@mrpatronz/nexusflow 0.2.3 → 0.2.5

package/dist/commands/handoff.js

@@ -0,0 +1,235 @@
+import chalk from 'chalk';
+import { select } from '@inquirer/prompts';
+import * as path from 'node:path';
+import * as fs from 'node:fs/promises';
+import { execa } from 'execa';
+import { loadConfig } from '../core/config.js';
+import { listWorkspaces, loadFeatureConfig } from '../core/workspace.js';
+import { getRepoStatus } from '../utils/multi-git.js';
+import { analyzeAllRepos } from '../analyzers/index.js';
+import { buildDependencyGraph } from '../generators/plan-generator.js';
+/**
+ * Runs the handoff command.
+ * Auto-detects workspace from CWD or prompts user to select one.
+ *
+ * @param workspaceArg - Optional workspace path from CLI.
+ */
+export async function handoffCommand(workspaceArg) {
+    console.log(chalk.bold.cyan('\n🤝 NexusFlow — Handoff Bundle\n'));
+    const workspacePath = await resolveWorkspace(workspaceArg);
+    if (!workspacePath)
+        return;
+    const feature = await loadFeatureConfig(workspacePath);
+    if (!feature) {
+        console.error(chalk.red('✖ Failed to load workspace configuration. Ensure nexusflow.json exists.'));
+        return;
+    }
+    const allRepos = await Promise.all(feature.repos.map(async (r) => {
+        const repoName = path.basename(r);
+        return {
+            name: repoName,
+            path: r,
+            defaultBranch: 'main',
+        };
+    }));
+    console.log(chalk.cyan('Retrieving repository statuses and running analysis...'));
+    const analysis = await analyzeAllRepos(allRepos);
+    const reposStatusInfo = await Promise.all(allRepos.map(async (repo) => {
+        const status = await getRepoStatus(repo.path);
+        const branch = await getRepoBranch(repo.path);
+        const repoAnalysis = analysis.get(repo.path);
+        const suggestedFiles = getSuggestedFiles(repo.path, status.changedFiles, repoAnalysis);
+        const testCommand = getTestCommand(repo.path, repoAnalysis);
+        return {
+            name: repo.name,
+            path: repo.path,
+            branch,
+            dirtySummary: status.summary,
+            isDirty: status.hasChanges,
+            changedFiles: status.changedFiles,
+            suggestedFiles,
+            testCommand,
+        };
+    }));
+    // Parse knowledge from nexusflow-knowledge.md if it exists
+    const knowledgePath = path.join(workspacePath, 'nexusflow-knowledge.md');
+    let extractedGotchas = '_None recorded yet._';
+    let extractedDecisions = '_None recorded yet._';
+    let extractedQuestions = '_None recorded yet._';
+    try {
+        const knowledgeContent = await fs.readFile(knowledgePath, 'utf-8');
+        extractedGotchas = extractSection(knowledgeContent, 'Known Gotchas');
+        extractedDecisions = extractSection(knowledgeContent, 'Architecture Decisions');
+        extractedQuestions = extractSection(knowledgeContent, 'Clarifying Questions for the User');
+    }
+    catch { }
+    // Build dependency description
+    let depGraphDescription = '';
+    try {
+        const graph = buildDependencyGraph(analysis, allRepos);
+        const relations = [];
+        for (const [name, node] of graph) {
+            if (node.dependsOn.length > 0) {
+                relations.push(`- **${name}** depends on: ${node.dependsOn.map(d => `\`${d}\``).join(', ')}`);
+            }
+        }
+        depGraphDescription = relations.length > 0 ? relations.join('\n') : '_No inter-repo package dependencies detected._';
+    }
+    catch {
+        depGraphDescription = '_Error generating dependency graph._';
+    }
+    const timestamp = new Date().toISOString();
+    // Format handoff bundle
+    const md = [];
+    md.push(`# NexusFlow Handoff Bundle — ${feature.branchName}`);
+    md.push('');
+    md.push(`> **Workspace Path:** \`${workspacePath}\``);
+    md.push(`> **Current Branch:** \`${feature.branchName}\``);
+    md.push(`> **Generated:** ${timestamp} (UTC)`);
+    md.push('> **Instruction:** Read this handoff bundle first to resume context immediately.');
+    md.push('');
+    md.push('## 📋 Repository Statuses');
+    md.push('');
+    md.push('| Repository | Branch | Git Status | Suggested Files to Read |');
+    md.push('|---|---|---|---|');
+    for (const r of reposStatusInfo) {
+        const filesList = r.suggestedFiles.map(f => `\`${f}\``).join(', ') || '—';
+        const statusText = r.isDirty ? `⚠️ ${r.dirtySummary}` : '✅ Clean';
+        md.push(`| **${r.name}** | \`${r.branch}\` | ${statusText} | ${filesList} |`);
+    }
+    md.push('');
+    md.push('## 🧪 Verification & Run Commands');
+    md.push('');
