@monoes/monomindcli 2.10.31 → 2.11.0

package/dist/src/init/helpers-generator.js

@@ -456,7 +456,7 @@ export function generateHookHandler() {
         "      output.push('| Reason: ' + result.reason.substring(0, 53).padEnd(53) + '|');",
         "      output.push('+--------------------------------------------------------------+');",
         "      console.log(output.join('\\n'));",
-        '      // Graphify knowledge graph suggestion for architecture/understanding tasks',
+        '      // Monograph knowledge graph suggestion for architecture/understanding tasks',
         '      try {',
         "        var archKeywords = ['understand', 'architecture', 'how does', 'what calls', 'dependency', 'depends on', 'flow', 'how is', 'explain codebase', 'project structure', 'what is the relationship', 'graph', 'knowledge'];",
         '        var promptLower = prompt.toLowerCase();',
@@ -1290,7 +1290,7 @@ export const HELPER_FILES = {
     'intelligence.cjs': { forceSync: true, generate: generateIntelligenceStub },
     'auto-memory-hook.mjs': { forceSync: true, generate: generateAutoMemoryHook },
     'statusline.cjs': { forceSync: true, doctorTracked: true },
-    'graphify-freshen.cjs': { forceSync: true, doctorTracked: true },
+    'monograph-freshen.cjs': { forceSync: true, doctorTracked: true },
     'control-start.cjs': { forceSync: true, doctorTracked: true },
     'router.cjs': { forceSync: true, doctorTracked: true, generate: generateAgentRouter },
     // Regenerates skill-registry.json (which router.cjs's matchSkills reads) from
@@ -1305,6 +1305,15 @@ export const HELPER_FILES = {
 };
 export const FORCE_SYNC_HELPERS = Object.keys(HELPER_FILES).filter((name) => HELPER_FILES[name].forceSync);
 export const DOCTOR_TRACKED_HELPERS = Object.keys(HELPER_FILES).filter((name) => HELPER_FILES[name].doctorTracked);
+// Helper file names this product shipped in the past under a name it no
+// longer uses (e.g. before a rename). Deliberately absent from HELPER_FILES —
+// nothing should still be writing these — so `init --force` and `doctor`
+// track them separately: `doctor` warns a project still has one on disk and
+// points at `init --force`, which deletes it once settings.json has been
+// regenerated to stop referencing it.
+export const OBSOLETE_HELPER_NAMES = [
+    'graphify-freshen.cjs', // renamed to monograph-freshen.cjs (2026-09-16)
+];
 // Fallback generators for force-synced helpers (used when source is missing
 // the file entirely). Previously duplicated by hand as two separate maps
 // that disagreed on membership — the "source found but file missing" path

package/dist/src/init/helpers-generator.js.map

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package/dist/src/init/settings-generator.js

@@ -11,7 +11,7 @@ export function generateSettings(options) {
     const settings = {};
     // Add hooks if enabled
     if (options.components.settings) {
-        settings.hooks = generateHooksConfig(options.hooks, options.components.graphify);
+        settings.hooks = generateHooksConfig(options.hooks, options.components.monograph);
     }
     // Add statusLine configuration if enabled
     if (options.statusline.enabled) {
@@ -198,7 +198,7 @@ function generateStatusLineConfig(_options) {
  * All hooks invoke scripts directly via `node <script> <subcommand>`,
  * working identically on Windows, macOS, and Linux.
  */
-function generateHooksConfig(config, graphify = true) {
+function generateHooksConfig(config, monograph = true) {
     const hooks = {};
     // Node.js scripts handle errors internally via try/catch.
     // No shell-level error suppression needed (2>/dev/null || true breaks Windows).
@@ -317,10 +317,10 @@ function generateHooksConfig(config, graphify = true) {
                 timeout: 8000,
             },
         ];
-        if (graphify) {
+        if (monograph) {
             sessionStartHooks.push({
                 type: 'command',
-                command: standaloneHelperCmd('graphify-freshen.cjs'),
+                command: standaloneHelperCmd('monograph-freshen.cjs'),
                 timeout: 5000,
             });
         }

package/dist/src/init/settings-generator.js.map

@@ -1 +1 @@
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package/dist/src/init/statusline-generator.js

