@morscherlab/mint-sdk 1.1.25 → 1.2.0-beta.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (403) hide show
  1. package/README.md +44 -12
  2. package/dist/{ExperimentPopover-tLwJ7XF4.js → ExperimentPopover-oL0fg_A0.js} +6 -4
  3. package/dist/ExperimentPopover-oL0fg_A0.js.map +1 -0
  4. package/dist/{ExperimentSelectorModal-B6P2msT4.js → ExperimentSelectorModal-BeEOomw_.js} +5 -5
  5. package/dist/ExperimentSelectorModal-BeEOomw_.js.map +1 -0
  6. package/dist/{SettingsModal-BW3Ar-uy.js → SettingsModal-Dphh3RrI.js} +5 -8
  7. package/dist/SettingsModal-Dphh3RrI.js.map +1 -0
  8. package/dist/{EmptyState-p90quq8Z.js → Skeleton-DxtwJ5gt.js} +111 -93
  9. package/dist/Skeleton-DxtwJ5gt.js.map +1 -0
  10. package/dist/__tests__/components/ExperimentTimeline.test.d.ts +1 -0
  11. package/dist/__tests__/components/PluginWorkspaceView.internal.test.d.ts +1 -0
  12. package/dist/__tests__/components/SecretInput.test.d.ts +1 -0
  13. package/dist/__tests__/components/WellEditPopupInternal.test.d.ts +1 -0
  14. package/dist/__tests__/composables/useEventStream.test.d.ts +1 -0
  15. package/dist/__tests__/composables/useListReorder.test.d.ts +1 -0
  16. package/dist/__tests__/styles/cssTokens.test.d.ts +1 -0
  17. package/dist/components/ActionMenu.vue.d.ts +1 -1
  18. package/dist/components/AppAvatarMenu.vue.d.ts +4 -0
  19. package/dist/components/AppPluginSwitcher.vue.d.ts +2 -0
  20. package/dist/components/AppSidebar.vue.d.ts +1 -1
  21. package/dist/components/AuditTrail.vue.d.ts +13 -0
  22. package/dist/components/BatchProgressList.vue.d.ts +17 -0
  23. package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +1 -1
  24. package/dist/components/DataFrame.vue.d.ts +14 -2
  25. package/dist/components/DatePicker.vue.d.ts +1 -1
  26. package/dist/components/DateTimePicker.vue.d.ts +2 -0
  27. package/dist/components/DropdownButton.vue.d.ts +2 -0
  28. package/dist/components/ExperimentDataViewer.vue.d.ts +26 -1
  29. package/dist/components/ExperimentPopover.vue.d.ts +1 -0
  30. package/dist/components/ExperimentTimeline.vue.d.ts +29 -1
  31. package/dist/components/FitPanel.vue.d.ts +1 -1
  32. package/dist/components/LcmsSequenceTable.vue.d.ts +29 -1
  33. package/dist/components/PluginWorkspaceView.props.d.ts +29 -1
  34. package/dist/components/PluginWorkspaceView.vue.d.ts +5 -5
  35. package/dist/components/ProgressBar.vue.d.ts +1 -1
  36. package/dist/components/ProtocolStepEditor.vue.d.ts +1 -0
  37. package/dist/components/ReagentList.vue.d.ts +29 -1
  38. package/dist/components/SampleHierarchyTree.vue.d.ts +29 -1
  39. package/dist/components/SampleSelector.drag.d.ts +13 -0
  40. package/dist/components/SampleSelector.tree.d.ts +2 -0
  41. package/dist/components/SampleSelector.vue.d.ts +34 -1
  42. package/dist/components/ScheduleCalendar.vue.d.ts +20 -0
  43. package/dist/components/SecretInput.vue.d.ts +28 -0
  44. package/dist/components/SmartGroupFieldRecipe.vue.d.ts +2 -1
  45. package/dist/components/TimePicker.vue.d.ts +1 -0
  46. package/dist/components/WellPlate.geometry.d.ts +15 -0
  47. package/dist/components/WellPlate.interaction.d.ts +13 -0
  48. package/dist/components/WellPlate.vue.d.ts +29 -0
  49. package/dist/components/index.d.ts +9 -0
  50. package/dist/components/index.js +8 -8
  51. package/dist/components/internal/AppTopBarPageSelectorInternal.vue.d.ts +2 -0
  52. package/dist/components/internal/DataStateInternal.vue.d.ts +43 -0
  53. package/dist/components/internal/WellEditPopupInternal.vue.d.ts +3 -1
  54. package/dist/components/internal/WorkspaceControlsInternal.vue.d.ts +23 -0
  55. package/dist/components/internal/WorkspaceShellInternal.vue.d.ts +70 -0
  56. package/dist/components/internal/WorkspaceSidebarInternal.vue.d.ts +43 -0
  57. package/dist/{components-DQt0tcpY.js → components-CgAUzF8F.js} +2491 -2235
  58. package/dist/components-CgAUzF8F.js.map +1 -0
  59. package/dist/composables/controlSchemaTypes.d.ts +34 -0
  60. package/dist/composables/flattenWorkspaceBindings.d.ts +61 -0
  61. package/dist/composables/index.d.ts +8 -2
  62. package/dist/composables/index.js +10 -10
  63. package/dist/composables/pluginWorkspaceModel.d.ts +164 -0
  64. package/dist/composables/useAsync.d.ts +5 -1
  65. package/dist/composables/useBioTemplateWorkspace.d.ts +4 -20
  66. package/dist/composables/useCommandHistory.d.ts +5 -1
  67. package/dist/composables/useDropdownState.d.ts +18 -2
  68. package/dist/composables/useEventStream.d.ts +52 -0
  69. package/dist/composables/useFocusTrap.d.ts +21 -0
  70. package/dist/composables/useJobsStatusTray.d.ts +1 -1
  71. package/dist/composables/useListReorder.d.ts +90 -0
  72. package/dist/composables/useMenuKeyboard.d.ts +29 -0
  73. package/dist/composables/useOptimisticMutation.d.ts +5 -1