+    for (const r of reposStatusInfo) {
+        md.push(`- **${r.name}**: \`${r.testCommand}\``);
+    }
+    md.push('');
+    md.push('## 🏗️ Inter-Repo Package Graph');
+    md.push('');
+    md.push(depGraphDescription);
+    md.push('');
+    md.push('## 📝 Active Session Context (from nexusflow-knowledge.md)');
+    md.push('');
+    md.push('### Open Gotchas & Blockers');
+    md.push(extractedGotchas);
+    md.push('');
+    md.push('### Recent Architecture Decisions');
+    md.push(extractedDecisions);
+    md.push('');
+    md.push('### Outstanding Clarifying Questions');
+    md.push(extractedQuestions);
+    md.push('');
+    const handoffFilePath = path.join(workspacePath, 'nexusflow-handoff.md');
+    await fs.writeFile(handoffFilePath, md.join('\n'), 'utf-8');
+    console.log(chalk.green(`\n✅ Generated handoff bundle: ${chalk.bold('nexusflow-handoff.md')}`));
+    console.log(chalk.dim(`  Path: ${handoffFilePath}\n`));
+}
+/**
+ * Gets the current branch name of a repository.
+ */
+async function getRepoBranch(repoPath) {
+    try {
+        const { stdout } = await execa('git', ['rev-parse', '--abbrev-ref', 'HEAD'], { cwd: repoPath });
+        return stdout.trim();
+    }
+    catch {
+        return 'unknown';
+    }
+}
+/**
+ * Determines a candidate list of files to read first.
+ */
+function getSuggestedFiles(repoPath, dirtyFiles, analysis) {
+    if (dirtyFiles.length > 0) {
+        return dirtyFiles.slice(0, 3).map(f => f.replace(/\\/g, '/'));
+    }
+    const suggestions = [];
+    if (analysis && analysis.runConfig && analysis.runConfig.entryPoints) {
+        for (const ep of analysis.runConfig.entryPoints) {
+            if (ep.projectPath && !suggestions.includes(ep.projectPath)) {
+                suggestions.push(ep.projectPath);
+            }
+        }
+    }
+    suggestions.push('README.md');
+    return suggestions.slice(0, 3);
+}
+/**
+ * Resolves correct test command.
+ */
+function getTestCommand(repoPath, analysis) {
+    if (analysis) {
+        if (analysis.techStack.languages.includes('csharp')) {
+            return 'dotnet test';
+        }
+        if (analysis.techStack.languages.includes('typescript') || analysis.techStack.languages.includes('javascript')) {
+            return 'npm test';
+        }
+        if (analysis.techStack.languages.includes('python')) {
+            return 'pytest';
+        }
+        if (analysis.techStack.languages.includes('go')) {
+            return 'go test ./...';
+        }
+    }
+    return 'npm test'; // fallback
+}
+/**
+ * Extracts a specific section from the knowledge file.
+ */
+function extractSection(content, header) {
+    const lines = content.split('\n');
+    const index = lines.findIndex(l => l.trim().startsWith(`## ${header}`));
+    if (index === -1)
+        return '_None recorded yet._';
+    const resultLines = [];
+    for (let i = index + 1; i < lines.length; i++) {
+        if (lines[i].trim().startsWith('##'))
+            break;
+        resultLines.push(lines[i]);
+    }
+    const sectionContent = resultLines.join('\n').trim();
+    if (!sectionContent ||
+        sectionContent.includes('No assumptions recorded yet') ||
+        sectionContent.includes('No open questions recorded yet') ||
+        sectionContent.includes('No decisions recorded yet') ||
+        sectionContent.includes('No gotchas recorded yet') ||
+        sectionContent.includes('AI assistant to populate')) {
+        return '_None recorded yet._';
+    }
+    return sectionContent;
+}
+/**
+ * Resolves a workspace path.
+ */
+async function resolveWorkspace(workspaceArg) {
+    if (workspaceArg) {
+        const absolutePath = path.resolve(workspaceArg);
+        try {
+            await fs.access(path.join(absolutePath, 'nexusflow.json'));
+            return absolutePath;
+        }
+        catch {
+            console.error(chalk.red(`✖ Invalid workspace: No nexusflow.json found at ${absolutePath}`));
+            return null;
+        }
+    }
+    const cwdFeature = await loadFeatureConfig(process.cwd());
+    if (cwdFeature)
+        return process.cwd();
+    const config = await loadConfig();
+    const workspaces = await listWorkspaces(config.workspacesDir);
+    if (workspaces.length === 0) {
+        console.log(chalk.yellow('No workspaces found.\n'));
+        return null;
+    }
+    const selected = await select({
+        message: 'Select a workspace:',
+        choices: workspaces.map((ws) => ({
+            name: `${ws.branchName} ${chalk.dim(`(${ws.repos.length} repos)`)}`,
+            value: ws.workspacePath,
+        })),
+    });
+    return selected;
+}
+//# sourceMappingURL=handoff.js.map

