@morscherlab/mint-sdk 1.0.0-rc.4 → 1.0.0-rc.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/__tests__/components/AppTopBar.navigation.test.d.ts +1 -0
- package/dist/__tests__/components/DoseCalculatorVolumeField.test.d.ts +1 -0
- package/dist/__tests__/components/PlateMapEditorToolbarInternal.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.controls.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.navigation.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.shell.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStep.presentation.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStepEditor.state.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStepParameterField.test.d.ts +1 -0
- package/dist/__tests__/components/ReagentList.presentation.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.colors.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.drag.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.groups.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.selection.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelectorSampleRow.test.d.ts +1 -0
- package/dist/__tests__/components/ScheduleCalendar.test.d.ts +1 -0
- package/dist/__tests__/components/SettingsModal.schema.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.colors.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.conditions.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.geometry.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.interaction.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.legend.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.rendering.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.sampleDrop.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/classify.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/columns.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/compose.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/cooccurrence.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/fingerprint.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/integration.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/template.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/tokenize.test.d.ts +1 -0
- package/dist/__tests__/composables/useAutoGroupInputSources.test.d.ts +1 -0
- package/dist/__tests__/composables/useScheduleCalendarLayout.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsComponents.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsExports.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsParsing.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsTemplates.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsTheme.test.d.ts +1 -0
- package/dist/components/AppSidebar.vue.d.ts +3 -3
- package/dist/components/AppTopBar.navigation.d.ts +11 -0
- package/dist/components/BaseButton.vue.d.ts +1 -1
- package/dist/components/BaseCheckbox.vue.d.ts +1 -1
- package/dist/components/BaseInput.vue.d.ts +2 -2
- package/dist/components/BasePill.vue.d.ts +1 -1
- package/dist/components/BaseRadioGroup.vue.d.ts +1 -1
- package/dist/components/BaseSelect.vue.d.ts +1 -1
- package/dist/components/BaseSlider.vue.d.ts +2 -2
- package/dist/components/BaseTextarea.vue.d.ts +2 -2
- package/dist/components/BaseToggle.vue.d.ts +1 -1
- package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +2 -2
- package/dist/components/BioTemplatePackWorkspaceView.vue.d.ts +1 -1
- package/dist/components/ColorSlider.vue.d.ts +2 -2
- package/dist/components/ConcentrationInput.vue.d.ts +2 -2
- package/dist/components/ControlWorkspaceView.vue.d.ts +3 -3
- package/dist/components/DatePicker.vue.d.ts +1 -1
- package/dist/components/DateTimePicker.vue.d.ts +2 -2
- package/dist/components/DoseCalculatorVolumeField.vue.d.ts +15 -0
- package/dist/components/DoseDesignWorkspaceView.vue.d.ts +1 -1
- package/dist/components/DropdownButton.vue.d.ts +1 -1
- package/dist/components/FileUploader.vue.d.ts +2 -2
- package/dist/components/FormulaInput.vue.d.ts +2 -2
- package/dist/components/IconButton.vue.d.ts +1 -1
- package/dist/components/LoadingSpinner.vue.d.ts +1 -1
- package/dist/components/MoleculeInput.vue.d.ts +2 -2
- package/dist/components/MultiSelect.vue.d.ts +1 -1
- package/dist/components/NumberInput.vue.d.ts +1 -1
- package/dist/components/PlateMapEditor.vue.d.ts +6 -6
- package/dist/components/PluginWorkspaceView.controls.d.ts +28 -0
- package/dist/components/PluginWorkspaceView.navigation.d.ts +29 -0
- package/dist/components/PluginWorkspaceView.props.d.ts +151 -0
- package/dist/components/PluginWorkspaceView.shell.d.ts +19 -0
- package/dist/components/PluginWorkspaceView.vue.d.ts +46 -195
- package/dist/components/ProgressBar.vue.d.ts +1 -1
- package/dist/components/ProtocolStep.presentation.d.ts +4 -0
- package/dist/components/ProtocolStepEditor.state.d.ts +18 -0
- package/dist/components/ProtocolStepParameterField.vue.d.ts +12 -0
- package/dist/components/ReagentList.presentation.d.ts +16 -0
- package/dist/components/ResourceCard.vue.d.ts +1 -1
- package/dist/components/SampleSelector.colors.d.ts +13 -0
- package/dist/components/SampleSelector.drag.d.ts +24 -0
- package/dist/components/SampleSelector.groups.d.ts +15 -0
- package/dist/components/SampleSelector.selection.d.ts +26 -0
- package/dist/components/SampleSelector.vue.d.ts +4 -1
- package/dist/components/SampleSelectorSampleRow.vue.d.ts +21 -0
- package/dist/components/SegmentedControl.vue.d.ts +1 -1
- package/dist/components/SequenceInput.vue.d.ts +2 -2
- package/dist/components/SequenceProgressBar.vue.d.ts +1 -1
- package/dist/components/SettingsModal.schema.d.ts +9 -0
- package/dist/components/StatusIndicator.vue.d.ts +1 -1
- package/dist/components/TagsInput.vue.d.ts +2 -2
- package/dist/components/TimePicker.vue.d.ts +2 -2
- package/dist/components/TimeRangeInput.vue.d.ts +1 -1
