@morscherlab/mint-sdk 1.2.0-beta.1 → 1.2.0-beta.11

package/dist/templates/builderReadUtils.d.ts

@@ -1,4 +1,4 @@
-export declare function isRecord(value: unknown): value is Record<string, unknown>;
+export { isRecord } from '../utils/records';
 export declare function readStringList(value: unknown, fallback: string[]): string[];
 export declare function readNumberList(value: unknown, fallback: number[]): number[];
 export declare function readString(value: unknown, fallback: string): string;

package/dist/templates/index.js

@@ -1,5 +1,3 @@
-import "../experiment-utils-CLnzPPq5.js";
-import "../EmptyState-p90quq8Z.js";
-import "../useControlSchema-BDx2Olha.js";
-import { $ as toTimeCourseRows, $t as listBioTemplatePacks, A as createSamplePrepTemplate, At as toCalibrationCurveRows, B as toBioTemplateComponentProps, Bt as validatePlateMapData, C as createFlowCytometryPanelTemplate, Ct as toInstrumentRunScheduleEvents, D as createTimeCourseTemplate, Dt as toFlowPanelRows, E as createProtocolStepsTemplate, Et as toFlowPanelDataFrame, F as getBioTemplateComponentProps, Ft as validateAssayMatrixData, G as toTemplateDataFrame, Gt as validateSampleSheetData, H as toBioTemplateComponentPropsById, Ht as validateQpcrPlateData, I as listBioTemplateComponentBindings, It as validateCalibrationCurveData, J as toDoseLayoutState, Jt as getBioTemplatePresetInfo, K as toWellMapArray, Kt as validateTimeCourseData, L as toBioTemplateComponentBindings, Lt as validateDoseResponseData, M as createPlateMapTemplate, Mt as toAssayMatrixDataFrame, N as bioTemplatePresetControlValuesToOptions, Nt as toAssayMatrixRows, O as createCalibrationCurveTemplate, Ot as toCalibrationCurveColumns, P as getBioTemplateComponentBindings, Pt as toAssayMatrixSampleOptions, Q as toTimeCourseDataFrame, Qt as getBioTemplatePackInfo, R as toBioTemplateComponentBindingsById, Rt as validateFlowCytometryPanelData, S as createInstrumentRunTemplate, St as toInstrumentRunRows, T as createAssayMatrixTemplate, Tt as toFlowPanelColumns, U as toBioTemplateComponentSnippets, Ut as validateReagentListData, V as toBioTemplateComponentPropsByComponent, Vt as validateProtocolStepsData, W as toBioTemplateComponentUsage, Wt as validateSamplePrepData, X as toWellPlateWells, Xt as searchBioTemplatePresets, Y as toPlateMapEditorState, Yt as listBioTemplatePresets, Z as toTimeCourseColumns, Zt as bioTemplatePacks, _ as createElisaAssayCollection, _t as toProtocolDataFrame, a as getBioTemplateControlDefaults, an as TEMPLATE_COLLECTION_KEY, at as toSamplePrepColumns, b as createQpcrExpressionCollection, bt as toInstrumentRunColumns, c as listBioTemplatePresetControlSchemas, cn as createTemplateEnvelope, ct as toReagentColumns, d as createBioTemplatePresetCollectionFromControls, dn as extractTemplateCollection, dt as toReagentRows, en as searchBioTemplatePacks, et as toTimeCourseSteps, f as createWellPlateScreenCollection, fn as getTemplateData, ft as toQpcrColumns, g as createFlowCytometryAssayCollection, gt as toProtocolColumns, h as createWesternBlotAssayCollection, ht as toQpcrWellPlateWells, i as createBioTemplateControlToolkit, in as searchBioTemplateCatalog, it as toSampleRows, j as createSampleSheetTemplate, jt as toAssayMatrixColumns, k as createDoseResponseTemplate, kt as toCalibrationCurveDataFrame, l as requireBioTemplateControlSchema, ln as ensureTemplateEnvelope, lt as toReagentDataFrame, m as createDefaultBioTemplate, mt as toQpcrRows, n as bioTemplateControlsToSectionFormSchemas, nn as getBioTemplateInfo, nt as toSampleDataFrame, o as getBioTemplateControlSchema, on as assertTemplateEnvelope, ot as toSamplePrepDataFrame, p as createBioTemplatePackCollection, pt as toQpcrDataFrame, q as toDoseConditions, qt as bioTemplatePresets, r as bioTemplateControlsToSidebarPanels, rn as listBioTemplateCatalog, rt as toSampleOptions, s as listBioTemplateControlSchemas, sn as createTemplateCollection, st as toSamplePrepRows, t as bioTemplateControlsToFormSchema, tn as bioTemplateCatalog, tt as toSampleColumns, u as createBioTemplatePresetCollection, un as ensureTemplateFromCollection, ut as toReagentListItems, v as createTargetedMetabolomicsCollection, vt as toProtocolRows, w as createReagentListTemplate, wt as toInstrumentRunSteps, x as createQpcrPlateTemplate, xt as toInstrumentRunDataFrame, y as createLcmsBatchCollection, yt as toProtocolSteps, z as toBioTemplateComponentImports, zt as validateInstrumentRunData } from "../templates-DsP51i-S.js";
+import "../useControlSchema-aMZlb4Sc.js";
