@monoes/monograph 1.0.0

package/dist/src/pipeline/phases/surprises.js

@@ -0,0 +1,54 @@
+const WEIGHTS = {
+    confidence: 0.30,
+    crossType: 0.20,
+    crossRepo: 0.15,
+    crossCommunity: 0.25,
+    peripheral: 0.10,
+};
+export const surprisesPhase = {
+    name: 'surprises',
+    deps: ['cross-file', 'communities', 'parse'],
+    async execute(_ctx, deps) {
+        const { allEdges, symbolNodes } = deps.get('parse');
+        const { resolvedEdges } = deps.get('cross-file');
+        const { memberships } = deps.get('communities');
+        const edges = [...allEdges, ...resolvedEdges];
+        const labelIndex = new Map(symbolNodes.map(n => [n.id, n.label]));
+        const inDeg = new Map();
+        for (const e of edges)
+            inDeg.set(e.targetId, (inDeg.get(e.targetId) ?? 0) + 1);
+        const maxDeg = Math.max(...inDeg.values(), 1);
+        const peripheralThreshold = maxDeg * 0.1;
+        const surprises = edges
+            .filter(e => e.confidence !== 'EXTRACTED')
+            .map(e => {
+            const reasons = [];
+            let score = 0;
+            const conf = 1 - e.confidenceScore;
+            score += WEIGHTS.confidence * conf;
+            if (conf > 0)
+                reasons.push(`${e.confidence} confidence`);
+            const srcLabel = labelIndex.get(e.sourceId);
+            const tgtLabel = labelIndex.get(e.targetId);
+            if (srcLabel && tgtLabel && srcLabel !== tgtLabel) {
+                score += WEIGHTS.crossType;
+                reasons.push(`cross-type (${srcLabel}→${tgtLabel})`);
+            }
+            const srcComm = memberships.get(e.sourceId);
+            const tgtComm = memberships.get(e.targetId);
+            if (srcComm !== undefined && tgtComm !== undefined && srcComm !== tgtComm) {
+                score += WEIGHTS.crossCommunity;
+                reasons.push('cross-community');
+            }
+            if ((inDeg.get(e.targetId) ?? 0) < peripheralThreshold) {
+                score += WEIGHTS.peripheral;
+                reasons.push('peripheral target');
+            }
+            return { edge: e, score, reasons };
+        })
+            .sort((a, b) => b.score - a.score)
+            .slice(0, 50);
+        return { surprises };
+    },
+};
+//# sourceMappingURL=surprises.js.map

package/dist/src/pipeline/phases/surprises.js.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/runner.d.ts

@@ -0,0 +1,8 @@
+import type { PipelinePhase, PipelineContext } from './types.js';
+export declare class PipelineRunner {
+    private readonly phases;
+    private readonly order;
+    constructor(phases: PipelinePhase<unknown>[]);
+    run(ctx: PipelineContext): Promise<Map<string, unknown>>;
+}
+//# sourceMappingURL=runner.d.ts.map

package/dist/src/pipeline/runner.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/runner.js

@@ -0,0 +1,53 @@
+import { MonographError } from '../types.js';
+export class PipelineRunner {
+    phases;
+    order;
+    constructor(phases) {
+        this.phases = phases;
+        this.order = topoSort(phases);
+    }
+    async run(ctx) {
+        const outputs = new Map();
+        const phaseMap = new Map(this.phases.map(p => [p.name, p]));
+        for (const name of this.order) {
+            const phase = phaseMap.get(name);
+            ctx.onProgress?.({ phase: name });
+            const output = await phase.execute(ctx, outputs);
+            outputs.set(name, output);
+        }
+        return outputs;
+    }
+}
+function topoSort(phases) {
+    const names = new Set(phases.map(p => p.name));
+    const inDegree = new Map();
+    const adjList = new Map();
+    for (const p of phases) {
+        inDegree.set(p.name, p.deps.length);
+        for (const dep of p.deps) {
+            if (!names.has(dep)) {
+                throw new MonographError(`Phase '${p.name}' depends on unknown phase '${dep}'`);
+            }
+            const adj = adjList.get(dep) ?? [];
+            adj.push(p.name);
+            adjList.set(dep, adj);
+        }
+    }
+    const queue = phases.filter(p => (inDegree.get(p.name) ?? 0) === 0).map(p => p.name);
+    const result = [];
+    while (queue.length) {
+        const name = queue.shift();
+        result.push(name);
+        for (const next of (adjList.get(name) ?? [])) {
+            const deg = (inDegree.get(next) ?? 0) - 1;
+            inDegree.set(next, deg);
+            if (deg === 0)
+                queue.push(next);
+        }
+    }
+    if (result.length !== phases.length) {
+        throw new MonographError('Cycle detected in pipeline phase graph');
+    }
+    return result;
+}
+//# sourceMappingURL=runner.js.map

package/dist/src/pipeline/runner.js.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/types.d.ts