@@ -1020,7 +1020,7 @@ function getHILPending() {
 //   1. .monomind/graph/stats.json     — explicit cached stats
 //   2. .monomind/monograph.db         — live SQLite (read counts via sqlite3)
 //   3. .monomind/graph/graph.json     — legacy JSON dump
-function getGraphifyStats() {
+function getMonographStats() {
   const statsPath = path.join(CWD, '.monomind', 'graph', 'stats.json');
   const dbPath    = path.join(CWD, '.monomind', 'monograph.db');
   const graphPath = path.join(CWD, '.monomind', 'graph', 'graph.json');
@@ -1061,7 +1061,7 @@ function getGraphStaleness() {
   if (!fs.existsSync(dbPath)) return null;
   try {
     // Pull the last indexed commit out of index_meta via sqlite3 (same
-    // shell-out convention getGraphifyStats uses for node/edge counts).
+    // shell-out convention getMonographStats uses for node/edge counts).
     const lastCommit = safeExec(\`sqlite3 "\${dbPath}" "SELECT value FROM index_meta WHERE key = 'last_commit_hash' OR key = 'lastCommit' LIMIT 1;"\`, 1000);
     if (!lastCommit || !/^[0-9a-f]{7,40}$/i.test(lastCommit.trim())) return null;
     const out = safeExec(\`git rev-list --count \${lastCommit.trim()}..HEAD\`, 1500);
@@ -1133,7 +1133,7 @@ function generateStatusline() {
   // V4: graph staleness — visible warning when the monograph is behind HEAD.
   // Silent staleness is the most dangerous failure mode (the user trusts a
   // stale answer), so surface commits-behind on the statusline itself.
-  const graph = getGraphifyStats();
+  const graph = getMonographStats();
   if (graph.exists && graph.nodes > 0) {
     const stale = getGraphStaleness();
     if (stale && stale.commitsBehind > 0) {
@@ -1300,7 +1300,7 @@ function generateDashboard() {
   lines.push(SEP);
 
   // ── Row 2: Graph freshness + Pending HIL ─────────────────────
-  const gf = getGraphifyStats();
+  const gf = getMonographStats();
   const freshness = getGraphFreshness();
   let graphStr;
   if (gf.exists) {

package/dist/src/init/types.d.ts

@@ -25,7 +25,7 @@ export interface InitComponents {
     /** Create CLAUDE.md with swarm guidance */
     claudeMd: boolean;
     /** Build knowledge graph on init using monograph (TypeScript) */
-    graphify: boolean;
+    monograph: boolean;
     /** Emit Antigravity (Gemini) artifacts. */
     antigravity: boolean;
     /** Emit opencode artifacts (opencode.json + .opencode/). Opt-in — default
@@ -180,7 +180,7 @@ export interface MCPConfig {
     /** Include monomind MCP server */
     monomind: boolean;
     /** Include monograph knowledge graph MCP server */
-    graphify: boolean;
+    monograph: boolean;
     /** Auto-start MCP server */
     autoStart: boolean;
     /** Server port */

package/dist/src/init/types.d.ts.map

@@ -1 +1 @@
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package/dist/src/init/types.js

@@ -60,7 +60,7 @@ export const DEFAULT_INIT_OPTIONS = {
         mcp: true,
         runtime: true,
         claudeMd: true,
-        graphify: true,
+        monograph: true,
         antigravity: true,
         opencode: false,
         kimicode: false,
@@ -117,7 +117,7 @@ export const DEFAULT_INIT_OPTIONS = {
     },
     mcp: {
         monomind: true,
-        graphify: false,
+        monograph: false,
         autoStart: false,
         port: 3000,
     },
@@ -154,7 +154,7 @@ export const MINIMAL_INIT_OPTIONS = {
         mcp: true,
         runtime: true,
         claudeMd: true,
-        graphify: false,
+        monograph: false,
         antigravity: false,
         opencode: false,
         kimicode: false,
@@ -218,7 +218,7 @@ export const FULL_INIT_OPTIONS = {
         mcp: true,
         runtime: true,
         claudeMd: true,
-        graphify: true,
+        monograph: true,
         antigravity: true,
         opencode: false,
         kimicode: false,
@@ -242,7 +242,7 @@ export const FULL_INIT_OPTIONS = {
     },
     mcp: {
         monomind: true,
-        graphify: false,
+        monograph: false,
         autoStart: false,
         port: 3000,
     },