package/dist/commands/handoff.js.map

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package/dist/commands/refresh.d.ts

@@ -0,0 +1,11 @@
+/**
+ * Runs the refresh command.
+ * Updates context files, maps, and plans.
+ *
+ * @param options - CLI options, e.g. { repo: 'API_CoworkerFacade' }.
+ * @param workspaceArg - Optional workspace path.
+ */
+export declare function refreshCommand(options: {
+    repo?: string;
+}, workspaceArg?: string): Promise<void>;
+//# sourceMappingURL=refresh.d.ts.map

package/dist/commands/refresh.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"refresh.d.ts","sourceRoot":"","sources":["../../src/commands/refresh.ts"],"names":[],"mappings":"AAYA;;;;;;GAMG;AACH,wBAAsB,cAAc,CAClC,OAAO,EAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAA;CAAE,EAC1B,YAAY,CAAC,EAAE,MAAM,GACpB,OAAO,CAAC,IAAI,CAAC,CA+Ef"}

package/dist/commands/refresh.js

@@ -0,0 +1,121 @@
+import chalk from 'chalk';
+import { select } from '@inquirer/prompts';
+import * as path from 'node:path';
+import * as fs from 'node:fs/promises';
+import { loadConfig } from '../core/config.js';
+import { listWorkspaces, loadFeatureConfig } from '../core/workspace.js';
+import { analyzeAllRepos } from '../analyzers/index.js';
+import { generateContextFiles } from '../generators/index.js';
+/**
+ * Runs the refresh command.
+ * Updates context files, maps, and plans.
+ *
+ * @param options - CLI options, e.g. { repo: 'API_CoworkerFacade' }.
+ * @param workspaceArg - Optional workspace path.
+ */
+export async function refreshCommand(options, workspaceArg) {
+    console.log(chalk.bold.cyan('\n🔄 NexusFlow — Refresh Workspace Context\n'));
+    const workspacePath = await resolveWorkspace(workspaceArg);
+    if (!workspacePath)
+        return;
+    const feature = await loadFeatureConfig(workspacePath);
+    if (!feature) {
+        console.error(chalk.red('✖ Failed to load workspace configuration. Ensure nexusflow.json exists.'));
+        return;
+    }
+    const onlyRepo = options.repo;
+    if (onlyRepo) {
+        const hasRepo = feature.repos.some(r => path.basename(r) === onlyRepo);
+        if (!hasRepo) {
+            console.error(chalk.red(`✖ Repository "${onlyRepo}" is not part of this workspace.`));
+            console.log(chalk.dim(`  Available repos: ${feature.repos.map(r => path.basename(r)).join(', ')}`));
+            return;
+        }
+        console.log(`Refreshing context for repository: ${chalk.bold(onlyRepo)}`);
+    }
+    else {
+        console.log('Refreshing context for all repositories...');
+    }
+    const allRepos = await Promise.all(feature.repos.map(async (r) => {
+        const repoName = path.basename(r);
+        return {
+            name: repoName,
+            path: r,
