@myrialabs/clopen 0.0.4 → 0.0.6

package/backend/lib/database/migrations/011_git_like_commit_graph.ts

@@ -1,156 +1,156 @@
-/**
- * Migration: Git-Like Commit Graph System
- * Purpose: Implement parent-child relationships for messages (like git commits)
- *
- * Changes:
- * - Add parent_message_id to messages (commit parent pointer)
- * - Add current_head_message_id to chat_sessions (branch HEAD pointer)
- * - Build parent links from existing messages
- * - Clear old branch data (reset is_deleted, branch_id)
- * - Add branches table for tracking named branches
- */
-
-import type { DatabaseConnection } from '$shared/types/database/connection';
-
-import { debug } from '$shared/utils/logger';
-export const description = 'Implement git-like commit graph with parent relationships';
-
-export const up = (db: DatabaseConnection): void => {
-	debug.log('migration', '📋 Implementing git-like commit graph system...');
-
-	// 1. Add parent_message_id to messages table
-	db.exec(`
-		ALTER TABLE messages
-		ADD COLUMN parent_message_id TEXT
-	`);
-
-	// 2. Add current_head_message_id to chat_sessions table
-	db.exec(`
-		ALTER TABLE chat_sessions
-		ADD COLUMN current_head_message_id TEXT
-	`);
-
-	// 3. Create branches table for tracking named branches
-	db.exec(`
-		CREATE TABLE IF NOT EXISTS branches (
-			id TEXT PRIMARY KEY,
-			session_id TEXT NOT NULL,
-			branch_name TEXT NOT NULL,
-			head_message_id TEXT NOT NULL,
-			created_at TEXT NOT NULL,
-			FOREIGN KEY (session_id) REFERENCES chat_sessions(id) ON DELETE CASCADE,
-			FOREIGN KEY (head_message_id) REFERENCES messages(id) ON DELETE CASCADE
-		)
-	`);
-
-	// 4. Build parent links for existing messages (by timestamp order per session)
-	debug.log('migration', '🔗 Building parent links from existing messages...');
-
-	const sessions = db.prepare('SELECT DISTINCT session_id FROM messages').all() as { session_id: string }[];
-
-	for (const { session_id } of sessions) {
-		// Get all active messages for this session, ordered by timestamp
-		const messages = db.prepare(`
-			SELECT id, timestamp
-			FROM messages
-			WHERE session_id = ? AND (is_deleted IS NULL OR is_deleted = 0)
-			ORDER BY timestamp ASC
-		`).all(session_id) as { id: string; timestamp: string }[];
-
-		// Build parent links (each message points to previous message)
-		for (let i = 1; i < messages.length; i++) {
-			db.prepare(`
-				UPDATE messages
-				SET parent_message_id = ?
-				WHERE id = ?
-			`).run(messages[i - 1].id, messages[i].id);
-		}
-
-		// Set session HEAD to last message
-		if (messages.length > 0) {
-			const lastMessage = messages[messages.length - 1];
-			db.prepare(`
-				UPDATE chat_sessions
-				SET current_head_message_id = ?
-				WHERE id = ?
