@monoes/monograph 1.4.0 → 1.5.0

package/dist/src/pipeline/phases/bridge-adapters/registry.js

@@ -0,0 +1,13 @@
+import { wailsAdapter } from './wails.js';
+import { tauriAdapter } from './tauri.js';
+import { electronIpcAdapter } from './electron-ipc.js';
+// Every adapter here has an unambiguous detect() signal (a generated binding
+// path, or a framework-specific call shape that only appears when its
+// framework is actually in use) — so all run unconditionally; detect() is
+// what keeps the no-op cost near zero for repos that don't use any of them.
+export const BUILTIN_BRIDGE_ADAPTERS = [
+    wailsAdapter,
+    tauriAdapter,
+    electronIpcAdapter,
+];
+//# sourceMappingURL=registry.js.map

package/dist/src/pipeline/phases/bridge-adapters/registry.js.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-adapters/tauri.d.ts

@@ -0,0 +1,10 @@
+import type { BridgeAdapter } from './types.js';
+/**
+ * Tauri (Rust <-> JS/TS): a `#[tauri::command]`-annotated Rust fn is invoked
+ * from the frontend by name via `invoke("name", ...)` — a string-literal
+ * match, not a generated file. The Rust side already has a real Function
+ * node (from the Rust extractor); the JS/TS call site does not, so it's
+ * attached to its containing File node.
+ */
+export declare const tauriAdapter: BridgeAdapter;
+//# sourceMappingURL=tauri.d.ts.map

package/dist/src/pipeline/phases/bridge-adapters/tauri.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"tauri.d.ts","sourceRoot":"","sources":["../../../../../src/pipeline/phases/bridge-adapters/tauri.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,aAAa,EAAkB,MAAM,YAAY,CAAC;AA0BhE;;;;;;GAMG;AACH,eAAO,MAAM,YAAY,EAAE,aAkE1B,CAAC"}

package/dist/src/pipeline/phases/bridge-adapters/tauri.js

@@ -0,0 +1,104 @@
+import { statSync, readFileSync } from 'fs';
+import { join, extname } from 'path';
+const RUST_EXT = new Set(['.rs']);
+const JS_TS_EXT = new Set(['.js', '.jsx', '.ts', '.tsx', '.mjs', '.cjs']);
+/** `#[tauri::command]` (with or without args) directly above an fn declaration. */
+const TAURI_COMMAND_RE = /#\[tauri::command(?:\([^)]*\))?\]\s*(?:pub(?:\([^)]*\))?\s+)?(?:async\s+)?fn\s+(\w+)/g;
+/**
+ * Tauri's `invoke(...)` call from the JS/TS side, e.g.
+ * `import { invoke } from '@tauri-apps/api/core'; invoke('my_command', {...})`.
+ * We don't verify the import — matching the call shape is enough signal here,
+ * same tradeoff extractor.ts already makes for plain call-site regexes.
+ */
+const TAURI_INVOKE_RE = /\binvoke\(\s*['"]([^'"]+)['"]/g;
+function safeReadSource(absPath, maxBytes) {
+    try {
+        const stat = statSync(absPath);
+        if (stat.size > maxBytes)
+            return undefined;
+        return readFileSync(absPath, 'utf-8');
+    }
+    catch {
+        return undefined;
+    }
+}
+/**
+ * Tauri (Rust <-> JS/TS): a `#[tauri::command]`-annotated Rust fn is invoked
+ * from the frontend by name via `invoke("name", ...)` — a string-literal
+ * match, not a generated file. The Rust side already has a real Function
+ * node (from the Rust extractor); the JS/TS call site does not, so it's
+ * attached to its containing File node.
+ */
+export const tauriAdapter = {
+    name: 'tauri',
+    // A bare .rs file isn't a Tauri signal by itself (a repo can have unrelated
+    // Rust code alongside a JS/TS frontend) — require an actual
+    // #[tauri::command] annotation before this adapter runs at all.
+    detect(ctx, filePaths) {
+        for (const relPath of filePaths) {
+            if (!RUST_EXT.has(extname(relPath)))
+                continue;
+            const source = safeReadSource(join(ctx.repoPath, relPath), ctx.options.maxFileSizeBytes);
+            if (!source)
+                continue;
+            TAURI_COMMAND_RE.lastIndex = 0;
+            if (TAURI_COMMAND_RE.test(source))
+                return true;
+        }
+        return false;
+    },
+    findDefinitions(ctx, filePaths) {
+        const endpoints = [];
+        for (const relPath of filePaths) {
+            if (!RUST_EXT.has(extname(relPath)))
+                continue;
+            const source = safeReadSource(join(ctx.repoPath, relPath), ctx.options.maxFileSizeBytes);
+            if (!source)
+                continue;
+            TAURI_COMMAND_RE.lastIndex = 0;
+            let m;
+            const names = [];
+            while ((m = TAURI_COMMAND_RE.exec(source)) !== null)
+                names.push(m[1]);
+            if (names.length === 0)
+                continue;
+            const rows = ctx.db
+                .prepare(`SELECT id, name FROM nodes WHERE label = 'Function' AND language = 'rust' AND file_path = ?`)
+                .all(relPath);
+            const byName = new Map(rows.map((r) => [r.name, r.id]));
+            for (const name of names) {
+                const nodeId = byName.get(name);
+                if (nodeId)
+                    endpoints.push({ key: name, nodeId, language: 'rust' });
+            }
+        }
+        return endpoints;
+    },
+    findCallSites(ctx, filePaths) {
+        const endpoints = [];
+        for (const relPath of filePaths) {
+            if (!JS_TS_EXT.has(extname(relPath)))
+                continue;
+            const source = safeReadSource(join(ctx.repoPath, relPath), ctx.options.maxFileSizeBytes);
+            if (!source)
+                continue;
+            TAURI_INVOKE_RE.lastIndex = 0;
+            let m;
+            const commandNames = [];
+            while ((m = TAURI_INVOKE_RE.exec(source)) !== null)
+                commandNames.push(m[1]);
+            if (commandNames.length === 0)
+                continue;
+            const fileRow = ctx.db
+                .prepare(`SELECT id FROM nodes WHERE label = 'File' AND file_path = ?`)
+                .get(relPath);
+            if (!fileRow)
+                continue;
+            for (const name of commandNames) {
+                endpoints.push({ key: name, nodeId: fileRow.id, language: 'javascript' });
+            }
+        }
+        return endpoints;
+    },
+};
+//# sourceMappingURL=tauri.js.map