- package/dist/components/UnitInput.vue.d.ts +2 -2
- package/dist/components/WellPlate.colors.d.ts +9 -0
- package/dist/components/WellPlate.conditions.d.ts +26 -0
- package/dist/components/WellPlate.geometry.d.ts +23 -0
- package/dist/components/WellPlate.interaction.d.ts +71 -0
- package/dist/components/WellPlate.legend.d.ts +2 -0
- package/dist/components/WellPlate.rendering.d.ts +24 -0
- package/dist/components/WellPlate.sampleDrop.d.ts +8 -0
- package/dist/components/WellPlate.vue.d.ts +1 -1
- package/dist/components/index.js +2 -2
- package/dist/components/internal/ActionItemInternal.vue.d.ts +1 -1
- package/dist/components/internal/PlateMapEditorToolbarInternal.vue.d.ts +28 -0
- package/dist/{components-DafPc4rM.js → components-DtHA2bgp.js} +3754 -2991
- package/dist/components-DtHA2bgp.js.map +1 -0
- package/dist/composables/autoGroup/classKey.d.ts +4 -0
- package/dist/composables/autoGroup/classify.d.ts +28 -0
- package/dist/composables/autoGroup/colors.d.ts +2 -0
- package/dist/composables/autoGroup/columns.d.ts +10 -0
- package/dist/composables/autoGroup/compose.d.ts +8 -0
- package/dist/composables/autoGroup/cooccurrence.d.ts +2 -0
- package/dist/composables/autoGroup/csv-shim.d.ts +2 -0
- package/dist/composables/autoGroup/fingerprint.d.ts +3 -0
- package/dist/composables/autoGroup/index.d.ts +16 -0
- package/dist/composables/autoGroup/replicatePreGroup.d.ts +38 -0
- package/dist/composables/autoGroup/template.d.ts +15 -0
- package/dist/composables/autoGroup/tokenize.d.ts +8 -0
- package/dist/composables/autoGroupConstants.d.ts +1 -0
- package/dist/composables/autoGroupGrouping.d.ts +3 -0
- package/dist/composables/controlComponentBindings.d.ts +1 -1
- package/dist/composables/controlSchemaAdapters.d.ts +1 -1
- package/dist/composables/controlSchemaDoseDesign.d.ts +11 -0
- package/dist/composables/controlSchemaLayout.d.ts +1 -1
- package/dist/composables/controlSchemaModel.d.ts +5 -0
- package/dist/composables/controlSchemaNormalize.d.ts +1 -1
- package/dist/composables/controlSchemaTypes.d.ts +305 -0
- package/dist/composables/controlWorkspaceOptions.d.ts +1 -1
- package/dist/composables/formBuilderSchema.d.ts +18 -0
- package/dist/composables/index.js +3 -3
- package/dist/composables/pluginEndpointBuilder.d.ts +13 -0
- package/dist/composables/protocolTemplateCatalog.d.ts +26 -0
- package/dist/composables/useAutoGroup.d.ts +61 -74
- package/dist/composables/useAutoGroupInputSources.d.ts +32 -0
- package/dist/composables/useBioTemplateControls.d.ts +1 -1
- package/dist/composables/useBioTemplatePresetWorkspace.d.ts +1 -1
- package/dist/composables/useBioTemplateWorkspace.d.ts +1 -1
- package/dist/composables/useControlSchema.d.ts +4 -316
- package/dist/composables/useControlWorkspace.d.ts +1 -1
- package/dist/composables/useForm.d.ts +2 -33
- package/dist/composables/useFormBuilder.d.ts +2 -9
- package/dist/composables/useFormValidation.d.ts +34 -0
- package/dist/composables/usePluginClient.d.ts +1 -4
- package/dist/composables/useProtocolTemplates.d.ts +2 -24
- package/dist/composables/useScheduleCalendarLayout.d.ts +49 -0
- package/dist/{composables-BMkPQhVK.js → composables-Dlg8jenH.js} +33 -31
- package/dist/composables-Dlg8jenH.js.map +1 -0
- package/dist/index.js +4 -4
- package/dist/install.js +2 -2
- package/dist/styles.css +547 -516
- package/dist/templates/controlSchemaTypes.d.ts +1 -1
- package/dist/templates/index.js +1 -1
- package/dist/templates/templateAdapterTypes.d.ts +48 -0
- package/dist/templates/templateCreateOptions.d.ts +165 -0
- package/dist/templates/templateQpcrTypes.d.ts +42 -0
- package/dist/templates/types.d.ts +5 -250
- package/dist/{templates-bUAWMn5L.js → templates-DtdUvJ4c.js} +144 -136
- package/dist/templates-DtdUvJ4c.js.map +1 -0
- package/dist/types/auto-group.d.ts +79 -9
- package/dist/types/componentLabTypes.d.ts +161 -0
- package/dist/types/componentWorkflowTypes.d.ts +150 -0
- package/dist/types/components.d.ts +2 -311
- package/dist/{useProtocolTemplates-QZtHFFH2.js → useProtocolTemplates-Bm5vyH4_.js} +1220 -454
- package/dist/useProtocolTemplates-Bm5vyH4_.js.map +1 -0
- package/package.json +1 -1
- package/src/__tests__/components/AppTopBar.navigation.test.ts +70 -0
- package/src/__tests__/components/DoseCalculatorVolumeField.test.ts +53 -0
- package/src/__tests__/components/PlateMapEditorToolbarInternal.test.ts +54 -0
- package/src/__tests__/components/PluginWorkspaceView.controls.test.ts +156 -0
- package/src/__tests__/components/PluginWorkspaceView.navigation.test.ts +102 -0
- package/src/__tests__/components/PluginWorkspaceView.shell.test.ts +41 -0
- package/src/__tests__/components/ProtocolStep.presentation.test.ts +31 -0
- package/src/__tests__/components/ProtocolStepEditor.state.test.ts +165 -0
- package/src/__tests__/components/ProtocolStepParameterField.test.ts +44 -0
- package/src/__tests__/components/ReagentList.presentation.test.ts +68 -0
- package/src/__tests__/components/SampleSelector.colors.test.ts +49 -0
- package/src/__tests__/components/SampleSelector.drag.test.ts +100 -0
- package/src/__tests__/components/SampleSelector.groups.test.ts +81 -0
- package/src/__tests__/components/SampleSelector.selection.test.ts +70 -0
- package/src/__tests__/components/SampleSelector.test.ts +32 -0
- package/src/__tests__/components/SampleSelectorSampleRow.test.ts +37 -0
- package/src/__tests__/components/ScheduleCalendar.test.ts +44 -0
- package/src/__tests__/components/SettingsModal.schema.test.ts +97 -0
- package/src/__tests__/components/WellPlate.colors.test.ts +28 -0
- package/src/__tests__/components/WellPlate.conditions.test.ts +68 -0
- package/src/__tests__/components/WellPlate.geometry.test.ts +54 -0
- package/src/__tests__/components/WellPlate.interaction.test.ts +171 -0
- package/src/__tests__/components/WellPlate.legend.test.ts +13 -0
