@monoes/monomindcli 2.9.23 → 2.9.24

package/dist/src/init/types.js.map

@@ -1 +1 @@
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package/dist/src/init/upgrade.d.ts.map

@@ -1 +1 @@
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package/dist/src/init/upgrade.js

@@ -1,13 +1,13 @@
 /**
  * Upgrade logic: executeUpgrade, executeUpgradeWithMissing, mergeSettingsForUpgrade.
  */
-import * as fs from 'fs';
-import * as path from 'path';
-import { DEFAULT_INIT_OPTIONS } from './types.js';
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import { FORCE_SYNC_GENERATORS, FORCE_SYNC_HELPERS } from './helpers-generator.js';
 import { generateSettings } from './settings-generator.js';
+import { AGENTS_MAP, atomicWriteFile, COMMANDS_MAP, copyDirRecursive, findSourceDir, findSourceHelpersDir, MAX_EXEC_FILE_BYTES, SKILLS_MAP, } from './shared.js';
 import { generateStatuslineScript } from './statusline-generator.js';
-import { FORCE_SYNC_HELPERS, FORCE_SYNC_GENERATORS, } from './helpers-generator.js';
-import { atomicWriteFile, copyDirRecursive, findSourceDir, findSourceHelpersDir, SKILLS_MAP, COMMANDS_MAP, AGENTS_MAP, MAX_EXEC_FILE_BYTES, } from './shared.js';
+import { DEFAULT_INIT_OPTIONS } from './types.js';
 /**
  * Merge new settings into existing settings.json
  * Preserves user customizations while adding new features like Agent Teams
@@ -30,15 +30,15 @@ function mergeSettingsForUpgrade(existing) {
     merged.hooks = { ...existingHooks };
     // Cross-platform auto-memory hook commands that resolve paths via git root.
     // Uses node -e with git rev-parse so hooks work regardless of CWD (#1259, #1284).
-    const gitRootResolver = "var c=require('child_process'),p=require('path'),u=require('url'),r;"
-        + "try{r=c.execSync('git rev-parse --show-toplevel',{encoding:'utf8'}).trim()}"
-        + 'catch(e){r=process.cwd()}';
+    const gitRootResolver = "var c=require('child_process'),p=require('path'),u=require('url'),r;" +
+        "try{r=c.execSync('git rev-parse --show-toplevel',{encoding:'utf8'}).trim()}" +
+        'catch(e){r=process.cwd()}';
     const autoMemoryScript = '.claude/helpers/auto-memory-hook.mjs';
     const autoMemoryImportCmd = `node -e "${gitRootResolver}var f=p.join(r,'${autoMemoryScript}');import(u.pathToFileURL(f).href)" import`;
     const autoMemorySyncCmd = `node -e "${gitRootResolver}var f=p.join(r,'${autoMemoryScript}');import(u.pathToFileURL(f).href)" sync`;
     // Add auto-memory import to SessionStart (if not already present)
     const sessionStartHooks = existingHooks.SessionStart;
-    const hasAutoMemoryImport = sessionStartHooks?.some(group => group.hooks?.some(h => h.command?.includes('auto-memory-hook')));
+    const hasAutoMemoryImport = sessionStartHooks?.some((group) => group.hooks?.some((h) => h.command?.includes('auto-memory-hook')));
     if (!hasAutoMemoryImport) {
         const startHooks = merged.hooks;
         if (!startHooks.SessionStart) {
@@ -56,7 +56,7 @@ function mergeSettingsForUpgrade(existing) {
     }
     // Add auto-memory sync to SessionEnd (if not already present)
     const sessionEndHooks = existingHooks.SessionEnd;
-    const hasAutoMemorySync = sessionEndHooks?.some(group => group.hooks?.some(h => h.command?.includes('auto-memory-hook')));
+    const hasAutoMemorySync = sessionEndHooks?.some((group) => group.hooks?.some((h) => h.command?.includes('auto-memory-hook')));
     if (!hasAutoMemorySync) {
         const endHooks = merged.hooks;
         if (!endHooks.SessionEnd) {
@@ -85,7 +85,8 @@ function mergeSettingsForUpgrade(existing) {
     if (existingStatusLine) {
         merged.statusLine = {
             type: 'command',
-            command: existingStatusLine.command || `node -e "var c=require('child_process'),p=require('path'),r;try{r=c.execSync('git rev-parse --show-toplevel',{encoding:'utf8'}).trim()}catch(e){r=process.cwd()}var s=p.join(r,'.claude/helpers/statusline.cjs');process.argv.splice(1,0,s);require(s)"`,