package/dist/src/init/types.js.map

@@ -1 +1 @@
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package/dist/src/init/write-claude.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"write-claude.d.ts","sourceRoot":"","sources":["../../../src/init/write-claude.ts"],"names":[],"mappings":"AAAA;;GAEG;AAgBH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAe1D;;GAEG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA6Ef;AA+JD;;GAEG;AACH,wBAAsB,cAAc,CAClC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAWf;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA+Ff;AAED;;GAEG;AACH,wBAAsB,eAAe,CACnC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA0Cf;AAED;;GAEG;AAEH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAuBf"}

package/dist/src/init/write-claude.js

@@ -4,7 +4,7 @@
 import * as fs from 'node:fs';
 import * as path from 'node:path';
 import { generateClaudeMd } from './claudemd-generator.js';
-import { INIT_FALLBACK_HELPERS } from './helpers-generator.js';
+import { INIT_FALLBACK_HELPERS, OBSOLETE_HELPER_NAMES } from './helpers-generator.js';
 import { generateMCPJson } from './mcp-generator.js';
 import { generateSettingsJson } from './settings-generator.js';
 import { atomicWriteFile, findSourceClaudeDir, findSourceHelpersDir, MAX_EXEC_FILE_BYTES, mergeGeneratedBlock, } from './shared.js';
@@ -31,7 +31,13 @@ export async function writeSettings(targetDir, options, result) {
             // behavior (backfill only when hooks are completely absent) is
             // unchanged.
             if (options.force && generated.hooks) {
-                existing.hooks = mergeHooksPreservingUnknown(existing.hooks, generated.hooks);
+                // mergeHooksPreservingUnknown matches by exact command string (see its
+                // own docstring): a hook this product renamed looks "unknown" to it —
+                // not present in the newly generated commands — and gets preserved
+                // rather than replaced, duplicating the hook under its old, now-dead
+                // command forever. Strip known-obsolete commands first so --force
+                // actually retires them instead of running them alongside the new one.
+                existing.hooks = mergeHooksPreservingUnknown(stripObsoleteHookCommands(existing.hooks), generated.hooks);
                 merged = true;
             }
             else if (generated.hooks && !existing.hooks) {
@@ -73,6 +79,29 @@ export async function writeSettings(targetDir, options, result) {
     atomicWriteFile(settingsPath, `${JSON.stringify(generated, null, 2)}\n`);
     result.created.files.push('.claude/settings.json');
 }
+/**
+ * Drop hook entries whose command references a helper this product has
+ * renamed (OBSOLETE_HELPER_NAMES) — run only under --force, right before
+ * mergeHooksPreservingUnknown, so those entries don't survive the merge as
+ * "unknown" duplicates of the hook's new, renamed form. Groups left with no
+ * hooks are dropped entirely rather than kept as an empty shell.
+ */
+function stripObsoleteHookCommands(hooks) {
+    if (!hooks)
+        return hooks;
+    const result = {};
+    for (const [eventType, groups] of Object.entries(hooks)) {
+        const cleaned = groups
+            .map((group) => ({
+            ...group,
+            hooks: (group.hooks ?? []).filter((h) => !OBSOLETE_HELPER_NAMES.some((name) => h.command.includes(name))),
+        }))
+            .filter((group) => (group.hooks?.length ?? 0) > 0);
+        if (cleaned.length > 0)
+            result[eventType] = cleaned;
+    }
+    return result;
+}
 /**
  * Merge freshly generated hooks into an existing hooks object without losing
  * hook registrations the generator doesn't itself produce, and without
@@ -239,6 +268,29 @@ export async function writeHelpers(targetDir, options, result) {
         const geminiHelpersDir = path.join(targetDir, '.gemini', 'helpers');
         copyRecursive(sourceHelpersDir, geminiHelpersDir, '');
     }
+    // --force means writeSettings (called elsewhere in this same init run) is
+    // about to refresh settings.json's hook commands via its preserving merge,
+    // which strips references to any OBSOLETE_HELPER_NAMES entry (see
+    // stripObsoleteHookCommands below) — so it's safe here to also remove any
+    // helper this product shipped in the past under a name it no longer uses,
+    // otherwise a renamed helper (e.g. graphify-freshen.cjs ->
+    // monograph-freshen.cjs) would sit forever as a dead file nothing
+    // references. A plain (non-force) init never deletes anything, matching
+    // every other write below.
+    if (options.force) {
+        for (const [label, dir] of [
+            ['.claude/helpers', helpersDir],
+            ['.gemini/helpers', path.join(targetDir, '.gemini', 'helpers')],
+        ]) {
+            for (const name of OBSOLETE_HELPER_NAMES) {
+                const obsoletePath = path.join(dir, name);
+                if (fs.existsSync(obsoletePath)) {
+                    fs.rmSync(obsoletePath);
+                    result.created.files.push(`[removed] ${label}/${name} (renamed upstream)`);
+                }
+            }
+        }
+    }
     // Always run the fallback generator too — it only fills in files still missing
     // after the source copy above (it no-ops on anything the copy already wrote).
     // Without this, a source dir that's present but incomplete (e.g. missing

