@monoes/monomindcli 1.6.0

package/.claude/commands/github/swarm-pr.md

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+# Swarm PR - Managing Swarms through Pull Requests
+
+## Overview
+
+Create and manage AI swarms directly from GitHub Pull Requests, enabling seamless integration with your development workflow.
+
+## Core Features
+
+### 1. PR-Based Swarm Creation
+
+```bash
+# Create swarm from PR description using gh CLI
+gh pr view 123 --json body,title,labels,files | npx ruv-swarm swarm create-from-pr
+
+# Auto-spawn agents based on PR labels
+gh pr view 123 --json labels | npx ruv-swarm swarm auto-spawn
+
+# Create swarm with PR context
+gh pr view 123 --json body,labels,author,assignees | \
+  npx ruv-swarm swarm init --from-pr-data
+```
+
+### 2. PR Comment Commands
+
+Execute swarm commands via PR comments:
+
+```markdown
+<!-- In PR comment -->
+
+/swarm init mesh 6
+/swarm spawn coder "Implement authentication"
+/swarm spawn tester "Write unit tests"
+/swarm status
+```
+
+### 3. Automated PR Workflows
+
+```yaml
+# .github/workflows/swarm-pr.yml
+name: Swarm PR Handler
+on:
+  pull_request:
+    types: [opened, labeled]
+  issue_comment:
+    types: [created]
+
+jobs:
+  swarm-handler:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v1
+      - name: Handle Swarm Command
+        run: |
+          if [[ "${{ github.event.comment.body }}" == /swarm* ]]; then
+            npx ruv-swarm github handle-comment \
+              --pr ${{ github.event.pull_request.number }} \
+              --comment "${{ github.event.comment.body }}"
+          fi
+```
+
+## PR Label Integration
+
+### Automatic Agent Assignment
+
+Map PR labels to agent types:
+
+```json
+{
+  "label-mapping": {
+    "bug": ["debugger", "tester"],
+    "feature": ["architect", "coder", "tester"],
+    "refactor": ["analyst", "coder"],
+    "docs": ["researcher", "writer"],
+    "performance": ["analyst", "optimizer"]
+  }
+}
+```
+
+### Label-Based Topology
+
+```bash
+# Small PR (< 100 lines): ring topology
+# Medium PR (100-500 lines): mesh topology
+# Large PR (> 500 lines): hierarchical topology
+npx ruv-swarm github pr-topology --pr 123
+```
+
+## PR Swarm Commands
+
+### Initialize from PR
+
+```bash
+# Create swarm with PR context using gh CLI
+PR_DIFF=$(gh pr diff 123)
+PR_INFO=$(gh pr view 123 --json title,body,labels,files,reviews)
+
+npx ruv-swarm github pr-init 123 \
+  --auto-agents \
+  --pr-data "$PR_INFO" \
+  --diff "$PR_DIFF" \
+  --analyze-impact
+```
+
+### Progress Updates
+
+```bash
+# Post swarm progress to PR using gh CLI
+PROGRESS=$(npx ruv-swarm github pr-progress 123 --format markdown)
+
+gh pr comment 123 --body "$PROGRESS"
+
+# Update PR labels based on progress
+if [[ $(echo "$PROGRESS" | grep -o '[0-9]\+%' | sed 's/%//') -gt 90 ]]; then
+  gh pr edit 123 --add-label "ready-for-review"
+fi
+```
+
+### Code Review Integration
+
+```bash
+# Create review agents with gh CLI integration
+PR_FILES=$(gh pr view 123 --json files --jq '.files[].path')
+
+# Run swarm review
+REVIEW_RESULTS=$(npx ruv-swarm github pr-review 123 \
+  --agents "security,performance,style" \
+  --files "$PR_FILES")
+
+# Post review comments using gh CLI
+echo "$REVIEW_RESULTS" | jq -r '.comments[]' | while read -r comment; do
+  FILE=$(echo "$comment" | jq -r '.file')
+  LINE=$(echo "$comment" | jq -r '.line')
+  BODY=$(echo "$comment" | jq -r '.body')
+
+  gh pr review 123 --comment --body "$BODY"
+done
+```
+
+## Advanced Features
+
+### 1. Multi-PR Swarm Coordination
+
+```bash
+# Coordinate swarms across related PRs
+npx ruv-swarm github multi-pr \
+  --prs "123,124,125" \
+  --strategy "parallel" \
+  --share-memory
+```
+
+### 2. PR Dependency Analysis
+
+```bash
