@mrpatronz/nexusflow 2.4.1 → 2.5.0

package/dist/core/sync.js

@@ -7,7 +7,7 @@
  */
 import * as path from 'node:path';
 import { loadFeatureConfig, resolveRepoInfos } from './workspace.js';
-import { isInPlace } from '../utils/feature.js';
+import { isInPlace, resolveFeatureRepoPath } from '../utils/feature.js';
 import { recordRepoSync } from './workspace-state.js';
 import { getWorkspaceRepos, rebaseRepo } from '../utils/multi-git.js';
 import { analyzeAllReposCached } from '../analyzers/index.js';
@@ -31,8 +31,10 @@ export async function syncWorkspace(workspacePath) {
     }
     // In-place workspaces work directly in the source repos on whatever branch
     // the user has checked out — rebasing those from under them would be a
-    // destructive surprise. Sync is a deliberate no-op.
-    if (isInPlace(feature)) {
+    // destructive surprise. If repos are dynamically isolated into dedicated
+    // worktrees, only those isolated worktrees are synced against their base.
+    const hasIsolated = isInPlace(feature) && Boolean(feature.isolatedRepos && Object.keys(feature.isolatedRepos).length > 0);
+    if (isInPlace(feature) && !hasIsolated) {
         return {
             workspacePath,
             branchName: feature.branchName,
@@ -54,15 +56,26 @@ export async function syncWorkspace(workspacePath) {
     let conflictCount = 0;
     let errorCount = 0;
     for (const repo of repos) {
-        const defaultBranch = repo.defaultBranch || 'main';
-        const result = await rebaseRepo(repo.path, defaultBranch);
+        const isIsolated = isInPlace(feature) && Boolean(feature.isolatedRepos?.[repo.name] ?? feature.isolatedRepos?.[repo.path]);
+        if (isInPlace(feature) && !isIsolated) {
+            repoReports.push({
+                name: repo.name,
+                baseBranch: '',
+                status: 'up-to-date',
+                message: 'In-place repo — branches are managed by you; sync skipped.',
+            });
+            continue;
+        }
+        const isolatedInfo = feature.isolatedRepos?.[repo.name] ?? feature.isolatedRepos?.[repo.path];
+        const targetBase = isolatedInfo?.baseBranch || repo.defaultBranch || 'main';
+        const result = await rebaseRepo(repo.path, targetBase);
         await recordRepoSync(workspacePath, repo.name, {
             status: result.status,
             message: result.message,
         });
         repoReports.push({
             name: repo.name,
-            baseBranch: defaultBranch,
+            baseBranch: targetBase,
             status: result.status,
             message: result.message,
             conflict: result.conflict,
@@ -85,7 +98,8 @@ export async function syncWorkspace(workspacePath) {
     let contextRefreshed = false;
     if (contentChanged) {
         try {
-            const allRepos = await resolveRepoInfos(feature.repos);
+            const resolved = feature.repos.map((r) => resolveFeatureRepoPath(feature, workspacePath, r));
+            const allRepos = await resolveRepoInfos(resolved);
             const { analysis, analyzed } = await analyzeAllReposCached(allRepos, workspacePath);
             const ctx = { feature, repos: allRepos, analysis };
             await generateContextFiles(ctx, feature.assistants, workspacePath);

package/dist/core/sync.js.map

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package/dist/core/workspace.d.ts

@@ -98,4 +98,10 @@ export declare function deleteWorkspace(workspacePath: string): Promise<void>;
  * @param repoPath - Absolute path to the repository to add.
  */
 export declare function addRepoToWorkspace(workspacePath: string, repoPath: string): Promise<void>;
+/**
+ * Automatically adds NexusFlow workspace context and config files to git's local
+ * exclude list for each repository so they never show up in `git status` or get committed.
+ */
+export declare function excludeNexusFlowFiles(workspacePath: string, feature: Feature): Promise<void>;
+export { isolateWorkspaceRepo, type IsolateRepoOptions, type IsolateRepoResult } from './isolate.js';
 //# sourceMappingURL=workspace.d.ts.map

package/dist/core/workspace.d.ts.map

@@ -1 +1 @@
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package/dist/core/workspace.js