+import { $ as toTimeCourseRows, $t as listBioTemplatePacks, A as createSamplePrepTemplate, At as toCalibrationCurveRows, B as toBioTemplateComponentProps, Bt as validatePlateMapData, C as createFlowCytometryPanelTemplate, Ct as toInstrumentRunScheduleEvents, D as createTimeCourseTemplate, Dt as toFlowPanelRows, E as createProtocolStepsTemplate, Et as toFlowPanelDataFrame, F as getBioTemplateComponentProps, Ft as validateAssayMatrixData, G as toTemplateDataFrame, Gt as validateSampleSheetData, H as toBioTemplateComponentPropsById, Ht as validateQpcrPlateData, I as listBioTemplateComponentBindings, It as validateCalibrationCurveData, J as toDoseLayoutState, Jt as getBioTemplatePresetInfo, K as toWellMapArray, Kt as validateTimeCourseData, L as toBioTemplateComponentBindings, Lt as validateDoseResponseData, M as createPlateMapTemplate, Mt as toAssayMatrixDataFrame, N as bioTemplatePresetControlValuesToOptions, Nt as toAssayMatrixRows, O as createCalibrationCurveTemplate, Ot as toCalibrationCurveColumns, P as getBioTemplateComponentBindings, Pt as toAssayMatrixSampleOptions, Q as toTimeCourseDataFrame, Qt as getBioTemplatePackInfo, R as toBioTemplateComponentBindingsById, Rt as validateFlowCytometryPanelData, S as createInstrumentRunTemplate, St as toInstrumentRunRows, T as createAssayMatrixTemplate, Tt as toFlowPanelColumns, U as toBioTemplateComponentSnippets, Ut as validateReagentListData, V as toBioTemplateComponentPropsByComponent, Vt as validateProtocolStepsData, W as toBioTemplateComponentUsage, Wt as validateSamplePrepData, X as toWellPlateWells, Xt as searchBioTemplatePresets, Y as toPlateMapEditorState, Yt as listBioTemplatePresets, Z as toTimeCourseColumns, Zt as bioTemplatePacks, _ as createElisaAssayCollection, _t as toProtocolDataFrame, a as getBioTemplateControlDefaults, an as TEMPLATE_COLLECTION_KEY, at as toSamplePrepColumns, b as createQpcrExpressionCollection, bt as toInstrumentRunColumns, c as listBioTemplatePresetControlSchemas, cn as createTemplateEnvelope, ct as toReagentColumns, d as createBioTemplatePresetCollectionFromControls, dn as extractTemplateCollection, dt as toReagentRows, en as searchBioTemplatePacks, et as toTimeCourseSteps, f as createWellPlateScreenCollection, fn as getTemplateData, ft as toQpcrColumns, g as createFlowCytometryAssayCollection, gt as toProtocolColumns, h as createWesternBlotAssayCollection, ht as toQpcrWellPlateWells, i as createBioTemplateControlToolkit, in as searchBioTemplateCatalog, it as toSampleRows, j as createSampleSheetTemplate, jt as toAssayMatrixColumns, k as createDoseResponseTemplate, kt as toCalibrationCurveDataFrame, l as requireBioTemplateControlSchema, ln as ensureTemplateEnvelope, lt as toReagentDataFrame, m as createDefaultBioTemplate, mt as toQpcrRows, n as bioTemplateControlsToSectionFormSchemas, nn as getBioTemplateInfo, nt as toSampleDataFrame, o as getBioTemplateControlSchema, on as assertTemplateEnvelope, ot as toSamplePrepDataFrame, p as createBioTemplatePackCollection, pt as toQpcrDataFrame, q as toDoseConditions, qt as bioTemplatePresets, r as bioTemplateControlsToSidebarPanels, rn as listBioTemplateCatalog, rt as toSampleOptions, s as listBioTemplateControlSchemas, sn as createTemplateCollection, st as toSamplePrepRows, t as bioTemplateControlsToFormSchema, tn as bioTemplateCatalog, tt as toSampleColumns, u as createBioTemplatePresetCollection, un as ensureTemplateFromCollection, ut as toReagentListItems, v as createTargetedMetabolomicsCollection, vt as toProtocolRows, w as createReagentListTemplate, wt as toInstrumentRunSteps, x as createQpcrPlateTemplate, xt as toInstrumentRunDataFrame, y as createLcmsBatchCollection, yt as toProtocolSteps, z as toBioTemplateComponentImports, zt as validateInstrumentRunData } from "../templates-Qq113pyZ.js";
 export { TEMPLATE_COLLECTION_KEY, assertTemplateEnvelope, bioTemplateCatalog, bioTemplateControlsToFormSchema, bioTemplateControlsToSectionFormSchemas, bioTemplateControlsToSidebarPanels, bioTemplatePacks, bioTemplatePresetControlValuesToOptions, bioTemplatePresets, createAssayMatrixTemplate, createBioTemplateControlToolkit, createBioTemplatePackCollection, createBioTemplatePresetCollection, createBioTemplatePresetCollectionFromControls, createCalibrationCurveTemplate, createDefaultBioTemplate, createDoseResponseTemplate, createElisaAssayCollection, createFlowCytometryAssayCollection, createFlowCytometryPanelTemplate, createInstrumentRunTemplate, createLcmsBatchCollection, createPlateMapTemplate, createProtocolStepsTemplate, createQpcrExpressionCollection, createQpcrPlateTemplate, createReagentListTemplate, createSamplePrepTemplate, createSampleSheetTemplate, createTargetedMetabolomicsCollection, createTemplateCollection, createTemplateEnvelope, createTimeCourseTemplate, createWellPlateScreenCollection, createWesternBlotAssayCollection, ensureTemplateEnvelope, ensureTemplateFromCollection, extractTemplateCollection, getBioTemplateComponentBindings, getBioTemplateComponentProps, getBioTemplateControlDefaults, getBioTemplateControlSchema, getBioTemplateInfo, getBioTemplatePackInfo, getBioTemplatePresetInfo, getTemplateData, listBioTemplateCatalog, listBioTemplateComponentBindings, listBioTemplateControlSchemas, listBioTemplatePacks, listBioTemplatePresetControlSchemas, listBioTemplatePresets, requireBioTemplateControlSchema, searchBioTemplateCatalog, searchBioTemplatePacks, searchBioTemplatePresets, toAssayMatrixColumns, toAssayMatrixDataFrame, toAssayMatrixRows, toAssayMatrixSampleOptions, toBioTemplateComponentBindings, toBioTemplateComponentBindingsById, toBioTemplateComponentImports, toBioTemplateComponentProps, toBioTemplateComponentPropsByComponent, toBioTemplateComponentPropsById, toBioTemplateComponentSnippets, toBioTemplateComponentUsage, toCalibrationCurveColumns, toCalibrationCurveDataFrame, toCalibrationCurveRows, toDoseConditions, toDoseLayoutState, toFlowPanelColumns, toFlowPanelDataFrame, toFlowPanelRows, toInstrumentRunColumns, toInstrumentRunDataFrame, toInstrumentRunRows, toInstrumentRunScheduleEvents, toInstrumentRunSteps, toPlateMapEditorState, toProtocolColumns, toProtocolDataFrame, toProtocolRows, toProtocolSteps, toQpcrColumns, toQpcrDataFrame, toQpcrRows, toQpcrWellPlateWells, toReagentColumns, toReagentDataFrame, toReagentListItems, toReagentRows, toSampleColumns, toSampleDataFrame, toSampleOptions, toSamplePrepColumns, toSamplePrepDataFrame, toSamplePrepRows, toSampleRows, toTemplateDataFrame, toTimeCourseColumns, toTimeCourseDataFrame, toTimeCourseRows, toTimeCourseSteps, toWellMapArray, toWellPlateWells, validateAssayMatrixData, validateCalibrationCurveData, validateDoseResponseData, validateFlowCytometryPanelData, validateInstrumentRunData, validatePlateMapData, validateProtocolStepsData, validateQpcrPlateData, validateReagentListData, validateSamplePrepData, validateSampleSheetData, validateTimeCourseData };

package/dist/{templates-DsP51i-S.js → templates-Qq113pyZ.js}

@@ -1,8 +1,287 @@
-import { _ as controlsToFormSchema, i as useControlSchema, r as getControlDefaults, x as controlsToSidebarPanels, y as controlsToSectionFormSchemas } from "./useControlSchema-BDx2Olha.js";
-//#region src/templates/builderReadUtils.ts
-function isRecord$2(value) {
-	return typeof value === "object" && value !== null && !Array.isArray(value);
+import { _ as controlsToFormSchema, i as useControlSchema, nt as isObjectLike, r as getControlDefaults, rt as isRecord, x as controlsToSidebarPanels, y as controlsToSectionFormSchemas } from "./useControlSchema-aMZlb4Sc.js";
+//#region src/utils/color.ts
+/**
+* Canonical categorical scale for sample types, plate maps, dose-response
+* series and legends. Mirrors `--mint-sample-1` … `--mint-sample-9`.
+*/
+var SAMPLE_COLOR_SCALE = [
+	"#3B82F6",
+	"#10B981",
+	"#EF4444",
+	"#F59E0B",
+	"#8B5CF6",
+	"#F97316",
+	"#06B6D4",
+	"#14B8A6",
+	"#6B7280"
+];
+/**
+* Slot-position colors shared by `PlateMapEditor` and `RackEditor`.
+* Mirrors `--mint-slot-r`, `--mint-slot-g`, `--mint-slot-b`, `--mint-slot-y`.
+*/
+var SLOT_COLORS = {
+	R: "#ef4444",
+	G: "#22c55e",
+	B: "#3b82f6",
+	Y: "#eab308"
+};
+/** Slot positions in their canonical display order. */
+var SLOT_ORDER = [
+	"R",
+	"G",
+	"B",
+	"Y"
+];
+var HEX_RE = /^#?([0-9a-f]{3}|[0-9a-f]{6})$/i;
+function clamp(n, min, max) {
+	return Math.min(max, Math.max(min, n));
+}
+function hexToHsl(hex) {
+	const match = HEX_RE.exec(hex.trim());
+	if (!match) return {
+		h: 0,
+		s: 0,
+		l: 50
+	};
+	let raw = match[1];
+	if (raw.length === 3) raw = raw.split("").map((c) => c + c).join("");
+	const r = parseInt(raw.slice(0, 2), 16) / 255;
+	const g = parseInt(raw.slice(2, 4), 16) / 255;
+	const b = parseInt(raw.slice(4, 6), 16) / 255;
+	const max = Math.max(r, g, b);
+	const min = Math.min(r, g, b);
+	const delta = max - min;
+	let h = 0;
+	if (delta !== 0) if (max === r) h = (g - b) / delta % 6;
+	else if (max === g) h = (b - r) / delta + 2;
+	else h = (r - g) / delta + 4;
+	h = (h * 60 + 360) % 360;
+	const l = (max + min) / 2;
+	const s = delta === 0 ? 0 : delta / (1 - Math.abs(2 * l - 1));
+	return {
+		h,
+		s: s * 100,
+		l: l * 100
+	};
+}
+function hslToHex(h, s, l) {
+	const sNorm = clamp(s, 0, 100) / 100;
+	const lNorm = clamp(l, 0, 100) / 100;
+	const hNorm = (h % 360 + 360) % 360;
+	const c = (1 - Math.abs(2 * lNorm - 1)) * sNorm;
+	const x = c * (1 - Math.abs(hNorm / 60 % 2 - 1));
+	const m = lNorm - c / 2;
+	let r = 0, g = 0, b = 0;
+	if (hNorm < 60) [r, g, b] = [
+		c,
+		x,
+		0
+	];
+	else if (hNorm < 120) [r, g, b] = [
+		x,
+		c,
+		0
+	];
+	else if (hNorm < 180) [r, g, b] = [
+		0,
+		c,
+		x
+	];
+	else if (hNorm < 240) [r, g, b] = [
+		0,
+		x,
+		c
+	];
+	else if (hNorm < 300) [r, g, b] = [
+		x,
+		0,
+		c
+	];
+	else [r, g, b] = [
+		c,
+		0,
+		x
+	];
+	const toHex = (n) => Math.round((n + m) * 255).toString(16).padStart(2, "0");
+	return `#${toHex(r)}${toHex(g)}${toHex(b)}`;
+}
+/**
+* Derive a same-hue-family shade of `parentHex` for child at `index` of `total`.