package/dist/src/pipeline/phases/bridge-adapters/tauri.js.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-adapters/types.d.ts

@@ -0,0 +1,30 @@
+import type { PipelineContext } from '../../types.js';
+/**
+ * One side of a cross-language bridge boundary — a definition (the thing being
+ * exposed across the boundary) or a call site (the thing invoking across it).
+ * `key` is the string both sides are matched on: an exact symbol name for
+ * codegen-based bridges (Wails, wasm-bindgen), or a string-literal channel/
+ * command name for registration-based bridges (Tauri, Electron IPC).
+ */
+export interface BridgeEndpoint {
+    key: string;
+    nodeId: string;
+    language: string;
+}
+/**
+ * A cross-language bridge adapter. Each adapter independently extracts
+ * (key, nodeId) pairs from both sides of one specific FFI/IPC/RPC boundary;
+ * the bridge-resolver phase matches them by key and emits CALLS edges.
+ *
+ * `detect` must be cheap — it runs for every adapter on every build, so an
+ * adapter whose framework isn't present in the repo should bail out fast
+ * (e.g. checking file paths already collected by the scan phase) rather than
+ * re-reading the filesystem.
+ */
+export interface BridgeAdapter {
+    name: string;
+    detect(ctx: PipelineContext, filePaths: string[]): boolean;
+    findDefinitions(ctx: PipelineContext, filePaths: string[]): BridgeEndpoint[];
+    findCallSites(ctx: PipelineContext, filePaths: string[]): BridgeEndpoint[];
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/src/pipeline/phases/bridge-adapters/types.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-adapters/types.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=types.js.map

package/dist/src/pipeline/phases/bridge-adapters/types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../../../../src/pipeline/phases/bridge-adapters/types.ts"],"names":[],"mappings":""}

package/dist/src/pipeline/phases/bridge-adapters/wails.d.ts

@@ -0,0 +1,10 @@
+import type { BridgeAdapter } from './types.js';
+/**
+ * Wails (Go <-> JS/TS): `wails` generates a JS/TS binding file per bound Go
+ * struct at `frontend/**\/wailsjs/go/<package>/<Struct>.js`, exporting one
+ * function per Go method with the exact same name. Both sides are already
+ * parsed into real Function/Method nodes by the Go and TS/JS extractors —
+ * this adapter just links them by name across the language boundary.
+ */
+export declare const wailsAdapter: BridgeAdapter;
+//# sourceMappingURL=wails.d.ts.map

package/dist/src/pipeline/phases/bridge-adapters/wails.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-adapters/wails.js

