@mycelish/cli 0.2.8 → 0.3.0

package/dist/dashboard/assets/xychartDiagram-PRI3JC2R-C8fn_Zm6.js

@@ -0,0 +1,7 @@
+import{s as gi,g as xi,p as Xt,o as di,a as fi,b as pi,_ as a,l as Nt,G as mi,d as yi,x as bi,E as St,h as Ai,C as Yt,D as wi,I as Ci,az as Si,Q as Wt}from"./mermaid.core-DY8Lk9ir.js";import"./index-Dr2pvJml.js";import{i as _i}from"./init-Gi6I4Gst.js";import{o as ki}from"./ordinal-Cboi1Yqb.js";import{l as zt}from"./linear-BEr0iAwY.js";import"./defaultLocale-DX6XiGOO.js";function Ri(e,t,i){e=+e,t=+t,i=(n=arguments.length)<2?(t=e,e=0,1):n<3?1:+i;for(var s=-1,n=Math.max(0,Math.ceil((t-e)/i))|0,o=new Array(n);++s<n;)o[s]=e+s*i;return o}function yt(){var e=ki().unknown(void 0),t=e.domain,i=e.range,s=0,n=1,o,g,m=!1,p=0,k=0,v=.5;delete e.unknown;function C(){var b=t().length,E=n<s,D=E?n:s,P=E?s:n;o=(P-D)/Math.max(1,b-p+k*2),m&&(o=Math.floor(o)),D+=(P-D-o*(b-p))*v,g=o*(1-p),m&&(D=Math.round(D),g=Math.round(g));var I=Ri(b).map(function(y){return D+o*y});return i(E?I.reverse():I)}return e.domain=function(b){return arguments.length?(t(b),C()):t()},e.range=function(b){return arguments.length?([s,n]=b,s=+s,n=+n,C()):[s,n]},e.rangeRound=function(b){return[s,n]=b,s=+s,n=+n,m=!0,C()},e.bandwidth=function(){return g},e.step=function(){return o},e.round=function(b){return arguments.length?(m=!!b,C()):m},e.padding=function(b){return arguments.length?(p=Math.min(1,k=+b),C()):p},e.paddingInner=function(b){return arguments.length?(p=Math.min(1,b),C()):p},e.paddingOuter=function(b){return arguments.length?(k=+b,C()):k},e.align=function(b){return arguments.length?(v=Math.max(0,Math.min(1,b)),C()):v},e.copy=function(){return yt(t(),[s,n]).round(m).paddingInner(p).paddingOuter(k).align(v)},_i.apply(C(),arguments)}var bt=(function(){var e=a(function(O,h,u,x){for(u=u||{},x=O.length;x--;u[O[x]]=h);return 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33:d.setYAxisRangeData(Number(r[f-2]),Number(r[f]));break;case 37:this.$={text:r[f],type:"text"};break;case 38:this.$={text:r[f],type:"text"};break;case 39:this.$={text:r[f],type:"markdown"};break;case 40:this.$=r[f];break;case 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+`+T.showPosition()+`
+Expecting `+ut.join(", ")+", got '"+(this.terminals_[M]||M)+"'":mt="Parse error on line "+(lt+1)+": Unexpected "+(M==Mt?"end of input":"'"+(this.terminals_[M]||M)+"'"),this.parseError(mt,{text:T.match,token:this.terminals_[M]||M,line:T.yylineno,loc:ft,expected:ut})}if(B[0]instanceof Array&&B.length>1)throw new Error("Parse Error: multiple actions possible at state: "+H+", token: "+M);switch(B[0]){case 1:x.push(M),w.push(T.yytext),r.push(T.yylloc),x.push(B[1]),M=null,It=T.yyleng,f=T.yytext,lt=T.yylineno,ft=T.yylloc;break;case 2:if(F=this.productions_[B[1]][1],G.$=w[w.length-F],G._$={first_line:r[r.length-(F||1)].first_line,last_line:r[r.length-1].last_line,first_column:r[r.length-(F||1)].first_column,last_column:r[r.length-1].last_column},ci&&(G._$.range=[r[r.length-(F||1)].range[0],r[r.length-1].range[1]]),pt=this.performAction.apply(G,[f,It,lt,Y.yy,B[1],w,r].concat(li)),typeof pt<"u")return pt;F&&(x=x.slice(0,-1*F*2),w=w.slice(0,-1*F),r=r.slice(0,-1*F)),x.push(this.productions_[B[1]][0]),w.push(G.