- package/src/__tests__/components/WellPlate.rendering.test.ts +122 -0
- package/src/__tests__/components/WellPlate.sampleDrop.test.ts +70 -0
- package/src/__tests__/composables/autoGroup/classify.test.ts +107 -0
- package/src/__tests__/composables/autoGroup/columns.test.ts +135 -0
- package/src/__tests__/composables/autoGroup/compose.test.ts +227 -0
- package/src/__tests__/composables/autoGroup/cooccurrence.test.ts +91 -0
- package/src/__tests__/composables/autoGroup/fingerprint.test.ts +50 -0
- package/src/__tests__/composables/autoGroup/integration.test.ts +79 -0
- package/src/__tests__/composables/autoGroup/template.test.ts +70 -0
- package/src/__tests__/composables/autoGroup/tokenize.test.ts +33 -0
- package/src/__tests__/composables/useAutoGroup.test.ts +129 -625
- package/src/__tests__/composables/useAutoGroupInputSources.test.ts +107 -0
- package/src/__tests__/composables/useControlSchema.test.ts +23 -0
- package/src/__tests__/composables/useScheduleCalendarLayout.test.ts +89 -0
- package/src/__tests__/docs/extractDocsComponents.test.ts +142 -0
- package/src/__tests__/docs/extractDocsExports.test.ts +77 -0
- package/src/__tests__/docs/extractDocsParsing.test.ts +69 -0
- package/src/__tests__/docs/extractDocsTemplates.test.ts +54 -0
- package/src/__tests__/docs/extractDocsTheme.test.ts +89 -0
- package/src/__tests__/docs/frontendDocsCatalog.test.ts +1 -1
- package/src/__tests__/fixtures/auto-group/mixed-lc-ms-batch.txt +187 -0
- package/src/components/AppSidebar.vue +2 -6
- package/src/components/AppTopBar.navigation.ts +62 -0
- package/src/components/AppTopBar.vue +17 -44
- package/src/components/AutoGroupModal.story.vue +50 -0
- package/src/components/AutoGroupModal.vue +441 -158
- package/src/components/ControlWorkspaceView.vue +2 -6
- package/src/components/DoseCalculator.vue +13 -73
- package/src/components/DoseCalculatorVolumeField.vue +61 -0
- package/src/components/ExperimentTimeline.vue +6 -31
- package/src/components/FormBuilder.vue +2 -7
- package/src/components/PlateMapEditor.vue +32 -106
- package/src/components/PluginWorkspaceView.controls.ts +182 -0
- package/src/components/PluginWorkspaceView.navigation.ts +106 -0
- package/src/components/PluginWorkspaceView.props.ts +174 -0
- package/src/components/PluginWorkspaceView.shell.ts +66 -0
- package/src/components/PluginWorkspaceView.vue +85 -404
- package/src/components/ProtocolStep.presentation.ts +31 -0
- package/src/components/ProtocolStepEditor.state.ts +104 -0
- package/src/components/ProtocolStepEditor.vue +48 -179
- package/src/components/ProtocolStepParameterField.vue +134 -0
- package/src/components/ReagentList.presentation.ts +105 -0
- package/src/components/ReagentList.vue +16 -79
- package/src/components/SampleSelector.colors.ts +43 -0
- package/src/components/SampleSelector.drag.ts +164 -0
- package/src/components/SampleSelector.groups.ts +109 -0
- package/src/components/SampleSelector.selection.ts +103 -0
- package/src/components/SampleSelector.vue +82 -349
- package/src/components/SampleSelectorSampleRow.vue +64 -0
- package/src/components/ScheduleCalendar.vue +44 -199
- package/src/components/SettingsModal.schema.ts +71 -0
- package/src/components/SettingsModal.vue +16 -46
- package/src/components/WellPlate.colors.ts +56 -0
- package/src/components/WellPlate.conditions.ts +100 -0
- package/src/components/WellPlate.geometry.ts +91 -0
- package/src/components/WellPlate.interaction.ts +272 -0
- package/src/components/WellPlate.legend.ts +8 -0
- package/src/components/WellPlate.rendering.ts +105 -0
- package/src/components/WellPlate.sampleDrop.ts +73 -0
- package/src/components/WellPlate.vue +102 -550
- package/src/components/internal/PlateMapEditorToolbarInternal.vue +128 -0
- package/src/composables/autoGroup/classKey.ts +5 -0
- package/src/composables/autoGroup/classify.ts +205 -0
- package/src/composables/autoGroup/colors.ts +6 -0
- package/src/composables/autoGroup/columns.ts +226 -0
- package/src/composables/autoGroup/compose.ts +156 -0
- package/src/composables/autoGroup/cooccurrence.ts +46 -0
- package/src/composables/autoGroup/csv-shim.ts +44 -0
- package/src/composables/autoGroup/fingerprint.ts +49 -0
- package/src/composables/autoGroup/index.ts +20 -0
- package/src/composables/autoGroup/replicatePreGroup.ts +90 -0
- package/src/composables/autoGroup/template.ts +126 -0
- package/src/composables/autoGroup/tokenize.ts +41 -0
- package/src/composables/autoGroup/vocab.json +67 -0
- package/src/composables/autoGroupConstants.ts +4 -0
- package/src/composables/autoGroupGrouping.ts +148 -0
- package/src/composables/controlComponentBindings.ts +1 -1
- package/src/composables/controlSchemaAdapters.ts +1 -1
- package/src/composables/controlSchemaDoseDesign.ts +215 -0
- package/src/composables/controlSchemaFormFields.ts +1 -1
- package/src/composables/controlSchemaLayout.ts +1 -1
- package/src/composables/controlSchemaModel.ts +163 -0
- package/src/composables/controlSchemaNormalize.ts +1 -1
- package/src/composables/controlSchemaTypes.ts +364 -0
- package/src/composables/controlWorkspaceOptions.ts +1 -1
- package/src/composables/formBuilderSchema.ts +153 -0
- package/src/composables/pluginEndpointBuilder.ts +203 -0
- package/src/composables/protocolTemplateCatalog.ts +325 -0
- package/src/composables/useAutoGroup.ts +395 -549
- package/src/composables/useAutoGroupInputSources.ts +147 -0
- package/src/composables/useBioTemplateControls.ts +1 -1
- package/src/composables/useBioTemplatePresetWorkspace.ts +1 -1
- package/src/composables/useBioTemplateWorkspace.ts +1 -1
- package/src/composables/useControlSchema.ts +21 -692
- package/src/composables/useControlWorkspace.ts +7 -13
- package/src/composables/useForm.ts +5 -187
- package/src/composables/useFormBuilder.ts +11 -153