-			`).run(lastMessage.id, session_id);
-		}
-
-		debug.log('migration', `  ✓ Built ${messages.length - 1} parent links for session ${session_id}`);
-	}
-
-	// 5. Clear old branch data (fresh start)
-	debug.log('migration', '🧹 Clearing old branch data...');
-
-	// Reset all is_deleted to 0 (all messages visible again)
-	db.exec(`
-		UPDATE messages
-		SET is_deleted = 0
-		WHERE is_deleted = 1
-	`);
-
-	// Clear all branch_id (will be reassigned on undo)
-	db.exec(`
-		UPDATE messages
-		SET branch_id = NULL
-		WHERE branch_id IS NOT NULL
-	`);
-
-	// Clear snapshot soft deletes
-	db.exec(`
-		UPDATE message_snapshots
-		SET is_deleted = 0
-		WHERE is_deleted = 1
-	`);
-
-	db.exec(`
-		UPDATE message_snapshots
-		SET branch_id = NULL
-		WHERE branch_id IS NOT NULL
-	`);
-
-	// 6. Create indexes for fast graph traversal
-	db.exec(`
-		CREATE INDEX idx_messages_parent_id ON messages(parent_message_id)
-	`);
-
-	db.exec(`
-		CREATE INDEX idx_messages_session_parent ON messages(session_id, parent_message_id)
-	`);
-
-	db.exec(`
-		CREATE INDEX idx_branches_session ON branches(session_id)
-	`);
-
-	db.exec(`
-		CREATE INDEX idx_branches_head ON branches(head_message_id)
-	`);
-
-	db.exec(`
-		CREATE INDEX idx_chat_sessions_head ON chat_sessions(current_head_message_id)
-	`);
-
-	debug.log('migration', '✅ Git-like commit graph system implemented successfully!');
-	debug.log('migration', '   📊 All existing messages preserved with parent links');
-	debug.log('migration', '   🔄 Old branch data cleared (fresh start)');
-};
-
-export const down = (db: DatabaseConnection): void => {
-	debug.log('migration', '🗑️ Removing git-like commit graph system...');
-
-	// Drop indexes
-	db.exec('DROP INDEX IF EXISTS idx_chat_sessions_head');
-	db.exec('DROP INDEX IF EXISTS idx_branches_head');
-	db.exec('DROP INDEX IF EXISTS idx_branches_session');
-	db.exec('DROP INDEX IF EXISTS idx_messages_session_parent');
-	db.exec('DROP INDEX IF EXISTS idx_messages_parent_id');
-
-	// Drop branches table
-	db.exec('DROP TABLE IF EXISTS branches');
-
-	// Note: SQLite doesn't support DROP COLUMN easily
-	// Columns parent_message_id and current_head_message_id remain but unused
-	debug.warn('migration', '⚠️ Columns parent_message_id and current_head_message_id remain but unused');
-
-	debug.log('migration', '✅ Git-like commit graph system rollback completed');
-};
+/**
+ * Migration: Git-Like Commit Graph System
+ * Purpose: Implement parent-child relationships for messages (like git commits)
+ *
+ * Changes:
+ * - Add parent_message_id to messages (commit parent pointer)
+ * - Add current_head_message_id to chat_sessions (branch HEAD pointer)
+ * - Build parent links from existing messages
+ * - Clear old branch data (reset is_deleted, branch_id)
+ * - Add branches table for tracking named branches
+ */
+
+import type { DatabaseConnection } from '$shared/types/database/connection';
+
+import { debug } from '$shared/utils/logger';
+export const description = 'Implement git-like commit graph with parent relationships';
+
+export const up = (db: DatabaseConnection): void => {
+	debug.log('migration', '📋 Implementing git-like commit graph system...');
+
+	// 1. Add parent_message_id to messages table
+	db.exec(`
+		ALTER TABLE messages
+		ADD COLUMN parent_message_id TEXT
+	`);
+
+	// 2. Add current_head_message_id to chat_sessions table
+	db.exec(`
+		ALTER TABLE chat_sessions
+		ADD COLUMN current_head_message_id TEXT
+	`);
+
+	// 3. Create branches table for tracking named branches
+	db.exec(`
+		CREATE TABLE IF NOT EXISTS branches (
+			id TEXT PRIMARY KEY,
+			session_id TEXT NOT NULL,
+			branch_name TEXT NOT NULL,
+			head_message_id TEXT NOT NULL,
+			created_at TEXT NOT NULL,
+			FOREIGN KEY (session_id) REFERENCES chat_sessions(id) ON DELETE CASCADE,
+			FOREIGN KEY (head_message_id) REFERENCES messages(id) ON DELETE CASCADE
+		)
+	`);
+
+	// 4. Build parent links for existing messages (by timestamp order per session)
+	debug.log('migration', '🔗 Building parent links from existing messages...');
+
+	const sessions = db.prepare('SELECT DISTINCT session_id FROM messages').all() as { session_id: string }[];
+
+	for (const { session_id } of sessions) {
+		// Get all active messages for this session, ordered by timestamp
+		const messages = db.prepare(`
+			SELECT id, timestamp
+			FROM messages
+			WHERE session_id = ? AND (is_deleted IS NULL OR is_deleted = 0)
+			ORDER BY timestamp ASC
+		`).all(session_id) as { id: string; timestamp: string }[];
+
+		// Build parent links (each message points to previous message)
+		for (let i = 1; i < messages.length; i++) {
+			db.prepare(`
+				UPDATE messages
+				SET parent_message_id = ?