  74. package/dist/composables/usePluginClient.d.ts +4 -17
  75. package/dist/composables/usePluginConfig.d.ts +3 -1
  76. package/dist/composables/usePluginWorkspace.d.ts +51 -0
  77. package/dist/composables/useRequestSyncState.d.ts +42 -2
  78. package/dist/composables/useResourceCrud.d.ts +5 -1
  79. package/dist/composables/useRovingFocus.d.ts +24 -0
  80. package/dist/composables/useScheduleDrag.d.ts +1 -0
  81. package/dist/composables/useWellPainting.d.ts +5 -1
  82. package/dist/composables/useWellPlateAdapter.d.ts +5 -1
  83. package/dist/composables/useWellPlateValidation.d.ts +5 -1
  84. package/dist/composables/workspaceRecipes.d.ts +188 -0
  85. package/dist/{composables-CkXDe7nm.js → composables-B_pia3hO.js} +105 -254
  86. package/dist/composables-B_pia3hO.js.map +1 -0
  87. package/dist/{useApi-CDBq6z23.js → errors-_W0-LbA6.js} +102 -3
  88. package/dist/errors-_W0-LbA6.js.map +1 -0
  89. package/dist/{experiment-Y9Iz7KYi.js → experiment-Cwl9AYxw.js} +3 -8
  90. package/dist/experiment-Cwl9AYxw.js.map +1 -0
  91. package/dist/{experiment-utils-CLnzPPq5.js → experiment-utils-DV3DrvE_.js} +70 -51
  92. package/dist/experiment-utils-DV3DrvE_.js.map +1 -0
  93. package/dist/index.d.ts +1 -0
  94. package/dist/index.js +15 -15
  95. package/dist/install.js +2 -7
  96. package/dist/install.js.map +1 -1
  97. package/dist/permissions.d.ts +42 -1
  98. package/dist/permissions.js +20 -10
  99. package/dist/permissions.js.map +1 -1
  100. package/dist/stores/index.d.ts +1 -1
  101. package/dist/stores/index.js +3 -3
  102. package/dist/stores/settings.d.ts +31 -1
  103. package/dist/styles.css +11247 -29501
  104. package/dist/templates/builderReadUtils.d.ts +1 -1
  105. package/dist/templates/index.js +2 -4
  106. package/dist/{templates-CovvRZ-9.js → templates-Qq113pyZ.js} +303 -106
  107. package/dist/templates-Qq113pyZ.js.map +1 -0
  108. package/dist/types/form-builder.d.ts +1 -1
  109. package/dist/{useControlSchema-BhoJzWzx.js → useControlSchema-aMZlb4Sc.js} +684 -1216
  110. package/dist/useControlSchema-aMZlb4Sc.js.map +1 -0
  111. package/dist/{useDropdownState-DSb3BC3N.js → useDropdownState-DitCtrTT.js} +22 -6
  112. package/dist/useDropdownState-DitCtrTT.js.map +1 -0
  113. package/dist/{useExperimentSelector-D0pjj9WH.js → useExperimentSelector-I8HC8hUu.js} +4 -4
  114. package/dist/{useExperimentSelector-D0pjj9WH.js.map → useExperimentSelector-I8HC8hUu.js.map} +1 -1
  115. package/dist/{useFormBuilder-DiEcDis2.js → useFormBuilder-TCxNnqeb.js} +2 -2
  116. package/dist/{useFormBuilder-DiEcDis2.js.map → useFormBuilder-TCxNnqeb.js.map} +1 -1
  117. package/dist/{useProtocolTemplates-DHwSveE6.js → useProtocolTemplates-BmX_iVBR.js} +660 -197
  118. package/dist/useProtocolTemplates-BmX_iVBR.js.map +1 -0
  119. package/dist/utils/color.d.ts +13 -0
  120. package/dist/utils/errors.d.ts +9 -0
  121. package/dist/utils/pluginSecrets.d.ts +53 -0
  122. package/dist/utils/records.d.ts +4 -0
  123. package/package.json +1 -1
  124. package/src/__tests__/components/ActionMenu.test.ts +94 -0
  125. package/src/__tests__/components/AppAvatarMenu.test.ts +123 -0
  126. package/src/__tests__/components/BaseTabs.test.ts +67 -0
  127. package/src/__tests__/components/DataFrame.test.ts +183 -11
  128. package/src/__tests__/components/DataStates.test.ts +176 -0
  129. package/src/__tests__/components/DatePicker.test.ts +76 -0
  130. package/src/__tests__/components/DateTimePicker.test.ts +36 -0
  131. package/src/__tests__/components/DropdownButton.test.ts +134 -0
  132. package/src/__tests__/components/ExperimentTimeline.test.ts +63 -0
  133. package/src/__tests__/components/GeneratedPluginView.test.ts +0 -5
  134. package/src/__tests__/components/GroupAssigner.test.ts +53 -0
  135. package/src/__tests__/components/JobsStatusTray.test.ts +20 -18
  136. package/src/__tests__/components/LcmsSequenceTable.test.ts +22 -0
  137. package/src/__tests__/components/PluginWorkspaceView.internal.test.ts +230 -0
  138. package/src/__tests__/components/RackEditor.test.ts +35 -0
  139. package/src/__tests__/components/ReagentList.test.ts +64 -2
  140. package/src/__tests__/components/RetiredStyles.test.ts +31 -0
  141. package/src/__tests__/components/SampleSelector.drag.test.ts +51 -1
  142. package/src/__tests__/components/ScheduleCalendar.test.ts +63 -0
  143. package/src/__tests__/components/SecretInput.test.ts +87 -0
  144. package/src/__tests__/components/SegmentedControl.test.ts +88 -0
  145. package/src/__tests__/components/TimePicker.test.ts +61 -0
  146. package/src/__tests__/components/WellEditPopupInternal.test.ts +108 -0
  147. package/src/__tests__/components/WellPlate.interaction.test.ts +59 -0
  148. package/src/__tests__/composables/useAuth.test.ts +25 -0
  149. package/src/__tests__/composables/useDropdownState.test.ts +58 -1