$),r.push(G._$),Bt=at[x[x.length-2]][x[x.length-1]],x.push(Bt);break;case 3:return!0}}return!0},"parse")},Et=(function(){var O={EOF:1,parseError:a(function(u,x){if(this.yy.parser)this.yy.parser.parseError(u,x);else throw new Error(u)},"parseError"),setInput:a(function(h,u){return this.yy=u||this.yy||{},this._input=h,this._more=this._backtrack=this.done=!1,this.yylineno=this.yyleng=0,this.yytext=this.matched=this.match="",this.conditionStack=["INITIAL"],this.yylloc={first_line:1,first_column:0,last_line:1,last_column:0},this.options.ranges&&(this.yylloc.range=[0,0]),this.offset=0,this},"setInput"),input:a(function(){var h=this._input[0];this.yytext+=h,this.yyleng++,this.offset++,this.match+=h,this.matched+=h;var u=h.match(/(?:\r\n?|\n).*/g);return u?(this.yylineno++,this.yylloc.last_line++):this.yylloc.last_column++,this.options.ranges&&this.yylloc.range[1]++,this._input=this._input.slice(1),h},"input"),unput:a(function(h){var u=h.length,x=h.split(/(?:\r\n?|\n)/g);this._input=h+this._input,this.yytext=this.yytext.substr(0,this.yytext.length-u),this.offset-=u;var d=this.match.split(/(?:\r\n?|\n)/g);this.match=this.match.substr(0,this.match.length-1),this.matched=this.matched.substr(0,this.matched.length-1),x.length-1&&(this.yylineno-=x.length-1);var w=this.yylloc.range;return this.yylloc={first_line:this.yylloc.first_line,last_line:this.yylineno+1,first_column:this.yylloc.first_column,last_column:x?(x.length===d.length?this.yylloc.first_column:0)+d[d.length-x.length].length-x[0].length:this.yylloc.first_column-u},this.options.ranges&&(this.yylloc.range=[w[0],w[0]+this.yyleng-u]),this.yyleng=this.yytext.length,this},"unput"),more:a(function(){return this._more=!0,this},"more"),reject:a(function(){if(this.options.backtrack_lexer)this._backtrack=!0;else return this.parseError("Lexical error on line "+(this.yylineno+1)+`. You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true).
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this.textDimensionCalculator.getMaxDimension(this.getTickValues().map(t=>t.toString()),this.axisConfig.labelFontSize)}recalculateOuterPaddingToDrawBar(){Ot*this.getTickDistance()>this.outerPadding*2&&(this.outerPadding=Math.floor(Ot*this.getTickDistance()/2)),this.recalculateScale()}calculateSpaceIfDrawnHorizontally(t){let i=t.height;if(this.axisConfig.showAxisLine&&i>this.axisConfig.axisLineWidth&&(i-=this.axisConfig.axisLineWidth,this.showAxisLine=!0),this.axisConfig.showLabel){const s=this.getLabelDimension(),n=Ft*t.width;this.outerPadding=Math.min(s.width/2,n);const o=s.height+this.axisConfig.labelPadding*2;this.labelTextHeight=s.height,o<=i&&(i-=o,this.showLabel=!0)}if(this.axisConfig.showTick&&i>=this.axisConfig.tickLength&&(this.showTick=!0,i-=this.axisConfig.tickLength),this.axisConfig.showTitle&&this.title){const 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this.showTitle&&t.push({type:"text",groupTexts:["bottom-axis","title"],data:[{text:this.title,x:this.range[0]+(this.range[1]-this.range[0])/2,y:this.boundingRect.y+this.boundingRect.height-this.axisConfig.titlePadding-this.titleTextHeight,fill:this.axisThemeConfig.titleColor,fontSize:this.axisConfig.titleFontSize,rotation:0,verticalPos:"top",horizontalPos:"center"}]}),t}getDrawableElementsForTopAxis(){const t=[];if(this.showAxisLine){const i=this.boundingRect.y+this.boundingRect.height-this.axisConfig.axisLineWidth/2;t.push({type:"path",groupTexts:["top-axis","axis-line"],data:[{path:`M ${this.boundingRect.x},${i} L 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this.showChartTitle&&t.push({groupTexts:["chart-title"],type:"text",data:[{fontSize:this.chartConfig.titleFontSize,text:this.chartData.title,verticalPos:"middle",horizontalPos:"center",x:this.boundingRect.x+this.boundingRect.width/2,y:this.boundingRect.y+this.boundingRect.height/2,fill:this.chartThemeConfig.titleColor,rotation:0}]}),t}},a(J,"ChartTitle"),J);function $t(e,t,i,s){const n=new Ht(s);return new Pi(n,e,t,i)}a($t,"getChartTitleComponent");var tt,Li=(tt=class{constructor(t,i,s,n,o){this.plotData=t,this.xAxis=i,this.yAxis=s,this.orientation=n,this.plotIndex=o}getDrawableElement(){const t=this.plotData.data.map(s=>[this.xAxis.getScaleValue(s[0]),this.yAxis.getScaleValue(s[1])]);let i;return this.orientation==="horizontal"?i=Wt().y(s=>s[0]).x(s=>s[1])(t):i=Wt().x(s=>s[0]).y(s=>s[1])(t),i?[{groupTexts:["plot",`line-plot-${this.plotIndex}`],type:"path",data:[{path:i,strokeFill:this.plotData.strokeFill,strokeWidth:this.plotData.strokeWidth}]}]:[]}},a(tt,"LinePlot"),tt),it,Ei=(it=class{constructor(t,i,s,n,o,g){this.barData=t,this.boundingRect=i,this.xAxis=s,this.yAxis=n,this.orientation=o,this.plotIndex=g}getDrawableElement(){const t=this.barData.data.map(o=>[this.xAxis.getScaleValue(o[0]),this.yAxis.getScaleValue(o[1])]),s=Math.min(this.xAxis.getAxisOuterPadding()*2,this.xAxis.getTickDistance())*(1-.05),n=s/2;return this.orientation==="horizontal"?[{groupTexts:["plot",`bar-plot-${this.plotIndex}`],type:"rect",data:t.map(o=>({x:this.boundingRect.x,y:o[0]-n,height:s,width:o[1]-this.boundingRect.x,fill:this.barData.fill,strokeWidth:0,strokeFill:this.barData.fill}))}]:[{groupTexts:["plot",`bar-plot-${this.plotIndex}`],type:"rect",data:t.map(o=>({x:o[0]-n,y:o[1],width:s,height:this.boundingRect.y+this.boundingRect.height-o[1],fill:this.barData.fill,strokeWidth:0,strokeFill:this.barData.fill}))}]}},a(it,"BarPlot"),it),et,Ii=(et=class{constructor(t,i,s){this.chartConfig=t,this.chartData=i,this.chartThemeConfig=s,this.boundingRect={x:0,y:0,width:0,height:0}}setAxes(t,i){this.xAxis=t,this.yAxis=i}setBoundingBoxXY(t){this.boundingRect.x=t.x,this.boundingRect.y=t.y}calculateSpace(t){return this.boundingRect.width=t.width,this.boundingRect.height=t.height,{width:this.boundingRect.width,height:this.boundingRect.height}}getDrawableElements(){if(!(this.xAxis&&this.yAxis))throw Error("Axes must be passed to 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t=this.chartConfig.width,i=this.chartConfig.height,s=0,n=0,o=Math.floor(t*this.chartConfig.plotReservedSpacePercent/100),g=Math.floor(i*this.chartConfig.plotReservedSpacePercent/100),m=this.componentStore.plot.calculateSpace({width:o,height:g});t-=m.width,i-=m.height,m=this.componentStore.title.calculateSpace({width:this.chartConfig.width,height:i}),n=m.height,i-=m.height,this.componentStore.xAxis.setAxisPosition("bottom"),m=this.componentStore.xAxis.calculateSpace({width:t,height:i}),i-=m.height,this.componentStore.yAxis.setAxisPosition("left"),m=this.componentStore.yAxis.calculateSpace({width:t,height:i}),s=m.width,t-=m.width,t>0&&(o+=t,t=0),i>0&&(g+=i,i=0),this.componentStore.plot.calculateSpace({width:o,height:g}),this.componentStore.plot.setBoundingBoxXY({x:s,y:n}),this.componentStore.xAxis.setRange([s,s+o]),this.componentStore.xAxis.setBoundingBoxXY({x:s,y:n+g}),this.componentStore.yAxis.setRange([n,n+g]),this.componentStore.yAxis.setBoundingBoxXY({x:0,y:n}),this.chartData.plots.some(p=>At(p))&&this.componentStore.xAxis.recalculateOuterPaddingToDrawBar()}calculateHorizontalSpace(){let 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t=[];this.componentStore.plot.setAxes(this.componentStore.xAxis,this.componentStore.yAxis);for(const i of Object.values(this.componentStore))t.push(...i.getDrawableElements());return