+				WHERE id = ?
+			`).run(messages[i - 1].id, messages[i].id);
+		}
+
+		// Set session HEAD to last message
+		if (messages.length > 0) {
+			const lastMessage = messages[messages.length - 1];
+			db.prepare(`
+				UPDATE chat_sessions
+				SET current_head_message_id = ?
+				WHERE id = ?
+			`).run(lastMessage.id, session_id);
+		}
+
+		debug.log('migration', `  ✓ Built ${messages.length - 1} parent links for session ${session_id}`);
+	}
+
+	// 5. Clear old branch data (fresh start)
+	debug.log('migration', '🧹 Clearing old branch data...');
+
+	// Reset all is_deleted to 0 (all messages visible again)
+	db.exec(`
+		UPDATE messages
+		SET is_deleted = 0
+		WHERE is_deleted = 1
+	`);
+
+	// Clear all branch_id (will be reassigned on undo)
+	db.exec(`
+		UPDATE messages
+		SET branch_id = NULL
+		WHERE branch_id IS NOT NULL
+	`);
+
+	// Clear snapshot soft deletes
+	db.exec(`
+		UPDATE message_snapshots
+		SET is_deleted = 0
+		WHERE is_deleted = 1
+	`);
+
+	db.exec(`
+		UPDATE message_snapshots
+		SET branch_id = NULL
+		WHERE branch_id IS NOT NULL
+	`);
+
+	// 6. Create indexes for fast graph traversal
+	db.exec(`
+		CREATE INDEX idx_messages_parent_id ON messages(parent_message_id)
+	`);
+
+	db.exec(`
+		CREATE INDEX idx_messages_session_parent ON messages(session_id, parent_message_id)
+	`);
+
+	db.exec(`
+		CREATE INDEX idx_branches_session ON branches(session_id)
+	`);
+
+	db.exec(`
+		CREATE INDEX idx_branches_head ON branches(head_message_id)
+	`);
+
+	db.exec(`
+		CREATE INDEX idx_chat_sessions_head ON chat_sessions(current_head_message_id)
+	`);
+
+	debug.log('migration', '✅ Git-like commit graph system implemented successfully!');
+	debug.log('migration', '   📊 All existing messages preserved with parent links');
+	debug.log('migration', '   🔄 Old branch data cleared (fresh start)');
+};
+
+export const down = (db: DatabaseConnection): void => {
+	debug.log('migration', '🗑️ Removing git-like commit graph system...');
+
+	// Drop indexes
+	db.exec('DROP INDEX IF EXISTS idx_chat_sessions_head');
+	db.exec('DROP INDEX IF EXISTS idx_branches_head');
+	db.exec('DROP INDEX IF EXISTS idx_branches_session');
+	db.exec('DROP INDEX IF EXISTS idx_messages_session_parent');
+	db.exec('DROP INDEX IF EXISTS idx_messages_parent_id');
+
+	// Drop branches table
+	db.exec('DROP TABLE IF EXISTS branches');
+
+	// Note: SQLite doesn't support DROP COLUMN easily
+	// Columns parent_message_id and current_head_message_id remain but unused
+	debug.warn('migration', '⚠️ Columns parent_message_id and current_head_message_id remain but unused');
+
+	debug.log('migration', '✅ Git-like commit graph system rollback completed');
+};

package/backend/lib/database/migrations/012_add_file_change_statistics.ts

@@ -1,41 +1,41 @@
-/**
- * Migration: Add file change statistics to message snapshots
- * Purpose: Store git-like file change stats (files changed, insertions, deletions)
- */
-
-import type { DatabaseConnection } from '$shared/types/database/connection';
-import { debug } from '$shared/utils/logger';
-
-export const description = 'Add file change statistics to message snapshots';
-
-export const up = (db: DatabaseConnection): void => {
-	debug.log('migration', '📊 Adding file change statistics fields...');
-
-	// Add columns for file change statistics
-	db.exec(`
-		ALTER TABLE message_snapshots
-		ADD COLUMN files_changed INTEGER DEFAULT 0
-	`);
-
-	db.exec(`
-		ALTER TABLE message_snapshots
-		ADD COLUMN insertions INTEGER DEFAULT 0
-	`);
-
-	db.exec(`
-		ALTER TABLE message_snapshots
-		ADD COLUMN deletions INTEGER DEFAULT 0
-	`);
-
-	debug.log('migration', '✅ File change statistics fields added');