  150. package/src/__tests__/composables/useEventStream.test.ts +140 -0
  151. package/src/__tests__/composables/useGeneratedAnalysis.test.ts +103 -0
  152. package/src/__tests__/composables/useJobsStatusTray.test.ts +25 -161
  153. package/src/__tests__/composables/useListReorder.test.ts +145 -0
  154. package/src/__tests__/composables/usePluginClient.test.ts +148 -13
  155. package/src/__tests__/composables/useRequestSyncState.test.ts +140 -0
  156. package/src/__tests__/docs/frontendDocsCatalog.test.ts +55 -2
  157. package/src/__tests__/stores/settings.test.ts +71 -1
  158. package/src/__tests__/styles/cssTokens.test.ts +131 -0
  159. package/src/__tests__/utils/permissions.test.ts +68 -0
  160. package/src/components/ActionMenu.vue +45 -88
  161. package/src/components/AlertBox.vue +0 -4
  162. package/src/components/AppAvatarMenu.vue +26 -7
  163. package/src/components/AppLayout.vue +0 -4
  164. package/src/components/AppPluginSwitcher.story.vue +87 -0
  165. package/src/components/AppPluginSwitcher.vue +2 -5
  166. package/src/components/AppSidebar.vue +0 -4
  167. package/src/components/AppToastContainer.vue +6 -8
  168. package/src/components/AppTopBar.vue +0 -4
  169. package/src/components/ArtifactSaveDialog.vue +0 -4
  170. package/src/components/ArtifactSelectorModal.vue +0 -4
  171. package/src/components/AuditTrail.story.vue +18 -0
  172. package/src/components/AuditTrail.vue +27 -7
  173. package/src/components/AutoGroupModal.vue +0 -4
  174. package/src/components/Avatar.vue +0 -4
  175. package/src/components/BaseButton.vue +0 -4
  176. package/src/components/BaseCheckbox.vue +0 -4
  177. package/src/components/BaseInput.vue +0 -4
  178. package/src/components/BaseModal.vue +8 -60
  179. package/src/components/BasePill.vue +0 -4
  180. package/src/components/BaseRadioGroup.vue +0 -4
  181. package/src/components/BaseSelect.vue +0 -4
  182. package/src/components/BaseSlider.vue +0 -4
  183. package/src/components/BaseTabs.vue +26 -5
  184. package/src/components/BaseTextarea.vue +0 -4
  185. package/src/components/BaseToggle.vue +0 -4
  186. package/src/components/BatchProgressList.story.vue +18 -0
  187. package/src/components/BatchProgressList.vue +32 -4
  188. package/src/components/BioTemplateExperimentWorkspaceView.vue +10 -21
  189. package/src/components/BioTemplatePackWorkspaceView.vue +11 -15
  190. package/src/components/BioTemplatePresetWorkspaceView.vue +8 -13
  191. package/src/components/Breadcrumb.vue +0 -4
  192. package/src/components/Calendar.vue +0 -4
  193. package/src/components/ChartContainer.story.vue +1 -1
  194. package/src/components/ChartContainer.vue +0 -4
  195. package/src/components/ChemicalFormula.vue +0 -4
  196. package/src/components/CollapsibleCard.vue +0 -4
  197. package/src/components/ColorSlider.vue +0 -4
  198. package/src/components/ComponentBindingRenderer.vue +1 -3
  199. package/src/components/ConcentrationInput.vue +0 -4
  200. package/src/components/ConfirmDialog.vue +0 -4
  201. package/src/components/ControlWorkspaceView.vue +11 -22
  202. package/src/components/DataFrame.story.vue +14 -0
  203. package/src/components/DataFrame.vue +97 -23
  204. package/src/components/DatePicker.vue +73 -27
  205. package/src/components/DateTimePicker.vue +45 -17
  206. package/src/components/Divider.vue +0 -4
  207. package/src/components/DoseCalculator.vue +0 -4
  208. package/src/components/DoseDesignWorkspaceView.vue +6 -25
  209. package/src/components/DropdownButton.vue +24 -6
  210. package/src/components/EmptyState.vue +0 -4
  211. package/src/components/ExperimentCodeBadge.vue +0 -4
  212. package/src/components/ExperimentDataViewer.story.vue +3 -0
  213. package/src/components/ExperimentDataViewer.vue +33 -13
  214. package/src/components/ExperimentPopover.vue +2 -5
  215. package/src/components/ExperimentSelectorModal.vue +0 -4
  216. package/src/components/ExperimentTimeline.story.vue +18 -0
  217. package/src/components/ExperimentTimeline.vue +81 -75
  218. package/src/components/FileUploader.vue +0 -4
  219. package/src/components/FitPanel.vue +0 -4
  220. package/src/components/FormActions.story.vue +96 -0
  221. package/src/components/FormActions.vue +0 -4
  222. package/src/components/FormBuilder.vue +0 -4
  223. package/src/components/FormField.vue +0 -4
  224. package/src/components/FormulaInput.vue +0 -4
  225. package/src/components/GeneratedPathInput.story.vue +68 -0
  226. package/src/components/GeneratedPlotlyResult.story.vue +96 -0
  227. package/src/components/GeneratedPlotlyResult.vue +3 -3
  228. package/src/components/GeneratedPluginView.story.vue +145 -0
  229. package/src/components/GeneratedPluginView.vue +10 -10
  230. package/src/components/GeneratedResultRenderer.story.vue +117 -0
  231. package/src/components/GeneratedResultRenderer.vue +4 -4