+            command: existingStatusLine.command ||
+                `node -e "var c=require('child_process'),p=require('path'),r;try{r=c.execSync('git rev-parse --show-toplevel',{encoding:'utf8'}).trim()}catch(e){r=process.cwd()}var s=p.join(r,'.claude/helpers/statusline.cjs');process.argv.splice(1,0,s);require(s)"`,
             // Remove invalid fields: refreshMs, enabled (not supported by Claude Code)
         };
     }
@@ -172,7 +173,7 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                         result.created.push(`.claude/helpers/${helperName}`);
                     }
                     // Atomic copy-via-rename so a partial write can't leave a broken hook
-                    const tmp = targetPath + '.tmp';
+                    const tmp = `${targetPath}.tmp`;
                     fs.copyFileSync(sourcePath, tmp);
                     try {
                         fs.chmodSync(tmp, 0o755);
@@ -229,7 +230,8 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
         }
         // 1. Statusline fallback — only generate if source copy above didn't cover it
         const statuslinePath = path.join(targetDir, '.claude', 'helpers', 'statusline.cjs');
-        if (!sourceHelpersForUpgrade || !fs.existsSync(path.join(sourceHelpersForUpgrade, 'statusline.cjs'))) {
+        if (!sourceHelpersForUpgrade ||
+            !fs.existsSync(path.join(sourceHelpersForUpgrade, 'statusline.cjs'))) {
             const upgradeOptions = {
                 ...DEFAULT_INIT_OPTIONS,
                 targetDir,
@@ -261,7 +263,7 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                 ddd: { progress: 0, modules: 0, totalFiles: 0, totalLines: 0 },
                 swarm: { activeAgents: 0, maxAgents: 15, topology: 'hierarchical-mesh' },
                 learning: { status: 'READY', patternsLearned: 0, sessionsCompleted: 0 },
-                _note: 'Metrics will update as you use Monomind'
+                _note: 'Metrics will update as you use Monomind',
             };
             atomicWriteFile(progressPath, JSON.stringify(progress, null, 2));
             result.created.push('.monomind/metrics/v1-progress.json');
@@ -277,7 +279,7 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                 processes: { mcp_server: 0, estimated_agents: 0 },
                 monoswarm: { active: false, agent_count: 0, coordination_active: false },
                 integration: { mcp_active: false },
-                _initialized: true
+                _initialized: true,
             };
             atomicWriteFile(activityPath, JSON.stringify(activity, null, 2));
             result.created.push('.monomind/metrics/monoswarm-activity.json');
@@ -293,7 +295,7 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                 routing: { accuracy: 0, decisions: 0 },
                 patterns: { shortTerm: 0, longTerm: 0, quality: 0 },
                 sessions: { total: 0, current: null },
-                _note: 'Intelligence grows as you use Monomind'
+                _note: 'Intelligence grows as you use Monomind',
             };
             atomicWriteFile(learningPath, JSON.stringify(learning, null, 2));
             result.created.push('.monomind/metrics/learning.json');
@@ -310,7 +312,7 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                 cvesFixed: 0,
                 totalCves: 3,
                 lastScan: null,
-                _note: 'Run: npx monomind@latest security scan'
+                _note: 'Run: npx monomind@latest security scan',
             };
             atomicWriteFile(auditPath, JSON.stringify(audit, null, 2));
             result.created.push('.monomind/security/audit-status.json');