- package/src/composables/useFormValidation.ts +154 -0
- package/src/composables/usePluginClient.ts +10 -193
- package/src/composables/useProtocolTemplates.ts +10 -328
- package/src/composables/useScheduleCalendarLayout.ts +287 -0
- package/src/styles/components/auto-group-modal.css +248 -310
- package/src/templates/controlSchemaTypes.ts +1 -1
- package/src/templates/templateAdapterTypes.ts +58 -0
- package/src/templates/templateCreateOptions.ts +208 -0
- package/src/templates/templateQpcrTypes.ts +48 -0
- package/src/templates/types.ts +79 -275
- package/src/types/auto-group.ts +107 -9
- package/src/types/componentLabTypes.ts +235 -0
- package/src/types/componentWorkflowTypes.ts +190 -0
- package/src/types/components.ts +74 -424
- package/dist/components-DafPc4rM.js.map +0 -1
- package/dist/composables-BMkPQhVK.js.map +0 -1
- package/dist/templates-bUAWMn5L.js.map +0 -1
- package/dist/useProtocolTemplates-QZtHFFH2.js.map +0 -1
|
@@ -0,0 +1,58 @@
|
|
|
1
|
+
import type {
|
|
2
|
+
DataFrameColumn,
|
|
3
|
+
PlateCondition,
|
|
4
|
+
PlateMapEditorState,
|
|
5
|
+
ProtocolStep,
|
|
6
|
+
Reagent,
|
|
7
|
+
ScheduleEvent,
|
|
8
|
+
SelectOption,
|
|
9
|
+
Well,
|
|
10
|
+
} from '../types'
|
|
11
|
+
|
|
12
|
+
export type PlateMapEditorAdapterResult = PlateMapEditorState
|
|
13
|
+
export type WellMapAdapterResult = Record<string, Well>
|
|
14
|
+
export type SampleRowsAdapterResult = Array<Record<string, unknown>>
|
|
15
|
+
export type SampleColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
16
|
+
export interface DataFrameAdapterResult {
|
|
17
|
+
data: Array<Record<string, unknown>>
|
|
18
|
+
columns: DataFrameColumn<Record<string, unknown>>[]
|
|
19
|
+
rowKey?: string
|
|
20
|
+
}
|
|
21
|
+
export type SampleDataFrameAdapterResult = DataFrameAdapterResult
|
|
22
|
+
export type SampleOptionsAdapterResult = SelectOption<string>[]
|
|
23
|
+
export type SamplePrepRowsAdapterResult = Array<Record<string, unknown>>
|
|
24
|
+
export type SamplePrepColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
25
|
+
export type SamplePrepDataFrameAdapterResult = DataFrameAdapterResult
|
|
26
|
+
export type DoseConditionsAdapterResult = PlateCondition[]
|
|
27
|
+
export type CalibrationCurveRowsAdapterResult = Array<Record<string, unknown>>
|
|
28
|
+
export type CalibrationCurveColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
29
|
+
export type CalibrationCurveDataFrameAdapterResult = DataFrameAdapterResult
|
|
30
|
+
export type TimeCourseRowsAdapterResult = Array<Record<string, unknown>>
|
|
31
|
+
export type TimeCourseColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
32
|
+
export type TimeCourseDataFrameAdapterResult = DataFrameAdapterResult
|
|
33
|
+
export type TimeCourseStepsAdapterResult = ProtocolStep[]
|
|
34
|
+
export type ProtocolStepsAdapterResult = ProtocolStep[]
|
|
35
|
+
export type ProtocolRowsAdapterResult = Array<Record<string, unknown>>
|
|
36
|
+
export type ProtocolColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
37
|
+
export type ProtocolDataFrameAdapterResult = DataFrameAdapterResult
|
|
38
|
+
export type AssayMatrixRowsAdapterResult = Array<Record<string, unknown>>
|
|
39
|
+
export type AssayMatrixColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
40
|
+
export type AssayMatrixDataFrameAdapterResult = DataFrameAdapterResult
|
|
41
|
+
export type AssayMatrixSampleOptionsAdapterResult = SelectOption<string>[]
|
|
42
|
+
export type ReagentListItemsAdapterResult = Reagent[]
|
|
43
|
+
export type ReagentRowsAdapterResult = Array<Record<string, unknown>>
|
|
44
|
+
export type ReagentColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
45
|
+
export type ReagentDataFrameAdapterResult = DataFrameAdapterResult
|
|
46
|
+
export type FlowPanelRowsAdapterResult = Array<Record<string, unknown>>
|
|
47
|
+
export type FlowPanelColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
48
|
+
export type FlowPanelDataFrameAdapterResult = DataFrameAdapterResult
|
|
49
|
+
export type InstrumentRunRowsAdapterResult = Array<Record<string, unknown>>
|
|
50
|
+
export type InstrumentRunColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
51
|
+
export type InstrumentRunDataFrameAdapterResult = DataFrameAdapterResult
|
|
52
|
+
export type InstrumentRunStepsAdapterResult = ProtocolStep[]
|
|
53
|
+
export type InstrumentRunScheduleEventsAdapterResult = ScheduleEvent[]
|
|
54
|
+
export type QpcrRowsAdapterResult = Array<Record<string, unknown>>
|
|
55
|
+
export type QpcrColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
56
|
+
export type QpcrDataFrameAdapterResult = DataFrameAdapterResult
|
|
57
|
+
export type QpcrWellMapAdapterResult = Record<string, Well>
|
|
58
|
+
export type TemplateDataFrameAdapterResult = DataFrameAdapterResult
|
|
@@ -0,0 +1,208 @@
|
|
|
1
|
+
import type { WellPlateFormat } from '../types'
|
|
2
|
+
import type {
|
|
3
|
+
AssayFeature,
|
|
4
|
+
AssaySample,
|
|
5
|
+
CalibrationAcceptanceInput,
|
|
6
|
+
CalibrationModel,
|
|
7
|
+
CalibrationPointInput,
|
|
8
|
+
CompoundDoseSeries,
|
|
9
|
+
ControlDefinition,
|
|
10
|
+
FlowPanelControl,
|
|
11
|
+
FlowPanelMarker,
|
|
12
|
+
InstrumentMethodInput,
|
|
13
|
+
InstrumentRunItemInput,
|
|
14
|
+
PlateMapTemplate,
|
|
15
|
+
PlateMapTemplateData,
|
|
16
|
+
ProtocolStepRecord,
|
|
17
|
+
ReagentTemplateInput,
|
|
18
|
+
SampleColumn,
|
|
19
|
+
SampleGroupDefinition,
|
|
20
|
+
SamplePrepStepInput,
|
|
21
|
+
SamplePrepStepType,
|
|
22
|
+
SampleRecord,
|
|
23
|
+
TemplateSample,
|
|
24
|
+
TimeCourseCondition,
|
|
25
|
+
TimePoint,
|
|
26
|
+
TimeUnit,
|
|
27
|
+
} from './types'
|
|
28
|
+
import type {
|
|
29
|
+
QpcrChemistry,
|
|
30
|
+
QpcrSample,
|
|
31
|
+
QpcrTarget,
|
|
32
|
+
} from './templateQpcrTypes'
|
|
33
|
+
|
|
34
|
+
export interface CreateBioTemplatePackCollectionOptions {