  232. package/src/components/GroupAssigner.vue +67 -5
  233. package/src/components/IconButton.vue +0 -4
  234. package/src/components/InstrumentAlertLog.vue +0 -4
  235. package/src/components/InstrumentStateBadge.vue +0 -4
  236. package/src/components/InstrumentStatusCard.vue +0 -4
  237. package/src/components/JobsStatusTray.story.vue +6 -10
  238. package/src/components/JobsStatusTray.vue +0 -4
  239. package/src/components/LcmsSequenceTable.vue +81 -50
  240. package/src/components/LoadingSpinner.vue +0 -4
  241. package/src/components/MobileSupportGate.vue +0 -4
  242. package/src/components/MoleculeInput.vue +0 -4
  243. package/src/components/MultiSelect.vue +0 -4
  244. package/src/components/NumberInput.vue +0 -4
  245. package/src/components/PlateMapEditor.vue +3 -14
  246. package/src/components/PluginIcon.vue +0 -4
  247. package/src/components/PluginWorkspaceView.props.ts +38 -0
  248. package/src/components/PluginWorkspaceView.vue +53 -224
  249. package/src/components/ProgressBar.vue +0 -4
  250. package/src/components/ProtocolStepEditor.vue +2 -4
  251. package/src/components/RackEditor.vue +51 -70
  252. package/src/components/ReagentEditor.vue +0 -4
  253. package/src/components/ReagentList.story.vue +18 -0
  254. package/src/components/ReagentList.vue +127 -82
  255. package/src/components/ResourceCard.vue +0 -4
  256. package/src/components/RuntimeUpdateNotice.story.vue +49 -0
  257. package/src/components/RuntimeUpdateNotice.vue +4 -4
  258. package/src/components/SampleHierarchyTree.story.vue +18 -0
  259. package/src/components/SampleHierarchyTree.vue +32 -9
  260. package/src/components/SampleLegend.vue +2 -8
  261. package/src/components/SampleSelector.drag.ts +51 -0
  262. package/src/components/SampleSelector.story.vue +6 -0
  263. package/src/components/SampleSelector.tree.ts +2 -0
  264. package/src/components/SampleSelector.vue +49 -10
  265. package/src/components/SampleSelectorGroupNode.vue +19 -0
  266. package/src/components/ScheduleCalendar.story.vue +6 -0
  267. package/src/components/ScheduleCalendar.vue +82 -7
  268. package/src/components/ScientificNumber.vue +0 -4
  269. package/src/components/SecretInput.story.vue +79 -0
  270. package/src/components/SecretInput.vue +150 -0
  271. package/src/components/SectionCard.vue +0 -4
  272. package/src/components/SegmentedControl.vue +48 -5
  273. package/src/components/SequenceInput.vue +0 -4
  274. package/src/components/SequenceProgressBar.story.vue +110 -0
  275. package/src/components/SequenceProgressBar.vue +0 -4
  276. package/src/components/SettingsModal.vue +0 -4
  277. package/src/components/Skeleton.vue +0 -4
  278. package/src/components/SmartGroupFieldRecipe.vue +8 -6
  279. package/src/components/SmartGroupManual.vue +0 -4
  280. package/src/components/StatusIndicator.vue +0 -4
  281. package/src/components/StepWizard.vue +0 -4
  282. package/src/components/TagsInput.vue +4 -6
  283. package/src/components/ThemeToggle.vue +0 -4
  284. package/src/components/TimePicker.vue +36 -7
  285. package/src/components/TimeRangeInput.vue +0 -4
  286. package/src/components/Tooltip.story.vue +3 -3
  287. package/src/components/Tooltip.vue +0 -4
  288. package/src/components/UnitInput.vue +0 -4
  289. package/src/components/WellPlate.geometry.ts +60 -1
  290. package/src/components/WellPlate.interaction.ts +44 -0
  291. package/src/components/WellPlate.story.vue +8 -0
  292. package/src/components/WellPlate.vue +53 -7
  293. package/src/components/index.ts +9 -0
  294. package/src/components/internal/AppTopBarPageSelectorInternal.vue +2 -5
  295. package/src/components/internal/AppTopBarPillNavInternal.vue +0 -4
  296. package/src/components/internal/DataStateInternal.vue +74 -0
  297. package/src/components/internal/FormSectionRenderer.vue +0 -4
  298. package/src/components/internal/WellEditPopupInternal.vue +20 -5
  299. package/src/components/internal/WorkspaceControlsInternal.vue +20 -0
  300. package/src/components/internal/WorkspaceShellInternal.vue +125 -0
  301. package/src/components/internal/WorkspaceSidebarInternal.vue +82 -0
  302. package/src/composables/controlSchemaTypes.ts +34 -0
  303. package/src/composables/experimentDesignData.ts +1 -3
  304. package/src/composables/flattenWorkspaceBindings.ts +104 -0
  305. package/src/composables/formBuilderRegistry.ts +5 -0
  306. package/src/composables/index.ts +41 -5
  307. package/src/composables/pluginWorkspaceModel.ts +182 -0
  308. package/src/composables/useAsync.ts +5 -1
  309. package/src/composables/useBioTemplatePackWorkspace.ts +15 -9
  310. package/src/composables/useBioTemplatePresetWorkspace.ts +14 -15
  311. package/src/composables/useBioTemplateWorkspace.ts +18 -43
  312. package/src/composables/useCommandHistory.ts +5 -1
