@monoes/monomindcli 1.18.15 → 2.0.0

package/.claude/agents/core/researcher.md

@@ -35,26 +35,29 @@ You are a research specialist focused on thorough investigation, pattern analysi
 
 ## Research Methodology
 
-### 1. Information Gathering
-- Use multiple search strategies (glob, grep, semantic search)
+### 1. Information Gathering (monograph-first)
+- **Always start with monograph** — call `monograph_query` or `monograph_suggest` before grep/find
+- Only fall back to grep/find if monograph returns 0 results or the DB is not built
 - Read relevant files completely for context
 - Check multiple locations for related information
-- Consider different naming conventions and patterns
 
 ### 2. Pattern Analysis
-```bash
-# Example search patterns
-- Implementation patterns: grep -r "class.*Controller" --include="*.ts"
-- Configuration patterns: glob "**/*.config.*"
-- Test patterns: grep -r "describe\|test\|it" --include="*.test.*"
-- Import patterns: grep -r "^import.*from" --include="*.ts"
+```
+# Preferred: monograph for symbol/definition lookups
+monograph_query({ query: "Controller" })           # find controller classes
+monograph_query({ query: "config" })                # find configuration patterns
+monograph_suggest({ task: "test patterns" })         # find test-related files
+
+# Fallback only (if monograph returns 0 results):
+grep -r "class.*Controller" --include="*.ts"
+grep -r "^import.*from" --include="*.ts"
 ```
 
 ### 3. Dependency Analysis
-- Track import statements and module dependencies
-- Identify external package dependencies
-- Map internal module relationships
-- Document API contracts and interfaces
+- **Use `monograph_neighbors` and `monograph_impact`** for dependency mapping
+- Call `monograph_god_nodes` for high-centrality files
+- Call `monograph_community` for module cluster boundaries
+- Fall back to grep on import statements only if monograph is unavailable
 
 ### 4. Documentation Mining
 - Extract inline comments and JSDoc
@@ -98,21 +101,23 @@ research_findings:
 
 ## Search Strategies
 
-### 1. Broad to Narrow
-```bash
-# Start broad
-glob "**/*.ts"
-# Narrow by pattern
+### 1. Monograph-First (preferred)
+```
+# Start with monograph for any symbol or code lookup
+monograph_query({ query: "symbol-name" })           # BM25 keyword search
+monograph_suggest({ task: "description of task" })   # ranked file suggestions
+monograph_neighbors({ name: "ClassName" })           # direct connections
+monograph_impact({ name: "functionName" })           # blast radius
+
+# Only if monograph returns 0 results or DB not built:
 grep -r "specific-pattern" --include="*.ts"
-# Focus on specific files
-read specific-file.ts
 ```
 
 ### 2. Cross-Reference
-- Search for class/function definitions
-- Find all usages and references
-- Track data flow through the system
-- Identify integration points
+- Use `monograph_neighbors` for usages and references
+- Use `monograph_shortest_path` to trace connections between modules
+- Use `monograph_context` for 360° view of a file
+- Fall back to grep only if monograph is unavailable
 
 ### 3. Historical Analysis
 - Review git history for context

package/.claude/agents/github/code-review-swarm.md

@@ -2,7 +2,7 @@
 name: code-review-swarm
 description: |
   Deploy specialized AI agents to perform comprehensive, intelligent code reviews that go beyond traditional static analysis
-tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, Bash, Read, Write, TodoWrite
+tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, Bash, Read, Write, TodoWrite
 ---
 
 # Code Review Swarm - Automated Code Review with AI Agents

package/.claude/agents/github/github-modes.md

@@ -2,7 +2,7 @@
 name: github-modes
 description: |
   Comprehensive GitHub integration modes for workflow orchestration, PR management, and repository coordination with batch optimization
-tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, Bash, TodoWrite, Read, Write
+tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, Bash, TodoWrite, Read, Write
 ---
 
 # GitHub Integration Modes

package/.claude/agents/github/issue-tracker.md

@@ -2,7 +2,7 @@
 name: issue-tracker
 description: |
   Intelligent issue management and project coordination with automated tracking, progress monitoring, and team coordination
-tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_store, Bash, TodoWrite, Read, Write
+tools: mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_store, Bash, TodoWrite, Read, Write
 ---
 
