@monoes/monomindcli 1.19.0 → 2.0.0

package/dist/src/transfer/store/discovery.js

@@ -325,83 +325,35 @@ export class PatternDiscovery {
         catch {
             // GCS not available
         }
-        // Return fallback genesis registry if all else fails
-        console.log(`[Discovery] Using built-in genesis registry`);
-        return this.getGenesisRegistry(cid);
+        // No registry could be reached. Previously this fell back to a built-in
+        // "genesis registry" that invented a pattern with fabricated stats
+        // (1,000 downloads, 5.0 rating, 42 reviews). Return an honest empty
+        // registry instead.
+        console.log(`[Discovery] No registry reachable — transfer store requires a configured registry`);
+        return this.getEmptyRegistry();
     }
     /**
-     * Get built-in genesis registry (always available offline)
+     * Honest empty registry returned when no registry is reachable.
+     * Contains no patterns and no fabricated stats.
      */
-    getGenesisRegistry(cid) {
+    getEmptyRegistry() {
         return {
             version: '1.0.0',
             updatedAt: new Date().toISOString(),
-            ipnsName: 'k51qzi5uqu5dj0w8q1xvqn8ql2g4p7x8qpk9vz3xm1y2n3o4p5q6r7s8t9u0v',
+            ipnsName: '',
             previousCid: undefined,
-            patterns: [
-                {
-                    id: 'seraphine-genesis-v1',
-                    name: 'seraphine-genesis',
-                    displayName: 'Seraphine Genesis',
-                    description: 'The foundational Monomind pattern model. Contains core routing patterns, complexity heuristics, and coordination trajectories for multi-agent swarms.',
-                    version: '1.0.0',
-                    cid: 'bafybeibqsa442vty2cvhku4ujlrkupyl75536ene7ybqsa442v',
-                    size: 8808,
-                    checksum: '8df766b89d044815c84796e7f33ba30d7806bff7eb2a75e2a0b7d26b64c45231',
-                    author: {
-                        id: 'monomind-team',
-                        displayName: 'Monomind Team',
-                        verified: true,
-                        patterns: 1,
-                        totalDownloads: 1000,
-                    },
-                    license: 'MIT',
-                    categories: ['routing', 'coordination'],
-                    tags: ['genesis', 'foundational', 'routing', 'swarm', 'coordination', 'multi-agent', 'hello-world'],
-                    language: 'typescript',
-                    framework: 'monomind',
-                    downloads: 1000,
-                    rating: 5.0,
-                    ratingCount: 42,
-                    lastUpdated: new Date().toISOString(),
-                    createdAt: '2026-01-08T18:42:31.126Z',
-                    minMonomindVersion: '3.0.0',
-                    verified: true,
-                    trustLevel: 'verified',
-                    signature: 'ed25519:genesis-pattern-signature',
-                    publicKey: 'ed25519:monomind-team-key',
-                },
-            ],
-            categories: [
-                { id: 'routing', name: 'Task Routing', description: 'Task routing patterns', patternCount: 1, icon: '🔀' },
-                { id: 'coordination', name: 'Swarm Coordination', description: 'Multi-agent coordination', patternCount: 1, icon: '🐝' },
-                { id: 'security', name: 'Security', description: 'Security patterns', patternCount: 0, icon: '🔒' },
-                { id: 'performance', name: 'Performance', description: 'Performance patterns', patternCount: 0, icon: '⚡' },
-                { id: 'testing', name: 'Testing', description: 'Testing patterns', patternCount: 0, icon: '🧪' },
-            ],
-            authors: [
-                {
-                    id: 'monomind-team',
-                    displayName: 'Monomind Team',
-                    publicKey: 'ed25519:monomind-team-key',
-                    verified: true,
-                    patterns: 1,
-                    totalDownloads: 1000,
-                },
-            ],
-            totalPatterns: 1,
-            totalDownloads: 1000,
-            totalAuthors: 1,
-            featured: ['seraphine-genesis-v1'],
-            trending: ['seraphine-genesis-v1'],
-            newest: ['seraphine-genesis-v1'],
-            // No signature on the genesis fallback. Previously this slot used
-            // `crypto.randomBytes(32)` which is meaningless by construction — every
-            // call would produce a different "valid" signature that no real key
-            // signed. Trusted-registry callers must reject this fallback (the
-            // verification path requires `registrySignature` to be present and
-            // verified against a pinned public key).
-            registryPublicKey: 'ed25519:monomind-registry-key',
+            patterns: [],
+            categories: [],
+            authors: [],
+            totalPatterns: 0,
+            totalDownloads: 0,
+            totalAuthors: 0,
+            featured: [],
+            trending: [],
+            newest: [],
+            // No signature — trusted-registry callers must reject this fallback
+            // (the verification path requires `registrySignature` to be present
+            // and verified against a pinned public key).
         };
     }
     /**