package/dist/src/init/write-claude.js.map

@@ -1 +1 @@
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package/dist/src/mcp-client.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"mcp-client.d.ts","sourceRoot":"","sources":["../../src/mcp-client.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAIH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAC;AAiGpD,wBAAgB,cAAc,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAEtE;AA2FD;;GAEG;AACH,qBAAa,cAAe,SAAQ,KAAK;IAG9B,QAAQ,EAAE,MAAM;IAChB,KAAK,CAAC,EAAE,KAAK;IAHtB,YACE,OAAO,EAAE,MAAM,EACR,QAAQ,EAAE,MAAM,EAChB,KAAK,CAAC,EAAE,KAAK,YAAA,EAIrB;CACF;AAyFD;;GAEG;AACH,wBAAsB,WAAW,CAAC,CAAC,GAAG,OAAO,EAC3C,QAAQ,EAAE,MAAM,EAChB,KAAK,GAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAM,EACnC,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAChC,OAAO,CAAC,CAAC,CAAC,CAoDZ;AAED;;GAEG;AACH,wBAAsB,eAAe,CACnC,QAAQ,EAAE,MAAM,GACf,OAAO,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG,SAAS,CAAC,CAe/C;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,QAAQ,CAAC,EAAE,MAAM,GAChB,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,CAAC,CAAC,CA0BjE;AAED;;;GAGG;AACH,wBAAsB,cAAc,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC,CAIzD;AAED;;;;;;;GAOG;AACH,wBAAsB,kBAAkB,CACtC,KAAK,EAAE,MAAM,EACb,QAAQ,CAAC,EAAE,MAAM,EACjB,KAAK,SAAK,GACT,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG;IAAE,QAAQ,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC,CAiCjE;AAED;;GAEG;AACH,wBAAsB,OAAO,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAIhE;AAED;;GAEG;AACH,wBAAsB,iBAAiB,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC,CAO3D;AAED;;GAEG;AACH,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,MAAM,EAChB,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAC7B,OAAO,CAAC;IAAE,KAAK,EAAE,OAAO,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC,CA2BhD"}
+{"version":3,"file":"mcp-client.d.ts","sourceRoot":"","sources":["../../src/mcp-client.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAIH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAC;AAgGpD,wBAAgB,cAAc,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAEtE;AA2FD;;GAEG;AACH,qBAAa,cAAe,SAAQ,KAAK;IAG9B,QAAQ,EAAE,MAAM;IAChB,KAAK,CAAC,EAAE,KAAK;IAHtB,YACE,OAAO,EAAE,MAAM,EACR,QAAQ,EAAE,MAAM,EAChB,KAAK,CAAC,EAAE,KAAK,YAAA,EAIrB;CACF;AAyFD;;GAEG;AACH,wBAAsB,WAAW,CAAC,CAAC,GAAG,OAAO,EAC3C,QAAQ,EAAE,MAAM,EAChB,KAAK,GAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAM,EACnC,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAChC,OAAO,CAAC,CAAC,CAAC,CAoDZ;AAED;;GAEG;AACH,wBAAsB,eAAe,CACnC,QAAQ,EAAE,MAAM,GACf,OAAO,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG,SAAS,CAAC,CAe/C;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,QAAQ,CAAC,EAAE,MAAM,GAChB,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,CAAC,CAAC,CA0BjE;AAED;;;GAGG;AACH,wBAAsB,cAAc,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC,CAIzD;AAED;;;;;;;GAOG;AACH,wBAAsB,kBAAkB,CACtC,KAAK,EAAE,MAAM,EACb,QAAQ,CAAC,EAAE,MAAM,EACjB,KAAK,SAAK,GACT,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,CAAC,GAAG;IAAE,QAAQ,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC,CAiCjE;AAED;;GAEG;AACH,wBAAsB,OAAO,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAIhE;AAED;;GAEG;AACH,wBAAsB,iBAAiB,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC,CAO3D;AAED;;GAEG;AACH,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,MAAM,EAChB,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAC7B,OAAO,CAAC;IAAE,KAAK,EAAE,OAAO,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC,CA2BhD"}