+*
+* Lightness is distributed evenly within [35, 75] so all children remain
+* readable on light/dark backgrounds. Hue and saturation are inherited from
+* the parent. With `total <= 1`, returns the parent unchanged.
+*
+* Children are ordered light → dark by index, so index 0 is the brightest
+* sibling and index `total - 1` is the darkest.
+*/
+function deriveShade(parentHex, index, total) {
+	if (total <= 1) return parentHex;
+	const { h, s, l } = hexToHsl(parentHex);
+	const L_MIN = 35;
+	const L_MAX = 75;
+	const spread = Math.min(L_MAX - L_MIN, 40);
+	const center = clamp(l, L_MIN + spread / 2, L_MAX - spread / 2);
+	const top = center + spread / 2;
+	const bot = center - spread / 2;
+	const childL = top - (total === 1 ? .5 : index / (total - 1)) * (top - bot);
+	return hslToHex(h, clamp(s, 35, 100), childL);
+}
+//#endregion
+//#region src/components/WellPlate.geometry.ts
+var PLATE_CONFIGS = {
+	6: {
+		rows: 2,
+		cols: 3
+	},
+	12: {
+		rows: 3,
+		cols: 4
+	},
+	24: {
+		rows: 4,
+		cols: 6
+	},
+	48: {
+		rows: 6,
+		cols: 8
+	},
+	54: {
+		rows: 6,
+		cols: 9
+	},
+	96: {
+		rows: 8,
+		cols: 12
+	},
+	384: {
+		rows: 16,
+		cols: 24
+	}
+};
+var WELL_PLATE_SIZE_CONFIGS = {
+	sm: {
+		cellWidth: "40px",
+		cellHeight: "40px",
+		headerWidth: "32px",
+		headerHeight: "32px",
+		fontSize: "0.625rem",
+		gap: "2px"
+	},
+	md: {
+		cellWidth: "56px",
+		cellHeight: "32px",
+		headerWidth: "32px",
+		headerHeight: "24px",
+		fontSize: "0.75rem",
+		gap: "3px"
+	},
+	lg: {
+		cellWidth: "80px",
+		cellHeight: "40px",
+		headerWidth: "40px",
+		headerHeight: "32px",
+		fontSize: "0.875rem",
+		gap: "4px"
+	},
+	xl: {
+		cellWidth: "96px",
+		cellHeight: "48px",
+		headerWidth: "48px",
+		headerHeight: "40px",
+		fontSize: "1rem",
+		gap: "4px"
+	},
+	fill: {
+		cellWidth: "100%",
+		cellHeight: "32px",
+		headerWidth: "32px",
+		headerHeight: "24px",
+		fontSize: "0.75rem",
+		gap: "2px"
+	}
+};
+/**
+* Spreadsheet-style row label for a zero-based row index: A…Z, then AA, AB, …
+*
+* This is the single row-label generator for the SDK — plate grids, rack
+* grids, well-id parsing and the template builders all go through it.
+*/
+function rowLabel(index) {
+	let label = "";
+	let current = index;
+	for (;;) {
+		label = String.fromCharCode(65 + current % 26) + label;
+		current = Math.floor(current / 26) - 1;
+		if (current < 0) return label;
+	}
+}
+/** Inverse of {@link rowLabel}: 'A' → 0, 'Z' → 25, 'AA' → 26. */
+function rowIndex(label) {
+	return [...label].reduce((value, char) => value * 26 + char.charCodeAt(0) - 64, 0) - 1;
+}
+function createPlateRowLabels(config) {
+	return Array.from({ length: config.rows }, (_, index) => rowLabel(index));
+}
+function plateConfigOrThrow(format) {
+	const config = PLATE_CONFIGS[format];
+	if (!config) throw new Error(`Unsupported plate format '${format}'.`);
+	return config;
+}
+/** Every well id of a plate, row-major (A1, A2, … B1, …). */
+function wellIdsForFormat(format) {
+	const { rows, cols } = plateConfigOrThrow(format);
+	return Array.from({ length: rows }, (_, row) => Array.from({ length: cols }, (_col, col) => `${rowLabel(row)}${col + 1}`)).flat();
+}
+/** Throw unless `wellId` names a well that exists on a `format`-well plate. */
+function assertWellInFormat(wellId, format) {
+	const { rows, cols } = plateConfigOrThrow(format);
+	const match = /^([A-Z]+)([1-9][0-9]*)$/.exec(wellId.toUpperCase());
+	if (!match) throw new Error(`Invalid well id '${wellId}'.`);
+	const row = rowIndex(match[1]);
+	const col = Number(match[2]) - 1;
+	if (row < 0 || col < 0 || row >= rows || col >= cols) throw new Error(`Well '${wellId}' is outside a ${format}-well plate.`);
+}
+/** Coerce an unknown value to a supported plate format, else `fallback`. */
+function readPlateFormat(value, fallback) {
+	const parsed = typeof value === "number" ? value : typeof value === "string" ? Number(value) : NaN;
+	return parsed in PLATE_CONFIGS ? parsed : fallback;
+}
+function createPlateColumnLabels(config) {
+	return Array.from({ length: config.cols }, (_, index) => index + 1);
+}
+function createWellGrid(config, rowLabels, wells) {
+	const grid = [];
+	for (let row = 0; row < config.rows; row++) {
+		const rowWells = [];
+		for (let col = 0; col < config.cols; col++) {
+			const id = `${rowLabels[row]}${col + 1}`;
+			const wellData = wells[id] || {};
+			rowWells.push({
+				id,
+				row,
+				col,
+				state: wellData.state || "empty",
+				sampleType: wellData.sampleType,
+				value: wellData.value,