@@ -0,0 +1,27 @@
+const WAILS_BINDING_RE = /wailsjs\/go\//i;
+/**
+ * Wails (Go <-> JS/TS): `wails` generates a JS/TS binding file per bound Go
+ * struct at `frontend/**\/wailsjs/go/<package>/<Struct>.js`, exporting one
+ * function per Go method with the exact same name. Both sides are already
+ * parsed into real Function/Method nodes by the Go and TS/JS extractors —
+ * this adapter just links them by name across the language boundary.
+ */
+export const wailsAdapter = {
+    name: 'wails',
+    detect(_ctx, filePaths) {
+        return filePaths.some((p) => WAILS_BINDING_RE.test(p));
+    },
+    findDefinitions(ctx) {
+        const rows = ctx.db
+            .prepare(`SELECT id, name, language FROM nodes WHERE label = 'Method' AND language = 'go' AND file_path IS NOT NULL`)
+            .all();
+        return rows.map((r) => ({ key: r.name, nodeId: r.id, language: r.language }));
+    },
+    findCallSites(ctx) {
+        const rows = ctx.db
+            .prepare(`SELECT id, name, language, file_path FROM nodes WHERE label = 'Function' AND file_path LIKE '%wailsjs/go/%'`)
+            .all();
+        return rows.map((r) => ({ key: r.name, nodeId: r.id, language: r.language ?? 'javascript' }));
+    },
+};
+//# sourceMappingURL=wails.js.map

package/dist/src/pipeline/phases/bridge-adapters/wails.js.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-resolver.d.ts

@@ -0,0 +1,23 @@
+import type { PipelinePhase } from '../types.js';
+export interface BridgeResolverOutput {
+    edgesCreated: number;
+}
+/**
+ * Cross-language bridge resolution — links calls across an FFI/IPC boundary
+ * that no single language's own import/call resolution can see (Wails'
+ * generated Go<->JS bindings, Tauri's invoke() commands, Electron's IPC
+ * channels, ...). Each adapter in bridge-adapters/ extracts (key, nodeId)
+ * pairs from both sides; here they're matched by key and turned into CALLS
+ * edges — reusing the existing relation so every existing consumer
+ * (monograph_impact, monograph_neighbors, community detection) picks them up
+ * with no changes on their end.
+ *
+ * Confidence is always INFERRED: a bridge edge is a name/key match, not an
+ * AST-verified call. A key with more than one matching definition is
+ * dropped rather than guessed at — the call site can't know which one was
+ * meant, and a wrong edge is worse than a missing one. Multiple call sites
+ * sharing one definition (the common case: several UI files calling the
+ * same bound method) is normal and always kept.
+ */
+export declare const bridgeResolverPhase: PipelinePhase<BridgeResolverOutput>;
+//# sourceMappingURL=bridge-resolver.d.ts.map

package/dist/src/pipeline/phases/bridge-resolver.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/phases/bridge-resolver.js