@@ -401,8 +401,8 @@ export async function deleteWorkspace(workspacePath) {
         }
     }
     // In-place: feature.repos are the user's source repositories — they must
-    // never be touched. Deleting the workspace only removes the lightweight
-    // directory (manifest + context files) at the end of this function.
+    // never be touched. If specific repos were dynamically isolated into
+    // dedicated worktrees, those isolated worktrees are safely removed here.
     if (feature && !isInPlace(feature)) {
         const origRepos = feature.originalRepos || [];
         for (let i = 0; i < feature.repos.length; i++) {
@@ -423,6 +423,20 @@ export async function deleteWorkspace(workspacePath) {
             }
         }
     }
+    else if (feature && isInPlace(feature) && feature.isolatedRepos) {
+        const origRepos = feature.originalRepos || feature.repos;
+        for (const [repoName, isolated] of Object.entries(feature.isolatedRepos)) {
+            const matchedSource = origRepos.find((r) => path.basename(r).toLowerCase() === repoName.toLowerCase()) ||
+                origRepos[0] ||
+                path.join(workspacePath, repoName);
+            try {
+                await removeWorktree(matchedSource, isolated.worktreePath, true);
+            }
+            catch (error) {
+                console.warn(`Warning: failed to remove isolated worktree for ${repoName} in ${matchedSource}:`, error);
+            }
+        }
+    }
     else if (!feature) {
         // Manifest is missing. Try to detect worktrees by scanning subdirectories
         try {
@@ -435,7 +449,7 @@ export async function deleteWorkspace(workspacePath) {
                         const stat = await fs.stat(gitFilePath);
                         if (stat.isFile()) {
                             const content = await fs.readFile(gitFilePath, 'utf-8');
-                            const match = content.match(/gitdir:\s*(.+)\.git\/worktrees/);
+                            const match = content.match(/gitdir:\s*(.+)[/\\]\.git[/\\]worktrees/i);
                             if (match && match[1]) {
                                 const mainRepoPath = path.resolve(match[1].trim());
                                 await removeWorktree(mainRepoPath, subPath, true);
@@ -457,6 +471,14 @@ export async function deleteWorkspace(workspacePath) {
         console.error(`Failed to delete workspace directory ${workspacePath}:`, error);
         throw error;
     }
+    // Post-deletion prune across source repos to ensure clean git state
+    const sourceReposToPrune = feature?.originalRepos || feature?.repos || [];
+    for (const repoPath of sourceReposToPrune) {
+        try {
+            await execa('git', ['worktree', 'prune'], { cwd: repoPath });
+        }
+        catch { }
+    }
 }
 /**
  * Adds a repository to an existing workspace.
@@ -560,7 +582,7 @@ export async function addRepoToWorkspace(workspacePath, repoPath) {
  * Automatically adds NexusFlow workspace context and config files to git's local
  * exclude list for each repository so they never show up in `git status` or get committed.
  */
-async function excludeNexusFlowFiles(workspacePath, feature) {
+export async function excludeNexusFlowFiles(workspacePath, feature) {
     const excludeEntries = [
         'CLAUDE.md',
         'AGENTS.md',
@@ -619,4 +641,5 @@ async function excludeNexusFlowFiles(workspacePath, feature) {
         }
     }
 }
+export { isolateWorkspaceRepo } from './isolate.js';
 //# sourceMappingURL=workspace.js.map

package/dist/core/workspace.js.map

@@ -1 +1 @@
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package/dist/core/worktree.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"worktree.d.ts","sourceRoot":"","sources":["../../src/core/worktree.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAIH,qCAAqC;AACrC,MAAM,WAAW,oBAAoB;IACnC;;;;OAIG;IACH,aAAa,EAAE,OAAO,CAAC;CACxB;AAED,0CAA0C;AAC1C,MAAM,WAAW,qBAAqB;IACpC;;;;OAIG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;CACrB;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,UAAU,EAAE,MAAM,EAClB,UAAU,EAAE,MAAM,EAClB,UAAU,EAAE,MAAM,EAClB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,oBAAoB,CAAC,CAmG/B;AAED;;;;;;;;GAQG;AACH,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,YAAY,EAAE,MAAM,EACpB,KAAK,UAAQ,GACZ,OAAO,CAAC,IAAI,CAAC,CAOf"}
+{"version":3,"file":"worktree.d.ts","sourceRoot":"","sources":["../../src/core/worktree.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAKH,qCAAqC;AACrC,MAAM,WAAW,oBAAoB;IACnC;;;;OAIG;IACH,aAAa,EAAE,OAAO,CAAC;CACxB;AAED,0CAA0C;AAC1C,MAAM,WAAW,qBAAqB;IACpC;;;;OAIG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;CACrB;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,UAAU,EAAE,MAAM,EAClB,UAAU,EAAE,MAAM,EAClB,UAAU,EAAE,MAAM,EAClB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,oBAAoB,CAAC,CA0G/B;AAED;;;;;;;;GAQG;AACH,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,YAAY,EAAE,MAAM,EACpB,KAAK,UAAQ,GACZ,OAAO,CAAC,IAAI,CAAC,CAOf"}