 # GitHub Issue Tracker
@@ -281,8 +281,6 @@ Updates will be posted automatically by swarm agents during implementation.
 ### Seamless integration with:
 - `/github pr-manager` - Link issues to pull requests
 - `/github release-manager` - Coordinate release issues
-- `/sparc orchestrator` - Complex project coordination
-- `/sparc tester` - Automated testing workflows
 
 ## Metrics and Analytics
 

package/.claude/agents/github/multi-repo-swarm.md

@@ -1,7 +1,7 @@
 ---
 name: multi-repo-swarm
 description: Cross-repository swarm orchestration for organization-wide automation and intelligent collaboration
-tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__swarm_status, mcp__monomind__memory_usage, mcp__monomind__github_repo_analyze, mcp__monomind__github_pr_manage, mcp__monomind__github_sync_coord, mcp__monomind__github_metrics
+tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__swarm_status, mcp__monomind__memory_usage, mcp__monomind__github_repo_analyze, mcp__monomind__github_pr_manage, mcp__monomind__github_sync_coord, mcp__monomind__github_metrics
 ---
 
 # Multi-Repo Swarm - Cross-Repository Swarm Orchestration

package/.claude/agents/github/pr-manager.md

@@ -2,7 +2,7 @@
 name: pr-manager
 description: |
   Comprehensive pull request management with swarm coordination for automated reviews, testing, and merge workflows
-tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__swarm_status, mcp__monomind__memory_store, mcp__monomind__github_pr_manage, mcp__monomind__github_code_review, mcp__monomind__github_metrics
+tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__swarm_status, mcp__monomind__memory_store, mcp__monomind__github_pr_manage, mcp__monomind__github_code_review, mcp__monomind__github_metrics
 ---
 
 # GitHub PR Manager
@@ -145,8 +145,6 @@ mcp__monomind__memory_store {
 - `/github issue-tracker` - For project coordination
 - `/github branch-manager` - For branch strategy
 - `/github ci-orchestrator` - For CI/CD integration
-- `/sparc reviewer` - For detailed code analysis
-- `/sparc tester` - For comprehensive testing
 
 ## Error Handling
 

package/.claude/agents/github/project-board-sync.md

@@ -2,7 +2,7 @@
 name: project-board-sync
 description: |
   Synchronize AI swarms with GitHub Projects for visual task management, progress tracking, and team coordination
-tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__swarm_status, mcp__monomind__memory_usage, mcp__monomind__github_repo_analyze, mcp__monomind__github_pr_manage, mcp__monomind__github_issue_track, mcp__monomind__github_metrics, mcp__monomind__workflow_create, mcp__monomind__workflow_execute
+tools: Bash, Read, Write, Edit, Glob, Grep, LS, TodoWrite, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__swarm_status, mcp__monomind__memory_usage, mcp__monomind__github_repo_analyze, mcp__monomind__github_pr_manage, mcp__monomind__github_issue_track, mcp__monomind__github_metrics, mcp__monomind__workflow_create, mcp__monomind__workflow_execute
 ---
 
 # Project Board Sync - GitHub Projects Integration

package/.claude/agents/github/release-manager.md

@@ -2,7 +2,7 @@
 name: release-manager
 description: |
   Automated release coordination and deployment with Monomind swarm orchestration for seamless version management, testing, and deployment across multiple packages
-tools: Bash, Read, Write, Edit, TodoWrite, TodoRead, Task, WebFetch, mcp__github__create_pull_request, mcp__github__merge_pull_request, mcp__github__create_branch, mcp__github__push_files, mcp__github__create_issue, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_store
+tools: Bash, Read, Write, Edit, TodoWrite, TodoRead, Task, WebFetch, mcp__github__create_pull_request, mcp__github__merge_pull_request, mcp__github__create_branch, mcp__github__push_files, mcp__github__create_issue, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_store
 ---
 
 # GitHub Release Manager

package/.claude/agents/github/repo-architect.md

@@ -2,7 +2,7 @@
 name: repo-architect
 description: |
   Repository structure optimization and multi-repo management with Monomind swarm coordination for scalable project architecture and development workflows
-tools: Bash, Read, Write, Edit, LS, Glob, TodoWrite, TodoRead, Task, WebFetch, mcp__github__create_repository, mcp__github__fork_repository, mcp__github__search_repositories, mcp__github__push_files, mcp__github__create_or_update_file, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_store
+tools: Bash, Read, Write, Edit, LS, Glob, TodoWrite, TodoRead, Task, WebFetch, mcp__github__create_repository, mcp__github__fork_repository, mcp__github__search_repositories, mcp__github__push_files, mcp__github__create_or_update_file, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_store
 ---
 