+            defaultBranch: 'main',
+        };
+    }));
+    console.log(chalk.cyan('Running project analysis...'));
+    const analysis = await analyzeAllRepos(allRepos);
+    const ctx = {
+        feature,
+        repos: allRepos,
+        analysis,
+    };
+    console.log(chalk.cyan('Regenerating context files and maps...'));
+    await generateContextFiles(ctx, feature.assistants, workspacePath, onlyRepo);
+    // If repopack context packing is enabled
+    const config = await loadConfig();
+    if (config.packContextXml) {
+        const { packWorkspace } = await import('../core/packer.js');
+        console.log(chalk.cyan('Re-packing workspace context...'));
+        try {
+            await packWorkspace(workspacePath);
+        }
+        catch (error) {
+            console.warn(chalk.yellow(`  ⚠ Failed to repack context: ${error}`));
+        }
+    }
+    // If handoff file exists, refresh it automatically too!
+    const handoffPath = path.join(workspacePath, 'nexusflow-handoff.md');
+    let hasHandoff = false;
+    try {
+        await fs.access(handoffPath);
+        hasHandoff = true;
+    }
+    catch { }
+    if (hasHandoff) {
+        console.log(chalk.cyan('Refreshing handoff bundle...'));
+        try {
+            const { handoffCommand } = await import('./handoff.js');
+            await handoffCommand(workspacePath);
+        }
+        catch (error) {
+            console.warn(chalk.yellow(`  ⚠ Failed to refresh handoff bundle: ${error}`));
+        }
+    }
+    console.log(chalk.bold.green('\n✅ Workspace context successfully refreshed!\n'));
+}
+/**
+ * Resolves a workspace path.
+ */
+async function resolveWorkspace(workspaceArg) {
+    if (workspaceArg) {
+        const absolutePath = path.resolve(workspaceArg);
+        try {
+            await fs.access(path.join(absolutePath, 'nexusflow.json'));
+            return absolutePath;
+        }
+        catch {
+            console.error(chalk.red(`✖ Invalid workspace: No nexusflow.json found at ${absolutePath}`));
+            return null;
+        }
+    }
+    const cwdFeature = await loadFeatureConfig(process.cwd());
+    if (cwdFeature)
+        return process.cwd();
+    const config = await loadConfig();
+    const workspaces = await listWorkspaces(config.workspacesDir);
+    if (workspaces.length === 0) {
+        console.log(chalk.yellow('No workspaces found.\n'));
+        return null;
+    }
+    const selected = await select({
+        message: 'Select a workspace to refresh:',
+        choices: workspaces.map((ws) => ({
+            name: `${ws.branchName} ${chalk.dim(`(${ws.repos.length} repos)`)}`,
+            value: ws.workspacePath,
+        })),
+    });
+    return selected;
+}
+//# sourceMappingURL=refresh.js.map