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package/dist/src/init/write-antigravity.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"write-antigravity.d.ts","sourceRoot":"","sources":["../../../src/init/write-antigravity.ts"],"names":[],"mappings":"AAAA;;GAEG;AAIH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAQ1D;;;;;;GAMG;AACH,wBAAsB,gBAAgB,CACpC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA0Ff"}
+{"version":3,"file":"write-antigravity.d.ts","sourceRoot":"","sources":["../../../src/init/write-antigravity.ts"],"names":[],"mappings":"AAAA;;GAEG;AAUH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAE1D;;;;;;GAMG;AACH,wBAAsB,gBAAgB,CACpC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA8Gf"}

package/dist/src/init/write-antigravity.js

@@ -1,8 +1,8 @@
 /**
  * Antigravity (agy) / Gemini integration file writers.
  */
-import * as fs from 'fs';
-import * as path from 'path';
+import * as fs from 'node:fs';
+import * as path from 'node:path';
 import { generateGeminiMd, generateGeminiRulesMd, generateStatuslineSh, } from './geminimd-generator.js';
 import { atomicWriteFile, MAX_EXEC_FILE_BYTES } from './shared.js';
 /**
@@ -42,7 +42,9 @@ export async function writeGeminiFiles(targetDir, options, result) {
         try {
             fs.chmodSync(statuslineShPath, 0o755);
         }
-        catch { /* ignore on Windows */ }
+        catch {
+            /* ignore on Windows */
+        }
         result.created.files.push('.gemini/helpers/statusline.sh');
     }
     else {
@@ -53,7 +55,8 @@ export async function writeGeminiFiles(targetDir, options, result) {
     const geminiSettingsPath = path.join(targetDir, '.gemini', 'settings.json');
     try {
         let existing = {};
-        if (fs.existsSync(geminiSettingsPath) && fs.statSync(geminiSettingsPath).size <= MAX_EXEC_FILE_BYTES) {
+        if (fs.existsSync(geminiSettingsPath) &&
+            fs.statSync(geminiSettingsPath).size <= MAX_EXEC_FILE_BYTES) {
             existing = JSON.parse(fs.readFileSync(geminiSettingsPath, 'utf-8'));
         }
         if (!existing.statusLine) {
@@ -85,16 +88,21 @@ export async function writeGeminiFiles(targetDir, options, result) {
                     try {
                         fs.chmodSync(globalStatuslineSh, 0o755);
                     }
-                    catch { /* ignore */ }
+                    catch {
+                        /* ignore */
+                    }
                     result.created.files.push('~/.gemini/antigravity-cli/statusline.sh');
                 }
                 // Inject statusLine into global agy settings without clobbering existing keys
                 let globalSettings = {};
-                if (fs.existsSync(globalAgySettings) && fs.statSync(globalAgySettings).size <= MAX_EXEC_FILE_BYTES) {
+                if (fs.existsSync(globalAgySettings) &&
+                    fs.statSync(globalAgySettings).size <= MAX_EXEC_FILE_BYTES) {
                     try {
                         globalSettings = JSON.parse(fs.readFileSync(globalAgySettings, 'utf-8'));
                     }
-                    catch { /* reset */ }
+                    catch {
+                        /* reset */
+                    }
                 }
                 if (!globalSettings.statusLine) {
                     globalSettings.statusLine = {

package/dist/src/init/write-antigravity.js.map

@@ -1 +1 @@
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package/dist/src/init/write-capabilities.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"write-capabilities.d.ts","sourceRoot":"","sources":["../../../src/init/write-capabilities.ts"],"names":[],"mappings":"AAAA;;GAEG;AAIH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAG1D;;GAEG;AACH,wBAAsB,oBAAoB,CACxC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAoXf"}
+{"version":3,"file":"write-capabilities.d.ts","sourceRoot":"","sources":["../../../src/init/write-capabilities.ts"],"names":[],"mappings":"AAAA;;GAEG;AAKH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAE1D;;GAEG;AACH,wBAAsB,oBAAoB,CACxC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAoXf"}