package/dist/src/transfer/store/discovery.js.map

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package/dist/src/update/checker.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"checker.d.ts","sourceRoot":"","sources":["../../../src/update/checker.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAqBH,MAAM,WAAW,iBAAiB;IAChC,OAAO,EAAE,MAAM,CAAC;IAChB,cAAc,EAAE,MAAM,CAAC;IACvB,aAAa,EAAE,MAAM,CAAC;IACtB,UAAU,EAAE,OAAO,GAAG,OAAO,GAAG,OAAO,GAAG,MAAM,CAAC;IACjD,gBAAgB,EAAE,OAAO,CAAC;IAC1B,QAAQ,EAAE,UAAU,GAAG,MAAM,GAAG,QAAQ,GAAG,KAAK,CAAC;IACjD,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,YAAY;IAC3B,OAAO,EAAE,OAAO,CAAC;IACjB,kBAAkB,EAAE,MAAM,CAAC;IAC3B,UAAU,EAAE;QACV,KAAK,EAAE,OAAO,CAAC;QACf,KAAK,EAAE,OAAO,CAAC;QACf,KAAK,EAAE,OAAO,CAAC;KAChB,CAAC;IACF,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,UAAU,GAAG,MAAM,GAAG,QAAQ,GAAG,KAAK,CAAC,CAAC;IACjE,OAAO,EAAE,MAAM,EAAE,CAAC;CACnB;AAED,QAAA,MAAM,cAAc,EAAE,YAiBrB,CAAC;AAqIF,wBAAgB,mBAAmB,CAAC,WAAW,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAqCtE;AAED,wBAAsB,eAAe,CACnC,MAAM,GAAE,YAA6B,GACpC,OAAO,CAAC;IAAE,OAAO,EAAE,iBAAiB,EAAE,CAAC;IAAC,OAAO,EAAE,OAAO,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,CAyE9E;AAED,wBAAsB,kBAAkB,CACtC,WAAW,EAAE,MAAM,EACnB,MAAM,GAAE,YAA6B,GACpC,OAAO,CAAC,iBAAiB,GAAG,IAAI,CAAC,CA4BnC;AAED,OAAO,EAAE,cAAc,EAAE,CAAC"}

package/dist/src/update/checker.js

@@ -46,7 +46,6 @@ const MONOMIND_PACKAGES = [
     '@monoes/monograph',
     '@monoes/memory',
     '@monoes/monodesign',
-    '@monomind/guidance',
     '@monomind/hooks',
     '@monomind/mcp',
     '@monomind/routing',

package/dist/src/update/checker.js.map

@@ -1 +1 @@
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package/dist/src/utils/cosine-similarity.d.ts

@@ -0,0 +1,22 @@
+/**
+ * Shared cosine similarity utility.
+ *
+ * Previously duplicated in 5 independent implementations:
+ *   - memory/intelligence.ts (ReasoningBank.cosineSim)
+ *   - mcp-tools/neural-tools.ts (cosineSimilarity)
+ *   - mcp-tools/embeddings-tools.ts (cosineSimilarity)
+ *   - mcp-tools/coherence/types.ts (cosineSimilarity)
+ *   - mcp-tools/coherence/coherence-check.ts (cosineSimilarity)
+ *
+ * This is the single canonical implementation. Accepts number[] or
+ * Float32Array. Handles dimension mismatches gracefully (uses the shorter
+ * length) and returns 0 for zero-magnitude vectors.
+ */
+/**
+ * Compute cosine similarity between two vectors.
+ *
+ * Returns a value in [-1, 1]. Returns 0 when either vector is empty or
+ * has zero magnitude.
+ */
+export declare function cosineSimilarity(a: number[] | Float32Array, b: number[] | Float32Array): number;
+//# sourceMappingURL=cosine-similarity.d.ts.map