package/dist/commands/refresh.js.map

@@ -0,0 +1 @@
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package/dist/core/config.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../../src/core/config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAMH,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAQnD;;GAEG;AACH,wBAAgB,YAAY,IAAI,MAAM,CAErC;AAED;;GAEG;AACH,wBAAgB,gBAAgB,IAAI,eAAe,CAiClD;AAED;;GAEG;AACH,wBAAsB,eAAe,IAAI,OAAO,CAAC,IAAI,CAAC,CAGrD;AAED;;;;;GAKG;AACH,wBAAsB,UAAU,IAAI,OAAO,CAAC,eAAe,CAAC,CAa3D;AAED;;;;;GAKG;AACH,wBAAsB,UAAU,CAAC,MAAM,EAAE,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CAMvE"}
+{"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../../src/core/config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAMH,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAQnD;;GAEG;AACH,wBAAgB,YAAY,IAAI,MAAM,CAErC;AAED;;GAEG;AACH,wBAAgB,gBAAgB,IAAI,eAAe,CAkClD;AAED;;GAEG;AACH,wBAAsB,eAAe,IAAI,OAAO,CAAC,IAAI,CAAC,CAGrD;AAED;;;;;GAKG;AACH,wBAAsB,UAAU,IAAI,OAAO,CAAC,eAAe,CAAC,CAa3D;AAED;;;;;GAKG;AACH,wBAAsB,UAAU,CAAC,MAAM,EAAE,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CAMvE"}

package/dist/core/config.js

@@ -24,6 +24,7 @@ export function getDefaultConfig() {
         devDir: path.join(os.homedir(), 'dev'),
         workspacesDir: path.join(os.homedir(), 'dev', 'workspaces'),
         defaultAssistant: null,
+        defaultEditor: null,
         scanDepth: 2,
         packContextXml: false,
         excludePatterns: [

package/dist/core/config.js.map

@@ -1 +1 @@
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+{"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/core/config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAClC,OAAO,KAAK,EAAE,MAAM,SAAS,CAAC;AAI9B,iEAAiE;AACjE,MAAM,eAAe,GAAG,YAAY,CAAC;AAErC,+BAA+B;AAC/B,MAAM,gBAAgB,GAAG,aAAa,CAAC;AAEvC;;GAEG;AACH,MAAM,UAAU,YAAY;IAC1B,OAAO,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,OAAO,EAAE,EAAE,eAAe,CAAC,CAAC;AAClD,CAAC;AAED;;GAEG;AACH,MAAM,UAAU,gBAAgB;IAC9B,OAAO;QACL,OAAO,EAAE,OAAO;QAChB,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,OAAO,EAAE,EAAE,KAAK,CAAC;QACtC,aAAa,EAAE,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,YAAY,CAAC;QAC3D,gBAAgB,EAAE,IAAI;QACtB,aAAa,EAAE,IAAI;QACnB,SAAS,EAAE,CAAC;QACZ,cAAc,EAAE,KAAK;QACrB,eAAe,EAAE;YACf,oBAAoB;YACpB,WAAW;YACX,WAAW;YACX,YAAY;YACZ,WAAW;YACX,YAAY;YACZ,WAAW;YACX,sBAAsB;YACtB,mBAAmB;YACnB,cAAc;YACd,UAAU;YACV,UAAU;YACV,WAAW;YACX,UAAU;YACV,UAAU;YACV,UAAU;YACV,UAAU;YACV,UAAU;YACV,aAAa;YACb,WAAW;YACX,eAAe;YACf,aAAa;SACd;KACF,CAAC;AACJ,CAAC;AAED;;GAEG;AACH,MAAM,CAAC,KAAK,UAAU,eAAe;IACnC,MAAM,SAAS,GAAG,YAAY,EAAE,CAAC;IACjC,MAAM,EAAE,CAAC,KAAK,CAAC,SAAS,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;AACjD,CAAC;AAED;;;;;GAKG;AACH,MAAM,CAAC,KAAK,UAAU,UAAU;IAC9B,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,YAAY,EAAE,EAAE,gBAAgB,CAAC,CAAC;IAE/D,IAAI,CAAC;QACH,MAAM,GAAG,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;QACnD,MAAM,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAA6B,CAAC;QAE3D,8DAA8D;QAC9D,OAAO,EAAE,GAAG,gBAAgB,EAAE,EAAE,GAAG,MAAM,EAAE,CAAC;IAC9C,CAAC;IAAC,MAAM,CAAC;QACP,yDAAyD;QACzD,OAAO,gBAAgB,EAAE,CAAC;IAC5B,CAAC;AACH,CAAC;AAED;;;;;GAKG;AACH,MAAM,CAAC,KAAK,UAAU,UAAU,CAAC,MAAuB;IACtD,MAAM,eAAe,EAAE,CAAC;IAExB,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,YAAY,EAAE,EAAE,gBAAgB,CAAC,CAAC;IAC/D,MAAM,IAAI,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,CAAC;IACpD,MAAM,EAAE,CAAC,SAAS,CAAC,UAAU,EAAE,IAAI,EAAE,OAAO,CAAC,CAAC;AAChD,CAAC"}