+				metadata: wellData.metadata
+			});
+		}
+		grid.push(rowWells);
+	}
+	return grid;
+}
+function getRectangleWellIds(start, end, rowLabels) {
+	const minRow = Math.min(start.row, end.row);
+	const maxRow = Math.max(start.row, end.row);
+	const minCol = Math.min(start.col, end.col);
+	const maxCol = Math.max(start.col, end.col);
+	const wells = /* @__PURE__ */ new Set();
+	for (let row = minRow; row <= maxRow; row++) for (let col = minCol; col <= maxCol; col++) wells.add(`${rowLabels[row]}${col + 1}`);
+	return wells;
 }
+//#endregion
+//#region src/templates/builderReadUtils.ts
 function readStringList(value, fallback) {
 	if (Array.isArray(value)) {
 		const items = value.map((item) => String(item).trim()).filter(Boolean);
@@ -65,10 +344,10 @@ function extractTemplateCollection(value) {
 		assertGenericTemplateEnvelope(value);
 		return { [value.template_id]: value };
 	}
-	if (!isRecord$2(value)) throw new Error("Template collection payload must be an object.");
+	if (!isRecord(value)) throw new Error("Template collection payload must be an object.");
 	const rawCollection = value[TEMPLATE_COLLECTION_KEY];
 	if (rawCollection === void 0) return {};
-	if (!isRecord$2(rawCollection)) throw new Error("Template collection must be an object.");
+	if (!isRecord(rawCollection)) throw new Error("Template collection must be an object.");
 	const collection = {};
 	for (const [templateId, template] of Object.entries(rawCollection)) {
 		assertGenericTemplateEnvelope(template);
@@ -99,14 +378,14 @@ function getTemplateData(template, templateId) {
 	return template;
 }
 function assertGenericTemplateEnvelope(value) {
-	if (!isRecord$2(value)) throw new Error("Template envelope must be an object.");
+	if (!isRecord(value)) throw new Error("Template envelope must be an object.");
 	if (typeof value.template_id !== "string" || value.template_id.length === 0) throw new Error("Template envelope requires a template_id string.");
 	if (typeof value.template_version !== "string" || value.template_version.length === 0) throw new Error("Template envelope requires a template_version string.");
-	if (!isRecord$2(value.data)) throw new Error("Template envelope data must be an object.");
-	if ("metadata" in value && !isRecord$2(value.metadata)) throw new Error("Template envelope metadata must be an object.");
+	if (!isRecord(value.data)) throw new Error("Template envelope data must be an object.");
+	if ("metadata" in value && !isRecord(value.metadata)) throw new Error("Template envelope metadata must be an object.");
 }
 function isEnvelope(value) {
-	return isRecord$2(value) && "template_id" in value && "data" in value;
+	return isRecord(value) && "template_id" in value && "data" in value;
 }
 //#endregion
 //#region src/templates/lookup.ts
@@ -956,19 +1235,16 @@ function resolveComponentTemplateIds(target) {
 	return Object.keys(extractTemplateCollection(target)).map((templateId) => getBioTemplateInfo(templateId)?.template_id).filter((templateId) => templateId !== void 0);
 }
 function isTemplateEnvelope$1(value) {
-	return isRecord$1(value) && typeof value.template_id === "string" && "data" in value;
+	return isObjectLike(value) && typeof value.template_id === "string" && "data" in value;
 }
 function collectionPresetName$1(value) {
-	if (!isRecord$1(value) || !isRecord$1(value.metadata)) return void 0;
+	if (!isObjectLike(value) || !isObjectLike(value.metadata)) return void 0;
 	return typeof value.metadata.preset === "string" ? value.metadata.preset : void 0;
 }
 function collectionPackName$1(value) {
-	if (!isRecord$1(value) || !isRecord$1(value.metadata)) return void 0;
+	if (!isObjectLike(value) || !isObjectLike(value.metadata)) return void 0;
 	return typeof value.metadata.pack === "string" ? value.metadata.pack : void 0;
 }
-function isRecord$1(value) {
-	return typeof value === "object" && value !== null;
-}
 //#endregion
 //#region src/templates/componentBindingHelpers.ts
 function cloneBindingMap(bindings) {
@@ -1126,49 +1402,6 @@ function binding(templateId, component, adapters, props, description) {
 	};
 }
 //#endregion
-//#region src/templates/plateGeometry.ts
-var PLATE_DIMENSIONS = {
-	6: [2, 3],
-	12: [3, 4],
-	24: [4, 6],
-	48: [6, 8],
-	54: [6, 9],
-	96: [8, 12],
-	384: [16, 24]
-};
-function wellIdsForFormat(format) {
-	const dimensions = PLATE_DIMENSIONS[format];
-	if (!dimensions) throw new Error(`Unsupported plate format '${format}'.`);
-	const [rows, cols] = dimensions;
-	return Array.from({ length: rows }, (_, row) => Array.from({ length: cols }, (_col, col) => `${rowLabel(row)}${col + 1}`)).flat();