t}},a(st,"Orchestrator"),st),nt,Vi=(nt=class{static build(t,i,s,n){return new Mi(t,i,s,n).getDrawableElement()}},a(nt,"XYChartBuilder"),nt),rt=0,qt,ot=Tt(),ht=Rt(),A=Dt(),Ct=ht.plotColorPalette.split(",").map(e=>e.trim()),gt=!1,kt=!1;function Rt(){const e=Ci(),t=St();return Yt(e.xyChart,t.themeVariables.xyChart)}a(Rt,"getChartDefaultThemeConfig");function Tt(){const e=St();return Yt(wi.xyChart,e.xyChart)}a(Tt,"getChartDefaultConfig");function Dt(){return{yAxis:{type:"linear",title:"",min:1/0,max:-1/0},xAxis:{type:"band",title:"",categories:[]},title:"",plots:[]}}a(Dt,"getChartDefaultData");function xt(e){const t=St();return Ai(e.trim(),t)}a(xt,"textSanitizer");function jt(e){qt=e}a(jt,"setTmpSVGG");function 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+`+e);const C=mi(t),b=C.append("g").attr("class","main"),E=b.append("rect").attr("width",g.width).attr("height",g.height).attr("class","background");yi(C,g.height,g.width,!0),C.attr("viewBox",`0 0 ${g.width} ${g.height}`),E.attr("fill",o.backgroundColor),n.setTmpSVGG(C.append("g").attr("class","mermaid-tmp-group"));const D=n.getDrawableElem(),P={};function I(y){let _=b,c="";for(const[W]of y.entries()){let z=b;W>0&&P[c]&&(z=P[c]),c+=y[W],_=P[c],_||(_=P[c]=z.append("g").attr("class",y[W]))}return _}a(I,"getGroup");for(const y of D){if(y.data.length===0)continue;const _=I(y.groupTexts);switch(y.type){case"rect":if(_.selectAll("rect").data(y.data).enter().append("rect").attr("x",c=>c.x).attr("y",c=>c.y).attr("width",c=>c.width).attr("height",c=>c.height).attr("fill",c=>c.fill).attr("stroke",c=>c.strokeFill).attr("stroke-width",c=>c.strokeWidth),g.showDataLabel)if(g.chartOrientation==="horizontal"){let c=function(l,L){const{data:S,label:R}=l;return L*R.length*W<=S.width-10};a(c,"fitsHorizontally");const W=.7,z=y.data.map((l,L)=>({data:l,label:m[L].toString()})).filter(l=>l.data.width>0&&l.data.height>0),U=z.map(l=>{const{data:L}=l;let S=L.height*.7;for(;!c(l,S)&&S>0;)S-=1;return S}),X=Math.floor(Math.min(...U));_.selectAll("text").data(z).enter().append("text").attr("x",l=>l.data.x+l.data.width-10).attr("y",l=>l.data.y+l.data.height/2).attr("text-anchor","end").attr("dominant-baseline","middle").attr("fill","black").attr("font-size",`${X}px`).text(l=>l.label)}else{let c=function(l,L,S){const{data:R,label:$}=l,N=L*$.length*.7,O=R.x+R.width/2,h=O-N/2,u=O+N/2,x=h>=R.x&&u<=R.x+R.width,d=R.y+S+L<=R.y+R.height;return x&&d};a(c,"fitsInBar");const W=10,z=y.data.map((l,L)=>({data:l,label:m[L].toString()})).filter(l=>l.data.width>0&&l.data.height>0),U=z.map(l=>{const{data:L,label:S}=l;let R=L.width/(S.length*.7);for(;!c(l,R,W)&&R>0;)R-=1;return R}),X=Math.floor(Math.min(...U));_.selectAll("text").data(z).enter().append("text").attr("x",l=>l.data.x+l.data.width/2).attr("y",l=>l.data.y+W).attr("text-anchor","middle").attr("dominant-baseline","hanging").attr("fill","black").attr("font-size",`${X}px`).text(l=>l.label)}break;case"text":_.selectAll("text").data(y.data).enter().append("text").attr("x",0).attr("y",0).attr("fill",c=>c.fill).attr("font-size",c=>c.fontSize).attr("dominant-baseline",c=>p(c.verticalPos)).attr("text-anchor",c=>k(c.horizontalPos)).attr("transform",c=>v(c)).text(c=>c.text);break;case"path":_.selectAll("path").data(y.data).enter().append("path").attr("d",c=>c.path).attr("fill",c=>c.fill?c.fill:"none").attr("stroke",c=>c.strokeFill).attr("stroke-width",c=>c.strokeWidth);break}}},"draw"),Oi={draw:zi},$i={parser:Ti,db:Wi,renderer:Oi};export{$i as diagram};