package/dist/core/worktree.js

@@ -3,6 +3,7 @@
  * Git worktree operations — create and remove worktrees for feature branches.
  */
 import { execa } from 'execa';
+import { isValidBranchName } from '../utils/git.js';
 /**
  * Creates a git worktree for a branch, materializing the branch as needed:
  *
@@ -21,6 +22,12 @@ import { execa } from 'execa';
  * @returns Whether a new local branch ref was created (vs. checking out an existing one).
  */
 export async function createWorktree(repoPath, targetPath, branchName, baseBranch, options = {}) {
+    if (!isValidBranchName(branchName)) {
+        throw new Error(`Invalid branch name "${branchName}".`);
+    }
+    if (!isValidBranchName(baseBranch)) {
+        throw new Error(`Invalid base branch name "${baseBranch}".`);
+    }
     let fetched = false;
     // Fetch latest remote state.
     try {

package/dist/core/worktree.js.map

@@ -1 +1 @@
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+{"version":3,"file":"worktree.js","sourceRoot":"","sources":["../../src/core/worktree.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,KAAK,EAAE,MAAM,OAAO,CAAC;AAC9B,OAAO,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AAsBpD;;;;;;;;;;;;;;;;GAgBG;AACH,MAAM,CAAC,KAAK,UAAU,cAAc,CAClC,QAAgB,EAChB,UAAkB,EAClB,UAAkB,EAClB,UAAkB,EAClB,UAAiC,EAAE;IAEnC,IAAI,CAAC,iBAAiB,CAAC,UAAU,CAAC,EAAE,CAAC;QACnC,MAAM,IAAI,KAAK,CAAC,wBAAwB,UAAU,IAAI,CAAC,CAAC;IAC1D,CAAC;IACD,IAAI,CAAC,iBAAiB,CAAC,UAAU,CAAC,EAAE,CAAC;QACnC,MAAM,IAAI,KAAK,CAAC,6BAA6B,UAAU,IAAI,CAAC,CAAC;IAC/D,CAAC;IAED,IAAI,OAAO,GAAG,KAAK,CAAC;IACpB,6BAA6B;IAC7B,IAAI,CAAC;QACH,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,OAAO,EAAE,QAAQ,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;QAC3D,OAAO,GAAG,IAAI,CAAC;IACjB,CAAC;IAAC,MAAM,CAAC;QACP,qEAAqE;IACvE,CAAC;IAED,+FAA+F;IAC/F,IAAI,OAAO,EAAE,CAAC;QACZ,IAAI,CAAC;YACH,MAAM,EAAE,MAAM,EAAE,gBAAgB,EAAE,GAAG,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,QAAQ,EAAE,gBAAgB,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;YACzG,MAAM,aAAa,GAAG,gBAAgB,CAAC,IAAI,EAAE,CAAC;YAE9C,MAAM,gBAAgB,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,GAAG,CAAC,CAAC,UAAU,EAAE,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC,CAAC;YAE7E,KAAK,MAAM,MAAM,IAAI,gBAAgB,EAAE,CAAC;gBACtC,IAAI,CAAC;oBACH,IAAI,aAAa,KAAK,MAAM,EAAE,CAAC;wBAC7B,2FAA2F;wBAC3F,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,OAAO,EAAE,WAAW,EAAE,UAAU,MAAM,EAAE,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;oBACpF,CAAC;yBAAM,CAAC;wBACN,0DAA0D;wBAC1D,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,OAAO,EAAE,QAAQ,EAAE,GAAG,MAAM,IAAI,MAAM,EAAE,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;oBACpF,CAAC;gBACH,CAAC;gBAAC,MAAM,CAAC;oBACP,2CAA2C;gBAC7C,CAAC;YACH,CAAC