package/dist/core/workspace.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"workspace.d.ts","sourceRoot":"","sources":["../../src/core/workspace.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAMH,OAAO,KAAK,EAAE,OAAO,EAAE,QAAQ,EAAoB,MAAM,aAAa,CAAC;AAWvE;;;;;;GAMG;AACH,wBAAgB,gBAAgB,CAC9B,aAAa,EAAE,MAAM,EACrB,UAAU,EAAE,MAAM,GACjB,MAAM,CAER;AAED;;;;;;;;;GASG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,OAAO,EAChB,KAAK,EAAE,QAAQ,EAAE,GAChB,OAAO,CAAC,MAAM,CAAC,CAkCjB;AAED;;;;;;;;GAQG;AACH,wBAAsB,cAAc,CAClC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,OAAO,EAAE,CAAC,CAmCpB;AAED;;;;;GAKG;AACH,wBAAsB,iBAAiB,CACrC,aAAa,EAAE,MAAM,EACrB,OAAO,EAAE,OAAO,GACf,OAAO,CAAC,IAAI,CAAC,CAIf;AAED;;;;;;;GAOG;AACH,wBAAsB,iBAAiB,CACrC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,OAAO,GAAG,IAAI,CAAC,CASzB;AAED;;;;GAIG;AACH,wBAAsB,eAAe,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,QAAQ,CAAC,CAOzE;AAED;;;;;GAKG;AACH,wBAAsB,eAAe,CACnC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,IAAI,CAAC,CAkDf;AAED;;;;;GAKG;AACH,wBAAsB,kBAAkB,CACtC,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,OAAO,CAAC,IAAI,CAAC,CAgEf"}
+{"version":3,"file":"workspace.d.ts","sourceRoot":"","sources":["../../src/core/workspace.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAMH,OAAO,KAAK,EAAE,OAAO,EAAE,QAAQ,EAAoB,MAAM,aAAa,CAAC;AAWvE;;;;;;GAMG;AACH,wBAAgB,gBAAgB,CAC9B,aAAa,EAAE,MAAM,EACrB,UAAU,EAAE,MAAM,GACjB,MAAM,CAER;AAED;;;;;;;;;GASG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,OAAO,EAChB,KAAK,EAAE,QAAQ,EAAE,GAChB,OAAO,CAAC,MAAM,CAAC,CAkDjB;AAED;;;;;;;;GAQG;AACH,wBAAsB,cAAc,CAClC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,OAAO,EAAE,CAAC,CAmCpB;AAED;;;;;GAKG;AACH,wBAAsB,iBAAiB,CACrC,aAAa,EAAE,MAAM,EACrB,OAAO,EAAE,OAAO,GACf,OAAO,CAAC,IAAI,CAAC,CAIf;AAED;;;;;;;GAOG;AACH,wBAAsB,iBAAiB,CACrC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,OAAO,GAAG,IAAI,CAAC,CASzB;AAED;;;;GAIG;AACH,wBAAsB,eAAe,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,QAAQ,CAAC,CAOzE;AAED;;;;;GAKG;AACH,wBAAsB,eAAe,CACnC,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,IAAI,CAAC,CAkDf;AAED;;;;;GAKG;AACH,wBAAsB,kBAAkB,CACtC,aAAa,EAAE,MAAM,EACrB,QAAQ,EAAE,MAAM,GACf,OAAO,CAAC,IAAI,CAAC,CAgEf"}