|
|
35
|
+
metadata?: Record<string, unknown>
|
|
36
|
+
}
|
|
37
|
+
|
|
38
|
+
export interface CreatePlateMapTemplateOptions {
|
|
39
|
+
name?: string
|
|
40
|
+
id?: string
|
|
41
|
+
format?: WellPlateFormat
|
|
42
|
+
samples?: Array<string | TemplateSample>
|
|
43
|
+
metadata?: Record<string, unknown>
|
|
44
|
+
}
|
|
45
|
+
|
|
46
|
+
export interface CreateSampleSheetTemplateOptions {
|
|
47
|
+
samples: SampleRecord[]
|
|
48
|
+
columns?: SampleColumn[]
|
|
49
|
+
groups?: SampleGroupDefinition[]
|
|
50
|
+
metadata?: Record<string, unknown>
|
|
51
|
+
}
|
|
52
|
+
|
|
53
|
+
export interface CreateSamplePrepTemplateOptions {
|
|
54
|
+
samples: Array<string | SamplePrepStepInput>
|
|
55
|
+
prepType?: SamplePrepStepType
|
|
56
|
+
protocolName?: string
|
|
57
|
+
volumeUnit?: string
|
|
58
|
+
inputVolume?: number
|
|
59
|
+
outputVolume?: number
|
|
60
|
+
metadata?: Record<string, unknown>
|
|
61
|
+
}
|
|
62
|
+
|
|
63
|
+
export interface CreateDoseResponseTemplateOptions {
|
|
64
|
+
compounds: Record<string, number[]> | CompoundDoseSeries[]
|
|
65
|
+
unit: string
|
|
66
|
+
replicates?: number
|
|
67
|
+
controls?: ControlDefinition[]
|
|
68
|
+
layout?: PlateMapTemplate | PlateMapTemplateData
|
|
69
|
+
metadata?: Record<string, unknown>
|
|
70
|
+
}
|
|
71
|
+
|
|
72
|
+
export interface CreateCalibrationCurveTemplateOptions {
|
|
73
|
+
concentrations: Array<number | CalibrationPointInput>
|
|
74
|
+
analyte?: string
|
|
75
|
+
unit?: string
|
|
76
|
+
responseUnit?: string
|
|
77
|
+
model?: CalibrationModel
|
|
78
|
+
includeBlank?: boolean
|
|
79
|
+
includeQc?: boolean
|
|
80
|
+
acceptance?: CalibrationAcceptanceInput
|
|
81
|
+
metadata?: Record<string, unknown>
|
|
82
|
+
}
|
|
83
|
+
|
|
84
|
+
export interface CreateTimeCourseTemplateOptions {
|
|
85
|
+
timepoints: Array<number | TimePoint>
|
|
86
|
+
unit: TimeUnit
|
|
87
|
+
conditions: Array<string | TimeCourseCondition>
|
|
88
|
+
replicates?: number
|
|
89
|
+
metadata?: Record<string, unknown>
|
|
90
|
+
}
|
|
91
|
+
|
|
92
|
+
export interface CreateAssayMatrixTemplateOptions {
|
|
93
|
+
samples: Array<string | AssaySample>
|
|
94
|
+
features: Array<string | AssayFeature>
|
|
95
|
+
values?: Record<string, Record<string, number | null | undefined>>
|
|
96
|
+
metadata?: Record<string, unknown>
|
|
97
|
+
}
|
|
98
|
+
|
|
99
|
+
export interface CreateProtocolStepsTemplateOptions {
|
|
100
|
+
steps: Array<string | (Partial<ProtocolStepRecord> & { name: string })>
|
|
101
|
+
metadata?: Record<string, unknown>
|
|
102
|
+
}
|
|
103
|
+
|
|
104
|
+
export interface CreateReagentListTemplateOptions {
|
|
105
|
+
reagents: Array<string | ReagentTemplateInput>
|
|
106
|
+
metadata?: Record<string, unknown>
|
|
107
|
+
}
|
|
108
|
+
|
|
109
|
+
export interface CreateFlowCytometryPanelTemplateOptions {
|
|
110
|
+
markers: Array<string | (Partial<FlowPanelMarker> & { marker: string })>
|
|
111
|
+
controls?: Array<string | (Partial<FlowPanelControl> & { name: string })>
|
|
112
|
+
instrument?: string
|
|
113
|
+
includeDefaultControls?: boolean
|
|
114
|
+
metadata?: Record<string, unknown>
|
|
115
|
+
}
|
|
116
|
+
|
|
117
|
+
export interface CreateInstrumentRunTemplateOptions {
|
|
118
|
+
items: Array<string | InstrumentRunItemInput>
|
|
119
|
+
method?: string | InstrumentMethodInput
|
|
120
|
+
instrument?: string
|
|
121
|
+
includeBlanks?: boolean
|
|
122
|
+
includeQc?: boolean
|
|
123
|
+
metadata?: Record<string, unknown>
|
|
124
|
+
}
|
|
125
|
+
|
|
126
|
+
export interface CreateQpcrPlateTemplateOptions {
|
|
127
|
+
samples: Array<string | QpcrSample>
|
|
128
|
+
targets: Array<string | QpcrTarget>
|
|
129
|
+
format?: WellPlateFormat
|
|
130
|
+
replicates?: number
|
|
131
|
+
includeNoTemplateControls?: boolean
|
|
132
|
+
instrument?: string
|
|
133
|
+
chemistry?: QpcrChemistry
|
|
134
|
+
metadata?: Record<string, unknown>
|
|
135
|
+
}
|
|
136
|
+
|
|
137
|
+
export interface CreateWellPlateScreenCollectionOptions {
|
|
138
|
+
samples?: Array<string | SampleRecord>
|
|
139
|
+
compounds?: Record<string, number[]> | CompoundDoseSeries[]
|
|
140
|
+
unit?: string
|
|
141
|
+
replicates?: number
|
|
142
|
+
plateName?: string
|
|
143
|
+
plateFormat?: WellPlateFormat
|
|
144
|
+
metadata?: Record<string, unknown>
|
|
145
|
+
}
|
|
146
|
+
|
|
147
|
+
export interface CreateQpcrExpressionCollectionOptions {
|
|
148
|
+
samples?: Array<string | SampleRecord>
|
|
149
|
+
targets?: Array<string | QpcrTarget>
|
|
150
|
+
chemistry?: QpcrChemistry
|
|
151
|
+
includeNoTemplateControls?: boolean
|
|
152
|
+
format?: WellPlateFormat
|
|
153
|
+
replicates?: number
|
|
154
|
+
instrument?: string
|
|
155
|
+
metadata?: Record<string, unknown>
|
|
156
|
+
}
|
|
157
|
+
|
|
158
|
+
export interface CreateLcmsBatchCollectionOptions {
|
|
159
|
+
samples?: Array<string | SampleRecord>
|
|
160
|
+
features?: Array<string | AssayFeature>
|
|
161
|
+
instrument?: string
|
|
162
|
+
method?: string | InstrumentMethodInput
|
|
163
|
+
includeQc?: boolean
|
|
164
|
+
metadata?: Record<string, unknown>
|
|
165
|
+
}
|
|
166
|
+
|
|
167
|
+
export interface CreateTargetedMetabolomicsCollectionOptions {
|
|
168
|
+
samples?: Array<string | SampleRecord>
|
|
169
|
+
metabolites?: Array<string | AssayFeature>
|
|
170
|
+
internalStandards?: Array<string | ReagentTemplateInput>
|
|
171
|
+
standardConcentrations?: number[]
|
|
172
|
+
concentrationUnit?: string
|
|
173
|
+
responseUnit?: string
|
|
174
|
+
calibrationAnalyte?: string
|
|
175
|
+
instrument?: string
|
|
176
|
+
method?: string | InstrumentMethodInput
|
|
177
|
+
prepType?: SamplePrepStepType
|
|
178
|
+
outputVolume?: number
|
|
179
|
+
includeQc?: boolean
|
|
180
|
+
metadata?: Record<string, unknown>
|
|
181
|
+
}
|
|
182
