@mrciphersmith/keryx 0.2.112 → 0.2.114

package/dist/core.js

@@ -8678,6 +8678,21 @@ var init_evidence = __esm(() => {
   CLAIM_TYPES = new Set(["observation", "hypothesis", "decision", "instruction"]);
 });
 
+// src/wiki/think-tags.ts
+function maskCodeRegions(text) {
+  const maskMatch = (m) => "\x00".repeat(m.length);
+  return text.replace(FENCE_RE2, maskMatch).replace(INLINE_CODE_RE, maskMatch);
+}
+function containsThinkTags(text) {
+  return STRAY_THINK_TAG_RE.test(maskCodeRegions(text));
+}
+var STRAY_THINK_TAG_RE, FENCE_RE2, INLINE_CODE_RE;
+var init_think_tags = __esm(() => {
+  STRAY_THINK_TAG_RE = /<\/?think(?:ing)?>/i;
+  FENCE_RE2 = /```[\s\S]*?```/g;
+  INLINE_CODE_RE = /``[^`\n]*?``|`[^`\n]*?`/g;
+});
+
 // src/wiki/templates.ts
 function templateKindForPageType(type) {
   return WIKI_TEMPLATE_CONTRACTS.find((contract) => contract.pageTypes.includes(type))?.kind ?? null;
@@ -9099,6 +9114,7 @@ __export(exports_service3, {
   collectGraphWikiCandidates: () => collectGraphWikiCandidates,
   createGdWikiService: () => createGdWikiService,
   extractModuleApi: () => extractModuleApi,
+  isTestSourceFile: () => isTestSourceFile,
   moduleNameFromProjectPath: () => moduleNameFromProjectPath,
   validModuleNames: () => validModuleNames,
   wikiCheckLinks: () => wikiCheckLinks,
@@ -9137,9 +9153,22 @@ async function wikiStatus(cwd) {
       count: pages.filter((page) => page.pageType === type).length
     })),
     lastIndexGeneratedAt: await readIndexGeneratedAt(cwd),
-    lastLinkCheck: await readLinkCheckState(cwd)
+    lastLinkCheck: await readLinkCheckState(cwd),
+    pagesWithThinkTags: await findPagesWithThinkTags(pages)
   };
 }
+async function findPagesWithThinkTags(pages) {
+  const flagged = [];
+  for (const page of pages) {
+    try {
+      const content = await readFile20(page.absolutePath, "utf8");
+      if (containsThinkTags(content)) {
+        flagged.push(page.relativePath);
+      }
+    } catch {}
+  }
+  return flagged;
+}
 async function wikiCreatePage(input) {
   const typeConfig = WIKI_PAGE_TYPES.find((entry) => entry.type === input.type);
   if (!typeConfig) {
@@ -9472,6 +9501,7 @@ async function collectGraphWikiCandidates(cwd, generatedAt, limit, onlyModules)
   const fileOut = new Map;
   const moduleDeps = new Map;
   const moduleDependents = new Map;
+  const excludedTestEdges = new Map;
   let edges = 0;
   let imports = 0;
   let unresolved = 0;
@@ -9492,6 +9522,11 @@ async function collectGraphWikiCandidates(cwd, generatedAt, limit, onlyModules)
     const fromModule = fileToModule.get(from) ?? moduleNameFromProjectPath(from);
     const toModule = fileToModule.get(to) ?? moduleNameFromProjectPath(to);
     if (fromModule && toModule && fromModule !== toModule) {
+      if (isTestSourceFile(from)) {
+        recordExcludedTestEdge(excludedTestEdges, fromModule, from);
+        recordExcludedTestEdge(excludedTestEdges, toModule, from);
+        continue;
+      }
       bumpNestedCount(moduleDeps, fromModule, toModule);
       bumpNestedCount(moduleDependents, toModule, fromModule);
     }
@@ -9551,6 +9586,12 @@ async function collectGraphWikiCandidates(cwd, generatedAt, limit, onlyModules)
     pushRef("Key files", keyFiles.map((entry) => "- `" + entry.file + "` - imported by " + entry.incoming + ", imports " + entry.outgoing));
     pushRef("Depends on", deps.map(([target, count]) => "- `" + target + "` - " + count + " import(s)"));
     pushRef("Depended on by", dependents.map(([source, count]) => "- `" + source + "` - " + count + " import(s)"));
+    const dropped = excludedTestEdges.get(moduleName);
+    if (dropped) {
+      pushRef("Dependency basis", [
+        "- Production imports only: " + dropped.count + " import(s) from test file(s) (e.g. `" + dropped.example + "`) excluded from the two sections above in both directions."
+      ]);
+    }
     pushRef("Entry points", entryFiles.map((file) => "- `" + file + "`"));
     if (readme) {
       pushRef("Module README", [readme]);
@@ -9593,6 +9634,13 @@ function bumpNestedCount(map, key, inner) {
   bucket.set(inner, (bucket.get(inner) ?? 0) + 1);
   map.set(key, bucket);
 }
+function isTestSourceFile(filePath) {
+  return TEST_SOURCE_FILE.test(filePath);
+}
+function recordExcludedTestEdge(map, moduleName, testFile) {
+  const current = map.get(moduleName);
+  map.set(moduleName, { count: (current?.count ?? 0) + 1, example: current?.example ?? testFile });
+}
 function sumCounts(bucket) {
   if (!bucket) {
     return 0;
@@ -10196,7 +10244,7 @@ function compareSemver(a, b) {
   }
   return 0;
 }
-var EXTERNAL_LINK, DEFAULT_COLLECT_LIMIT = 500, MIN_MODULE_FILES = 2, DEFAULT_EVIDENCE_BUDGET_TOKENS = 4000, DEFAULT_EVIDENCE_MAX_ITEMS = 8, WIKI_PAGE_PRODUCERS;
+var EXTERNAL_LINK, DEFAULT_COLLECT_LIMIT = 500, MIN_MODULE_FILES = 2, DEFAULT_EVIDENCE_BUDGET_TOKENS = 4000, DEFAULT_EVIDENCE_MAX_ITEMS = 8, WIKI_PAGE_PRODUCERS, TEST_SOURCE_FILE;
 var init_service2 = __esm(() => {
   init_fs();
   init_guard();
@@ -10207,6 +10255,7 @@ var init_service2 = __esm(() => {
   init_section_index();
   init_section_tombstone();
   init_staleness2();
+  init_think_tags();
   init_templates();
   init_types2();
   EXTERNAL_LINK = /^(https?:|mailto:|tel:)/i;
@@ -10217,6 +10266,7 @@ var init_service2 = __esm(() => {
       path: /^decisions\/sac-[a-z]+-[0-9a-f]+\.md$/
     }
   ];
+  TEST_SOURCE_FILE = /(?:^|\/)[^/]*\.(?:test|spec)\.[cm]?[jt]sx?$/;
 });
 