+# Analyze PR dependencies
+npx ruv-swarm github pr-deps 123 \
+  --spawn-agents \
+  --resolve-conflicts
+```
+
+### 3. Automated PR Fixes
+
+```bash
+# Auto-fix PR issues
+npx ruv-swarm github pr-fix 123 \
+  --issues "lint,test-failures" \
+  --commit-fixes
+```
+
+## Best Practices
+
+### 1. PR Templates
+
+```markdown
+<!-- .github/pull_request_template.md -->
+
+## Swarm Configuration
+
+- Topology: [mesh/hierarchical/ring/star]
+- Max Agents: [number]
+- Auto-spawn: [yes/no]
+- Priority: [high/medium/low]
+
+## Tasks for Swarm
+
+- [ ] Task 1 description
+- [ ] Task 2 description
+```
+
+### 2. Status Checks
+
+```yaml
+# Require swarm completion before merge
+required_status_checks:
+  contexts:
+    - "swarm/tasks-complete"
+    - "swarm/tests-pass"
+    - "swarm/review-approved"
+```
+
+### 3. PR Merge Automation
+
+```bash
+# Auto-merge when swarm completes using gh CLI
+# Check swarm completion status
+SWARM_STATUS=$(npx ruv-swarm github pr-status 123)
+
+if [[ "$SWARM_STATUS" == "complete" ]]; then
+  # Check review requirements
+  REVIEWS=$(gh pr view 123 --json reviews --jq '.reviews | length')
+
+  if [[ $REVIEWS -ge 2 ]]; then
+    # Enable auto-merge
+    gh pr merge 123 --auto --squash
+  fi
+fi
+```
+
+## Webhook Integration
+
+### Setup Webhook Handler
+
+```javascript
+// webhook-handler.js
+const { createServer } = require("http");
+const { execSync } = require("child_process");
+
+createServer((req, res) => {
+  if (req.url === "/github-webhook") {
+    const event = JSON.parse(body);
+
+    if (event.action === "opened" && event.pull_request) {
+      execSync(`npx ruv-swarm github pr-init ${event.pull_request.number}`);
+    }
+
+    res.writeHead(200);
+    res.end("OK");
+  }
+}).listen(3000);
+```
+
+## Examples
+
+### Feature Development PR
+
+```bash
+# PR #456: Add user authentication
+npx ruv-swarm github pr-init 456 \
+  --topology hierarchical \
+  --agents "architect,coder,tester,security" \
+  --auto-assign-tasks
+```
+
+### Bug Fix PR
+
+```bash
+# PR #789: Fix memory leak
+npx ruv-swarm github pr-init 789 \
+  --topology mesh \
+  --agents "debugger,analyst,tester" \
+  --priority high
+```
+
+### Documentation PR
+
+```bash
+# PR #321: Update API docs
+npx ruv-swarm github pr-init 321 \
+  --topology ring \
+  --agents "researcher,writer,reviewer" \
+  --validate-links
+```
+
+## Metrics & Reporting
+
+### PR Swarm Analytics
+
+```bash
+# Generate PR swarm report
+npx ruv-swarm github pr-report 123 \
+  --metrics "completion-time,agent-efficiency,token-usage" \
+  --format markdown
+```
+
+### Dashboard Integration
+
+```bash
+# Export to GitHub Insights
+npx ruv-swarm github export-metrics \
+  --pr 123 \
+  --to-insights
+```
+
+## Security Considerations
+
+1. **Token Permissions**: Ensure GitHub tokens have appropriate scopes
+2. **Command Validation**: Validate all PR comments before execution
+3. **Rate Limiting**: Implement rate limits for PR operations
+4. **Audit Trail**: Log all swarm operations for compliance
+
+## Integration with Claude Code
+
+When using with Claude Code:
+
+1. Claude Code reads PR diff and context
+2. Swarm coordinates approach based on PR type
+3. Agents work in parallel on different aspects
+4. Progress updates posted to PR automatically
+5. Final review performed before marking ready
+
+See also: [swarm-issue.md](./swarm-issue.md), [workflow-automation.md](./workflow-automation.md)

package/.claude/commands/github/sync-coordinator.md

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+# GitHub Sync Coordinator
+
+## Purpose
+Multi-package synchronization and version alignment with ruv-swarm coordination for seamless integration between claude-code-flow and ruv-swarm packages.