|
+
|
|
183
|
+
export interface CreateElisaAssayCollectionOptions {
|
|
184
|
+
samples?: Array<string | SampleRecord>
|
|
185
|
+
analyte?: string
|
|
186
|
+
standardConcentrations?: number[]
|
|
187
|
+
unit?: string
|
|
188
|
+
responseUnit?: string
|
|
189
|
+
plateName?: string
|
|
190
|
+
plateFormat?: WellPlateFormat
|
|
191
|
+
metadata?: Record<string, unknown>
|
|
192
|
+
}
|
|
193
|
+
|
|
194
|
+
export interface CreateFlowCytometryAssayCollectionOptions {
|
|
195
|
+
samples?: Array<string | SampleRecord>
|
|
196
|
+
markers?: CreateFlowCytometryPanelTemplateOptions['markers']
|
|
197
|
+
features?: Array<string | AssayFeature>
|
|
198
|
+
instrument?: string
|
|
199
|
+
includeDefaultControls?: boolean
|
|
200
|
+
metadata?: Record<string, unknown>
|
|
201
|
+
}
|
|
202
|
+
|
|
203
|
+
export interface CreateWesternBlotAssayCollectionOptions {
|
|
204
|
+
samples?: Array<string | SampleRecord>
|
|
205
|
+
targets?: Array<string | AssayFeature>
|
|
206
|
+
loadingControl?: string
|
|
207
|
+
metadata?: Record<string, unknown>
|
|
208
|
+
}
|
|
@@ -0,0 +1,48 @@
|
|
|
1
|
+
import type { WellPlateFormat } from '../types'
|
|
2
|
+
import type { BioTemplateEnvelope } from './types'
|
|
3
|
+
|
|
4
|
+
export type QpcrChemistry = 'sybr' | 'taqman' | 'probe' | 'evagreen' | 'other'
|
|
5
|
+
export type QpcrControlKind = 'sample' | 'no-template' | 'no-rt' | 'positive' | 'standard' | 'calibrator'
|
|
6
|
+
|
|
7
|
+
export interface QpcrSample {
|
|
8
|
+
sampleId: string
|
|
9
|
+
name?: string
|
|
10
|
+
group?: string
|
|
11
|
+
metadata?: Record<string, unknown>
|
|
12
|
+
}
|
|
13
|
+
|
|
14
|
+
export interface QpcrTarget {
|
|
15
|
+
id: string
|
|
16
|
+
name: string
|
|
17
|
+
assayId?: string
|
|
18
|
+
reporter?: string
|
|
19
|
+
quencher?: string
|
|
20
|
+
ampliconBp?: number
|
|
21
|
+
metadata?: Record<string, unknown>
|
|
22
|
+
}
|
|
23
|
+
|
|
24
|
+
export interface QpcrReaction {
|
|
25
|
+
id: string
|
|
26
|
+
wellId: string
|
|
27
|
+
sampleId?: string
|
|
28
|
+
targetId: string
|
|
29
|
+
replicate: number
|
|
30
|
+
controlKind: QpcrControlKind
|
|
31
|
+
cq?: number | null
|
|
32
|
+
quantity?: number | null
|
|
33
|
+
flags: string[]
|
|
34
|
+
metadata?: Record<string, unknown>
|
|
35
|
+
}
|
|
36
|
+
|
|
37
|
+
export interface QpcrPlateTemplateData {
|
|
38
|
+
plateId: string
|
|
39
|
+
format: WellPlateFormat
|
|
40
|
+
samples: QpcrSample[]
|
|
41
|
+
targets: QpcrTarget[]
|
|
42
|
+
reactions: QpcrReaction[]
|
|
43
|
+
instrument?: string
|
|
44
|
+
chemistry: QpcrChemistry
|
|
45
|
+
metadata: Record<string, unknown>
|
|
46
|
+
}
|
|
47
|
+
|
|
48
|
+
export type QpcrPlateTemplate = BioTemplateEnvelope<QpcrPlateTemplateData>
|
package/src/templates/types.ts
CHANGED
|
@@ -1,16 +1,11 @@
|
|
|
1
1
|
import type {
|
|
2
|
-
DataFrameColumn,
|
|
3
|
-
PlateCondition,
|
|
4
2
|
PlateMap,
|
|
5
|
-
PlateMapEditorState,
|
|
6
3
|
ProtocolStep,
|
|
7
4
|
Reagent,
|
|
8
|
-
ScheduleEvent,
|
|
9
5
|
SampleType,
|
|
10
|
-
SelectOption,
|
|
11
6
|
Well,
|
|
12
|
-
WellPlateFormat,
|
|
13
7
|
} from '../types'
|
|
8
|
+
import type { QpcrPlateTemplate } from './templateQpcrTypes'
|
|
14
9
|
|
|
15
10
|
export type TemplateKind = 'experiment-design'
|
|
16
11
|
export type TemplateId =
|
|
@@ -42,10 +37,6 @@ export type TemplatePackId =
|
|
|
42
37
|
| 'longitudinal-study'
|
|
43
38
|
| 'molecular-assay'
|
|
44
39
|
|
|
45
|
-
export interface CreateBioTemplatePackCollectionOptions {
|
|
46
|
-
metadata?: Record<string, unknown>
|
|
47
|
-
}
|
|
48
|
-
|
|
49
40
|
export interface BioTemplateEnvelope<TData = Record<string, unknown>> {
|
|
50
41
|
template_id: TemplateId | string
|
|
51
42
|
template_version: string
|
|
@@ -410,52 +401,6 @@ export type InstrumentRunTemplate = BioTemplateEnvelope<InstrumentRunTemplateDat
|
|
|
410
401
|
export type InstrumentMethodInput = Partial<InstrumentMethod> & { name?: string }
|
|
411
402
|
export type InstrumentRunItemInput = Partial<InstrumentRunItem> & { name?: string; sampleId?: string }
|
|
412
403
|
|
|
413
|
-
export type QpcrChemistry = 'sybr' | 'taqman' | 'probe' | 'evagreen' | 'other'
|
|
414
|
-
export type QpcrControlKind = 'sample' | 'no-template' | 'no-rt' | 'positive' | 'standard' | 'calibrator'
|
|
415
|
-
|
|
416
|
-
export interface QpcrSample {
|
|
417
|
-
sampleId: string
|
|
418
|
-
name?: string
|
|
419
|
-
group?: string
|
|
420
|
-
metadata?: Record<string, unknown>
|
|
421
|
-
}
|
|
422
|
-
|
|
423
|
-
export interface QpcrTarget {
|
|
424
|
-
id: string
|
|
425
|
-
name: string
|
|
426
|
-
assayId?: string
|
|
427
|
-
reporter?: string
|
|
428
|
-
quencher?: string
|
|
429
|
-
ampliconBp?: number
|
|
430
|
-
metadata?: Record<string, unknown>
|
|
431
|
-
}
|
|
432
|
-
|
|
433
|
-
export interface QpcrReaction {
|
|
434
|
-
id: string
|
|
435
|
-
wellId: string
|
|
436
|
-
sampleId?: string
|
|
437
|
-
targetId: string
|
|
438
|
-
replicate: number
|
|
439
|
-
controlKind: QpcrControlKind
|
|
440
|
-
cq?: number | null
|
|
441
|
-
quantity?: number | null
|
|
442
|
-
flags: string[]
|
|
443
|
-
metadata?: Record<string, unknown>
|
|
444
|
-
}
|
|
445
|
-
|
|
446
|
-
export interface QpcrPlateTemplateData {
|
|
447
|
-
plateId: string
|
|
448
|
-
format: WellPlateFormat
|
|
449
|
-
samples: QpcrSample[]
|
|
450
|
-
targets: QpcrTarget[]
|
|
451
|
-
reactions: QpcrReaction[]
|
|
452
|
-
instrument?: string
|
|
453
|
-
chemistry: QpcrChemistry
|
|
454
|
-
metadata: Record<string, unknown>
|
|
455
|
-
}
|
|
456
|
-
|
|
457
|
-
export type QpcrPlateTemplate = BioTemplateEnvelope<QpcrPlateTemplateData>
|
|
458
|
-
|
|
459
404
|
export type DataFrameTemplate =
|
|
460
405
|
| SampleSheetTemplate
|
|
461
406
|
| SamplePrepTemplate
|
|
@@ -468,222 +413,81 @@ export type DataFrameTemplate =
|
|
|
468
413
|