-};
-
-export const down = (db: DatabaseConnection): void => {
-	debug.log('migration', '🗑️ Removing file change statistics fields...');
-
-	// SQLite doesn't support DROP COLUMN easily, so we'd need to recreate table
-	// For now, this is a forward-only migration
-	debug.warn('migration', '⚠️ Rollback not implemented for file change statistics');
-
-	debug.log('migration', '✅ File change statistics rollback skipped');
-};
+/**
+ * Migration: Add file change statistics to message snapshots
+ * Purpose: Store git-like file change stats (files changed, insertions, deletions)
+ */
+
+import type { DatabaseConnection } from '$shared/types/database/connection';
+import { debug } from '$shared/utils/logger';
+
+export const description = 'Add file change statistics to message snapshots';
+
+export const up = (db: DatabaseConnection): void => {
+	debug.log('migration', '📊 Adding file change statistics fields...');
+
+	// Add columns for file change statistics
+	db.exec(`
+		ALTER TABLE message_snapshots
+		ADD COLUMN files_changed INTEGER DEFAULT 0
+	`);
+
+	db.exec(`
+		ALTER TABLE message_snapshots
+		ADD COLUMN insertions INTEGER DEFAULT 0
+	`);
+
+	db.exec(`
+		ALTER TABLE message_snapshots
+		ADD COLUMN deletions INTEGER DEFAULT 0
+	`);
+
+	debug.log('migration', '✅ File change statistics fields added');
+};
+
+export const down = (db: DatabaseConnection): void => {
+	debug.log('migration', '🗑️ Removing file change statistics fields...');
+
+	// SQLite doesn't support DROP COLUMN easily, so we'd need to recreate table
+	// For now, this is a forward-only migration
+	debug.warn('migration', '⚠️ Rollback not implemented for file change statistics');
+
+	debug.log('migration', '✅ File change statistics rollback skipped');
+};

package/backend/lib/database/migrations/013_checkpoint_tree_state.ts

@@ -1,118 +1,118 @@
-/**
- * Migration: Checkpoint Tree State
- * Purpose: Track active child per checkpoint for tree display ordering.
- * This replaces the fragile branch_id-based approach with a clean
- * parent-child tracking mechanism.
- */
-
-import type { DatabaseConnection } from '$shared/types/database/connection';
-import { debug } from '$shared/utils/logger';
-
-export const description = 'Add checkpoint tree state for display ordering';
-
-export const up = (db: DatabaseConnection): void => {
-	debug.log('migration', '📋 Creating checkpoint_tree_state table...');
-
-	// Track which child checkpoint continues the "main line" (straight)
-	// at each branch point. This is used for tree display ordering.
-	db.exec(`
-		CREATE TABLE IF NOT EXISTS checkpoint_tree_state (
-			session_id TEXT NOT NULL,
-			parent_checkpoint_id TEXT NOT NULL,
-			active_child_id TEXT NOT NULL,
-			PRIMARY KEY (session_id, parent_checkpoint_id)
-		)
-	`);
-
-	db.exec(`
-		CREATE INDEX IF NOT EXISTS idx_checkpoint_tree_session
-		ON checkpoint_tree_state(session_id)
-	`);
-
-	// Initialize checkpoint_tree_state for existing sessions
-	// by analyzing HEAD path relationships
-	debug.log('migration', '🔗 Initializing tree state from existing sessions...');
-
-	const sessions = db.prepare(`
-		SELECT id, current_head_message_id FROM chat_sessions
-		WHERE current_head_message_id IS NOT NULL
-	`).all() as { id: string; current_head_message_id: string }[];
-
-	for (const session of sessions) {
-		try {
-			// Walk HEAD path from head to root
-			const path: string[] = [];
-			let currentId: string | null = session.current_head_message_id;
-
-			while (currentId) {
-				path.unshift(currentId);
-				const msg = db.prepare(`
-					SELECT parent_message_id FROM messages WHERE id = ?