+
+## Capabilities
+- **Package synchronization** with intelligent dependency resolution
+- **Version alignment** across multiple repositories
+- **Cross-package integration** with automated testing
+- **Documentation synchronization** for consistent user experience
+- **Release coordination** with automated deployment pipelines
+
+## Tools Available
+- `mcp__github__push_files`
+- `mcp__github__create_or_update_file`
+- `mcp__github__get_file_contents`
+- `mcp__github__create_pull_request`
+- `mcp__github__search_repositories`
+- `mcp__monomind__*` (all swarm coordination tools)
+- `TodoWrite`, `TodoRead`, `Task`, `Bash`, `Read`, `Write`, `Edit`, `MultiEdit`
+
+## Usage Patterns
+
+### 1. Synchronize Package Dependencies
+```javascript
+// Initialize sync coordination swarm
+mcp__monomind__swarm_init { topology: "hierarchical", maxAgents: 5 }
+mcp__monomind__agent_spawn { type: "coordinator", name: "Sync Coordinator" }
+mcp__monomind__agent_spawn { type: "analyst", name: "Dependency Analyzer" }
+mcp__monomind__agent_spawn { type: "coder", name: "Integration Developer" }
+mcp__monomind__agent_spawn { type: "tester", name: "Validation Engineer" }
+
+// Analyze current package states
+Read("/workspaces/ruv-FANN/claude-code-flow/claude-code-flow/package.json")
+Read("/workspaces/ruv-FANN/ruv-swarm/npm/package.json")
+
+// Synchronize versions and dependencies using gh CLI
+// First create branch
+Bash("gh api repos/:owner/:repo/git/refs -f ref='refs/heads/sync/package-alignment' -f sha=$(gh api repos/:owner/:repo/git/refs/heads/main --jq '.object.sha')")
+
+// Update file using gh CLI
+Bash(`gh api repos/:owner/:repo/contents/claude-code-flow/claude-code-flow/package.json \
+  --method PUT \
+  -f message="feat: Align Node.js version requirements across packages" \
+  -f branch="sync/package-alignment" \
+  -f content="$(echo '{ updated package.json with aligned versions }' | base64)" \
+  -f sha="$(gh api repos/:owner/:repo/contents/claude-code-flow/claude-code-flow/package.json?ref=sync/package-alignment --jq '.sha')")`)
+
+// Orchestrate validation
+mcp__monomind__task_orchestrate {
+  task: "Validate package synchronization and run integration tests",
+  strategy: "parallel",
+  priority: "high"
+}
+```
+
+### 2. Documentation Synchronization
+```javascript
+// Synchronize CLAUDE.md files across packages using gh CLI
+// Get file contents
+CLAUDE_CONTENT=$(Bash("gh api repos/:owner/:repo/contents/ruv-swarm/docs/CLAUDE.md --jq '.content' | base64 -d"))
+
+// Update claude-code-flow CLAUDE.md to match using gh CLI
+// Create or update branch
+Bash("gh api repos/:owner/:repo/git/refs -f ref='refs/heads/sync/documentation' -f sha=$(gh api repos/:owner/:repo/git/refs/heads/main --jq '.object.sha') 2>/dev/null || gh api repos/:owner/:repo/git/refs/heads/sync/documentation --method PATCH -f sha=$(gh api repos/:owner/:repo/git/refs/heads/main --jq '.object.sha')")
+
+// Update file
+Bash(`gh api repos/:owner/:repo/contents/claude-code-flow/claude-code-flow/CLAUDE.md \
+  --method PUT \
+  -f message="docs: Synchronize CLAUDE.md with ruv-swarm integration patterns" \
+  -f branch="sync/documentation" \
+  -f content="$(echo '# Claude Code Configuration for ruv-swarm\n\n[synchronized content]' | base64)" \
+  -f sha="$(gh api repos/:owner/:repo/contents/claude-code-flow/claude-code-flow/CLAUDE.md?ref=sync/documentation --jq '.sha' 2>/dev/null || echo '')")`)
+
+// Store sync state in memory
+mcp__monomind__memory_usage {
+  action: "store",
+  key: "sync/documentation/status",
+  value: { timestamp: Date.now(), status: "synchronized", files: ["CLAUDE.md"] }