package/dist/src/init/write-capabilities.js

@@ -1,9 +1,9 @@
 /**
  * CAPABILITIES.md writer — comprehensive overview of all Monomind features.
  */
-import * as fs from 'fs';
-import * as path from 'path';
-import { atomicWriteFile, _isOptionalPackageResolvable } from './shared.js';
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import { _isOptionalPackageResolvable, atomicWriteFile } from './shared.js';
 /**
  * Write CAPABILITIES.md - comprehensive overview of all Monomind features
  */

package/dist/src/init/write-capabilities.js.map

@@ -1 +1 @@
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+{"version":3,"file":"write-capabilities.js","sourceRoot":"","sources":["../../../src/init/write-capabilities.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,KAAK,EAAE,MAAM,SAAS,CAAC;AAC9B,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAClC,OAAO,EAAE,4BAA4B,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAG5E;;GAEG;AACH,MAAM,CAAC,KAAK,UAAU,oBAAoB,CACxC,SAAiB,EACjB,OAAoB,EACpB,MAAkB;IAElB,MAAM,gBAAgB,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,WAAW,EAAE,iBAAiB,CAAC,CAAC;IAE9E,IAAI,EAAE,CAAC,UAAU,CAAC,gBAAgB,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,EAAE,CAAC;QACtD,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;QACjD,OAAO;IACT,CAAC;IAED,MAAM,cAAc,GAAG,4BAA4B,CAAC,eAAe,CAAC,CAAC;IAErE,MAAM,YAAY,GAAG;eACR,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;eA8BxB,OAAO,CAAC,OAAO,CAAC,QAAQ;iBACtB,OAAO,CAAC,OAAO,CAAC,SAAS;qBACrB,OAAO,CAAC,OAAO,CAAC,aAAa;sBAC5B,OAAO,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,UAAU;eAC5D,OAAO,CAAC,OAAO,CAAC,oBAAoB,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,UAAU;mBACzD,OAAO,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAC,8BAA8B,CAAC,CAAC,CAAC,UAAU;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;+DAuFnC,cAAc,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,mDAAmD;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;mCAmCrG,cAAc,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,mFAAmF;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;mBA0EzH,OAAO,CAAC,OAAO,CAAC,oBAAoB,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,YAAY;2BACzD,OAAO,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,YAAY;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA6HxF,CAAC;IAEA,eAAe,CAAC,gBAAgB,EAAE,YAAY,CAAC,CAAC;IAChD,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;AACzD,CAAC"}

package/dist/src/init/write-claude.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"write-claude.d.ts","sourceRoot":"","sources":["../../../src/init/write-claude.ts"],"names":[],"mappings":"AAAA;;GAEG;AAIH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAe1D;;GAEG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAoDf;AAED;;GAEG;AACH,wBAAsB,cAAc,CAClC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAWf;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAuEf;AAED;;GAEG;AACH,wBAAsB,eAAe,CACnC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA0Cf;AAED;;GAEG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA8Ff"}
+{"version":3,"file":"write-claude.d.ts","sourceRoot":"","sources":["../../../src/init/write-claude.ts"],"names":[],"mappings":"AAAA;;GAEG;AAeH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAE1D;;GAEG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA4Df;AAED;;GAEG;AACH,wBAAsB,cAAc,CAClC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAWf;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAuEf;AAED;;GAEG;AACH,wBAAsB,eAAe,CACnC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA0Cf;AAED;;GAEG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAkHf"}