 # GitHub Repository Architect
@@ -72,8 +72,8 @@ mcp__github__push_files {
       content: "[GitHub modes template]"
     },
     {
-      path: ".claude/commands/sparc/sparc-modes.md",
-      content: "[SPARC modes template]"
+      path: ".claude/commands/mastermind/help.md",
+      content: "[Mastermind commands template]"
     },
     {
       path: ".claude/settings.json",
@@ -116,7 +116,6 @@ npx monomind@latest mcp start
 
 ## Features
 - Monomind swarm coordination
-- SPARC development modes
 - GitHub workflow automation
 - Knowledge graph integration
 
@@ -270,16 +269,11 @@ monomind/
 │   │   ├── pr-manager.md
 │   │   ├── issue-tracker.md
 │   │   └── sync-coordinator.md
-│   ├── sparc/
-│   │   ├── sparc-modes.md
-│   │   ├── coder.md
-│   │   └── tester.md
 │   └── swarm/
 │       ├── coordination.md
 │       └── orchestration.md
 ├── agents/
-│   ├── github/
-│   └── sparc/
+│   └── github/
 └── settings.json
 ```
 
@@ -355,5 +349,3 @@ const integrationPattern = {
 
 - `/github sync-coordinator` - For cross-repo synchronization
 - `/github release-manager` - For coordinated releases
-- `/sparc architect` - For detailed architecture design
-- `/sparc optimizer` - For performance optimization

package/.claude/agents/github/swarm-issue.md

@@ -2,7 +2,7 @@
 name: swarm-issue
 description: |
   GitHub issue-based swarm coordination agent that transforms issues into intelligent multi-agent tasks with automatic decomposition and progress tracking
-tools: mcp__github__get_issue, mcp__github__create_issue, mcp__github__update_issue, mcp__github__list_issues, mcp__github__create_issue_comment, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_usage, TodoWrite, TodoRead, Bash, Grep, Read, Write
+tools: mcp__github__get_issue, mcp__github__create_issue, mcp__github__update_issue, mcp__github__list_issues, mcp__github__create_issue_comment, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_usage, TodoWrite, TodoRead, Bash, Grep, Read, Write
 ---
 
 # Swarm Issue - Issue-Based Swarm Coordination

package/.claude/agents/github/swarm-pr.md

@@ -2,7 +2,7 @@
 name: swarm-pr
 description: |
   Pull request swarm management agent that coordinates multi-agent code review, validation, and integration workflows with automated PR lifecycle management
-tools: mcp__github__get_pull_request, mcp__github__create_pull_request, mcp__github__update_pull_request, mcp__github__list_pull_requests, mcp__github__create_pr_comment, mcp__github__get_pr_diff, mcp__github__merge_pull_request, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_usage, mcp__monomind__coordination_sync, TodoWrite, TodoRead, Bash, Grep, Read, Write, Edit
+tools: mcp__github__get_pull_request, mcp__github__create_pull_request, mcp__github__update_pull_request, mcp__github__list_pull_requests, mcp__github__create_pr_comment, mcp__github__get_pr_diff, mcp__github__merge_pull_request, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_usage, mcp__monomind__coordination_sync, TodoWrite, TodoRead, Bash, Grep, Read, Write, Edit
 ---
 
 # Swarm PR - Managing Swarms through Pull Requests

package/.claude/agents/github/sync-coordinator.md

@@ -2,7 +2,7 @@
 name: sync-coordinator
 description: |
   Multi-repository synchronization coordinator that manages version alignment, dependency synchronization, and cross-package integration with intelligent swarm orchestration
-tools: mcp__github__push_files, mcp__github__create_or_update_file, mcp__github__get_file_contents, mcp__github__create_pull_request, mcp__github__search_repositories, mcp__github__list_repositories, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_store, mcp__monomind__coordination_sync, mcp__monomind__load_balance, TodoWrite, TodoRead, Bash, Read, Write, Edit, MultiEdit
+tools: mcp__github__push_files, mcp__github__create_or_update_file, mcp__github__get_file_contents, mcp__github__create_pull_request, mcp__github__search_repositories, mcp__github__list_repositories, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_store, mcp__monomind__coordination_sync, mcp__monomind__load_balance, TodoWrite, TodoRead, Bash, Read, Write, Edit, MultiEdit
 ---
 
 # GitHub Sync Coordinator

package/.claude/agents/github/workflow-automation.md

@@ -2,7 +2,7 @@
 name: workflow-automation
 description: |
   GitHub Actions workflow automation agent that creates intelligent, self-organizing CI/CD pipelines with adaptive multi-agent coordination and automated optimization
-tools: mcp__github__create_workflow, mcp__github__update_workflow, mcp__github__list_workflows, mcp__github__get_workflow_runs, mcp__github__create_workflow_dispatch, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__task_orchestrate, mcp__monomind__memory_usage, mcp__monomind__performance_report, mcp__monomind__bottleneck_analyze, mcp__monomind__workflow_create, mcp__monomind__automation_setup, TodoWrite, TodoRead, Bash, Read, Write, Edit, Grep
+tools: mcp__github__create_workflow, mcp__github__update_workflow, mcp__github__list_workflows, mcp__github__get_workflow_runs, mcp__github__create_workflow_dispatch, mcp__monomind__swarm_init, mcp__monomind__agent_spawn, mcp__monomind__memory_usage, mcp__monomind__performance_report, mcp__monomind__bottleneck_analyze, mcp__monomind__workflow_create, mcp__monomind__automation_setup, TodoWrite, TodoRead, Bash, Read, Write, Edit, Grep
 ---
 
 # Workflow Automation - GitHub Actions Integration

package/.claude/agents/goal/goal-planner.md

@@ -87,7 +87,7 @@ Advanced action definitions with tool groups:
 Action: analyze_codebase
   Preconditions: {repository_accessible: true}
   Effects: {code_analyzed: true, metrics_available: true}
-  Tools: [grep, ast_parser, complexity_analyzer]
+  Tools: [monograph_query, monograph_suggest, grep (fallback), ast_parser, complexity_analyzer]
   Execution: hybrid (LLM for insights, code for metrics)
   Cost: 2
   Fallback: manual_review if tools unavailable
@@ -140,7 +140,6 @@ When handling requests:
 Integration with Monomind:
 - Coordinate with other specialized agents for specific actions
 - Use swarm coordination for parallel action execution
-- Leverage SPARC methodology for structured development tasks
 - Apply concurrent execution patterns from CLAUDE.md
 
 Advanced swarm coordination patterns:

package/.claude/agents/specialized/specialized-workflow-architect.md

@@ -440,27 +440,24 @@ Use this when joining a new project or auditing an existing system:
 
 ### Step 0: Discovery Pass (always first)
 
-Before designing anything, discover what already exists:
+Before designing anything, discover what already exists. **Use monograph first** — fall back to grep only if monograph returns 0 results or the DB is not built.
+
+```
+# PREFERRED: monograph-based discovery
+monograph_query({ query: "route handler" })          # find all route entry points
+monograph_query({ query: "worker job consumer" })    # find background processors
+monograph_query({ query: "state transition status" })# find state machines
+monograph_route_map({})                              # list all HTTP routes with handlers
+monograph_suggest({ task: "workflow entry points, workers, state machines, cron jobs" })
+```
 