-}
-function assertWellInFormat(wellId, format) {
-	const dimensions = PLATE_DIMENSIONS[format];
-	if (!dimensions) throw new Error(`Unsupported plate format '${format}'.`);
-	const match = /^([A-Z]+)([1-9][0-9]*)$/.exec(wellId.toUpperCase());
-	if (!match) throw new Error(`Invalid well id '${wellId}'.`);
-	const row = rowIndex(match[1]);
-	const col = Number(match[2]) - 1;
-	const [rows, cols] = dimensions;
-	if (row < 0 || col < 0 || row >= rows || col >= cols) throw new Error(`Well '${wellId}' is outside a ${format}-well plate.`);
-}
-function readPlateFormat(value, fallback) {
-	const parsed = typeof value === "number" ? value : typeof value === "string" ? Number(value) : NaN;
-	return parsed in PLATE_DIMENSIONS ? parsed : fallback;
-}
-function rowLabel(index) {
-	let label = "";
-	let current = index;
-	while (true) {
-		label = String.fromCharCode(65 + current % 26) + label;
-		current = Math.floor(current / 26) - 1;
-		if (current < 0) return label;
-	}
-}
-function rowIndex(label) {
-	return [...label].reduce((value, char) => value * 26 + char.charCodeAt(0) - 64, 0) - 1;
-}
-//#endregion
 //#region src/templates/templateValidators.ts
 function validatePlateMapData(data) {
 	if (!Array.isArray(data.plates) || data.plates.length === 0) throw new Error("Plate-map template requires at least one plate.");
@@ -2319,23 +2552,12 @@ function toWellPlateWells(template, plateId) {
 }
 //#endregion
 //#region src/templates/doseResponseAdapters.ts
-var CONDITION_COLORS = [
-	"#3B82F6",
-	"#10B981",
-	"#EF4444",
-	"#F59E0B",
-	"#8B5CF6",
-	"#F97316",
-	"#06B6D4",
-	"#14B8A6",
-	"#6B7280"
-];
 function toDoseConditions(template) {
 	const data = getTemplateData(template, "dose-response");
 	validateDoseResponseData(data);
 	return data.compounds.map((compound, index) => ({
 		label: compound.name,
-		color: String(compound.metadata?.color ?? CONDITION_COLORS[index % CONDITION_COLORS.length]),
+		color: String(compound.metadata?.color ?? SAMPLE_COLOR_SCALE[index % SAMPLE_COLOR_SCALE.length]),
 		concentrations: compound.concentrations,
 		unit: data.unit
 	}));
@@ -2381,16 +2603,7 @@ function legendItemsFromPlateState(state) {
 	}));
 }
 function colorForIndex(index) {
-	const colors = [
-		"#3B82F6",
-		"#10B981",
-		"#EF4444",
-		"#F59E0B",
-		"#8B5CF6",
-		"#F97316",
-		"#06B6D4",
-		"#14B8A6"
-	];
+	const colors = SAMPLE_COLOR_SCALE.slice(0, 8);
 	return colors[index % colors.length];
 }
 //#endregion
@@ -2734,19 +2947,6 @@ function bioTemplatePresetControlValuesToOptions(name, values) {
 	throw new Error(`Unknown template preset '${name}'.`);
 }
 //#endregion
-//#region src/templates/builderDefaults.ts
-var DEFAULT_SAMPLE_COLORS = [
-	"#3B82F6",
-	"#10B981",
-	"#EF4444",
-	"#F59E0B",
-	"#8B5CF6",
-	"#F97316",
-	"#06B6D4",
-	"#14B8A6",
-	"#6B7280"
-];
-//#endregion
 //#region src/templates/builderIdUtils.ts
 function sampleIdFromName(name, index) {
 	return idFromName(name, `sample-${index + 1}`);
@@ -2770,7 +2970,7 @@ function createPlateMapTemplate(options = {}) {
 		return {
 			id: sampleIdFromName(sample, index),
 			name: sample,
-			color: DEFAULT_SAMPLE_COLORS[index % DEFAULT_SAMPLE_COLORS.length]
+			color: SAMPLE_COLOR_SCALE[index % SAMPLE_COLOR_SCALE.length]
 		};
 	});
 	return createTemplateEnvelope("plate-map", {
@@ -3073,7 +3273,7 @@ function createTimeCourseTemplate(options) {
 		return {
 			id: idFromName(condition, `condition-${index + 1}`),
 			name: condition,
-			color: DEFAULT_SAMPLE_COLORS[index % DEFAULT_SAMPLE_COLORS.length],
+			color: SAMPLE_COLOR_SCALE[index % SAMPLE_COLOR_SCALE.length],
 			metadata: {}
 		};
 	});
@@ -3688,7 +3888,7 @@ function createElisaAssayCollection(options = {}) {
 				...sampleRecords.map((sample, index) => ({
 					id: sample.sampleId,
 					name: sample.name ?? sample.sampleId,
-					color: DEFAULT_SAMPLE_COLORS[index % DEFAULT_SAMPLE_COLORS.length]
+					color: SAMPLE_COLOR_SCALE[index % SAMPLE_COLOR_SCALE.length]
 				}))
 			]
 		}),
@@ -4030,7 +4230,7 @@ function createWellPlateScreenCollection(options = {}) {
 		samples: sampleRecords.map((sample, index) => ({
 			id: sample.sampleId,
 			name: sample.name ?? sample.sampleId,
-			color: DEFAULT_SAMPLE_COLORS[index % DEFAULT_SAMPLE_COLORS.length]
+			color: SAMPLE_COLOR_SCALE[index % SAMPLE_COLOR_SCALE.length]
 		}))
 	});
 	return createTemplateCollection([
@@ -4167,19 +4367,16 @@ function describeControlTarget(target) {
 	return collectionPresetName(target) ?? collectionPackName(target) ?? "template collection";