package/dist/src/init/write-claude.js

@@ -1,21 +1,23 @@
 /**
  * Claude Code file writers: settings.json, .mcp.json, helpers, statusline, CLAUDE.md.
  */
-import * as fs from 'fs';
-import * as path from 'path';
-import { generateSettingsJson } from './settings-generator.js';
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import { generateClaudeMd } from './claudemd-generator.js';
+import { INIT_FALLBACK_HELPERS } from './helpers-generator.js';
 import { generateMCPJson } from './mcp-generator.js';
+import { generateSettingsJson } from './settings-generator.js';
+import { atomicWriteFile, findSourceClaudeDir, findSourceHelpersDir, MAX_EXEC_FILE_BYTES, } from './shared.js';
 import { generateStatuslineScript } from './statusline-generator.js';
-import { INIT_FALLBACK_HELPERS, } from './helpers-generator.js';
-import { generateClaudeMd } from './claudemd-generator.js';
-import { atomicWriteFile, findSourceHelpersDir, findSourceClaudeDir, MAX_EXEC_FILE_BYTES, } from './shared.js';
 /**
  * Write settings.json
  */
 export async function writeSettings(targetDir, options, result) {
     const settingsPath = path.join(targetDir, '.claude', 'settings.json');
     const generated = JSON.parse(generateSettingsJson(options));
-    if (fs.existsSync(settingsPath) && !options.force && fs.statSync(settingsPath).size <= MAX_EXEC_FILE_BYTES) {
+    if (fs.existsSync(settingsPath) &&
+        !options.force &&
+        fs.statSync(settingsPath).size <= MAX_EXEC_FILE_BYTES) {
         // Merge hooks/env/permissions into existing settings instead of skipping
         try {
             const existing = JSON.parse(fs.readFileSync(settingsPath, 'utf-8'));
@@ -191,7 +193,7 @@ export async function writeClaudeMd(targetDir, options, result) {
     }
     else {
         // Determine template: explicit option > infer from components > 'standard'
-        const inferredTemplate = (!options.components.commands && !options.components.agents) ? 'minimal' : undefined;
+        const inferredTemplate = !options.components.commands && !options.components.agents ? 'minimal' : undefined;
         const content = generateClaudeMd(options, inferredTemplate);
         atomicWriteFile(claudeMdPath, content);
         result.created.files.push('CLAUDE.md');
@@ -214,7 +216,8 @@ export async function writeClaudeMd(targetDir, options, result) {
             if (!fs.existsSync(globalClaudeDir)) {
                 fs.mkdirSync(globalClaudeDir, { recursive: true });
             }
-            if (fs.existsSync(globalClaudeMd) && fs.statSync(globalClaudeMd).size <= MAX_EXEC_FILE_BYTES) {
+            if (fs.existsSync(globalClaudeMd) &&
+                fs.statSync(globalClaudeMd).size <= MAX_EXEC_FILE_BYTES) {
                 const existing = fs.readFileSync(globalClaudeMd, 'utf-8');
                 if (!existing.includes('Monomind Integration')) {
                     fs.appendFileSync(globalClaudeMd, monomindBlock);
@@ -222,7 +225,7 @@ export async function writeClaudeMd(targetDir, options, result) {
                 }
                 else if (!existing.includes('monograph_query')) {
                     // Upgrade existing block to include monograph instructions
-                    const updated = existing.replace(/# Monomind Integration[^\n]*\n(?:(?!^#).+\n)*/m, monomindBlock.trimStart() + '\n');
+                    const updated = existing.replace(/# Monomind Integration[^\n]*\n(?:(?!^#).+\n)*/m, `${monomindBlock.trimStart()}\n`);
                     atomicWriteFile(globalClaudeMd, updated);
                     result.created.files.push('~/.claude/CLAUDE.md (upgraded monomind block)');
                 }
@@ -244,7 +247,8 @@ export async function writeClaudeMd(targetDir, options, result) {
                 fs.mkdirSync(globalClaudeDir, { recursive: true });
             }
             let globalSettings = {};
-            if (fs.existsSync(globalSettingsPath) && fs.statSync(globalSettingsPath).size <= MAX_EXEC_FILE_BYTES) {
+            if (fs.existsSync(globalSettingsPath) &&
+                fs.statSync(globalSettingsPath).size <= MAX_EXEC_FILE_BYTES) {
                 try {
                     globalSettings = JSON.parse(fs.readFileSync(globalSettingsPath, 'utf-8'));
                 }
@@ -256,14 +260,14 @@ export async function writeClaudeMd(targetDir, options, result) {
             }
             // Inject SessionStart token hook if not already present
             const hooks = globalSettings.hooks ?? {};
-            const sessionStartHooks = hooks['SessionStart'] ?? [];
+            const sessionStartHooks = hooks.SessionStart ?? [];
             const tokenHookCommand = 'npx --yes monomind@latest tokens today';
-            const alreadyPresent = sessionStartHooks.some(entry => Array.isArray(entry.hooks) && entry.hooks.some(h => h.command === tokenHookCommand));
+            const alreadyPresent = sessionStartHooks.some((entry) => Array.isArray(entry.hooks) && entry.hooks.some((h) => h.command === tokenHookCommand));
             if (!alreadyPresent) {
                 sessionStartHooks.push({
                     hooks: [{ type: 'command', command: tokenHookCommand, timeout: 10000 }],
                 });
-                hooks['SessionStart'] = sessionStartHooks;
+                hooks.SessionStart = sessionStartHooks;
                 globalSettings.hooks = hooks;
                 atomicWriteFile(globalSettingsPath, JSON.stringify(globalSettings, null, 2));
                 result.created.files.push('~/.claude/settings.json (added token hook)');