 ```bash
-# Find all workflow entry points (adapt patterns to your framework)
+# FALLBACK (only if monograph returns 0 results):
 grep -rn "router\.\(post\|put\|delete\|get\|patch\)" src/routes/ --include="*.ts" --include="*.js"
 grep -rn "@app\.\(route\|get\|post\|put\|delete\)" src/ --include="*.py"
-grep -rn "HandleFunc\|Handle(" cmd/ pkg/ --include="*.go"
-
-# Find all background workers / job processors
 find src/ -type f -name "*worker*" -o -name "*job*" -o -name "*consumer*" -o -name "*processor*"
-
-# Find all state transitions in the codebase
 grep -rn "status.*=\|\.status\s*=\|state.*=\|\.state\s*=" src/ --include="*.ts" --include="*.py" --include="*.go" | grep -v "test\|spec\|mock"
-
-# Find all database migrations
 find . -path "*/migrations/*" -type f | head -30
-
-# Find all infrastructure resources
-find . -name "*.tf" -o -name "docker-compose*.yml" -o -name "*.yaml" | xargs grep -l "resource\|service:" 2>/dev/null
-
-# Find all scheduled / cron jobs
 grep -rn "cron\|schedule\|setInterval\|@Scheduled" src/ --include="*.ts" --include="*.py" --include="*.go" --include="*.java"
 ```
 

package/.claude/agents/testing/production-validator.md

@@ -245,17 +245,18 @@ describe('Performance Validation', () => {
 
 ### 1. Code Quality Validation
 
+**Preferred: monograph-based code quality scan:**
+```
+monograph_query({ query: "mock fake stub" })         # find mock implementations in prod code
+monograph_query({ query: "TODO FIXME" })             # find unfinished work in critical paths
+monograph_query({ query: "console log warn error" }) # find console statements
+```
+
+**Fallback (if monograph returns 0 results or DB not built):**
 ```bash
-# No mock implementations in production code
 grep -r "mock\|fake\|stub" src/ --exclude-dir=__tests__ --exclude="*.test.*" --exclude="*.spec.*"
-
-# No TODO/FIXME in critical paths
 grep -r "TODO\|FIXME" src/ --exclude-dir=__tests__
-
-# No hardcoded test data
 grep -r "test@\|example\|localhost" src/ --exclude-dir=__tests__
-
-# No console.log statements
 grep -r "console\." src/ --exclude-dir=__tests__
 ```
 

package/.claude/agents/testing/testing-evidence-collector.md

@@ -47,7 +47,9 @@ You are **EvidenceQA**, a skeptical QA specialist who requires visual proof for
 # 2. Check what's actually built
 ls -la resources/views/ || ls -la *.html
 
-# 3. Reality check for claimed features  
+# 3. Reality check for claimed features (monograph-first, grep fallback)
+# Preferred: monograph_query({ query: "luxury premium glass morphism" })
+# Fallback:
 grep -r "luxury\|premium\|glass\|morphism" . --include="*.html" --include="*.css" --include="*.blade.php" || echo "NO PREMIUM FEATURES FOUND"
 
 # 4. Review comprehensive test results

package/.claude/commands/github/issue-tracker.md

@@ -275,8 +275,6 @@ Generated with Claude Code
 ### Seamless integration with:
 - `/github pr-manager` - Link issues to pull requests
 - `/github release-manager` - Coordinate release issues
-- `/sparc orchestrator` - Complex project coordination
-- `/sparc tester` - Automated testing workflows
 
 ## Metrics and Analytics
 

package/.claude/commands/github/pr-manager.md

@@ -155,8 +155,6 @@ mcp__monomind__memory_store {
 - `/github issue-tracker` - For project coordination
 - `/github branch-manager` - For branch strategy
 - `/github ci-orchestrator` - For CI/CD integration
-- `/sparc reviewer` - For detailed code analysis
-- `/sparc tester` - For comprehensive testing
 
 ## Error Handling
 

package/.claude/commands/github/repo-architect.md

@@ -78,8 +78,8 @@ mcp__github__push_files {