package/dist/dashboard/index.html

@@ -5,8 +5,8 @@
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
     <title>Mycelium Control Center</title>
     <link rel="icon" type="image/svg+xml" href="/favicon.svg" />
-    <script type="module" crossorigin src="/assets/index-DDo3xcmE.js"></script>
-    <link rel="stylesheet" crossorigin href="/assets/index-CAenUQES.css">
+    <script type="module" crossorigin src="/assets/index-Dr2pvJml.js"></script>
+    <link rel="stylesheet" crossorigin href="/assets/index-DFP3ko3G.css">
   </head>
   <body>
     <div id="root"></div>

package/dist/routes/marketplace.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"marketplace.d.ts","sourceRoot":"","sources":["../../src/routes/marketplace.ts"],"names":[],"mappings":"AAWA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,SAAS,CAAC;AAEvC,wBAAgB,yBAAyB,CAAC,GAAG,EAAE,OAAO,GAAG,IAAI,CAqD5D"}
+{"version":3,"file":"marketplace.d.ts","sourceRoot":"","sources":["../../src/routes/marketplace.ts"],"names":[],"mappings":"AAeA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,SAAS,CAAC;AAEvC,wBAAgB,yBAAyB,CAAC,GAAG,EAAE,OAAO,GAAG,IAAI,CAkO5D"}

package/dist/routes/marketplace.js

@@ -1,6 +1,10 @@
 import { Router } from "express";
-import { searchMarketplace, installFromMarketplace, getPopularSkills, updateSkill } from "../core/marketplace.js";
+import * as fs from "node:fs/promises";
+import * as os from "node:os";
+import * as path from "node:path";
+import { searchMarketplace, installFromMarketplace, getPopularSkills, updateSkill, checkForUpdates, checkMyceliumUpdate } from "../core/marketplace.js";
 import { loadMarketplaceRegistry, addMarketplace, removeMarketplace, } from "../core/marketplace-registry.js";
+import { clearAllCaches } from "../core/marketplace-cache.js";
 import { asyncHandler } from "./async-handler.js";
 export function registerMarketplaceRoutes(app) {
     const router = Router();
@@ -37,6 +41,132 @@ export function registerMarketplaceRoutes(app) {
         const results = await getPopularSkills();
         res.json(results);
     }));
+    router.get("/updates", asyncHandler(async (_req, res) => {
+        const updates = await checkForUpdates();
+        res.json(updates);
+    }));
+    router.get("/self-update", asyncHandler(async (_req, res) => {
+        const result = await checkMyceliumUpdate();
+        res.json(result ?? { current: "unknown", latest: "unknown", hasUpdate: false });
+    }));
+    router.get("/content", asyncHandler(async (req, res) => {
+        const url = req.query.url;
+        const type = req.query.type || "skill";
+        if (!url) {
+            res.status(400).json({ error: "Missing url parameter" });
+            return;
+        }
+        const ALLOWED_TYPES = ["skill", "agent", "command", "mcp", "plugin"];
+        if (!ALLOWED_TYPES.includes(type)) {
+            res.status(400).json({ error: "Invalid type parameter" });
+            return;
+        }
+        // Strict URL validation — parse and whitelist hostnames
+        let parsedUrl;
+        try {
+            parsedUrl = new URL(url);
+        }
+        catch {
+            res.status(400).json({ error: "Invalid URL" });
+            return;
+        }
+        if (parsedUrl.protocol !== "https:") {
+            res.status(400).json({ error: "Only HTTPS URLs are supported" });
+            return;
+        }
+        const allowedHosts = ["github.com", "raw.githubusercontent.com"];
+        if (!allowedHosts.includes(parsedUrl.hostname)) {
+            res.status(400).json({ error: "Only GitHub URLs are supported" });
+            return;
+        }
+        try {
+            // Build raw URL using parsed components (not string replace) to prevent hostname spoofing
+            let rawUrl;
+            const treeBranchMatch = parsedUrl.pathname.match(/\/tree\/([^/]+)\//);
+            if (parsedUrl.hostname === "github.com" && treeBranchMatch) {
+                const branch = treeBranchMatch[1];
+                const rawPath = parsedUrl.pathname.replace(`/tree/${branch}/`, `/${branch}/`);
+                rawUrl = `https://raw.githubusercontent.com${rawPath}`;
+            }
+            else if (parsedUrl.hostname === "github.com" && /^\/[^/]+\/[^/]+\/?$/.test(parsedUrl.pathname)) {
+                // Bare repo URL: github.com/owner/repo → fetch README.md from main branch
+                const repoPath = parsedUrl.pathname.replace(/\/$/, "");
+                rawUrl = `https://raw.githubusercontent.com${repoPath}/main`;
+            }
+            else {
+                rawUrl = parsedUrl.href;
+            }
+            // Append correct file extension based on type
+            if (type === "skill" && !rawUrl.endsWith(".md"))
+                rawUrl += "/SKILL.md";
+            else if (!rawUrl.endsWith(".md"))
+                rawUrl += "/README.md";
+            const ghRes = await fetch(rawUrl, {
+                signal: AbortSignal.timeout(10000),
+                redirect: "manual", // Block redirects to prevent SSRF via open redirects
+            });
+            if (!ghRes.ok) {
+                res.status(404).json({ error: "Content not found" });