package/dist/src/mcp-client.js

@@ -44,7 +44,6 @@ const CATEGORY_LOADERS = {
     guidance: async () => (await import('./mcp-tools/guidance-tools.js')).guidanceTools,
     autopilot: async () => (await import('./mcp-tools/autopilot-tools.js')).autopilotTools,
     monograph: async () => (await import('./mcp-tools/monograph-tools.js')).monographTools,
-    graphify: async () => (await import('./mcp-tools/graphify-tools.js')).graphifyTools,
     coverage: async () => (await import('./monovector/coverage-tools.js')).coverageRouterTools,
     quality: async () => (await import('./mcp-tools/quality-tools.js')).qualityTools,
     knowledge: async () => (await import('./mcp-tools/knowledge-tools.js')).knowledgeTools,

package/dist/src/mcp-client.js.map

@@ -1 +1 @@
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package/dist/src/mcp-tools/index.d.ts

@@ -11,7 +11,6 @@ export { claimsTools } from './claims-tools.js';
 export { configTools } from './config-tools.js';
 export { embeddingsTools } from './embeddings-tools.js';
 export { githubTools } from './github-tools.js';
-export { graphifyTools } from './graphify-tools.js';
 export { guidanceTools } from './guidance-tools.js';
 export { hooksTools } from './hooks-tools.js';
 export { knowledgeTools } from './knowledge-tools.js';

package/dist/src/mcp-tools/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAElD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,YAAY,EAAE,OAAO,EAAE,kBAAkB,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAElD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,YAAY,EAAE,OAAO,EAAE,kBAAkB,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC"}

package/dist/src/mcp-tools/index.js

@@ -11,7 +11,6 @@ export { claimsTools } from './claims-tools.js';
 export { configTools } from './config-tools.js';
 export { embeddingsTools } from './embeddings-tools.js';
 export { githubTools } from './github-tools.js';
-export { graphifyTools } from './graphify-tools.js';
 export { guidanceTools } from './guidance-tools.js';
 export { hooksTools } from './hooks-tools.js';
 export { knowledgeTools } from './knowledge-tools.js';

package/dist/src/mcp-tools/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/mcp-tools/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,yBAAyB;AACzB,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/mcp-tools/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,yBAAyB;AACzB,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC"}

package/dist/src/mcp-tools/monograph/index.d.ts

@@ -1,9 +1,8 @@
 import type { MCPTool } from '../types.js';
 export { preferSymbolHits } from './shared.js';
 /**
- * Full tool list regardless of gating — used by the graphify compat shims,
- * which must resolve targets (e.g. monograph_community) even when the
- * advanced set is not exposed over MCP.
+ * Full tool list regardless of gating — used by tests that need the advanced
+ * set (e.g. monograph_community) even when it isn't exposed over MCP.
  */
 export declare const allMonographTools: MCPTool[];
 export declare const monographTools: MCPTool[];