+}
+```
+
+### 3. Cross-Package Feature Integration
+```javascript
+// Coordinate feature implementation across packages
+mcp__github__push_files {
+  owner: "nokhodian",
+  repo: "ruv-FANN",
+  branch: "feature/github-commands",
+  files: [
+    {
+      path: "claude-code-flow/claude-code-flow/.claude/commands/github/github-modes.md",
+      content: "[GitHub modes documentation]"
+    },
+    {
+      path: "claude-code-flow/claude-code-flow/.claude/commands/github/pr-manager.md", 
+      content: "[PR manager documentation]"
+    },
+    {
+      path: "ruv-swarm/npm/src/github-coordinator/claude-hooks.js",
+      content: "[GitHub coordination hooks]"
+    }
+  ],
+  message: "feat: Add comprehensive GitHub workflow integration"
+}
+
+// Create coordinated pull request using gh CLI
+Bash(`gh pr create \
+  --repo :owner/:repo \
+  --title "Feature: GitHub Workflow Integration with Swarm Coordination" \
+  --head "feature/github-commands" \
+  --base "main" \
+  --body "## 🚀 GitHub Workflow Integration
+
+### Features Added
+- ✅ Comprehensive GitHub command modes
+- ✅ Swarm-coordinated PR management  
+- ✅ Automated issue tracking
+- ✅ Cross-package synchronization
+
+### Integration Points
+- Claude-code-flow: GitHub command modes in .claude/commands/github/
+- ruv-swarm: GitHub coordination hooks and utilities
+- Documentation: Synchronized CLAUDE.md instructions
+
+### Testing
+- [x] Package dependency verification
+- [x] Integration test suite
+- [x] Documentation validation
+- [x] Cross-package compatibility
+
+### Swarm Coordination
+This integration uses ruv-swarm agents for:
+- Multi-agent GitHub workflow management
+- Automated testing and validation
+- Progress tracking and coordination
+- Memory-based state management
+
+---
+🤖 Generated with Claude Code using ruv-swarm coordination`
+}
+```
+
+## Batch Synchronization Example
+
+### Complete Package Sync Workflow:
+```javascript
+[Single Message - Complete Synchronization]:
+  // Initialize comprehensive sync swarm
+  mcp__monomind__swarm_init { topology: "mesh", maxAgents: 6 }
+  mcp__monomind__agent_spawn { type: "coordinator", name: "Master Sync Coordinator" }
+  mcp__monomind__agent_spawn { type: "analyst", name: "Package Analyzer" }
+  mcp__monomind__agent_spawn { type: "coder", name: "Integration Coder" }
+  mcp__monomind__agent_spawn { type: "tester", name: "Validation Tester" }
+  mcp__monomind__agent_spawn { type: "reviewer", name: "Quality Reviewer" }
+  
+  // Read current state of both packages
+  Read("/workspaces/ruv-FANN/claude-code-flow/claude-code-flow/package.json")
+  Read("/workspaces/ruv-FANN/ruv-swarm/npm/package.json")
+  Read("/workspaces/ruv-FANN/claude-code-flow/claude-code-flow/CLAUDE.md")
+  Read("/workspaces/ruv-FANN/ruv-swarm/docs/CLAUDE.md")
+  
+  // Synchronize multiple files simultaneously
+  mcp__github__push_files {
+    branch: "sync/complete-integration",
+    files: [
+      { path: "claude-code-flow/claude-code-flow/package.json", content: "[aligned package.json]" },
+      { path: "claude-code-flow/claude-code-flow/CLAUDE.md", content: "[synchronized CLAUDE.md]" },
+      { path: "claude-code-flow/claude-code-flow/.claude/commands/github/github-modes.md", content: "[GitHub modes]" }
+    ],
+    message: "feat: Complete package synchronization with GitHub integration"
+  }
+  
+  // Run validation tests
+  Bash("cd /workspaces/ruv-FANN/claude-code-flow/claude-code-flow && npm install")
+  Bash("cd /workspaces/ruv-FANN/claude-code-flow/claude-code-flow && npm test")
+  Bash("cd /workspaces/ruv-FANN/ruv-swarm/npm && npm test")