@@ -0,0 +1,70 @@
+import { makeId, CONFIDENCE_SCORE } from '../../types.js';
+import { insertEdges } from '../../storage/edge-store.js';
+import { BUILTIN_BRIDGE_ADAPTERS } from './bridge-adapters/registry.js';
+/**
+ * Cross-language bridge resolution — links calls across an FFI/IPC boundary
+ * that no single language's own import/call resolution can see (Wails'
+ * generated Go<->JS bindings, Tauri's invoke() commands, Electron's IPC
+ * channels, ...). Each adapter in bridge-adapters/ extracts (key, nodeId)
+ * pairs from both sides; here they're matched by key and turned into CALLS
+ * edges — reusing the existing relation so every existing consumer
+ * (monograph_impact, monograph_neighbors, community detection) picks them up
+ * with no changes on their end.
+ *
+ * Confidence is always INFERRED: a bridge edge is a name/key match, not an
+ * AST-verified call. A key with more than one matching definition is
+ * dropped rather than guessed at — the call site can't know which one was
+ * meant, and a wrong edge is worse than a missing one. Multiple call sites
+ * sharing one definition (the common case: several UI files calling the
+ * same bound method) is normal and always kept.
+ */
+export const bridgeResolverPhase = {
+    name: 'bridge-resolver',
+    deps: ['scan', 'structure', 'parse'],
+    async execute(ctx, deps) {
+        if (ctx.allFilesCached)
+            return { edgesCreated: 0 };
+        const { filePaths } = deps.get('scan');
+        const edges = [];
+        for (const adapter of BUILTIN_BRIDGE_ADAPTERS) {
+            if (!adapter.detect(ctx, filePaths))
+                continue;
+            const definitions = adapter.findDefinitions(ctx, filePaths);
+            const callSites = adapter.findCallSites(ctx, filePaths);
+            if (definitions.length === 0 || callSites.length === 0)
+                continue;
+            const definitionsByKey = new Map();
+            for (const def of definitions) {
+                const arr = definitionsByKey.get(def.key);
+                if (arr)
+                    arr.push(def);
+                else
+                    definitionsByKey.set(def.key, [def]);
+            }
+            for (const callSite of callSites) {
+                const matches = definitionsByKey.get(callSite.key);
+                if (!matches || matches.length !== 1)
+                    continue; // 0 or ambiguous — drop, don't guess
+                const target = matches[0];
+                if (target.nodeId === callSite.nodeId)
+                    continue; // same node on both sides — nothing to link
+                const id = makeId('bridge', adapter.name, callSite.nodeId, target.nodeId);
+                const languagePair = `${callSite.language} -> ${target.language}`;
+                edges.push({
+                    id,
+                    sourceId: callSite.nodeId,
+                    targetId: target.nodeId,
+                    relation: 'CALLS',
+                    confidence: 'INFERRED',
+                    confidenceScore: CONFIDENCE_SCORE.INFERRED,