+                return;
+            }
+            const content = await ghRes.text();
+            res.json({ content });
+        }
+        catch {
+            res.status(500).json({ error: "Failed to fetch content" });
+        }
+    }));
+    // Read content for installed items from local disk
+    router.get("/local-content", asyncHandler(async (req, res) => {
+        const name = req.query.name;
+        const type = req.query.type || "skill";
+        if (!name) {
+            res.status(400).json({ error: "Missing name parameter" });
+            return;
+        }
+        // Sanitize name to prevent path traversal
+        const safeName = path.basename(name);
+        const home = os.homedir();
+        const candidates = [];
+        if (type === "skill" || type === "agent" || type === "command") {
+            const dir = type === "skill" ? "skills" : type === "agent" ? "agents" : "commands";
+            candidates.push(path.join(home, ".mycelium", dir, safeName, "SKILL.md"), path.join(home, ".mycelium", dir, safeName, "README.md"), path.join(home, ".mycelium", dir, safeName, "AGENT.md"));
+        }
+        // Plugin: check the plugin cache
+        if (type === "plugin") {
+            const cacheDir = path.join(home, ".claude", "plugins", "cache");
+            try {
+                const marketplaces = await fs.readdir(cacheDir);
+                for (const mp of marketplaces) {
+                    candidates.push(path.join(cacheDir, mp, safeName));
+                }
+            }
+            catch { /* no cache dir */ }
+        }
+        for (const candidate of candidates) {
+            try {
+                const stat = await fs.stat(candidate);
+                if (stat.isFile()) {
+                    const content = await fs.readFile(candidate, "utf-8");
+                    res.json({ content });
+                    return;
+                }
+                if (stat.isDirectory()) {
+                    // Try README.md or SKILL.md inside
+                    for (const fname of ["README.md", "SKILL.md", "AGENT.md"]) {
+                        try {
+                            const content = await fs.readFile(path.join(candidate, fname), "utf-8");
+                            res.json({ content });
+                            return;
+                        }
+                        catch { /* next */ }
+                    }
+                }
+            }
+            catch { /* next candidate */ }
+        }
+        res.status(404).json({ error: "No local content found" });
+    }));
     router.post("/update", asyncHandler(async (req, res) => {
         const { name, source } = req.body || {};
         if (!name || !source) {
@@ -46,6 +176,54 @@ export function registerMarketplaceRoutes(app) {
         const result = await updateSkill(name, source);
         res.json(result);
     }));
+    router.post("/refresh", asyncHandler(async (_req, res) => {
+        const cleared = await clearAllCaches();
+        const registry = await loadMarketplaceRegistry();
+        const refreshed = [];
+        const errors = [];
+        for (const [name, config] of Object.entries(registry)) {
+            if (!config.enabled)
+                continue;
+            try {
+                await searchMarketplace("", name, { forceRefresh: true });
+                refreshed.push(name);
+            }
+            catch (err) {
+                errors.push(`${name}: ${err instanceof Error ? err.message : String(err)}`);
+            }
+        }
+        res.json({ cleared, refreshed, errors });
+    }));
+    router.post("/audit", asyncHandler(async (req, res) => {
+        const { name, source, type, content, fileName } = req.body || {};
+        if (content && fileName) {
+            const { scanContent } = await import("../core/security-scanner.js");
+            const result = scanContent(content, fileName);
+            res.json(result);
+            return;
+        }
+        if (!name || !source) {
+            res.status(400).json({ success: false, error: "Missing required fields: name+source or content+fileName" });
+            return;
+        }
+        // Sanitize name to prevent path traversal
+        const safeName = String(name).replace(/[/\\..]/g, "");
+        if (!safeName || safeName !== name) {
+            res.status(400).json({ success: false, error: "Invalid item name" });
+            return;
+        }
+        const os = await import("node:os");
+        const path = await import("node:path");
+        const skillPath = path.join(os.default.homedir(), ".mycelium", "global", "skills", safeName);
+        try {
+            const { scanSkill } = await import("../core/security-scanner.js");
+            const result = await scanSkill(skillPath);
+            res.json(result);
+        }
+        catch (err) {
+            res.status(404).json({ safe: true, findings: [], scannedFiles: 0, duration: 0, error: `Item not found: ${safeName}` });
+        }
+    }));
     app.use("/api/marketplace", router);
 }
 //# sourceMappingURL=marketplace.js.map