| InstrumentRunTemplate
|
|
469
414
|
| QpcrPlateTemplate
|
|
470
415
|
|
|
471
|
-
export
|
|
472
|
-
|
|
473
|
-
|
|
474
|
-
|
|
475
|
-
|
|
476
|
-
|
|
477
|
-
|
|
478
|
-
|
|
479
|
-
|
|
480
|
-
|
|
481
|
-
|
|
482
|
-
|
|
483
|
-
|
|
484
|
-
|
|
485
|
-
|
|
486
|
-
|
|
487
|
-
|
|
488
|
-
|
|
489
|
-
|
|
490
|
-
|
|
491
|
-
|
|
492
|
-
|
|
493
|
-
|
|
494
|
-
|
|
495
|
-
|
|
496
|
-
|
|
497
|
-
|
|
498
|
-
|
|
499
|
-
|
|
500
|
-
|
|
501
|
-
|
|
502
|
-
|
|
503
|
-
|
|
504
|
-
|
|
505
|
-
|
|
506
|
-
|
|
507
|
-
|
|
508
|
-
|
|
509
|
-
|
|
510
|
-
|
|
511
|
-
|
|
512
|
-
|
|
513
|
-
|
|
514
|
-
|
|
515
|
-
|
|
516
|
-
|
|
517
|
-
|
|
518
|
-
|
|
519
|
-
|
|
520
|
-
|
|
521
|
-
|
|
522
|
-
|
|
523
|
-
|
|
524
|
-
|
|
525
|
-
|
|
526
|
-
|
|
527
|
-
|
|
528
|
-
|
|
529
|
-
|
|
530
|
-
|
|
531
|
-
|
|
532
|
-
|
|
533
|
-
|
|
534
|
-
|
|
535
|
-
|
|
536
|
-
|
|
537
|
-
|
|
538
|
-
|
|
539
|
-
|
|
540
|
-
|
|
541
|
-
|
|
542
|
-
|
|
543
|
-
|
|
544
|
-
|
|
545
|
-
|
|
546
|
-
|
|
547
|
-
|
|
548
|
-
}
|
|
549
|
-
|
|
550
|
-
export interface CreateInstrumentRunTemplateOptions {
|
|
551
|
-
items: Array<string | InstrumentRunItemInput>
|
|
552
|
-
method?: string | InstrumentMethodInput
|
|
553
|
-
instrument?: string
|
|
554
|
-
includeBlanks?: boolean
|
|
555
|
-
includeQc?: boolean
|
|
556
|
-
metadata?: Record<string, unknown>
|
|
557
|
-
}
|
|
558
|
-
|
|
559
|
-
export interface CreateQpcrPlateTemplateOptions {
|
|
560
|
-
samples: Array<string | QpcrSample>
|
|
561
|
-
targets: Array<string | QpcrTarget>
|
|
562
|
-
format?: WellPlateFormat
|
|
563
|
-
replicates?: number
|
|
564
|
-
includeNoTemplateControls?: boolean
|
|
565
|
-
instrument?: string
|
|
566
|
-
chemistry?: QpcrChemistry
|
|
567
|
-
metadata?: Record<string, unknown>
|
|
568
|
-
}
|
|
569
|
-
|
|
570
|
-
export interface CreateWellPlateScreenCollectionOptions {
|
|
571
|
-
samples?: Array<string | SampleRecord>
|
|
572
|
-
compounds?: Record<string, number[]> | CompoundDoseSeries[]
|
|
573
|
-
unit?: string
|
|
574
|
-
replicates?: number
|
|
575
|
-
plateName?: string
|
|
576
|
-
plateFormat?: WellPlateFormat
|
|
577
|
-
metadata?: Record<string, unknown>
|
|
578
|
-
}
|
|
579
|
-
|
|
580
|
-
export interface CreateQpcrExpressionCollectionOptions {
|
|
581
|
-
samples?: Array<string | SampleRecord>
|
|
582
|
-
targets?: Array<string | QpcrTarget>
|
|
583
|
-
chemistry?: QpcrChemistry
|
|
584
|
-
includeNoTemplateControls?: boolean
|
|
585
|
-
format?: WellPlateFormat
|
|
586
|
-
replicates?: number
|
|
587
|
-
instrument?: string
|
|
588
|
-
metadata?: Record<string, unknown>
|
|
589
|
-
}
|
|
590
|
-
|
|
591
|
-
export interface CreateLcmsBatchCollectionOptions {
|
|
592
|
-
samples?: Array<string | SampleRecord>
|
|
593
|
-
features?: Array<string | AssayFeature>
|
|
594
|
-
instrument?: string
|
|
595
|
-
method?: string | InstrumentMethodInput
|
|
596
|
-
includeQc?: boolean
|
|
597
|
-
metadata?: Record<string, unknown>
|
|
598
|
-
}
|
|
599
|
-
|
|
600
|
-
export interface CreateTargetedMetabolomicsCollectionOptions {
|
|
601
|
-
samples?: Array<string | SampleRecord>
|
|
602
|
-
metabolites?: Array<string | AssayFeature>
|
|
603
|
-
internalStandards?: Array<string | ReagentTemplateInput>
|
|
604
|
-
standardConcentrations?: number[]
|
|
605
|
-
concentrationUnit?: string
|
|
606
|
-
responseUnit?: string
|
|
607
|
-
calibrationAnalyte?: string
|
|
608
|
-
instrument?: string
|
|
609
|
-
method?: string | InstrumentMethodInput
|
|
610
|
-
prepType?: SamplePrepStepType
|
|
611
|
-
outputVolume?: number
|
|
612
|
-
includeQc?: boolean
|
|
613
|
-
metadata?: Record<string, unknown>
|
|
614
|
-
}
|
|
615
|
-
|
|
616
|
-
export interface CreateElisaAssayCollectionOptions {
|
|
617
|
-
samples?: Array<string | SampleRecord>
|
|
618
|
-
analyte?: string
|
|
619
|
-
standardConcentrations?: number[]
|
|
620
|
-
unit?: string
|
|
621
|
-
responseUnit?: string
|
|
622
|
-
plateName?: string
|
|
623
|
-
plateFormat?: WellPlateFormat
|
|
624
|
-
metadata?: Record<string, unknown>
|
|
625
|
-
}
|
|
626
|
-
|
|
627
|
-
export interface CreateFlowCytometryAssayCollectionOptions {
|
|
628
|
-
samples?: Array<string | SampleRecord>
|
|
629
|
-
markers?: CreateFlowCytometryPanelTemplateOptions['markers']
|
|
630
|
-
features?: Array<string | AssayFeature>
|
|
631
|
-
instrument?: string
|
|
632
|
-
includeDefaultControls?: boolean
|
|
633
|
-
metadata?: Record<string, unknown>
|
|
634
|
-
}
|
|
635
|
-
|
|
636
|
-
export interface CreateWesternBlotAssayCollectionOptions {
|
|
637
|
-
samples?: Array<string | SampleRecord>
|
|
638
|
-
targets?: Array<string | AssayFeature>
|
|
639
|
-
loadingControl?: string
|
|
640
|
-
metadata?: Record<string, unknown>
|
|
641
|
-
}
|
|
642
|
-
|
|
643
|
-
export type PlateMapEditorAdapterResult = PlateMapEditorState
|
|
644
|
-
export type WellMapAdapterResult = Record<string, Well>
|
|
645
|
-
export type SampleRowsAdapterResult = Array<Record<string, unknown>>
|
|
646
|
-
export type SampleColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
647
|
-
export interface DataFrameAdapterResult {
|
|
648
|
-
data: Array<Record<string, unknown>>
|
|
649
|
-
columns: DataFrameColumn<Record<string, unknown>>[]
|
|
650
|
-
rowKey?: string
|
|
651
|
-
}
|
|
652
|
-
export type SampleDataFrameAdapterResult = DataFrameAdapterResult
|
|
653
|
-
export type SampleOptionsAdapterResult = SelectOption<string>[]
|
|
654
|
-
export type SamplePrepRowsAdapterResult = Array<Record<string, unknown>>
|
|
655
|
-
export type SamplePrepColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
656
|
-
export type SamplePrepDataFrameAdapterResult = DataFrameAdapterResult
|
|
657
|
-
export type DoseConditionsAdapterResult = PlateCondition[]
|
|
658
|
-
export type CalibrationCurveRowsAdapterResult = Array<Record<string, unknown>>