       content: "[GitHub modes template]"
     },
     {
-      path: ".claude/commands/sparc/sparc-modes.md",
-      content: "[SPARC modes template]"
+      path: ".claude/commands/mastermind/help.md",
+      content: "[Mastermind commands template]"
     },
     {
       path: ".claude/config.json",
@@ -121,14 +121,13 @@ mcp__github__push_files {
 
 ## Quick Start
 \`\`\`bash
-npx monomind init --sparc
+npx monomind init
 npm install
 npx monomind start --ui
 \`\`\`
 
 ## Features
 - Monomind swarm integration
-- SPARC development modes
 - GitHub workflow automation
 - Advanced coordination capabilities
 
@@ -280,10 +279,6 @@ monomind/
 │   │   ├── pr-manager.md
 │   │   ├── issue-tracker.md
 │   │   └── sync-coordinator.md
-│   ├── sparc/
-│   │   ├── sparc-modes.md
-│   │   ├── coder.md
-│   │   └── tester.md
 │   └── swarm/
 │       ├── coordination.md
 │       └── orchestration.md
@@ -368,8 +363,6 @@ const integrationPattern = {
 
 - `/github sync-coordinator` - For cross-repo synchronization
 - `/github release-manager` - For coordinated releases
-- `/sparc architect` - For detailed architecture design
-- `/sparc optimizer` - For performance optimization
 
 ### Workflow Enhancement:
 

package/.claude/commands/mastermind/code-review.md

@@ -66,10 +66,10 @@ Based on `STACK`, determine which specialist agents to run beyond the always-on
 - `Security Engineer` — injection, auth gaps, secrets exposure, CVE-prone patterns, OWASP Top 10
 - `Reality Checker` — evidence-based assessment: does the code actually do what it claims?
 
-**Run conditionally** — detect by running these checks and adding the agent if exit 0:
-- `Accessibility Auditor` — `find . -maxdepth 5 \( -name "*.html" -o -name "*.jsx" -o -name "*.tsx" \) -not -path "*/node_modules/*" | head -1 | grep -q .`
-- `API Tester` — `find . -maxdepth 5 \( -name "*.route.*" -o -name "openapi.yml" -o -name "openapi.json" -o -name "swagger.*" \) -not -path "*/node_modules/*" | head -1 | grep -q . || grep -rqEl "express\(|fastify|hono|koa|router\." --include="*.ts" --include="*.js" . 2>/dev/null`
-- `Database Optimizer` — `find . -maxdepth 5 \( -name "*.sql" -o -name "*migration*" -o -name "*schema*" \) -not -path "*/node_modules/*" | head -1 | grep -q . || grep -rqEl "prisma|typeorm|sequelize|drizzle|knex" --include="*.ts" --include="*.js" . 2>/dev/null`
+**Run conditionally** — use `monograph_query` first to detect stack; fall back to find/grep if monograph returns 0 results:
+- `Accessibility Auditor` — `monograph_query({ query: "html jsx tsx component" })` or `find . -maxdepth 5 \( -name "*.html" -o -name "*.jsx" -o -name "*.tsx" \) -not -path "*/node_modules/*" | head -1 | grep -q .`
+- `API Tester` — `monograph_query({ query: "express fastify hono koa router route openapi swagger" })` or `find . -maxdepth 5 \( -name "*.route.*" -o -name "openapi.yml" -o -name "openapi.json" -o -name "swagger.*" \) -not -path "*/node_modules/*" | head -1 | grep -q . || grep -rqEl "express\(|fastify|hono|koa|router\." --include="*.ts" --include="*.js" . 2>/dev/null`
+- `Database Optimizer` — `monograph_query({ query: "prisma typeorm sequelize drizzle knex sql migration schema" })` or `find . -maxdepth 5 \( -name "*.sql" -o -name "*migration*" -o -name "*schema*" \) -not -path "*/node_modules/*" | head -1 | grep -q . || grep -rqEl "prisma|typeorm|sequelize|drizzle|knex" --include="*.ts" --include="*.js" . 2>/dev/null`
 - `SRE` — `find . -maxdepth 3 \( -name "Dockerfile" -o -name "docker-compose*" -o -name "*.yml" -path "*/.github/workflows/*" \) | head -1 | grep -q .`