package/dist/routes/marketplace.js.map

@@ -1 +1 @@
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package/dist/routes/remove.js

@@ -5,13 +5,13 @@ export function registerRemoveRoutes(app) {
     router.delete("/:name", asyncHandler(async (req, res) => {
         const { removeItem } = await import("../commands/remove.js");
         const type = req.query.type;
-        const purge = req.query.purge === "true";
-        const result = await removeItem(req.params.name, { type, purge });
+        const soft = req.query.soft === "true";
+        const result = await removeItem(req.params.name, { type, soft });
         res.json(result);
     }));
     router.delete("/plugin/:name", asyncHandler(async (req, res) => {
-        const { removeBySource } = await import("../commands/remove.js");
-        const result = await removeBySource(req.params.name);
+        const { removePlugin } = await import("../commands/remove.js");
+        const result = await removePlugin(req.params.name);
         res.json(result);
     }));
     app.use("/api/remove", router);

package/dist/routes/remove.js.map

@@ -1 +1 @@
-{"version":3,"file":"remove.js","sourceRoot":"","sources":["../../src/routes/remove.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AACjC,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAIlD,MAAM,UAAU,oBAAoB,CAAC,GAAY;IAC/C,MAAM,MAAM,GAAG,MAAM,EAAE,CAAC;IAExB,MAAM,CAAC,MAAM,CAAC,QAAQ,EAAE,YAAY,CAAC,KAAK,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE;QACtD,MAAM,EAAE,UAAU,EAAE,GAAG,MAAM,MAAM,CAAC,uBAAuB,CAAC,CAAC;QAC7D,MAAM,IAAI,GAAG,GAAG,CAAC,KAAK,CAAC,IAA0B,CAAC;QAClD,MAAM,KAAK,GAAG,GAAG,CAAC,KAAK,CAAC,KAAK,KAAK,MAAM,CAAC;QACzC,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,GAAG,CAAC,MAAM,CAAC,IAAc,EAAE,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC;QAC5E,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;IACnB,CAAC,CAAC,CAAC,CAAC;IAEJ,MAAM,CAAC,MAAM,CAAC,eAAe,EAAE,YAAY,CAAC,KAAK,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE;QAC7D,MAAM,EAAE,cAAc,EAAE,GAAG,MAAM,MAAM,CAAC,uBAAuB,CAAC,CAAC;QACjE,MAAM,MAAM,GAAG,MAAM,cAAc,CAAC,GAAG,CAAC,MAAM,CAAC,IAAc,CAAC,CAAC;QAC/D,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;IACnB,CAAC,CAAC,CAAC,CAAC;IAEJ,GAAG,CAAC,GAAG,CAAC,aAAa,EAAE,MAAM,CAAC,CAAC;AACjC,CAAC"}
+{"version":3,"file":"remove.js","sourceRoot":"","sources":["../../src/routes/remove.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AACjC,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAIlD,MAAM,UAAU,oBAAoB,CAAC,GAAY;IAC/C,MAAM,MAAM,GAAG,MAAM,EAAE,CAAC;IAExB,MAAM,CAAC,MAAM,CAAC,QAAQ,EAAE,YAAY,CAAC,KAAK,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE;QACtD,MAAM,EAAE,UAAU,EAAE,GAAG,MAAM,MAAM,CAAC,uBAAuB,CAAC,CAAC;QAC7D,MAAM,IAAI,GAAG,GAAG,CAAC,KAAK,CAAC,IAA0B,CAAC;QAClD,MAAM,IAAI,GAAG,GAAG,CAAC,KAAK,CAAC,IAAI,KAAK,MAAM,CAAC;QACvC,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,GAAG,CAAC,MAAM,CAAC,IAAc,EAAE,EAAE,IAAI,EAAE,IAAI,EAAE,CAAC,CAAC;QAC3E,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;IACnB,CAAC,CAAC,CAAC,CAAC;IAEJ,MAAM,CAAC,MAAM,CAAC,eAAe,EAAE,YAAY,CAAC,KAAK,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE;QAC7D,MAAM,EAAE,YAAY,EAAE,GAAG,MAAM,MAAM,CAAC,uBAAuB,CAAC,CAAC;QAC/D,MAAM,MAAM,GAAG,MAAM,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,IAAc,CAAC,CAAC;QAC7D,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;IACnB,CAAC,CAAC,CAAC,CAAC;IAEJ,GAAG,CAAC,GAAG,CAAC,aAAa,EAAE,MAAM,CAAC,CAAC;AACjC,CAAC"}

package/dist/routes/state.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"state.d.ts","sourceRoot":"","sources":["../../src/routes/state.ts"],"names":[],"mappings":"AAsBA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,SAAS,CAAC;AAEvC,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,OAAO,GAAG,IAAI,CAoJtD"}
+{"version":3,"file":"state.d.ts","sourceRoot":"","sources":["../../src/routes/state.ts"],"names":[],"mappings":"AAwBA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,SAAS,CAAC;AAoBvC,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,OAAO,GAAG,IAAI,CA4KtD"}