package/dist/src/init/write-claude.js.map

@@ -1 +1 @@
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package/dist/src/init/write-codex.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"write-codex.d.ts","sourceRoot":"","sources":["../../../src/init/write-codex.ts"],"names":[],"mappings":"AAAA,qCAAqC;AAMrC,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAqB1D,wBAAsB,eAAe,CACnC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA4Bf"}
+{"version":3,"file":"write-codex.d.ts","sourceRoot":"","sources":["../../../src/init/write-codex.ts"],"names":[],"mappings":"AAAA,qCAAqC;AAarC,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAuE1D,wBAAsB,eAAe,CACnC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA6Cf"}

package/dist/src/init/write-codex.js

@@ -1,17 +1,64 @@
 /** Codex project artifact writer. */
 import * as fs from 'node:fs';
 import * as path from 'node:path';
-import { generateCodexAgentsMd, generateCodexConfig } from './codex-generator.js';
+import { CODEX_STATUS_LINE_ITEMS, generateCodexAgentsMd, generateCodexConfig, generateCodexHookScript, generateCodexHooksConfig, generateCodexStatusLineConfig, } from './codex-generator.js';
 import { atomicWriteFile } from './shared.js';
+function mergeCodexHooks(existing) {
+    const hooksConfig = generateCodexHooksConfig().trimEnd();
+    const hookBlock = /# monomind:start native-hooks[\s\S]*?# monomind:end native-hooks\n?/m;
+    let mergedExisting = existing;
+    if (hookBlock.test(mergedExisting)) {
+        mergedExisting = mergedExisting.replace(hookBlock, `${hooksConfig}\n`);
+    }
+    else {
+        mergedExisting = `${mergedExisting.trimEnd()}\n\n${hooksConfig}\n`;
+    }
+    if (!/^\[features\]\s*$/m.test(mergedExisting)) {
+        mergedExisting = `[features]\nhooks = true\n\n${mergedExisting}`;
+    }
+    else if (!/^hooks\s*=\s*true\s*$/m.test(mergedExisting)) {
+        const featureLines = mergedExisting.split(/\r?\n/);
+        const featureStart = featureLines.findIndex((line) => /^\[features\]\s*$/.test(line));
+        let featureEnd = featureStart + 1;
+        while (featureEnd < featureLines.length && !/^\[/.test(featureLines[featureEnd]))
+            featureEnd++;
+        featureLines.splice(featureEnd, 0, 'hooks = true');
+        mergedExisting = featureLines.join('\n');
+    }
+    return mergedExisting;
+}
 function mergeCodexConfig(existing, generated) {
-    const section = generated.match(/^\[mcp_servers\.monomind\][\s\S]*$/m)?.[0] ?? '';
+    const generatedLines = generated.split(/\r?\n/);
+    const generatedStart = generatedLines.findIndex((line) => /^\[mcp_servers\.monomind\]\s*$/.test(line));
+    let generatedEnd = generatedStart + 1;
+    while (generatedEnd < generatedLines.length && !/^\[/.test(generatedLines[generatedEnd])) {
+        generatedEnd++;
+    }
+    const section = generatedStart === -1 ? '' : generatedLines.slice(generatedStart, generatedEnd).join('\n');