  313. package/src/composables/useDropdownState.ts +35 -5
  314. package/src/composables/useEventStream.ts +326 -0
  315. package/src/composables/useFileImport.ts +2 -7
  316. package/src/composables/useFocusTrap.ts +91 -0
  317. package/src/composables/useGeneratedAnalysis.ts +46 -103
  318. package/src/composables/useJobsStatusTray.ts +1 -1
  319. package/src/composables/useListReorder.story.vue +143 -0
  320. package/src/composables/useListReorder.ts +242 -0
  321. package/src/composables/useMenuKeyboard.ts +90 -0
  322. package/src/composables/useOptimisticMutation.ts +6 -16
  323. package/src/composables/usePluginClient.ts +91 -252
  324. package/src/composables/usePluginConfig.ts +3 -1
  325. package/src/composables/usePluginWorkspace.ts +208 -0
  326. package/src/composables/useRackEditor.ts +2 -11
  327. package/src/composables/useRequestSyncState.ts +98 -28
  328. package/src/composables/useResourceCrud.ts +6 -16
  329. package/src/composables/useRovingFocus.ts +66 -0
  330. package/src/composables/useScheduleDrag.ts +37 -0
  331. package/src/composables/useWellPainting.ts +10 -30
  332. package/src/composables/useWellPlateAdapter.ts +5 -1
  333. package/src/composables/useWellPlateEditor.ts +1 -11
  334. package/src/composables/useWellPlateValidation.ts +5 -1
  335. package/src/composables/workspaceRecipes.ts +267 -0
  336. package/src/index.ts +16 -0
  337. package/src/permissions.ts +48 -9
  338. package/src/stores/experiment.ts +2 -7
  339. package/src/stores/index.ts +9 -1
  340. package/src/stores/settings.ts +93 -1
  341. package/src/styles/components/audit-trail.css +5 -5
  342. package/src/styles/components/batch-progress-list.css +7 -0
  343. package/src/styles/components/color-slider.css +2 -2
  344. package/src/styles/components/data-state.css +30 -0
  345. package/src/styles/components/dataframe.css +29 -35
  346. package/src/styles/components/experiment-data-viewer.css +4 -4
  347. package/src/styles/components/experiment-timeline.css +3 -30
  348. package/src/styles/components/form-builder.css +5 -5
  349. package/src/styles/components/lcms-sequence-table.css +16 -1
  350. package/src/styles/components/multi-select.css +1 -1
  351. package/src/styles/components/reagent-list.css +38 -31
  352. package/src/styles/components/sample-hierarchy-tree.css +5 -19
  353. package/src/styles/components/sample-selector.css +9 -2
  354. package/src/styles/components/schedule-calendar.css +8 -0
  355. package/src/styles/components/scientific-number.css +1 -1
  356. package/src/styles/components/secret-input.css +60 -0
  357. package/src/styles/components/well-plate.css +8 -0
  358. package/src/styles/index.css +9 -0
  359. package/src/styles/variables.css +29 -0
  360. package/src/templates/builderPresetControls.ts +1 -1
  361. package/src/templates/builderReadUtils.ts +1 -3
  362. package/src/templates/componentPlateHelpers.ts +3 -1
  363. package/src/templates/componentTargetResolvers.ts +1 -3
  364. package/src/templates/controlSchemaTargets.ts +1 -3
  365. package/src/templates/doseResponseAdapters.ts +2 -13
  366. package/src/templates/elisaAssayCollectionBuilder.ts +2 -2
  367. package/src/templates/plateMapBuilder.ts +2 -2
  368. package/src/templates/qpcrPlateBuilder.ts +1 -1
  369. package/src/templates/templateValidators.ts +1 -1
  370. package/src/templates/timeCourseBuilder.ts +2 -2
  371. package/src/templates/wellPlateScreenCollectionBuilder.ts +2 -2
  372. package/src/types/form-builder.ts +1 -0
  373. package/src/utils/color.ts +51 -0
  374. package/src/utils/errors.ts +29 -0
  375. package/src/utils/formModelSync.ts +1 -3
  376. package/src/utils/pluginIcon.ts +1 -3
  377. package/src/utils/pluginSecrets.ts +102 -0
  378. package/src/utils/records.ts +9 -0
  379. package/dist/EmptyState-p90quq8Z.js.map +0 -1
  380. package/dist/ExperimentPopover-tLwJ7XF4.js.map +0 -1
  381. package/dist/ExperimentSelectorModal-B6P2msT4.js.map +0 -1
  382. package/dist/SettingsModal-BW3Ar-uy.js.map +0 -1
  383. package/dist/components-DQt0tcpY.js.map +0 -1
  384. package/dist/composables/autoGroupConstants.d.ts +0 -1
  385. package/dist/composables/autoGroupGrouping.d.ts +0 -3
  386. package/dist/composables/useAutoGroupInputSources.d.ts +0 -32
  387. package/dist/composables-CkXDe7nm.js.map +0 -1
  388. package/dist/experiment-Y9Iz7KYi.js.map +0 -1
  389. package/dist/experiment-utils-CLnzPPq5.js.map +0 -1
  390. package/dist/templates/builderDefaults.d.ts +0 -1
  391. package/dist/templates/plateGeometry.d.ts +0 -4
  392. package/dist/templates-CovvRZ-9.js.map +0 -1
  393. package/dist/useApi-CDBq6z23.js.map +0 -1
  394. package/dist/useControlSchema-BhoJzWzx.js.map +0 -1
  395. package/dist/useDropdownState-DSb3BC3N.js.map +0 -1
  396. package/dist/useProtocolTemplates-DHwSveE6.js.map +0 -1