;QACH,CAAC;QAAC,MAAM,CAAC;YACP,kBAAkB;QACpB,CAAC;IACH,CAAC;IAED,iGAAiG;IACjG,IAAI,UAAU,GAAG,UAAU,CAAC;IAC5B,IAAI,OAAO,EAAE,CAAC;QACZ,IAAI,CAAC;YACH,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,WAAW,EAAE,UAAU,EAAE,UAAU,UAAU,EAAE,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;YACzF,UAAU,GAAG,UAAU,UAAU,EAAE,CAAC;QACtC,CAAC;QAAC,MAAM,CAAC;YACP,kEAAkE;QACpE,CAAC;IACH,CAAC;IAED,oDAAoD;IACpD,IAAI,YAAY,GAAG,KAAK,CAAC;IACzB,IAAI,CAAC;QACH,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,WAAW,EAAE,UAAU,EAAE,cAAc,UAAU,EAAE,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;QAC7F,YAAY,GAAG,IAAI,CAAC;IACtB,CAAC;IAAC,MAAM,CAAC;QACP,gCAAgC;IAClC,CAAC;IAED,4EAA4E;IAC5E,IAAI,kBAAkB,GAAG,KAAK,CAAC;IAC/B,IAAI,CAAC,YAAY,EAAE,CAAC;QAClB,IAAI,CAAC;YACH,MAAM,KAAK,CAAC,KAAK,EAAE,CAAC,WAAW,EAAE,UAAU,EAAE,uBAAuB,UAAU,EAAE,CAAC,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;YACtG,kBAAkB,GAAG,IAAI,CAAC;QAC5B,CAAC;QAAC,MAAM,CAAC;YACP,yCAAyC;QAC3C,CAAC;IACH,CAAC;IAED,IAAI,OAAO,CAAC,SAAS,IAAI,CAAC,YAAY,IAAI,CAAC,kBAAkB,EAAE,CAAC;QAC9D,MAAM,IAAI,KAAK,CACb,WAAW,UAAU,4CAA4C,QAAQ,GAAG,CAC7E,CAAC;IACJ,CAAC;IAED,sBAAsB;IACtB,IAAI,YAAY,EAAE,CAAC;QACjB,6DAA6D;QAC7D,MAAM,KAAK,CACT,KAAK,EACL,CAAC,UAAU,EAAE,KAAK,EAAE,UAAU,EAAE,UAAU,CAAC,EAC3C,EAAE,GAAG,EAAE,QAAQ,EAAE,CAClB,CAAC;IACJ,CAAC;SAAM,IAAI,kBAAkB,EAAE,CAAC;QAC9B,2EAA2E;QAC3E,2EAA2E;QAC3E,MAAM,KAAK,CACT,KAAK,EACL,CAAC,UAAU,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAE,UAAU,UAAU,EAAE,CAAC,EACpF,EAAE,GAAG,EAAE,QAAQ,EAAE,CAClB,CAAC;IACJ,CAAC;SAAM,CAAC;QACN,iGAAiG;QACjG,MAAM,KAAK,CACT,KAAK,EACL,CAAC,UAAU,EAAE,KAAK,EAAE,YAAY,EAAE,UAAU,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,CAAC,EAC3E,EAAE,GAAG,EAAE,QAAQ,EAAE,CAClB,CAAC;IACJ,CAAC;IAED,OAAO,EAAE,aAAa,EAAE,CAAC,YAAY,EAAE,CAAC;AAC1C,CAAC;AAED;;;;;;;;GAQG;AACH,MAAM,CAAC,KAAK,UAAU,cAAc,CAClC,QAAgB,EAChB,YAAoB,EACpB,KAAK,GAAG,KAAK;IAEb,MAAM,IAAI,GAAG,CAAC,UAAU,EAAE,QAAQ,CAAC,CAAC;IACpC,IAAI,KAAK,EAAE,CAAC;QACV,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IACvB,CAAC;IACD,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACxB,MAAM,KAAK,CAAC,KAAK,EAAE,IAAI,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAC,CAAC;AAC9C,CAAC"}

package/dist/desktop-server.js

@@ -13,7 +13,8 @@ import { startServer } from './server.js';
 const port = Number(process.env.NF_PORT ?? process.argv[2] ?? 0) || 0;
 startServer(port, { strictPort: false })
     .then(({ port: actualPort }) => {
-    // The Electron shell watches stdout for this URL to know the server is up.
+    // The Electron shell watches stdout for this token to know the server is up.
+    console.log(`NEXUSFLOW_READY_PORT=${actualPort}`);
     console.log(`Dashboard running at: http://localhost:${actualPort}`);
 })
     .catch((err) => {