|
|
659
|
-
export type CalibrationCurveColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
660
|
-
export type CalibrationCurveDataFrameAdapterResult = DataFrameAdapterResult
|
|
661
|
-
export type TimeCourseRowsAdapterResult = Array<Record<string, unknown>>
|
|
662
|
-
export type TimeCourseColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
663
|
-
export type TimeCourseDataFrameAdapterResult = DataFrameAdapterResult
|
|
664
|
-
export type TimeCourseStepsAdapterResult = ProtocolStep[]
|
|
665
|
-
export type ProtocolStepsAdapterResult = ProtocolStep[]
|
|
666
|
-
export type ProtocolRowsAdapterResult = Array<Record<string, unknown>>
|
|
667
|
-
export type ProtocolColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
668
|
-
export type ProtocolDataFrameAdapterResult = DataFrameAdapterResult
|
|
669
|
-
export type AssayMatrixRowsAdapterResult = Array<Record<string, unknown>>
|
|
670
|
-
export type AssayMatrixColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
671
|
-
export type AssayMatrixDataFrameAdapterResult = DataFrameAdapterResult
|
|
672
|
-
export type AssayMatrixSampleOptionsAdapterResult = SelectOption<string>[]
|
|
673
|
-
export type ReagentListItemsAdapterResult = Reagent[]
|
|
674
|
-
export type ReagentRowsAdapterResult = Array<Record<string, unknown>>
|
|
675
|
-
export type ReagentColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
676
|
-
export type ReagentDataFrameAdapterResult = DataFrameAdapterResult
|
|
677
|
-
export type FlowPanelRowsAdapterResult = Array<Record<string, unknown>>
|
|
678
|
-
export type FlowPanelColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
679
|
-
export type FlowPanelDataFrameAdapterResult = DataFrameAdapterResult
|
|
680
|
-
export type InstrumentRunRowsAdapterResult = Array<Record<string, unknown>>
|
|
681
|
-
export type InstrumentRunColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
682
|
-
export type InstrumentRunDataFrameAdapterResult = DataFrameAdapterResult
|
|
683
|
-
export type InstrumentRunStepsAdapterResult = ProtocolStep[]
|
|
684
|
-
export type InstrumentRunScheduleEventsAdapterResult = ScheduleEvent[]
|
|
685
|
-
export type QpcrRowsAdapterResult = Array<Record<string, unknown>>
|
|
686
|
-
export type QpcrColumnsAdapterResult = DataFrameColumn<Record<string, unknown>>[]
|
|
687
|
-
export type QpcrDataFrameAdapterResult = DataFrameAdapterResult
|
|
688
|
-
export type QpcrWellMapAdapterResult = Record<string, Well>
|
|
689
|
-
export type TemplateDataFrameAdapterResult = DataFrameAdapterResult
|
|
416
|
+
export type {
|
|
417
|
+
QpcrChemistry,
|
|
418
|
+
QpcrControlKind,
|
|
419
|
+
QpcrPlateTemplate,
|
|
420
|
+
QpcrPlateTemplateData,
|
|
421
|
+
QpcrReaction,
|
|
422
|
+
QpcrSample,
|
|
423
|
+
QpcrTarget,
|
|
424
|
+
} from './templateQpcrTypes'
|
|
425
|
+
|
|
426
|
+
export type {
|
|
427
|
+
CreateAssayMatrixTemplateOptions,
|
|
428
|
+
CreateBioTemplatePackCollectionOptions,
|
|
429
|
+
CreateCalibrationCurveTemplateOptions,
|
|
430
|
+
CreateDoseResponseTemplateOptions,
|
|
431
|
+
CreateElisaAssayCollectionOptions,
|
|
432
|
+
CreateFlowCytometryAssayCollectionOptions,
|
|
433
|
+
CreateFlowCytometryPanelTemplateOptions,
|
|
434
|
+
CreateInstrumentRunTemplateOptions,
|
|
435
|
+
CreateLcmsBatchCollectionOptions,
|
|
436
|
+
CreatePlateMapTemplateOptions,
|
|
437
|
+
CreateProtocolStepsTemplateOptions,
|
|
438
|
+
CreateQpcrExpressionCollectionOptions,
|
|
439
|
+
CreateQpcrPlateTemplateOptions,
|
|
440
|
+
CreateReagentListTemplateOptions,
|
|
441
|
+
CreateSamplePrepTemplateOptions,
|
|
442
|
+
CreateSampleSheetTemplateOptions,
|
|
443
|
+
CreateTargetedMetabolomicsCollectionOptions,
|
|
444
|
+
CreateTimeCourseTemplateOptions,
|
|
445
|
+
CreateWellPlateScreenCollectionOptions,
|
|
446
|
+
CreateWesternBlotAssayCollectionOptions,
|
|
447
|
+
} from './templateCreateOptions'
|
|
448
|
+
|
|
449
|
+
export type {
|
|
450
|
+
AssayMatrixColumnsAdapterResult,
|
|
451
|
+
AssayMatrixDataFrameAdapterResult,
|
|
452
|
+
AssayMatrixRowsAdapterResult,
|
|
453
|
+
AssayMatrixSampleOptionsAdapterResult,
|
|
454
|
+
CalibrationCurveColumnsAdapterResult,
|
|
455
|
+
CalibrationCurveDataFrameAdapterResult,
|
|
456
|
+
CalibrationCurveRowsAdapterResult,
|
|
457
|
+
DataFrameAdapterResult,
|
|
458
|
+
DoseConditionsAdapterResult,
|
|
459
|
+
FlowPanelColumnsAdapterResult,
|
|
460
|
+
FlowPanelDataFrameAdapterResult,
|
|
461
|
+
FlowPanelRowsAdapterResult,
|
|
462
|
+
InstrumentRunColumnsAdapterResult,
|
|
463
|
+
InstrumentRunDataFrameAdapterResult,
|
|
464
|
+
InstrumentRunRowsAdapterResult,
|
|
465
|
+
InstrumentRunScheduleEventsAdapterResult,
|
|
466
|
+
InstrumentRunStepsAdapterResult,
|
|
467
|
+
PlateMapEditorAdapterResult,
|
|
468
|
+
ProtocolColumnsAdapterResult,
|
|
469
|
+
ProtocolDataFrameAdapterResult,
|
|
470
|
+
ProtocolRowsAdapterResult,
|
|
471
|
+
ProtocolStepsAdapterResult,
|
|
472
|
+
QpcrColumnsAdapterResult,
|
|
473
|
+
QpcrDataFrameAdapterResult,
|
|
474
|
+
QpcrRowsAdapterResult,
|
|
475
|
+
QpcrWellMapAdapterResult,
|
|
476
|
+
ReagentColumnsAdapterResult,
|
|
477
|
+
ReagentDataFrameAdapterResult,
|
|
478
|
+
ReagentListItemsAdapterResult,
|
|
479
|
+
ReagentRowsAdapterResult,
|
|
480
|
+
SampleColumnsAdapterResult,
|
|
481
|
+
SampleDataFrameAdapterResult,
|
|
482
|
+
SampleOptionsAdapterResult,
|
|
483
|
+
SamplePrepColumnsAdapterResult,
|
|
484
|
+
SamplePrepDataFrameAdapterResult,
|
|
485
|
+
SamplePrepRowsAdapterResult,
|
|
486
|
+
SampleRowsAdapterResult,
|
|
487
|
+
TemplateDataFrameAdapterResult,
|
|
488
|
+
TimeCourseColumnsAdapterResult,
|
|
489
|
+
TimeCourseDataFrameAdapterResult,
|
|
490
|
+
TimeCourseRowsAdapterResult,
|
|
491
|
+
TimeCourseStepsAdapterResult,
|
|
492
|
+
WellMapAdapterResult,
|
|
493
|
+
} from './templateAdapterTypes'
|