  397. package/src/__tests__/composables/useAutoGroupInputSources.test.ts +0 -127
  398. package/src/composables/autoGroupConstants.ts +0 -4
  399. package/src/composables/autoGroupGrouping.ts +0 -148
  400. package/src/composables/useAutoGroupInputSources.ts +0 -147
  401. package/src/templates/builderDefaults.ts +0 -11
  402. package/src/templates/plateGeometry.ts +0 -62
  403. /package/dist/__tests__/{composables/useAutoGroupInputSources.test.d.ts → components/DataStates.test.d.ts} +0 -0
@@ -401,7 +401,3 @@ async function clearFinished(): Promise<void> {
401
401
  </div>
402
402
  </Teleport>
403
403
  </template>
404
-
405
- <style>
406
- @import '../styles/components/jobs-status-tray.css';
407
- </style>
@@ -1,12 +1,14 @@
1
1
  <script setup lang="ts">
2
2
  /** Table for Xcalibur-compatible LCMS sequence rows with optional reorder/remove/duplicate controls. */
3
- import { computed, ref } from 'vue'
3
+ import { computed, type ComponentPublicInstance } from 'vue'
4
+ import { useListReorder } from '../composables/useListReorder'
4
5
  import {
5
6
  basenameFromWindowsPath,
6
7
  DEFAULT_LCMS_SEQUENCE_COLUMNS,
7
8
  type LcmsSequenceItem,
8
9
  type LcmsSequenceTableColumn,
9
10
  } from '../lcms'
11
+ import DataStateInternal from './internal/DataStateInternal.vue'
10
12
 
11
13
  interface Props {
12
14
  items?: LcmsSequenceItem[]
@@ -15,6 +17,13 @@ interface Props {
15
17
  maxRows?: number
16
18
  showMoreLabel?: boolean
17
19
  emptyMessage?: string
20
+ /** Replace the table with a loading placeholder. */
21
+ loading?: boolean
22
+ /**
23
+ * Error message. When set, the table is replaced by an error state.
24
+ * `null`/`undefined` renders normally.
25
+ */
26
+ error?: string | null
18
27
  }
19
28
 
20
29
  const props = withDefaults(defineProps<Props>(), {
@@ -24,6 +33,8 @@ const props = withDefaults(defineProps<Props>(), {
24
33
  maxRows: undefined,
25
34
  showMoreLabel: true,
26
35
  emptyMessage: 'No sequence items to display',
36
+ loading: false,
37
+ error: null,
27
38
  })
28
39
 
29
40
  const emit = defineEmits<{
@@ -32,8 +43,38 @@ const emit = defineEmits<{
32
43
  duplicate: [index: number]
33
44
  }>()
34
45
 
35
- const dragIndex = ref<number | null>(null)
36
- const dropTargetIndex = ref<number | null>(null)
46
+ // Rows are a plain ordered list: pointer drag plus an Alt+Arrow keyboard
47
+ // alternative, both from the shared reorder composable.
48
+ const handleRefs = new Map<string, HTMLElement>()
49
+
50
+ const {
51
+ draggingId,
52
+ dragOverId,
53
+ announcement: reorderAnnouncement,
54
+ announcerStyle,
55
+ onDragStart,
56
+ onDragOver,
57
+ onDragLeave,
58
+ onDrop,
59
+ onDragEnd,
60
+ onKeydown: onReorderKeydown,
61
+ } = useListReorder<LcmsSequenceItem>({
62
+ items: () => props.items,
63
+ getId: (_item, index) => String(index),
64
+ getLabel: (item) => item.file_name,
65
+ disabled: () => !props.editable,
66
+ getElement: (id) => handleRefs.get(id),
67
+ itemNoun: 'Row',
68
+ onReorder: ({ fromIndex, toIndex }) => emit('reorder', fromIndex, toIndex),
69
+ })
70
+
71
+ function setHandleRef(index: number, el: Element | ComponentPublicInstance | null) {
72
+ if (el instanceof HTMLElement) {
73
+ handleRefs.set(String(index), el)
74
+ } else {
75
+ handleRefs.delete(String(index))
76
+ }
77
+ }
37
78
 
38
79
  const displayItems = computed(() => {
39
80
  if (!props.maxRows) return props.items
@@ -60,42 +101,11 @@ function cellValue(item: LcmsSequenceItem, column: LcmsSequenceTableColumn, inde
60
101
  return item[column.key] ?? ''
61
102
  }
62
103
 
63
- function onDragStart(event: DragEvent, index: number) {
64
- if (!props.editable) return
65
- dragIndex.value = index
66
- if (event.dataTransfer) {
67
- event.dataTransfer.effectAllowed = 'move'
68
- event.dataTransfer.setData('text/plain', String(index))
69
- }
70
- }
71
-
72
- function onDragOver(event: DragEvent, index: number) {
73
- if (!props.editable) return
74
- event.preventDefault()
75
- if (event.dataTransfer) event.dataTransfer.dropEffect = 'move'
76
- if (dragIndex.value !== null && dragIndex.value !== index) {
77
- dropTargetIndex.value = index
78
- }
79
- }
80
-
81
- function clearDragState() {
82
- dragIndex.value = null
83
- dropTargetIndex.value = null
84
- }
85
-
86
- function onDrop(event: DragEvent, toIndex: number) {
87
- if (!props.editable) return
88
- event.preventDefault()
89
- if (dragIndex.value !== null && dragIndex.value !== toIndex) {
90
- emit('reorder', dragIndex.value, toIndex)
91
- }
92
- clearDragState()
93
- }
94
104
  </script>
95
105
 
96
106
  <template>
97
107
  <div class="mint-lcms-sequence-table">
98
- <div class="mint-lcms-sequence-table__scroller">
108
+ <div v-if="!loading && !error && items.length > 0" class="mint-lcms-sequence-table__scroller">