+    const statusLine = generateCodexStatusLineConfig().trimEnd();
+    let mergedExisting = mergeCodexHooks(existing);
+    if (!/^\s*status_line\s*=/m.test(existing)) {
+        const tuiHeader = /^\[tui\]\s*$/m;
+        if (tuiHeader.test(existing)) {
+            const lines = existing.split(/\r?\n/);
+            const start = lines.findIndex((line) => /^\[tui\]\s*$/.test(line));
+            let end = start + 1;
+            while (end < lines.length && !/^\[\[?[^\]]+\]\]?\s*$/.test(lines[end]))
+                end++;
+            lines.splice(end, 0, `status_line = [${CODEX_STATUS_LINE_ITEMS.map((item) => JSON.stringify(item)).join(', ')}]`);
+            mergedExisting = lines.join('\n');
+        }
+        else {
+            mergedExisting = `${existing.trimEnd()}\n\n${statusLine}\n`;
+        }
+    }
     if (!section)
-        return existing;
+        return mergedExisting;
     const sectionStart = /^\[mcp_servers\.monomind\]\s*$/m;
-    if (!sectionStart.test(existing)) {
-        return `${existing.trimEnd()}\n\n${section.trimEnd()}\n`;
+    if (!sectionStart.test(mergedExisting)) {
+        return `${mergedExisting.trimEnd()}\n\n${section.trimEnd()}\n`;
     }
-    const lines = existing.split(/\r?\n/);
+    const lines = mergedExisting.split(/\r?\n/);
     const start = lines.findIndex((line) => /^\[mcp_servers\.monomind\]\s*$/.test(line));
     let end = start + 1;
     while (end < lines.length) {
@@ -27,6 +74,16 @@ export async function writeCodexFiles(targetDir, options, result) {
     const codexDir = path.join(targetDir, '.codex');
     const configPath = path.join(codexDir, 'config.toml');
     fs.mkdirSync(codexDir, { recursive: true });
+    const hooksDir = path.join(codexDir, 'hooks');
+    const hookPath = path.join(hooksDir, 'monomind-hook.cjs');
+    fs.mkdirSync(hooksDir, { recursive: true });
+    if (!fs.existsSync(hookPath) || options.force) {
+        atomicWriteFile(hookPath, generateCodexHookScript());
+        result.created.files.push('.codex/hooks/monomind-hook.cjs');
+    }
+    else {
+        result.skipped.push('.codex/hooks/monomind-hook.cjs');
+    }
     if (!fs.existsSync(configPath)) {
         atomicWriteFile(configPath, generateCodexConfig(options));
         result.created.files.push('.codex/config.toml');
@@ -43,7 +100,15 @@ export async function writeCodexFiles(targetDir, options, result) {
         }
     }
     else {
-        result.skipped.push('.codex/config.toml');
+        const current = fs.readFileSync(configPath, 'utf8');
+        const mergedHooks = mergeCodexHooks(current);
+        if (mergedHooks !== current) {
+            atomicWriteFile(configPath, mergedHooks);
+            result.updated.push('.codex/config.toml (native hooks)');
+        }
+        else {
+            result.skipped.push('.codex/config.toml');
+        }
     }
     const agentsPath = path.join(targetDir, 'AGENTS.md');
     if (!fs.existsSync(agentsPath)) {