+                    reason: `${adapter.name} bridge (${languagePair}): "${callSite.key}"`,
+                    evidence: [{ kind: 'bridge', weight: CONFIDENCE_SCORE.INFERRED, note: `${adapter.name}: ${languagePair}` }],
+                });
+            }
+        }
+        if (edges.length > 0)
+            insertEdges(ctx.db, edges);
+        return { edgesCreated: edges.length };
+    },
+};
+//# sourceMappingURL=bridge-resolver.js.map

package/dist/src/pipeline/phases/bridge-resolver.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"bridge-resolver.js","sourceRoot":"","sources":["../../../../src/pipeline/phases/bridge-resolver.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,MAAM,EAAE,gBAAgB,EAAE,MAAM,gBAAgB,CAAC;AAC1D,OAAO,EAAE,WAAW,EAAE,MAAM,6BAA6B,CAAC;AAE1D,OAAO,EAAE,uBAAuB,EAAE,MAAM,+BAA+B,CAAC;AAOxE;;;;;;;;;;;;;;;;GAgBG;AACH,MAAM,CAAC,MAAM,mBAAmB,GAAwC;IACtE,IAAI,EAAE,iBAAiB;IACvB,IAAI,EAAE,CAAC,MAAM,EAAE,WAAW,EAAE,OAAO,CAAC;IACpC,KAAK,CAAC,OAAO,CAAC,GAAG,EAAE,IAAI;QACrB,IAAI,GAAG,CAAC,cAAc;YAAE,OAAO,EAAE,YAAY,EAAE,CAAC,EAAE,CAAC;QAEnD,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,CAAe,CAAC;QACrD,MAAM,KAAK,GAAoB,EAAE,CAAC;QAElC,KAAK,MAAM,OAAO,IAAI,uBAAuB,EAAE,CAAC;YAC9C,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,GAAG,EAAE,SAAS,CAAC;gBAAE,SAAS;YAE9C,MAAM,WAAW,GAAG,OAAO,CAAC,eAAe,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;YAC5D,MAAM,SAAS,GAAG,OAAO,CAAC,aAAa,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;YACxD,IAAI,WAAW,CAAC,MAAM,KAAK,CAAC,IAAI,SAAS,CAAC,MAAM,KAAK,CAAC;gBAAE,SAAS;YAEjE,MAAM,gBAAgB,GAAG,IAAI,GAAG,EAA4B,CAAC;YAC7D,KAAK,MAAM,GAAG,IAAI,WAAW,EAAE,CAAC;gBAC9B,MAAM,GAAG,GAAG,gBAAgB,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;gBAC1C,IAAI,GAAG;oBAAE,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;;oBAClB,gBAAgB,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC;YAC5C,CAAC;YAED,KAAK,MAAM,QAAQ,IAAI,SAAS,EAAE,CAAC;gBACjC,MAAM,OAAO,GAAG,gBAAgB,CAAC,GAAG,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC;gBACnD,IAAI,CAAC,OAAO,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;oBAAE,SAAS,CAAC,qCAAqC;gBACrF,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,CAAE,CAAC;gBAC3B,IAAI,MAAM,CAAC,MAAM,KAAK,QAAQ,CAAC,MAAM;oBAAE,SAAS,CAAC,4CAA4C;gBAE7F,MAAM,EAAE,GAAG,MAAM,CAAC,QAAQ,EAAE,OAAO,CAAC,IAAI,EAAE,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBAC1E,MAAM,YAAY,GAAG,GAAG,QAAQ,CAAC,QAAQ,OAAO,MAAM,CAAC,QAAQ,EAAE,CAAC;gBAClE,KAAK,CAAC,IAAI,CAAC;oBACT,EAAE;oBACF,QAAQ,EAAE,QAAQ,CAAC,MAAM;oBACzB,QAAQ,EAAE,MAAM,CAAC,MAAM;oBACvB,QAAQ,EAAE,OAAO;oBACjB,UAAU,EAAE,UAAU;oBACtB,eAAe,EAAE,gBAAgB,CAAC,QAAQ;oBAC1C,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,YAAY,YAAY,OAAO,QAAQ,CAAC,GAAG,GAAG;oBACrE,QAAQ,EAAE,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,EAAE,gBAAgB,CAAC,QAAQ,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC,IAAI,KAAK,YAAY,EAAE,EAAE,CAAC;iBAC5G,CAAC,CAAC;YACL,CAAC;QACH,CAAC;QAED,IAAI,KAAK,CAAC,MAAM,GAAG,CAAC;YAAE,WAAW,CAAC,GAAG,CAAC,EAAE,EAAE,KAAK,CAAC,CAAC;QACjD,OAAO,EAAE,YAAY,EAAE,KAAK,CAAC,MAAM,EAAE,CAAC;IACxC,CAAC;CACF,CAAC"}