package/dist/core/workspace.js

@@ -51,6 +51,18 @@ export async function createWorkspace(feature, repos) {
         // Silently ignore or log warning if git init fails
         console.warn('Warning: Failed to initialize git repository at workspace root:', error);
     }
+    // Create .vscode/settings.json to allow VS Code search to query inside ignored sub-repos
+    try {
+        const vscodeDir = path.join(workspacePath, '.vscode');
+        await fs.mkdir(vscodeDir, { recursive: true });
+        const settings = {
+            "search.useIgnoreFiles": false
+        };
+        await fs.writeFile(path.join(vscodeDir, 'settings.json'), JSON.stringify(settings, null, 2) + '\n', 'utf-8');
+    }
+    catch (error) {
+        console.warn('Warning: Failed to create .vscode/settings.json:', error);
+    }
     // Create a worktree for each repo inside the workspace.
     for (const repo of repos) {
         const worktreeTarget = path.join(workspacePath, repo.name);

package/dist/core/workspace.js.map

@@ -1 +1 @@
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package/dist/generators/base.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"base.d.ts","sourceRoot":"","sources":["../../src/generators/base.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,KAAK,EAAE,gBAAgB,EAAmB,MAAM,aAAa,CAAC;AAwDrE;;;;;;GAMG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,gBAAgB,GAAG,MAAM,CAwIjE"}
+{"version":3,"file":"base.d.ts","sourceRoot":"","sources":["../../src/generators/base.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,KAAK,EAAE,gBAAgB,EAAmB,MAAM,aAAa,CAAC;AAwDrE;;;;;;GAMG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,gBAAgB,GAAG,MAAM,CAgJjE"}

package/dist/generators/base.js

@@ -4,6 +4,7 @@
  * use as their foundation. Now includes rich project analysis data when available.
  */
 import * as path from 'node:path';
+import * as fs from 'node:fs';
 /**
  * Formats a ProjectAnalysis into a readable markdown section.
  */
@@ -132,14 +133,20 @@ ${parts.join('\n')}
         }
     }
     const knowledgePath = path.join(workspacePath, 'nexusflow-knowledge.md').replace(/\\/g, '/');
-    const taskSection = `## First Steps
-
-Your very first task upon entering this workspace is to explore the codebase and align with the user:
-
-1. **Verify Assumptions**: Open [nexusflow-knowledge.md](file:///${knowledgePath}) and fill in the **Project Assumptions** section with a brief description of what each project does, its tech stack, and responsibilities.
-2. **Raise Questions**: Document any outstanding uncertainties or architectural questions in the **Clarifying Questions for the User** section.
-3. **Obtain Approval**: Ask the user to confirm your assumptions and answer your questions before writing any code.
-`;
+    let setupDone = false;
+    try {
+        const realKnowledgePath = path.join(workspacePath, 'nexusflow-knowledge.md');
+        if (fs.existsSync(realKnowledgePath)) {
+            const content = fs.readFileSync(realKnowledgePath, 'utf-8');
+            if (!content.includes('No assumptions recorded yet') && !content.includes('AI assistant to populate')) {
+                setupDone = true;
+            }
+        }
+    }
+    catch { }
+    const taskSection = setupDone
+        ? `## Setup Status\n\n✅ **Setup Completed**: Project assumptions and initial questions have been addressed. Refer to [nexusflow-knowledge.md](file:///${knowledgePath}) for persistent session details.`
+        : `## First Steps\n\nYour very first task upon entering this workspace is to explore the codebase and align with the user:\n\n1. **Verify Assumptions**: Open [nexusflow-knowledge.md](file:///${knowledgePath}) and fill in the **Project Assumptions** section with a brief description of what each project does, its tech stack, and responsibilities.\n2. **Raise Questions**: Document any outstanding uncertainties or architectural questions in the **Clarifying Questions for the User** section.\n3. **Obtain Approval**: Ask the user to confirm your assumptions and answer your questions before writing any code.`;
     return `# Multi-Repo Workspace Context
 
 ## Feature: ${feature.id}
@@ -174,6 +181,8 @@ ${taskSection}
     - \`nexusflow diff\` — view changes across all sub-repositories.
     - \`nexusflow commit\` — commit and push changes across modified repositories.
     - \`nexusflow sync\` — rebase all repositories with their default base branches.
+    - \`nexusflow refresh\` — regenerate maps, context files and plans without rebasing.
+    - \`nexusflow doctor\` — run diagnostics to verify workspace health.
 - **Workspace Knowledge**: Read \`nexusflow-knowledge.md\` at the start of every session. It serves as the persistent memory for this feature. Before ending your session, append significant architecture decisions, discovered gotchas, and checklist progress to \`nexusflow-knowledge.md\`. Never delete or overwrite existing knowledge/decisions — only append.
 - **Implementation Plan**: Refer to \`nexusflow-plan.md\` for the suggested implementation order based on dependency analysis. Follow the phased implementation order to avoid blocking yourself on cross-repo dependencies.
 - Read each project's existing \`README.md\` and any doc files before proposing changes.