package/dist/desktop-server.js.map

@@ -1 +1 @@
-{"version":3,"file":"desktop-server.js","sourceRoot":"","sources":["../src/desktop-server.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAE1C,MAAM,IAAI,GAAG,MAAM,CAAC,OAAO,CAAC,GAAG,CAAC,OAAO,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,CAAC;AAEtE,WAAW,CAAC,IAAI,EAAE,EAAE,UAAU,EAAE,KAAK,EAAE,CAAC;KACrC,IAAI,CAAC,CAAC,EAAE,IAAI,EAAE,UAAU,EAAE,EAAE,EAAE;IAC7B,2EAA2E;IAC3E,OAAO,CAAC,GAAG,CAAC,0CAA0C,UAAU,EAAE,CAAC,CAAC;AACtE,CAAC,CAAC;KACD,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE;IACb,OAAO,CAAC,KAAK,CAAC,mCAAmC,EAAE,GAAG,CAAC,CAAC;IACxD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC,CAAC"}
+{"version":3,"file":"desktop-server.js","sourceRoot":"","sources":["../src/desktop-server.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAE1C,MAAM,IAAI,GAAG,MAAM,CAAC,OAAO,CAAC,GAAG,CAAC,OAAO,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,CAAC;AAEtE,WAAW,CAAC,IAAI,EAAE,EAAE,UAAU,EAAE,KAAK,EAAE,CAAC;KACrC,IAAI,CAAC,CAAC,EAAE,IAAI,EAAE,UAAU,EAAE,EAAE,EAAE;IAC7B,6EAA6E;IAC7E,OAAO,CAAC,GAAG,CAAC,wBAAwB,UAAU,EAAE,CAAC,CAAC;IAClD,OAAO,CAAC,GAAG,CAAC,0CAA0C,UAAU,EAAE,CAAC,CAAC;AACtE,CAAC,CAAC;KACD,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE;IACb,OAAO,CAAC,KAAK,CAAC,mCAAmC,EAAE,GAAG,CAAC,CAAC;IACxD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC,CAAC"}

package/dist/generators/base.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"base.d.ts","sourceRoot":"","sources":["../../src/generators/base.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAKpD,4DAA4D;AAC5D,MAAM,WAAW,aAAa;IAC5B,2CAA2C;IAC3C,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,+CAA+C;IAC/C,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,kCAAkC;IAClC,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAmFD;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAsB,mBAAmB,CAAC,GAAG,EAAE,gBAAgB,GAAG,OAAO,CAAC,MAAM,CAAC,CAwGhF"}
+{"version":3,"file":"base.d.ts","sourceRoot":"","sources":["../../src/generators/base.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAKpD,4DAA4D;AAC5D,MAAM,WAAW,aAAa;IAC5B,2CAA2C;IAC3C,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,+CAA+C;IAC/C,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,kCAAkC;IAClC,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAmFD;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAsB,mBAAmB,CAAC,GAAG,EAAE,gBAAgB,GAAG,OAAO,CAAC,MAAM,CAAC,CAgHhF"}

