OAAO,EAAE,GAAG,IAAI,CAAC,SAAS,CAAC,IAAI,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC;IAC7D,OAAO,CAAC,SAAS,EAAE,EAAE,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,EAAE,CAAC,CAAC;AACpG,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@nanonets/graft",
-  "version": "0.10.0",
+  "version": "0.10.1",
   "description": "Build a repo's context graph as a folder of linked markdown files that live in the repo and stay in sync with the code through git.",
   "keywords": [
     "ai",
@@ -62,6 +62,7 @@
     "openai": "^6.45.0",
     "tree-sitter": "^0.21.1",
     "tree-sitter-go": "^0.23.4",
+    "tree-sitter-java": "^0.23.5",
     "tree-sitter-python": "^0.21.0",
     "tree-sitter-typescript": "^0.23.2",
     "tree-sitter-wasms": "^0.1.13",
@@ -76,5 +77,13 @@
     "esbuild": "^0.28.1",
     "tsx": "^4.22.4",
     "typescript": "^6.0.3"
+  },
+  "allowScripts": {
+    "tree-sitter@0.21.1": true,
+    "tree-sitter-typescript@0.23.2": true,
+    "tree-sitter-python@0.21.0": true,
+    "tree-sitter-go@0.23.4": true,
+    "tree-sitter-javascript@0.23.1": true,
+    "tree-sitter-java@0.23.5": true
   }
 }