package/dist/generators/base.js.map

@@ -1 +1 @@
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package/dist/generators/index.d.ts

@@ -11,7 +11,7 @@ import type { AIAssistant, WorkspaceContext } from '../types.js';
  * @param assistants    - Which AI assistants to generate context files for.
  * @param workspacePath - Absolute path to the workspace root directory.
  */
-export declare function generateContextFiles(ctx: WorkspaceContext, assistants: AIAssistant[], workspacePath: string): Promise<void>;
+export declare function generateContextFiles(ctx: WorkspaceContext, assistants: AIAssistant[], workspacePath: string, onlyRepo?: string): Promise<void>;
 export { generateClaudeConfig } from './claude.js';
 export { generateCodexConfig } from './codex.js';
 export { generateCopilotConfig } from './copilot.js';

package/dist/generators/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/generators/index.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAoGjE;;;;;;;;;;;GAWG;AACH,wBAAsB,oBAAoB,CACxC,GAAG,EAAE,gBAAgB,EACrB,UAAU,EAAE,WAAW,EAAE,EACzB,aAAa,EAAE,MAAM,GACpB,OAAO,CAAC,IAAI,CAAC,CAgGf;AAGD,OAAO,EAAE,oBAAoB,EAAE,MAAM,aAAa,CAAC;AACnD,OAAO,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AACjD,OAAO,EAAE,qBAAqB,EAAE,MAAM,cAAc,CAAC;AACrD,OAAO,EAAE,oBAAoB,EAAE,MAAM,aAAa,CAAC;AACnD,OAAO,EAAE,mBAAmB,EAAE,MAAM,WAAW,CAAC;AAChD,OAAO,EAAE,0BAA0B,EAAE,MAAM,qBAAqB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/generators/index.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAoGjE;;;;;;;;;;;GAWG;AACH,wBAAsB,oBAAoB,CACxC,GAAG,EAAE,gBAAgB,EACrB,UAAU,EAAE,WAAW,EAAE,EACzB,aAAa,EAAE,MAAM,EACrB,QAAQ,CAAC,EAAE,MAAM,GAChB,OAAO,CAAC,IAAI,CAAC,CAmGf;AAGD,OAAO,EAAE,oBAAoB,EAAE,MAAM,aAAa,CAAC;AACnD,OAAO,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AACjD,OAAO,EAAE,qBAAqB,EAAE,MAAM,cAAc,CAAC;AACrD,OAAO,EAAE,oBAAoB,EAAE,MAAM,aAAa,CAAC;AACnD,OAAO,EAAE,mBAAmB,EAAE,MAAM,WAAW,CAAC;AAChD,OAAO,EAAE,0BAA0B,EAAE,MAAM,qBAAqB,CAAC"}

package/dist/generators/index.js

@@ -100,7 +100,7 @@ _(No gotchas recorded yet.)_
  * @param assistants    - Which AI assistants to generate context files for.
  * @param workspacePath - Absolute path to the workspace root directory.
  */
-export async function generateContextFiles(ctx, assistants, workspacePath) {
+export async function generateContextFiles(ctx, assistants, workspacePath, onlyRepo) {
     // Always generate a universal WORKSPACE.md at the workspace root
     try {
         const content = buildContextContent(ctx);
@@ -135,6 +135,9 @@ export async function generateContextFiles(ctx, assistants, workspacePath) {
             allProduced.add(a.name.toLowerCase());
         }
         for (const repo of ctx.repos) {
+            if (onlyRepo && repo.name !== onlyRepo) {
+                continue;
+            }
             const a = ctx.analysis.get(repo.path);
             if (a) {
                 try {