+  
+  // Track synchronization progress
+  TodoWrite { todos: [
+    { id: "sync-deps", content: "Synchronize package dependencies", status: "completed", priority: "high" },
+    { id: "sync-docs", content: "Align documentation", status: "completed", priority: "medium" },
+    { id: "sync-github", content: "Add GitHub command integration", status: "completed", priority: "high" },
+    { id: "sync-test", content: "Validate synchronization", status: "completed", priority: "medium" },
+    { id: "sync-pr", content: "Create integration PR", status: "pending", priority: "high" }
+  ]}
+  
+  // Store comprehensive sync state
+  mcp__monomind__memory_usage {
+    action: "store",
+    key: "sync/complete/status",
+    value: {
+      timestamp: Date.now(),
+      packages_synced: ["claude-code-flow", "ruv-swarm"],
+      version_alignment: "completed",
+      documentation_sync: "completed",
+      github_integration: "completed",
+      validation_status: "passed"
+    }
+  }
+```
+
+## Synchronization Strategies
+
+### 1. **Version Alignment Strategy**
+```javascript
+// Intelligent version synchronization
+const syncStrategy = {
+  nodeVersion: ">=20.0.0",  // Align to highest requirement
+  dependencies: {
+    "better-sqlite3": "^12.2.0",  // Use latest stable
+    "ws": "^8.14.2"  // Maintain compatibility
+  },
+  engines: {
+    aligned: true,
+    strategy: "highest_common"
+  }
+}
+```
+
+### 2. **Documentation Sync Pattern**
+```javascript
+// Keep documentation consistent across packages
+const docSyncPattern = {
+  sourceOfTruth: "ruv-swarm/docs/CLAUDE.md",
+  targets: [
+    "claude-code-flow/claude-code-flow/CLAUDE.md",
+    "CLAUDE.md"  // Root level
+  ],
+  customSections: {
+    "claude-code-flow": "GitHub Commands Integration",
+    "ruv-swarm": "MCP Tools Reference"
+  }
+}
+```
+
+### 3. **Integration Testing Matrix**
+```javascript
+// Comprehensive testing across synchronized packages
+const testMatrix = {
+  packages: ["claude-code-flow", "ruv-swarm"],
+  tests: [
+    "unit_tests",
+    "integration_tests", 
+    "cross_package_tests",
+    "mcp_integration_tests",
+    "github_workflow_tests"
+  ],
+  validation: "parallel_execution"
+}
+```
+
+## Best Practices
+
+### 1. **Atomic Synchronization**
+- Use batch operations for related changes
+- Maintain consistency across all sync operations
+- Implement rollback mechanisms for failed syncs
+
+### 2. **Version Management**
+- Semantic versioning alignment
+- Dependency compatibility validation
+- Automated version bump coordination
+
+### 3. **Documentation Consistency**
+- Single source of truth for shared concepts
+- Package-specific customizations
+- Automated documentation validation
+
+### 4. **Testing Integration**
+- Cross-package test validation
+- Integration test automation
+- Performance regression detection
+
+## Monitoring and Metrics
+
+### Sync Quality Metrics:
+- Package version alignment percentage
+- Documentation consistency score
+- Integration test success rate
+- Synchronization completion time
+
+### Automated Reporting:
+- Weekly sync status reports
+- Dependency drift detection
+- Documentation divergence alerts
+- Integration health monitoring
+
+## Error Handling and Recovery
+
+### Automatic handling of:
+- Version conflict resolution
+- Merge conflict detection and resolution
+- Test failure recovery strategies
+- Documentation sync conflicts
+
+### Recovery procedures:
+- Automated rollback on critical failures
+- Incremental sync retry mechanisms
+- Manual intervention points for complex conflicts
+- State preservation across sync operations