 }
 function isTemplateEnvelope(value) {
-	return isRecord(value) && typeof value.template_id === "string" && "data" in value;
+	return isObjectLike(value) && typeof value.template_id === "string" && "data" in value;
 }
 function collectionPresetName(value) {
-	if (!isRecord(value) || !isRecord(value.metadata)) return void 0;
+	if (!isObjectLike(value) || !isObjectLike(value.metadata)) return void 0;
 	return typeof value.metadata.preset === "string" ? value.metadata.preset : void 0;
 }
 function collectionPackName(value) {
-	if (!isRecord(value) || !isRecord(value.metadata)) return void 0;
+	if (!isObjectLike(value) || !isObjectLike(value.metadata)) return void 0;
 	return typeof value.metadata.pack === "string" ? value.metadata.pack : void 0;
 }
-function isRecord(value) {
-	return typeof value === "object" && value !== null;
-}
 //#endregion
 //#region src/templates/controlSchemaConstants.ts
 var ICONS = {
@@ -5058,6 +5255,6 @@ function getBioTemplateControlDefaults(target) {
 	return getControlDefaults(requireBioTemplateControlSchema(target));
 }
 //#endregion
-export { toTimeCourseRows as $, listBioTemplatePacks as $t, createSamplePrepTemplate as A, toCalibrationCurveRows as At, toBioTemplateComponentProps as B, validatePlateMapData as Bt, createFlowCytometryPanelTemplate as C, toInstrumentRunScheduleEvents as Ct, createTimeCourseTemplate as D, toFlowPanelRows as Dt, createProtocolStepsTemplate as E, toFlowPanelDataFrame as Et, getBioTemplateComponentProps as F, validateAssayMatrixData as Ft, toTemplateDataFrame as G, validateSampleSheetData as Gt, toBioTemplateComponentPropsById as H, validateQpcrPlateData as Ht, listBioTemplateComponentBindings as I, validateCalibrationCurveData as It, toDoseLayoutState as J, getBioTemplatePresetInfo as Jt, toWellMapArray as K, validateTimeCourseData as Kt, toBioTemplateComponentBindings as L, validateDoseResponseData as Lt, createPlateMapTemplate as M, toAssayMatrixDataFrame as Mt, bioTemplatePresetControlValuesToOptions as N, toAssayMatrixRows as Nt, createCalibrationCurveTemplate as O, toCalibrationCurveColumns as Ot, getBioTemplateComponentBindings as P, toAssayMatrixSampleOptions as Pt, toTimeCourseDataFrame as Q, getBioTemplatePackInfo as Qt, toBioTemplateComponentBindingsById as R, validateFlowCytometryPanelData as Rt, createInstrumentRunTemplate as S, toInstrumentRunRows as St, createAssayMatrixTemplate as T, toFlowPanelColumns as Tt, toBioTemplateComponentSnippets as U, validateReagentListData as Ut, toBioTemplateComponentPropsByComponent as V, validateProtocolStepsData as Vt, toBioTemplateComponentUsage as W, validateSamplePrepData as Wt, toWellPlateWells as X, searchBioTemplatePresets as Xt, toPlateMapEditorState as Y, listBioTemplatePresets as Yt, toTimeCourseColumns as Z, bioTemplatePacks as Zt, createElisaAssayCollection as _, toProtocolDataFrame as _t, getBioTemplateControlDefaults as a, TEMPLATE_COLLECTION_KEY as an, toSamplePrepColumns as at, createQpcrExpressionCollection as b, toInstrumentRunColumns as bt, listBioTemplatePresetControlSchemas as c, createTemplateEnvelope as cn, toReagentColumns as ct, createBioTemplatePresetCollectionFromControls as d, extractTemplateCollection as dn, toReagentRows as dt, searchBioTemplatePacks as en, toTimeCourseSteps as et, createWellPlateScreenCollection as f, getTemplateData as fn, toQpcrColumns as ft, createFlowCytometryAssayCollection as g, toProtocolColumns as gt, createWesternBlotAssayCollection as h, toQpcrWellPlateWells as ht, createBioTemplateControlToolkit as i, searchBioTemplateCatalog as in, toSampleRows as it, createSampleSheetTemplate as j, toAssayMatrixColumns as jt, createDoseResponseTemplate as k, toCalibrationCurveDataFrame as kt, requireBioTemplateControlSchema as l, ensureTemplateEnvelope as ln, toReagentDataFrame as lt, createDefaultBioTemplate as m, toQpcrRows as mt, bioTemplateControlsToSectionFormSchemas as n, getBioTemplateInfo as nn, toSampleDataFrame as nt, getBioTemplateControlSchema as o, assertTemplateEnvelope as on, toSamplePrepDataFrame as ot, createBioTemplatePackCollection as p, toQpcrDataFrame as pt, toDoseConditions as q, bioTemplatePresets as qt, bioTemplateControlsToSidebarPanels as r, listBioTemplateCatalog as rn, toSampleOptions as rt, listBioTemplateControlSchemas as s, createTemplateCollection as sn, toSamplePrepRows as st, bioTemplateControlsToFormSchema as t, bioTemplateCatalog as tn, toSampleColumns as tt, createBioTemplatePresetCollection as u, ensureTemplateFromCollection as un, toReagentListItems as ut, createTargetedMetabolomicsCollection as v, toProtocolRows as vt, createReagentListTemplate as w, toInstrumentRunSteps as wt, createQpcrPlateTemplate as x, toInstrumentRunDataFrame as xt, createLcmsBatchCollection as y, toProtocolSteps as yt, toBioTemplateComponentImports as z, validateInstrumentRunData as zt };