package/dist/src/utils/cosine-similarity.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"cosine-similarity.d.ts","sourceRoot":"","sources":["../../../src/utils/cosine-similarity.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAEH;;;;;GAKG;AACH,wBAAgB,gBAAgB,CAC9B,CAAC,EAAE,MAAM,EAAE,GAAG,YAAY,EAC1B,CAAC,EAAE,MAAM,EAAE,GAAG,YAAY,GACzB,MAAM,CAkBR"}

package/dist/src/utils/cosine-similarity.js

@@ -0,0 +1,38 @@
+/**
+ * Shared cosine similarity utility.
+ *
+ * Previously duplicated in 5 independent implementations:
+ *   - memory/intelligence.ts (ReasoningBank.cosineSim)
+ *   - mcp-tools/neural-tools.ts (cosineSimilarity)
+ *   - mcp-tools/embeddings-tools.ts (cosineSimilarity)
+ *   - mcp-tools/coherence/types.ts (cosineSimilarity)
+ *   - mcp-tools/coherence/coherence-check.ts (cosineSimilarity)
+ *
+ * This is the single canonical implementation. Accepts number[] or
+ * Float32Array. Handles dimension mismatches gracefully (uses the shorter
+ * length) and returns 0 for zero-magnitude vectors.
+ */
+/**
+ * Compute cosine similarity between two vectors.
+ *
+ * Returns a value in [-1, 1]. Returns 0 when either vector is empty or
+ * has zero magnitude.
+ */
+export function cosineSimilarity(a, b) {
+    if (!a || !b || a.length === 0 || b.length === 0)
+        return 0;
+    const len = Math.min(a.length, b.length);
+    let dot = 0;
+    let normA = 0;
+    let normB = 0;
+    for (let i = 0; i < len; i++) {
+        const ai = a[i];
+        const bi = b[i];
+        dot += ai * bi;
+        normA += ai * ai;
+        normB += bi * bi;
+    }
+    const mag = Math.sqrt(normA) * Math.sqrt(normB);
+    return mag === 0 ? 0 : dot / mag;
+}
+//# sourceMappingURL=cosine-similarity.js.map

package/dist/src/utils/cosine-similarity.js.map

@@ -0,0 +1 @@
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package/dist/src/utils/input-guards.d.ts

@@ -0,0 +1,51 @@
+/**
+ * Input validation and prompt-injection guards.
+ *
+ * Inlined from the former @monomind/security package. Provides a single
+ * typed entry point for input validation covering string, number, path,
+ * url, and orgName types, plus a heuristic prompt-injection detector
+ * for untrusted external content.
+ *
+ * @module @monomind/cli/utils/input-guards
+ */
+export interface ValidationResult {
+    valid: boolean;
+    error?: string;
+    sanitized?: string;
+}
+export interface ValidateInputOpts {
+    type: 'string' | 'number' | 'path' | 'url' | 'orgName';
+    maxLength?: number;
+    required?: boolean;
+}
+/**
+ * Validate and sanitize an input value.
+ *
+ * @example
+ * const result = validateInput(req.body.name, { type: 'orgName' });
+ * if (!result.valid) throw new Error(result.error);
+ * const safeName = result.sanitized!;
+ */
+export declare function validateInput(value: unknown, opts: ValidateInputOpts): ValidationResult;
+export interface ExternalContentResult {
+    safe: boolean;
+    reason?: string;
+}
+/**
+ * Heuristically check whether `content` contains prompt-injection
+ * patterns. This is a structural / regex-based guard — it does not
+ * call any LLM.
+ *
+ * @param content - The untrusted string to inspect.
+ * @param source  - Optional label describing where the content came
+ *                  from (used only in log-friendly diagnostics, not
+ *                  in the returned reason).
+ * @returns `{ safe: true }` when no injection signal is found, or
+ *          `{ safe: false, reason }` describing the first match.
+ *
+ * @example
+ * const check = await validateExternalContent(userQuery, 'memory search');
+ * if (!check.safe) throw new Error(`Blocked: ${check.reason}`);
+ */
+export declare function validateExternalContent(content: string, source?: string): Promise<ExternalContentResult>;
+//# sourceMappingURL=input-guards.d.ts.map

package/dist/src/utils/input-guards.d.ts.map

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package/dist/src/utils/input-guards.js