package/dist/generators/base.js

@@ -115,18 +115,23 @@ export async function buildContextContent(ctx) {
         const rel = relations.get(repo.name);
         const verify = a ? getConventionalTestCommand(a) : '';
         // In-place repos can each sit on a different branch, which is worth stating.
+        // Repos dynamically isolated into dedicated worktrees show their worktree path.
         // In worktree mode they are all on the feature branch named just below, so
         // repeating it per row would be noise.
-        const branch = rel?.branch;
+        const isIsolated = inPlace && Boolean(feature.isolatedRepos?.[repo.name] ?? feature.isolatedRepos?.[repo.path]);
+        const isolated = feature.isolatedRepos?.[repo.name] ?? feature.isolatedRepos?.[repo.path];
+        const branch = rel?.branch ?? (isolated ? isolated.branchName : undefined);
         const location = inPlace
-            ? `${repo.path}${branch ? ` (on ${branch})` : ''}`
-            : repo.name;
+            ? (isIsolated
+                ? `\`${isolated.worktreePath}\` *(on ${branch ?? 'feature branch'} [isolated worktree])*`
+                : `\`${repo.path}\`${branch ? ` (on ${branch})` : ''}`)
+            : `\`${repo.name}\``;
         const ties = [];
         if (rel?.dependsOn.length)
             ties.push(`needs ${rel.dependsOn.map((n) => '`' + n + '`').join(', ')}`);
         if (rel?.consumedBy.length)
             ties.push(`used by ${rel.consumedBy.map((n) => '`' + n + '`').join(', ')}`);
-        return `| \`${repo.name}\` | \`${location}\` | ${verify ? '`' + verify + '`' : '—'} | ${ties.join('; ') || '—'} |`;
+        return `| \`${repo.name}\` | ${location} | ${verify ? '`' + verify + '`' : '—'} | ${ties.join('; ') || '—'} |`;
     });
     // The earliest repo something actually builds on — and it names what. The
     // previous test was "does any repo anywhere have a dependency", which pointed
@@ -142,8 +147,11 @@ export async function buildContextContent(ctx) {
         : '';
     // Only the rule an assistant cannot infer. Which directory to run a command
     // in, and how git works, are not worth the tokens.
+    const hasIsolated = inPlace && Boolean(feature.isolatedRepos && Object.keys(feature.isolatedRepos).length > 0);
     const structureRule = inPlace
-        ? 'These are the original repositories, on whatever branch each has checked out — NexusFlow does not manage branches here, so check before you commit.'
+        ? (hasIsolated
+            ? '**RULE**: Repos marked `[isolated worktree]` MUST be edited inside their dedicated worktree path. Unisolated repos are in READ-ONLY reference mode: before modifying files in any unisolated repository, you MUST invoke the `isolate_repo` MCP tool (or run `nexusflow isolate <repo>`).'
+            : '**RULE**: These repositories are in READ-ONLY reference mode on host branches. Before making ANY file modifications, you MUST invoke the `isolate_repo` MCP tool (or run `nexusflow isolate <repo>`) to create a dedicated feature worktree.')
         : `Each repo above is a separate git worktree on \`${feature.branchName}\`. **Do not edit the original repositories elsewhere on disk** — that is a different checkout and changes there are not part of this feature.`;
     // Repos that already ship their own assistant instructions; those override
     // anything here for that repo, so it is worth naming them. Walked via `repos`

package/dist/generators/base.js.map

@@ -1 +1 @@
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package/dist/generators/base.test.js

@@ -223,7 +223,7 @@ describe('buildContextContent', () => {
             const content = await buildContextContent(ctx);
             expect(content).toContain(nodeRepo);
             expect(content).toContain('(on existing-feature)');
-            expect(content).toContain('NexusFlow does not manage branches here');
+            expect(content).toContain('READ-ONLY reference mode');
             expect(content).not.toContain('Do not edit the original repositories');
         });
     });

package/dist/generators/base.test.js.map

@@ -1 +1 @@
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package/dist/index.js

@@ -27,6 +27,7 @@ import { loadConfig } from './core/config.js';
 import { debugLog } from './utils/debug.js';
 import { loadPlugins } from './core/plugins/loader.js';
 import { addRepoCommand } from './commands/add-repo.js';
+import { isolateCommand } from './commands/isolate.js';
 import { mcpRunCommand, mcpSetupCommand } from './commands/mcp.js';
 import { handoffCommand } from './commands/handoff.js';
 import { refreshCommand } from './commands/refresh.js';
@@ -321,6 +322,27 @@ program
         process.exit(1);
     }
 });
+program
+    .command('isolate')
+    .description('Dynamically isolate a repository in an in-place workspace into a dedicated worktree on demand')
+    .argument('[repo]', 'Name or path of the repository to isolate')
+    .argument('[branch]', 'Target feature branch name')
+    .option('-b, --branch <branch>', 'Target feature branch name')
+    .option('--base <base>', 'Base branch to branch off')
+    .option('-w, --workspace <workspace>', 'Workspace name or path')
+    .action(async (repo, branchArg, options) => {
+    try {
+        await isolateCommand(repo, branchArg, options);
+    }
+    catch (error) {
+        if (error instanceof Error && error.message.includes('User force closed')) {
+            console.log('\nCancelled.');
+            process.exit(0);
+        }
+        console.error(error);
+        process.exit(1);
+    }
+});
 program
     .command('handoff')
     .description('Generate a compact handoff bundle (nexusflow-handoff.md) for session resumption')