-				`).get(currentId) as { parent_message_id: string | null } | null;
-				if (!msg) break;
-				currentId = msg.parent_message_id || null;
-			}
-
-			// Find checkpoint messages (user messages with text, not tool confirmations)
-			const checkpointsOnPath: string[] = [];
-			for (const msgId of path) {
-				const msg = db.prepare(`
-					SELECT sdk_message FROM messages WHERE id = ?
-				`).get(msgId) as { sdk_message: string } | null;
-				if (!msg) continue;
-
-				try {
-					const sdk = JSON.parse(msg.sdk_message);
-					if (sdk.type !== 'user') continue;
-
-					// Check if it's a tool confirmation (not a real user message)
-					const content = sdk.message?.content;
-					if (Array.isArray(content) && content.some((b: any) => b.type === 'tool_result')) {
-						continue;
-					}
-
-					// Check if it has text
-					let hasText = false;
-					if (typeof content === 'string' && content.trim()) {
-						hasText = true;
-					} else if (Array.isArray(content)) {
-						hasText = content.some((b: any) => typeof b === 'object' && 'text' in b && b.text?.trim());
-					}
-
-					if (hasText) {
-						checkpointsOnPath.push(msgId);
-					}
-				} catch {
-					// Skip unparseable messages
-				}
-			}
-
-			// Set active child for consecutive checkpoints on the path
-			for (let i = 0; i < checkpointsOnPath.length - 1; i++) {
-				const parentCp = checkpointsOnPath[i];
-				const childCp = checkpointsOnPath[i + 1];
-
-				db.prepare(`
-					INSERT OR REPLACE INTO checkpoint_tree_state
-					(session_id, parent_checkpoint_id, active_child_id)
-					VALUES (?, ?, ?)
-				`).run(session.id, parentCp, childCp);
-			}
-
-			if (checkpointsOnPath.length > 1) {
-				debug.log('migration', `  ✓ Session ${session.id}: ${checkpointsOnPath.length - 1} active child links`);
-			}
-		} catch (err) {
-			debug.warn('migration', `  ⚠ Could not process session ${session.id}: ${err}`);
-		}
-	}
-
-	debug.log('migration', '✅ Checkpoint tree state created');
-};
-
-export const down = (db: DatabaseConnection): void => {
-	debug.log('migration', '🗑️ Removing checkpoint tree state...');
-	db.exec('DROP INDEX IF EXISTS idx_checkpoint_tree_session');
-	db.exec('DROP TABLE IF EXISTS checkpoint_tree_state');
-	debug.log('migration', '✅ Checkpoint tree state removed');
-};
+/**
+ * Migration: Checkpoint Tree State
+ * Purpose: Track active child per checkpoint for tree display ordering.
+ * This replaces the fragile branch_id-based approach with a clean
+ * parent-child tracking mechanism.
+ */
+
+import type { DatabaseConnection } from '$shared/types/database/connection';
+import { debug } from '$shared/utils/logger';
+
+export const description = 'Add checkpoint tree state for display ordering';
+
+export const up = (db: DatabaseConnection): void => {
+	debug.log('migration', '📋 Creating checkpoint_tree_state table...');
+
+	// Track which child checkpoint continues the "main line" (straight)
+	// at each branch point. This is used for tree display ordering.
+	db.exec(`
+		CREATE TABLE IF NOT EXISTS checkpoint_tree_state (
+			session_id TEXT NOT NULL,
+			parent_checkpoint_id TEXT NOT NULL,
+			active_child_id TEXT NOT NULL,
+			PRIMARY KEY (session_id, parent_checkpoint_id)
+		)
+	`);
+
+	db.exec(`
+		CREATE INDEX IF NOT EXISTS idx_checkpoint_tree_session
+		ON checkpoint_tree_state(session_id)
+	`);
+
+	// Initialize checkpoint_tree_state for existing sessions
+	// by analyzing HEAD path relationships
+	debug.log('migration', '🔗 Initializing tree state from existing sessions...');
+
+	const sessions = db.prepare(`
+		SELECT id, current_head_message_id FROM chat_sessions
+		WHERE current_head_message_id IS NOT NULL
+	`).all() as { id: string; current_head_message_id: string }[];
+
+	for (const session of sessions) {
+		try {
+			// Walk HEAD path from head to root
+			const path: string[] = [];
+			let currentId: string | null = session.current_head_message_id;
+
+			while (currentId) {
+				path.unshift(currentId);
+				const msg = db.prepare(`
+					SELECT parent_message_id FROM messages WHERE id = ?