@@ -0,0 +1,223 @@
+/**
+ * Input validation and prompt-injection guards.
+ *
+ * Inlined from the former @monomind/security package. Provides a single
+ * typed entry point for input validation covering string, number, path,
+ * url, and orgName types, plus a heuristic prompt-injection detector
+ * for untrusted external content.
+ *
+ * @module @monomind/cli/utils/input-guards
+ */
+import { resolve, isAbsolute } from 'node:path';
+import { cwd } from 'node:process';
+/**
+ * Strip C0 and C1 control characters (U+0000–U+001F, U+007F–U+009F)
+ * but preserve printable ASCII and extended Unicode.
+ */
+function stripControlChars(s) {
+    // eslint-disable-next-line no-control-regex
+    return s.replace(/[\x00-\x1F\x7F-\x9F]/g, '');
+}
+function validateString(value, opts) {
+    if (typeof value !== 'string') {
+        if (opts.required !== false && value == null) {
+            return { valid: false, error: 'Value is required' };
+        }
+        return { valid: false, error: 'Value must be a string' };
+    }
+    if (opts.required !== false && value.length === 0) {
+        return { valid: false, error: 'Value must not be empty' };
+    }
+    const maxLen = opts.maxLength ?? 4096;
+    if (value.length > maxLen) {
+        return {
+            valid: false,
+            error: `Value exceeds maximum length of ${maxLen}`,
+        };
+    }
+    const sanitized = stripControlChars(value);
+    return { valid: true, sanitized };
+}
+function validateNumber(value, opts) {
+    const parsed = typeof value === 'number'
+        ? value
+        : typeof value === 'string' && value.trim() !== ''
+            ? Number(value)
+            : NaN;
+    if (!Number.isFinite(parsed)) {
+        if (opts.required === false && value == null) {
+            return { valid: true };
+        }
+        return { valid: false, error: 'Value must be a finite number' };
+    }
+    return { valid: true, sanitized: String(parsed) };
+}
+function validatePath(value, opts) {
+    if (typeof value !== 'string') {
+        return { valid: false, error: 'Path must be a string' };
+    }
+    if (value.includes('\0')) {
+        return { valid: false, error: 'Path must not contain null bytes' };
+    }
+    // Reject traversal segments
+    if (/(^|[\\/])\.\.($|[\\/])/.test(value)) {
+        return { valid: false, error: 'Path must not contain directory traversal (..)' };
+    }
+    // Reject absolute paths that escape cwd
+    if (isAbsolute(value)) {
+        const cwdPath = cwd();
+        const resolved = resolve(value);
+        if (!resolved.startsWith(cwdPath + '/') && resolved !== cwdPath) {
+            return { valid: false, error: 'Absolute path must not escape the current working directory' };
+        }
+    }
+    const maxLen = opts.maxLength ?? 4096;
+    if (value.length > maxLen) {
+        return { valid: false, error: `Path exceeds maximum length of ${maxLen}` };
+    }
+    return { valid: true, sanitized: value };
+}
+function validateUrl(value, opts) {
+    if (typeof value !== 'string') {
+        return { valid: false, error: 'URL must be a string' };
+    }
+    let parsed;
+    try {
+        parsed = new URL(value);
+    }
+    catch {
+        return { valid: false, error: 'Value is not a valid URL' };
+    }
+    if (parsed.protocol !== 'http:' && parsed.protocol !== 'https:') {
+        return { valid: false, error: 'URL must use http or https protocol' };
+    }
+    const maxLen = opts.maxLength ?? 4096;
+    if (value.length > maxLen) {
+        return { valid: false, error: `URL exceeds maximum length of ${maxLen}` };
+    }
+    return { valid: true, sanitized: parsed.toString() };
+}
+/** Org name: lowercase alphanumeric + hyphens, 1–64 chars, must start with alnum */
+const ORG_NAME_RE = /^[a-z0-9][a-z0-9-]{0,63}$/;
+function validateOrgName(value, _opts) {
+    if (typeof value !== 'string') {
+        return { valid: false, error: 'Org name must be a string' };
+    }
+    if (!ORG_NAME_RE.test(value)) {
+        return {
+            valid: false,
+            error: 'Org name must match ^[a-z0-9][a-z0-9-]{0,63}$ (lowercase, alphanumeric + hyphens, 1–64 chars)',
+        };
+    }
+    return { valid: true, sanitized: value };
+}
+/**
+ * Validate and sanitize an input value.
+ *
+ * @example
+ * const result = validateInput(req.body.name, { type: 'orgName' });
+ * if (!result.valid) throw new Error(result.error);
+ * const safeName = result.sanitized!;
+ */
+export function validateInput(value, opts) {
+    switch (opts.type) {
+        case 'string':
+            return validateString(value, opts);
+        case 'number':
+            return validateNumber(value, opts);
+        case 'path':