 // src/gdgraph/wiki-layer.ts
@@ -22819,6 +22869,54 @@ function readToolCalls(value) {
   }
   return calls.length > 0 ? calls : undefined;
 }
+function readReplayItems(value) {
+  if (!Array.isArray(value)) {
+    return;
+  }
+  const items = [];
+  for (const entry of value) {
+    if (entry === null || typeof entry !== "object") {
+      continue;
+    }
+    const record = entry;
+    const { providerId, kind } = record;
+    if (typeof providerId !== "string" || providerId.length === 0) {
+      continue;
+    }
+    if (typeof kind !== "string" || kind.length === 0) {
+      continue;
+    }
+    if (!("data" in record)) {
+      continue;
+    }
+    items.push({ providerId, kind, data: record.data });
+  }
+  return items.length > 0 ? items : undefined;
+}
+function readReasoning(value) {
+  if (value === null || typeof value !== "object") {
+    return;
+  }
+  const record = value;
+  const out = {};
+  if (typeof record.text === "string" && record.text.length > 0) {
+    out.text = record.text;
+  }
+  if (record.redacted === true) {
+    out.redacted = true;
+  }
+  const replay = readReplayItems(record.replay);
+  if (replay !== undefined) {
+    out.replay = replay;
+  }
+  if (typeof record.durationMs === "number" && Number.isFinite(record.durationMs) && record.durationMs >= 0) {
+    out.durationMs = record.durationMs;
+  }
+  if (typeof record.tokens === "number" && Number.isFinite(record.tokens) && record.tokens >= 0) {
+    out.tokens = record.tokens;
+  }
+  return Object.keys(out).length > 0 ? out : undefined;
+}
 function nowIso2() {
   return new Date().toISOString();
 }
@@ -22891,12 +22989,15 @@ function readJsonl2(file) {
         continue;
       }
       const toolCalls = readToolCalls(o.toolCalls);
+      const reasoning = readReasoning(o.reasoning);
       out.push({
         role: o.role,
         content: o.content,
         ...o.provenance === "trusted" || o.provenance === "project" || o.provenance === "model" || o.provenance === "tool" ? { provenance: o.provenance } : {},
         ...toolCalls !== undefined ? { toolCalls } : {},
-        ...typeof o.toolCallId === "string" && o.toolCallId.length > 0 ? { toolCallId: o.toolCallId } : {}
+        ...typeof o.toolCallId === "string" && o.toolCallId.length > 0 ? { toolCallId: o.toolCallId } : {},
+        ...typeof o.ts === "string" && o.ts.length > 0 ? { ts: o.ts } : {},
+        ...reasoning !== undefined ? { reasoning } : {}
       });
     } catch {}
   }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@mrciphersmith/keryx",
-  "version": "0.2.112",
+  "version": "0.2.114",
   "description": "Version-controlled project context for AI coding agents: code graph, architecture wiki, project memory, relevant tests, quality signals, and task flows.",
   "private": false,
   "publishConfig": {