99
109
  <table class="mint-lcms-sequence-table__table">
100
110
  <thead>
101
111
  <tr>
@@ -120,19 +130,27 @@ function onDrop(event: DragEvent, toIndex: number) {
120
130
  :draggable="editable"
121
131
  class="mint-lcms-sequence-table__row"
122
132
  :class="{
123
- 'mint-lcms-sequence-table__row--dragging': dragIndex === index,
124
- 'mint-lcms-sequence-table__row--drop-above': dropTargetIndex === index && dragIndex !== null && dragIndex > index,
125
- 'mint-lcms-sequence-table__row--drop-below': dropTargetIndex === index && dragIndex !== null && dragIndex < index,
133
+ 'mint-lcms-sequence-table__row--dragging': draggingId === String(index),
134
+ 'mint-lcms-sequence-table__row--drop-above': dragOverId === String(index) && draggingId !== null && Number(draggingId) > index,
135
+ 'mint-lcms-sequence-table__row--drop-below': dragOverId === String(index) && draggingId !== null && Number(draggingId) < index,
126
136
  }"
127
- @dragstart="onDragStart($event, index)"
137
+ @dragstart="onDragStart($event, item, index)"
128
138
  @dragenter.prevent
129
- @dragover="onDragOver($event, index)"
130
- @dragleave="dropTargetIndex = null"
131
- @drop="onDrop($event, index)"
132
- @dragend="clearDragState"
139
+ @dragover="onDragOver($event, item, index)"
140
+ @dragleave="onDragLeave"
141
+ @drop="onDrop($event, item, index)"
142
+ @dragend="onDragEnd"
133
143
  >
134
144
  <td v-if="editable" class="mint-lcms-sequence-table__drag-cell">
135
- <span class="mint-lcms-sequence-table__drag-handle" aria-hidden="true">::</span>
145
+ <button
146
+ :ref="(el) => setHandleRef(index, el)"
147
+ type="button"
148
+ class="mint-lcms-sequence-table__drag-handle"
149
+ :aria-label="`Reorder ${item.file_name}. Press Alt with the arrow keys to move it.`"
150
+ @keydown="onReorderKeydown($event, item, index)"
151
+ >
152
+ ::
153
+ </button>
136
154
  </td>
137
155
  <td
138
156
  v-for="column in columns"
@@ -176,16 +194,29 @@ function onDrop(event: DragEvent, toIndex: number) {
176
194
  </table>
177
195
  </div>
178
196
 
179
- <div v-if="items.length === 0" class="mint-lcms-sequence-table__empty">
180
- {{ emptyMessage }}
197
+ <div v-else-if="error" class="mint-lcms-sequence-table__state">
198
+ <slot name="error" :error="error">
199
+ <DataStateInternal state="error" size="sm" :title="error" />
200
+ </slot>
201
+ </div>
202
+
203
+ <div v-else-if="loading" class="mint-lcms-sequence-table__state">
204
+ <slot name="loading">
205
+ <DataStateInternal state="loading" size="sm" loading-label="Loading sequence" />
206
+ </slot>
207
+ </div>
208
+
209
+ <div v-else class="mint-lcms-sequence-table__state">
210
+ <slot name="empty">
211
+ <DataStateInternal state="empty" size="sm" :title="emptyMessage" />
212
+ </slot>
181
213
  </div>
182
214
 
183
215
  <div v-if="hasMore && showMoreLabel" class="mint-lcms-sequence-table__more">
184
216
  Showing first {{ maxRows }} of {{ items.length }} items
185
217
  </div>
218
+
219
+ <!-- Reorder announcements for screen readers -->
220
+ <div role="status" aria-live="polite" :style="announcerStyle">{{ reorderAnnouncement }}</div>
186
221
  </div>
187
222
  </template>
188
-
189
- <style>
190
- @import '../styles/components/lcms-sequence-table.css';
191
- </style>
@@ -44,7 +44,3 @@ withDefaults(defineProps<Props>(), {
44
44
  <span class="mint-spinner__label">{{ label }}</span>
45
45
  </div>
46
46
  </template>
47
-
48
- <style>
49
- @import '../styles/components/loading-spinner.css';
50
- </style>
@@ -109,7 +109,3 @@ const {
109
109
  :is-supported="isSupported"
110
110
  />
111
111
  </template>
112
-
113
- <style>
114
- @import '../styles/components/mobile-support-gate.css';
115
- </style>
@@ -420,7 +420,3 @@ onUnmounted(() => {
420
420
  </div>
421
421
  </div>
422
422
  </template>
423
-
424
- <style>
425
- @import '../styles/components/molecule-input.css';
426
- </style>
@@ -117,7 +117,3 @@ const selectedLabels = computed(() => {
117
117
  </div>
118
118
  </div>
119
119
  </template>
120
-
121
- <style>
122
- @import '../styles/components/multi-select.css';
123
- </style>
@@ -156,7 +156,3 @@ function increment() {
156
156
  />
157
157
  </div>
158
158
  </template>
159
-
160
- <style>
161
- @import '../styles/components/number-input.css';
162
- </style>
@@ -1,22 +1,15 @@
1
1
  <script setup lang="ts">
2
2
  /** Full plate-map design environment for 96/384-well plates with sample assignment, slot-color coding, undo/redo, and CSV/JSON import-export. */
3
3
  import { ref, computed, watch } from 'vue'
4
- import type { PlateMapEditorState, WellPlateFormat, SampleType, Well, PlateMap } from '../types'
4
+ import type { PlateMapEditorState, WellPlateFormat, SampleType, Well, PlateMap, SlotPosition } from '../types'
5
+ // Slot colors matching MSExpDesigner — shared with RackEditor.