+            return validatePath(value, opts);
+        case 'url':
+            return validateUrl(value, opts);
+        case 'orgName':
+            return validateOrgName(value, opts);
+    }
+}
+/**
+ * Case-insensitive patterns that indicate an attempt to override
+ * system-level instructions or inject prompt directives.
+ */
+const INJECTION_PATTERNS = [
+    { re: /ignore\s+(all\s+)?previous\s+instructions/i, label: 'instruction override ("ignore previous instructions")' },
+    { re: /ignore\s+(all\s+)?prior\s+instructions/i, label: 'instruction override ("ignore prior instructions")' },
+    { re: /disregard\s+(all\s+)?(previous|prior|above)\s+instructions/i, label: 'instruction override ("disregard instructions")' },
+    { re: /forget\s+(all\s+)?(previous|prior|above)\s+(instructions|context)/i, label: 'instruction override ("forget instructions")' },
+    { re: /you\s+are\s+now\b/i, label: 'identity hijack ("you are now")' },
+    { re: /act\s+as\s+(if\s+you\s+are|a|an)\b/i, label: 'identity hijack ("act as")' },
+    { re: /pretend\s+(you\s+are|to\s+be)\b/i, label: 'identity hijack ("pretend to be")' },
+    { re: /^system\s*:/im, label: 'system prompt injection ("system:")' },
+    { re: /\[system\]/i, label: 'system prompt injection ("[system]")' },
+    { re: /<<\s*system\s*>>/i, label: 'system prompt injection ("<<system>>")' },
+    { re: /^IMPORTANT\s*:/im, label: 'directive injection ("IMPORTANT:")' },
+    { re: /^INSTRUCTION\s*:/im, label: 'directive injection ("INSTRUCTION:")' },
+    { re: /^OVERRIDE\s*:/im, label: 'directive injection ("OVERRIDE:")' },
+    { re: /\bdo\s+not\s+follow\s+(any\s+)?(previous|prior|earlier)\b/i, label: 'instruction override ("do not follow previous")' },
+    { re: /\bnew\s+instructions?\s*:/i, label: 'directive injection ("new instructions:")' },
+];
+/**
+ * Suspicious encoding patterns that may attempt to smuggle directives
+ * through Base64, hex escapes, or Unicode homoglyphs.
+ */
+const ENCODING_PATTERNS = [
+    // Large Base64 blobs (>80 chars of contiguous base64 alphabet)
+    { re: /[A-Za-z0-9+/=]{80,}/, label: 'suspicious Base64-encoded blob' },
+    // Excessive hex escapes (\x41\x42...)
+    { re: /(\\x[0-9a-fA-F]{2}){6,}/, label: 'suspicious hex-escape sequence' },
+    // Excessive Unicode escapes (AB...)
+    { re: /(\\u[0-9a-fA-F]{4}){6,}/, label: 'suspicious Unicode-escape sequence' },
+];
+/** Threshold ratio of uppercase + directive-like words to total words. */
+const DIRECTIVE_DENSITY_THRESHOLD = 0.4;
+const DIRECTIVE_WORDS = /\b(MUST|SHALL|ALWAYS|NEVER|IMPORTANT|OVERRIDE|IMMEDIATELY|MANDATORY|REQUIRED|CRITICAL)\b/g;
+/**
+ * Heuristically check whether `content` contains prompt-injection
+ * patterns. This is a structural / regex-based guard — it does not
+ * call any LLM.
+ *
+ * @param content - The untrusted string to inspect.
+ * @param source  - Optional label describing where the content came
+ *                  from (used only in log-friendly diagnostics, not
+ *                  in the returned reason).
+ * @returns `{ safe: true }` when no injection signal is found, or
+ *          `{ safe: false, reason }` describing the first match.
+ *
+ * @example
+ * const check = await validateExternalContent(userQuery, 'memory search');
+ * if (!check.safe) throw new Error(`Blocked: ${check.reason}`);
+ */
+export async function validateExternalContent(content, source) {
+    if (typeof content !== 'string') {
+        return { safe: false, reason: 'Content must be a string' };
+    }
+    // Empty / very short content is trivially safe.
+    if (content.length === 0) {
+        return { safe: true };
+    }
+    // --- 1. Direct injection patterns ---
+    for (const { re, label } of INJECTION_PATTERNS) {
+        if (re.test(content)) {
+            return { safe: false, reason: `Prompt injection detected: ${label}` };
+        }
+    }
+    // --- 2. Suspicious encoding ---
+    for (const { re, label } of ENCODING_PATTERNS) {
+        if (re.test(content)) {
+            return { safe: false, reason: `Suspicious encoding: ${label}` };
+        }
+    }
+    // --- 3. Directive density ---
+    // Only check strings long enough to be meaningful (>20 words).
+    const words = content.split(/\s+/).filter(Boolean);
+    if (words.length > 20) {
+        const matches = content.match(DIRECTIVE_WORDS);
+        const density = (matches?.length ?? 0) / words.length;
+        if (density >= DIRECTIVE_DENSITY_THRESHOLD) {
+            return {
+                safe: false,
+                reason: `Excessive directive density (${(density * 100).toFixed(0)}% directive keywords)`,
+            };
+        }
+    }
+    return { safe: true };
+}
+//# sourceMappingURL=input-guards.js.map