package/dist/routes/state.js

@@ -12,10 +12,30 @@ import { detectInstalledTools } from "../core/tool-detector.js";
 import { enableSkillOrMcp } from "../commands/enable.js";
 import { disableSkillOrMcp } from "../commands/disable.js";
 import { MYCELIUM_HOME } from "../core/fs-helpers.js";
-import { getDisabledItems, getDeletedItems, ALL_ITEM_TYPES } from "../core/manifest-state.js";
+import { getDisabledItems, getDeletedItems, ALL_ITEM_TYPES, loadStateManifest, ITEM_SECTIONS } from "../core/manifest-state.js";
 import { verifyItemState } from "../core/state-verifier.js";
 import { getLivePluginState } from "../core/plugin-state.js";
 import { asyncHandler } from "./async-handler.js";
+import { TOOL_REGISTRY } from "@mycelish/core";
+/** Get installed tools that have a specific capability. */
+function toolsWithCap(installedToolIds, cap) {
+    return installedToolIds.filter(id => {
+        const desc = TOOL_REGISTRY[id];
+        return desc?.capabilities.includes(cap);
+    });
+}
+/** Compute which installed tools an item targets based on capability + tools/excludeTools config. */
+function computeConnectedTools(cfg, installedToolIds, capability) {
+    // First filter by capability
+    const capableTools = toolsWithCap(installedToolIds, capability);
+    if (!cfg)
+        return capableTools;
+    if (cfg.tools?.length)
+        return capableTools.filter(id => cfg.tools.includes(id));
+    if (cfg.excludeTools?.length)
+        return capableTools.filter(id => !cfg.excludeTools.includes(id));
+    return capableTools;
+}
 export function registerStateRoutes(app) {
     const stateRouter = Router();
     const toggleRouter = Router();
@@ -32,18 +52,43 @@ export function registerStateRoutes(app) {
         // Load disabled and deleted items from manifest.yaml (single source of truth)
         const disabledItems = await getDisabledItems(process.cwd());
         const deletedItems = await getDeletedItems(process.cwd());
+        const stateManifest = await loadStateManifest(MYCELIUM_HOME);
         const skillsDir = path.join(MYCELIUM_HOME, "global", "skills");
         let skills = [];
         try {
             const entries = await fs.readdir(skillsDir);
             skills = entries
                 .filter((name) => !deletedItems.has(name))
-                .map((name) => ({
-                name,
-                status: disabledItems.has(name) ? "disabled" : "synced",
-                enabled: !disabledItems.has(name),
-                connectedTools: installedToolIds,
-            }));
+                .filter((name) => {
+                // Exclude plugin-origin skills (shown under their plugin node)
+                const cfg = stateManifest?.skills?.[name];
+                if (cfg?.pluginOrigin)
+                    return false;
+                return true;
+            })
+                .filter((name) => {
+                // Exclude items registered as non-skill types in manifest
+                if (!stateManifest)
+                    return true;
+                for (const { key, type } of ITEM_SECTIONS) {
+                    if (type === "skill")
+                        continue;
+                    const section = stateManifest[key];
+                    if (section?.[name])
+                        return false;
+                }
+                return true;
+            })
+                .map((name) => {
+                const cfg = stateManifest?.skills?.[name];
+                const connTools = computeConnectedTools(cfg, installedToolIds, "skills");
+                return {
+                    name,
+                    status: disabledItems.has(name) ? "disabled" : "synced",
+                    enabled: !disabledItems.has(name),
+                    connectedTools: connTools,
+                };
+            });
         }
         catch {
             // directory doesn't exist yet
@@ -51,17 +96,19 @@ export function registerStateRoutes(app) {
         let mcps = [];
         try {
             const mcpContent = await fs.readFile(path.join(MYCELIUM_HOME, "global", "mcps.yaml"), "utf-8");
-            const parsed = parseYaml(mcpContent);
+            const parsed = parseYaml(mcpContent, { uniqueKeys: false });
             if (parsed && typeof parsed === "object") {
                 mcps = Object.keys(parsed)
                     .filter((name) => !deletedItems.has(name))
                     .map((name) => {
                     const enabled = !disabledItems.has(name);
+                    const mcpCfg = stateManifest?.mcps?.[name];
+                    const tools = computeConnectedTools(mcpCfg, installedToolIds, "mcp");
                     return {
                         name,
                         status: enabled ? "synced" : "disabled",
                         enabled,
-                        connectedTools: installedToolIds,
+                        connectedTools: tools,
                     };
                 });
             }

package/dist/routes/state.js.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@mycelish/cli",
-  "version": "0.2.8",
+  "version": "0.3.0",
   "description": "CLI for Mycelium - Universal AI Tool Orchestrator",
   "type": "module",
   "main": "./dist/index.js",
@@ -39,7 +39,7 @@
     "picocolors": "^1.1.1",
     "yaml": "^2.8.2",
     "zod": "^4.3.6",
-    "@mycelish/core": "0.2.8"
+    "@mycelish/core": "0.3.0"
   },
   "scripts": {
     "build": "tsc && cp -r ../dashboard/dist dist/dashboard 2>/dev/null || true",