+				`).get(currentId) as { parent_message_id: string | null } | null;
+				if (!msg) break;
+				currentId = msg.parent_message_id || null;
+			}
+
+			// Find checkpoint messages (user messages with text, not tool confirmations)
+			const checkpointsOnPath: string[] = [];
+			for (const msgId of path) {
+				const msg = db.prepare(`
+					SELECT sdk_message FROM messages WHERE id = ?
+				`).get(msgId) as { sdk_message: string } | null;
+				if (!msg) continue;
+
+				try {
+					const sdk = JSON.parse(msg.sdk_message);
+					if (sdk.type !== 'user') continue;
+
+					// Check if it's a tool confirmation (not a real user message)
+					const content = sdk.message?.content;
+					if (Array.isArray(content) && content.some((b: any) => b.type === 'tool_result')) {
+						continue;
+					}
+
+					// Check if it has text
+					let hasText = false;
+					if (typeof content === 'string' && content.trim()) {
+						hasText = true;
+					} else if (Array.isArray(content)) {
+						hasText = content.some((b: any) => typeof b === 'object' && 'text' in b && b.text?.trim());
+					}
+
+					if (hasText) {
+						checkpointsOnPath.push(msgId);
+					}
+				} catch {
+					// Skip unparseable messages
+				}
+			}
+
+			// Set active child for consecutive checkpoints on the path
+			for (let i = 0; i < checkpointsOnPath.length - 1; i++) {
+				const parentCp = checkpointsOnPath[i];
+				const childCp = checkpointsOnPath[i + 1];
+
+				db.prepare(`
+					INSERT OR REPLACE INTO checkpoint_tree_state
+					(session_id, parent_checkpoint_id, active_child_id)
+					VALUES (?, ?, ?)
+				`).run(session.id, parentCp, childCp);
+			}
+
+			if (checkpointsOnPath.length > 1) {
+				debug.log('migration', `  ✓ Session ${session.id}: ${checkpointsOnPath.length - 1} active child links`);
+			}
+		} catch (err) {
+			debug.warn('migration', `  ⚠ Could not process session ${session.id}: ${err}`);
+		}
+	}
+
+	debug.log('migration', '✅ Checkpoint tree state created');
+};
+
+export const down = (db: DatabaseConnection): void => {
+	debug.log('migration', '🗑️ Removing checkpoint tree state...');
+	db.exec('DROP INDEX IF EXISTS idx_checkpoint_tree_session');
+	db.exec('DROP TABLE IF EXISTS checkpoint_tree_state');
+	debug.log('migration', '✅ Checkpoint tree state removed');
+};

package/backend/lib/database/migrations/014_add_engine_to_sessions.ts

@@ -1,18 +1,18 @@
-import type { DatabaseConnection } from '$shared/types/database/connection';
-
-import { debug } from '$shared/utils/logger';
-export const description = 'Add engine column to chat_sessions table for multi-engine support';
-
-export const up = (db: DatabaseConnection): void => {
-	debug.log('migration', '🔧 Adding engine column to chat_sessions...');
-
-	db.exec(`
-		ALTER TABLE chat_sessions ADD COLUMN engine TEXT DEFAULT 'claude-code'
-	`);
-
-	debug.log('migration', '✅ Engine column added to chat_sessions');
-};
-
-export const down = (db: DatabaseConnection): void => {
-	debug.log('migration', '🗑️ SQLite does not support DROP COLUMN directly, skipping...');
-};
+import type { DatabaseConnection } from '$shared/types/database/connection';
+
+import { debug } from '$shared/utils/logger';
+export const description = 'Add engine column to chat_sessions table for multi-engine support';
+
+export const up = (db: DatabaseConnection): void => {
+	debug.log('migration', '🔧 Adding engine column to chat_sessions...');
+
+	db.exec(`
+		ALTER TABLE chat_sessions ADD COLUMN engine TEXT DEFAULT 'claude-code'
+	`);
+
+	debug.log('migration', '✅ Engine column added to chat_sessions');
+};
+
+export const down = (db: DatabaseConnection): void => {
+	debug.log('migration', '🗑️ SQLite does not support DROP COLUMN directly, skipping...');
+};