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package/dist/src/utils/json-file.d.ts

@@ -0,0 +1,33 @@
+/**
+ * Shared atomic JSON file I/O utility.
+ *
+ * Previously duplicated across 10+ files with the same
+ * writeFileSync(tmp) + renameSync(tmp, path) pattern:
+ *   - mcp-tools/neural-tools.ts
+ *   - memory/intelligence.ts
+ *   - autopilot-state.ts
+ *   - commands/claims.ts
+ *   - commands/swarm.ts
+ *   - commands/neural-optimize.ts
+ *   - commands/neural-registry.ts
+ *   - commands/agent-lifecycle.ts
+ *   - commands/memory-admin.ts
+ *   - commands/memory-list.ts
+ *   - commands/security-cve.ts
+ *
+ * This is the single canonical implementation. Uses atomic
+ * rename to prevent partial writes on crash.
+ */
+/**
+ * Read and parse a JSON file. Returns `fallback` if file doesn't exist,
+ * exceeds maxBytes, or fails to parse.
+ */
+export declare function readJsonFileSync<T>(filePath: string, fallback: T, maxBytes?: number): T;
+/**
+ * Atomically write a JSON value to disk.
+ *
+ * Writes to a temporary file first (PID + timestamp suffix to avoid
+ * collisions), then renames into place. Ensures the directory exists.
+ */
+export declare function writeJsonFileAtomic(filePath: string, data: unknown, pretty?: boolean): void;
+//# sourceMappingURL=json-file.d.ts.map

package/dist/src/utils/json-file.d.ts.map

@@ -0,0 +1 @@
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