package/dist/src/pipeline/phases/cross-file.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cross-file.d.ts","sourceRoot":"","sources":["../../../../src/pipeline/phases/cross-file.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AACjD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AAMpD,MAAM,WAAW,eAAe;IAC9B,aAAa,EAAE,aAAa,EAAE,CAAC;CAChC;AAKD,eAAO,MAAM,cAAc,EAAE,aAAa,CAAC,eAAe,CAqDzD,CAAC"}
+{"version":3,"file":"cross-file.d.ts","sourceRoot":"","sources":["../../../../src/pipeline/phases/cross-file.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AACjD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AAOpD,MAAM,WAAW,eAAe;IAC9B,aAAa,EAAE,aAAa,EAAE,CAAC;CAChC;AAWD,eAAO,MAAM,cAAc,EAAE,aAAa,CAAC,eAAe,CA4FzD,CAAC"}

package/dist/src/pipeline/phases/cross-file.js

@@ -1,39 +1,82 @@
+import { readFileSync } from 'fs';
+import { join } from 'path';
 import { makeId, CONFIDENCE_SCORE } from '../../types.js';
 import { insertEdges } from '../../storage/edge-store.js';
+import { resolveModuleSpecifier, buildWorkspacePackageMap } from './scope-resolution.js';
+// Mirrors parsers/extractor.ts's re-export detection regex — used here to recover
+// the ORIGINAL specifier string behind a RE_EXPORTS edge's mangled placeholder id
+// (makeId('import', specifier) is lossy: '/' and '.' are collapsed to '_', so the
+// placeholder can't be reversed directly — we re-derive it from source instead).
+const RE_EXPORT_RE = /export\s+(?:\*|\{[^}]*\})\s+from\s+['"]([^'"]+)['"]/g;
 // monolean: IMPORTS name-matching removed — it matched import names against a
 // global symbol index (e.g. `import fs` → random Variable named `fs` in wrong file).
 // scope-resolution.ts now handles cross-file CALLS via source-parsed import maps.
 export const crossFilePhase = {
     name: 'cross-file',
     deps: ['parse', 'structure'],
-    async execute(_ctx, deps) {
+    async execute(ctx, deps) {
         const { allEdges } = deps.get('parse');
         const { fileNodes } = deps.get('structure');
-        function lastSegment(s) {
-            const idx = s.lastIndexOf('/');
-            return idx === -1 ? s : s.slice(idx + 1);
-        }
-        function targetBasename(rawId) {
-            const stripped = rawId.startsWith('import_') ? rawId.slice(7) : rawId;
-            return lastSegment(stripped);
-        }
-        const fileBasenameIndex = new Map();
-        for (const fileNode of fileNodes) {
-            const basename = lastSegment(fileNode.filePath ?? '').toLowerCase();
-            const dotIdx = basename.lastIndexOf('.');
-            const noExt = dotIdx === -1 ? basename : basename.slice(0, dotIdx);
-            fileBasenameIndex.set(basename, fileNode.id);
-            if (noExt !== basename)
-                fileBasenameIndex.set(noExt, fileNode.id);
-        }
+        const reExportEdges = allEdges.filter((e) => e.relation === 'RE_EXPORTS');
         const resolvedEdges = [];
-        for (const edge of allEdges) {
-            if (edge.relation === 'RE_EXPORTS') {
-                const basename = targetBasename(edge.targetId).toLowerCase();
-                const dotIdx = basename.lastIndexOf('.');
-                const noExt = dotIdx === -1 ? basename : basename.slice(0, dotIdx);
-                const resolvedId = fileBasenameIndex.get(basename) ?? fileBasenameIndex.get(noExt);
-                if (resolvedId && resolvedId !== edge.targetId) {
+        if (reExportEdges.length > 0) {
+            // fileId <-> filePath maps for resolving edge endpoints to real file nodes.
+            const fileIdToPath = new Map();
+            const knownFiles = new Set();
+            for (const fileNode of fileNodes) {
+                if (fileNode.filePath) {
+                    fileIdToPath.set(fileNode.id, fileNode.filePath);
+                    knownFiles.add(fileNode.filePath);
+                }
+            }
+            const filePathToId = new Map();
+            for (const [id, path] of fileIdToPath)
+                filePathToId.set(path, id);
+            const workspaceMap = buildWorkspacePackageMap(ctx.repoPath);
+            // Group by importing file so each source file is read at most once.
+            const edgesBySource = new Map();
+            for (const edge of reExportEdges) {
+                const arr = edgesBySource.get(edge.sourceId);
+                if (arr)
+                    arr.push(edge);
+                else
+                    edgesBySource.set(edge.sourceId, [edge]);
+            }
+            for (const [sourceId, edges] of edgesBySource) {
+                const filePath = fileIdToPath.get(sourceId);
+                if (!filePath)
+                    continue;
+                let source;
+                try {
+                    source = readFileSync(join(ctx.repoPath, filePath), 'utf-8');
+                }
+                catch {
+                    continue;
+                }
+                // Recover each `export * / { ... } from '<specifier>'` string, keyed by the
+                // same mangled placeholder id the extractor used (makeId('import', specifier))
+                // so it can be matched back to the corresponding edge.
+                const specifierByPlaceholder = new Map();
+                RE_EXPORT_RE.lastIndex = 0;
+                let m;
+                while ((m = RE_EXPORT_RE.exec(source)) !== null) {
+                    const specifier = m[1];
+                    specifierByPlaceholder.set(makeId('import', specifier), specifier);
+                }
+                for (const edge of edges) {
+                    const specifier = specifierByPlaceholder.get(edge.targetId);
+                    if (!specifier)
+                        continue;
+                    // Resolve relative to THIS importing file's own directory (reusing the
+                    // same resolver scope-resolution.ts uses for IMPORTS) instead of an
+                    // ambiguous global basename lookup that collides on repeated basenames
+                    // like index.ts / utils.ts across the repo.
+                    const resolvedPath = resolveModuleSpecifier(filePath, specifier, ctx.repoPath, knownFiles, workspaceMap);
+                    if (!resolvedPath)
+                        continue;
+                    const resolvedId = filePathToId.get(resolvedPath);
+                    if (!resolvedId || resolvedId === edge.targetId)
+                        continue;
                     resolvedEdges.push({
                         ...edge,
                         id: makeId(edge.sourceId, resolvedId, 'reexports_resolved'),
@@ -44,8 +87,8 @@ export const crossFilePhase = {
                 }
             }
         }
-        if (_ctx.db && resolvedEdges.length > 0) {
-            insertEdges(_ctx.db, resolvedEdges);
+        if (ctx.db && resolvedEdges.length > 0) {
+            insertEdges(ctx.db, resolvedEdges);
         }
         return { resolvedEdges };
     },

package/dist/src/pipeline/phases/cross-file.js.map

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package/dist/src/pipeline/phases/leiden.js.map

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package/dist/src/pipeline/phases/parse.d.ts.map

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