6
+ import { SLOT_COLORS, SLOT_ORDER } from '../utils/color'
5
7
  import { useWellPlateEditor } from '../composables/useWellPlateEditor'
6
8
  import { useEventListener } from '../composables/useEventListener'
7
9
  import WellPlate from './WellPlate.vue'
8
10
  import SampleLegend from './SampleLegend.vue'
9
11
  import PlateMapEditorToolbarInternal from './internal/PlateMapEditorToolbarInternal.vue'
10
12
 
11
- // Slot colors matching MSExpDesigner
12
- type SlotPosition = 'R' | 'G' | 'B' | 'Y'
13
- const SLOT_COLORS: Record<SlotPosition, string> = {
14
- R: '#ef4444', // red
15
- G: '#22c55e', // green
16
- B: '#3b82f6', // blue
17
- Y: '#eab308', // yellow
18
- }
19
- const SLOT_ORDER: SlotPosition[] = ['R', 'G', 'B', 'Y']
20
13
 
21
14
  interface Props {
22
15
  modelValue?: PlateMapEditorState
@@ -428,7 +421,3 @@ useEventListener(() => document, 'keydown', handleKeyDown)
428
421
  </Teleport>
429
422
  </div>
430
423
  </template>
431
-
432
- <style>
433
- @import '../styles/components/plate-map-editor.css';
434
- </style>
@@ -152,7 +152,3 @@ const rootStyle = computed(() =>
152
152
  />
153
153
  </span>
154
154
  </template>
155
-
156
- <style>
157
- @import '../styles/components/plugin-icon.css';
158
- </style>
@@ -1,8 +1,13 @@
1
1
  import type {
2
2
  AccountMenuItem,
3
+ ExperimentSummary,
4
+ PageSelectorItem,
3
5
  PageSelectorItemInput,
6
+ PillNavItem,
4
7
  PillNavItemInput,
8
+ PillNavOption,
5
9
  PluginSwitcherInfo,
10
+ PluginSwitcherPlugin,
6
11
  SidebarToolSection,
7
12
  TopBarSettingsConfig,
8
13
  TopBarVariant,
@@ -156,6 +161,39 @@ export interface PluginWorkspaceViewProps {
156
161
  sidebarCloseLabel?: string
157
162
  }
158
163
 
164
+ /**
165
+ * Event map for PluginWorkspaceView, shared with the {@link usePluginWorkspace} composable
166
+ * so its internal pieces can emit through the exact same typed contract as the public component.
167
+ */
168
+ export interface PluginWorkspaceViewEmits {
169
+ 'update:activeView': [value: string]
170
+ 'page-selector-select': [page: PageSelectorItem]
171
+ 'pill-select': [item: PillNavItem]
172
+ 'pill-option-select': [option: PillNavOption, item: PillNavItem]
173
+ 'plugin-switcher-select': [plugin: PluginSwitcherPlugin]
174
+ 'plugin-switcher-install': []
175
+ 'account-menu-select': [item: AccountMenuItem]
176
+ 'sign-out': []
177
+ 'notifications-click': []
178
+ 'settings-values-change': [data: Record<string, unknown>]
179
+ 'admin-click': []
180
+ 'experiment-select': [experiment: ExperimentSummary]
181
+ 'experiment-detach': []
182
+ 'update:modelValue': [values: Record<string, unknown>]
183
+ 'update:values': [values: Record<string, unknown>]
184
+ 'update:sidebarCollapsed': [value: boolean]
185
+ 'update:toggle': [sectionId: string, value: boolean]
186
+ 'section-action': [sectionId: string, actionId: string]
187
+ 'form-submit': [sectionId: string, values: Record<string, unknown>]
188
+ 'form-cancel': [sectionId: string]
189
+ }
190
+
191
+ /** Typed `emit` function shape produced by `defineEmits<PluginWorkspaceViewEmits>()`. */
192
+ export type PluginWorkspaceViewEmit = <K extends keyof PluginWorkspaceViewEmits>(
193
+ event: K,
194
+ ...args: PluginWorkspaceViewEmits[K]
195
+ ) => void
196
+
159
197
  export interface PluginWorkspaceSlotProps {
160
198
  activeView: string
161
199
  setActiveView: (viewId: string) => void