+export { toTimeCourseRows as $, listBioTemplatePacks as $t, createSamplePrepTemplate as A, toCalibrationCurveRows as At, toBioTemplateComponentProps as B, validatePlateMapData as Bt, createFlowCytometryPanelTemplate as C, SLOT_ORDER as Cn, toInstrumentRunScheduleEvents as Ct, createTimeCourseTemplate as D, toFlowPanelRows as Dt, createProtocolStepsTemplate as E, hslToHex as En, toFlowPanelDataFrame as Et, getBioTemplateComponentProps as F, validateAssayMatrixData as Ft, toTemplateDataFrame as G, validateSampleSheetData as Gt, toBioTemplateComponentPropsById as H, validateQpcrPlateData as Ht, listBioTemplateComponentBindings as I, validateCalibrationCurveData as It, toDoseLayoutState as J, getBioTemplatePresetInfo as Jt, toWellMapArray as K, validateTimeCourseData as Kt, toBioTemplateComponentBindings as L, validateDoseResponseData as Lt, createPlateMapTemplate as M, toAssayMatrixDataFrame as Mt, bioTemplatePresetControlValuesToOptions as N, toAssayMatrixRows as Nt, createCalibrationCurveTemplate as O, toCalibrationCurveColumns as Ot, getBioTemplateComponentBindings as P, toAssayMatrixSampleOptions as Pt, toTimeCourseDataFrame as Q, getBioTemplatePackInfo as Qt, toBioTemplateComponentBindingsById as R, validateFlowCytometryPanelData as Rt, createInstrumentRunTemplate as S, SLOT_COLORS as Sn, toInstrumentRunRows as St, createAssayMatrixTemplate as T, hexToHsl as Tn, toFlowPanelColumns as Tt, toBioTemplateComponentSnippets as U, validateReagentListData as Ut, toBioTemplateComponentPropsByComponent as V, validateProtocolStepsData as Vt, toBioTemplateComponentUsage as W, validateSamplePrepData as Wt, toWellPlateWells as X, searchBioTemplatePresets as Xt, toPlateMapEditorState as Y, listBioTemplatePresets as Yt, toTimeCourseColumns as Z, bioTemplatePacks as Zt, createElisaAssayCollection as _, createWellGrid as _n, toProtocolDataFrame as _t, getBioTemplateControlDefaults as a, TEMPLATE_COLLECTION_KEY as an, toSamplePrepColumns as at, createQpcrExpressionCollection as b, rowLabel as bn, toInstrumentRunColumns as bt, listBioTemplatePresetControlSchemas as c, createTemplateEnvelope as cn, toReagentColumns as ct, createBioTemplatePresetCollectionFromControls as d, extractTemplateCollection as dn, toReagentRows as dt, searchBioTemplatePacks as en, toTimeCourseSteps as et, createWellPlateScreenCollection as f, getTemplateData as fn, toQpcrColumns as ft, createFlowCytometryAssayCollection as g, createPlateRowLabels as gn, toProtocolColumns as gt, createWesternBlotAssayCollection as h, createPlateColumnLabels as hn, toQpcrWellPlateWells as ht, createBioTemplateControlToolkit as i, searchBioTemplateCatalog as in, toSampleRows as it, createSampleSheetTemplate as j, toAssayMatrixColumns as jt, createDoseResponseTemplate as k, toCalibrationCurveDataFrame as kt, requireBioTemplateControlSchema as l, ensureTemplateEnvelope as ln, toReagentDataFrame as lt, createDefaultBioTemplate as m, WELL_PLATE_SIZE_CONFIGS as mn, toQpcrRows as mt, bioTemplateControlsToSectionFormSchemas as n, getBioTemplateInfo as nn, toSampleDataFrame as nt, getBioTemplateControlSchema as o, assertTemplateEnvelope as on, toSamplePrepDataFrame as ot, createBioTemplatePackCollection as p, PLATE_CONFIGS as pn, toQpcrDataFrame as pt, toDoseConditions as q, bioTemplatePresets as qt, bioTemplateControlsToSidebarPanels as r, listBioTemplateCatalog as rn, toSampleOptions as rt, listBioTemplateControlSchemas as s, createTemplateCollection as sn, toSamplePrepRows as st, bioTemplateControlsToFormSchema as t, bioTemplateCatalog as tn, toSampleColumns as tt, createBioTemplatePresetCollection as u, ensureTemplateFromCollection as un, toReagentListItems as ut, createTargetedMetabolomicsCollection as v, getRectangleWellIds as vn, toProtocolRows as vt, createReagentListTemplate as w, deriveShade as wn, toInstrumentRunSteps as wt, createQpcrPlateTemplate as x, SAMPLE_COLOR_SCALE as xn, toInstrumentRunDataFrame as xt, createLcmsBatchCollection as y, rowIndex as yn, toProtocolSteps as yt, toBioTemplateComponentImports as z, validateInstrumentRunData as zt };
 
-//# sourceMappingURL=templates-DsP51i-S.js.map
+//# sourceMappingURL=templates-Qq113pyZ.js.map