 - `Mobile App Builder` — `find . -maxdepth 3 \( -name "*.swift" -o -name "*.kt" \) | head -1 | grep -q . || grep -q "react-native" package.json 2>/dev/null`
 

package/.claude/commands/mastermind/help.md

@@ -57,8 +57,8 @@ npx monomind monograph search -q "authentication"
 npx monomind monograph stats
 
 # Pattern logging
-npx monomind neural patterns --action list
-npx monomind neural status --verbose
+npx monomind hooks intelligence patterns --action list
+npx monomind hooks intelligence status --verbose
 
 # Hooks
 npx monomind hooks pre-task --description "task description"
@@ -78,7 +78,7 @@ npx monomind performance benchmark --suite all
 
 ## Built-in Workflow Templates
 
-`development`, `research`, `testing`, `security-audit`, `code-review`, `refactoring`, `sparc`, `custom`
+`development`, `research`, `testing`, `security-audit`, `code-review`, `refactoring`, `custom`
 
 ## Swarm Topologies
 
@@ -97,8 +97,8 @@ mcp__monomind__memory_store({ key: "...", value: "...", namespace: "..." })
 mcp__monomind__memory_search({ query: "...", namespace: "..." })
 
 // Knowledge graph
-mcp__monomind__graphify_suggest({ task: "..." })
-mcp__monomind__graphify_query({ query: "..." })
+mcp__monomind__monograph_suggest({ task: "..." })
+mcp__monomind__monograph_query({ query: "..." })
 
 // Swarm
 mcp__monomind__swarm_init({ topology: "hierarchical", maxAgents: 8, strategy: "specialized" })

package/.claude/commands/mastermind/okf-export.md

@@ -0,0 +1,14 @@
+<!-- Export the Second Brain knowledge base as a portable OKF (Open Knowledge Format) bundle. -->
+
+Parse `$ARGUMENTS` for:
+- `--output <dir>` or `-o <dir>` → output directory (default: `.monomind/knowledge-export`)
+- `--scope <name>` or `-s <name>` → knowledge scope (default: `shared`)
+- Remaining positional arg → treated as output directory
+
+Run the export:
+
+```bash
+npx monomind doc export -o "<output_dir>" -s "<scope>"
+```
+
+After completion, report what was exported and where. If 0 documents exported, suggest `monomind doc ingest <path>` first.

package/.claude/commands/mastermind/okf-import.md

@@ -0,0 +1,15 @@
+<!-- Import an OKF (Open Knowledge Format) bundle into the Second Brain knowledge base. -->
+
+Parse `$ARGUMENTS` for:
+- `--scope <name>` or `-s <name>` → knowledge scope (default: `shared`)
+- Remaining positional arg → bundle directory path (REQUIRED)
+
+If no bundle directory provided, ask: "Which directory contains the OKF bundle to import?"
+
+Run the import:
+
+```bash
+npx monomind doc ingest "<bundle_dir>" -s "<scope>"
+```
+
+After completion, report files processed, chunks indexed, and any errors. If the bundle directory doesn't exist or contains no `.md` files, say so.

package/.claude/commands/workflows/README.md

@@ -51,7 +51,6 @@ npx monomind workflow template create --name "my-workflow"
 | `security-audit` | Threat Model → Static → Dynamic → Report | security-architect, auditor |
 | `code-review` | Initial → Security → Quality → Feedback | reviewer, auditor, analyst |
 | `refactoring` | Analysis → Planning → Refactor → Validation | architect, coder, reviewer |
-| `sparc` | Spec → Pseudocode → Architecture → Refinement → Completion | architect, coder, tester, reviewer |
 | `custom` | Define your own stages | configurable |
 
 ## MCP Tools

package/.claude/commands/workflows/workflow-create.md

@@ -29,7 +29,6 @@ npx monomind workflow template list
 
 # Show a specific template's stages and agents
 npx monomind workflow template show development
-npx monomind workflow template show sparc
 ```
 
 ## Template Create Flags

package/.claude/commands/workflows/workflow-execute.md

@@ -1,6 +1,6 @@
 ---
 name: workflows:workflow-execute
-description: Run multi-agent workflows using built-in templates (development, research, testing, sparc, security-audit, etc.) via real npx monomind workflow run CLI
+description: Run multi-agent workflows using built-in templates (development, research, testing, security-audit, etc.) via real npx monomind workflow run CLI
 ---
 
 # Workflow Execute
@@ -23,7 +23,6 @@ npx monomind workflow run -t development --task "Build REST API with auth"
 npx monomind workflow run -t research --task "Analyze performance bottlenecks"
 npx monomind workflow run -t testing
 npx monomind workflow run -t security-audit
-npx monomind workflow run -t sparc --task "New payment module"
 
 # Run from a workflow file
 npx monomind workflow run -f ./workflow.yaml
@@ -55,7 +54,6 @@ npx monomind workflow run -t development --dry-run
 | `security-audit` | Threat Model → Static → Dynamic → Report | security-architect, auditor |
 | `code-review` | Initial → Security → Quality → Feedback | reviewer, auditor, analyst |
 | `refactoring` | Analysis → Planning → Refactor → Validation | architect, coder, reviewer |
-| `sparc` | Spec → Pseudocode → Architecture → Refinement → Completion | architect, coder, tester, reviewer |
 | `custom` | Define your own | configurable |
 
 ## MCP Tools

package/.claude/commands/workflows/workflow-export.md

@@ -23,7 +23,6 @@ npx monomind workflow template list
 
 # Show details for a specific template (stages, agents, estimated duration)
 npx monomind workflow template show development
-npx monomind workflow template show sparc
 npx monomind workflow template show security-audit
 
 # Validate a custom workflow file
@@ -45,7 +44,6 @@ npx monomind workflow list --status all
 | `security-audit` | Threat Model → Static → Dynamic → Report | 20-40 min |
 | `code-review` | Initial → Security → Quality → Feedback | 10-25 min |
 | `refactoring` | Analysis → Planning → Refactor → Validation | 15-35 min |
-| `sparc` | Spec → Pseudocode → Architecture → Refinement → Completion | 25-45 min |
 | `custom` | Define your own stages | varies |
 
 ## MCP Tools