@@ -0,0 +1,24 @@
+import type { MonographDb } from '../storage/db.js';
+import type { PipelineProgress } from '../types.js';
+import type Graph from 'graphology';
+export interface PipelineContext {
+    repoPath: string;
+    db: MonographDb;
+    graph: Graph;
+    onProgress: (p: PipelineProgress) => void;
+    options: PipelineOptions;
+}
+export interface PipelineOptions {
+    codeOnly: boolean;
+    maxFileSizeBytes: number;
+    workerPoolThreshold: number;
+    workerChunkBudgetBytes: number;
+    ignore: string[];
+}
+export declare const DEFAULT_OPTIONS: PipelineOptions;
+export interface PipelinePhase<TOutput> {
+    name: string;
+    deps: string[];
+    execute(ctx: PipelineContext, depOutputs: Map<string, unknown>): Promise<TOutput>;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/src/pipeline/types.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/pipeline/types.js

@@ -0,0 +1,8 @@
+export const DEFAULT_OPTIONS = {
+    codeOnly: false,
+    maxFileSizeBytes: 524288,
+    workerPoolThreshold: 15,
+    workerChunkBudgetBytes: 20971520,
+    ignore: [],
+};
+//# sourceMappingURL=types.js.map

package/dist/src/pipeline/types.js.map

@@ -0,0 +1 @@
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package/dist/src/storage/db.d.ts

@@ -0,0 +1,7 @@
+import Database from 'better-sqlite3';
+export type MonographDb = Database.Database;
+export declare function openDb(dbPath: string): MonographDb;
+export declare function closeDb(db: MonographDb): void;
+/** Write to a .tmp file then rename for atomic replacement. */
+export declare function atomicRebuild(dbPath: string, buildFn: (db: MonographDb) => void): void;
+//# sourceMappingURL=db.d.ts.map

package/dist/src/storage/db.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/storage/db.js

@@ -0,0 +1,52 @@
+import Database from 'better-sqlite3';
+import { mkdirSync, existsSync, renameSync, unlinkSync } from 'fs';
+import { dirname } from 'path';
+import { CREATE_NODES, CREATE_EDGES, CREATE_COMMUNITIES, CREATE_INDEX_META, CREATE_NODES_FTS, CREATE_INDEXES, FTS_SYNC_TRIGGERS, } from './schema.js';
+import { MonographError } from '../types.js';
+export function openDb(dbPath) {
+    try {
+        mkdirSync(dirname(dbPath), { recursive: true });
+        const db = new Database(dbPath);
+        db.pragma('journal_mode = WAL');
+        db.pragma('foreign_keys = ON');
+        applyMigrations(db);
+        return db;
+    }
+    catch (err) {
+        throw new MonographError(`Failed to open database at ${dbPath}`, err);
+    }
+}
+export function closeDb(db) {
+    db.close();
+}
+function applyMigrations(db) {
+    db.exec(CREATE_NODES);
+    db.exec(CREATE_EDGES);
+    db.exec(CREATE_COMMUNITIES);
+    db.exec(CREATE_INDEX_META);
+    db.exec(CREATE_NODES_FTS);
+    for (const idx of CREATE_INDEXES)
+        db.exec(idx);
+    db.exec(FTS_SYNC_TRIGGERS);
+}
+/** Write to a .tmp file then rename for atomic replacement. */
+export function atomicRebuild(dbPath, buildFn) {
+    const tmpPath = dbPath + '.tmp';
+    const db = openDb(tmpPath);
+    try {
+        buildFn(db);
+        db.close();
+        renameSync(tmpPath, dbPath);
+    }
+    catch (err) {
+        db.close();
+        if (existsSync(tmpPath)) {
+            try {
+                unlinkSync(tmpPath);
+            }
+            catch { /* ignore */ }
+        }
+        throw err;
+    }
+}
+//# sourceMappingURL=db.js.map

package/dist/src/storage/db.js.map

@@ -0,0 +1 @@
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package/dist/src/storage/edge-store.d.ts

@@ -0,0 +1,9 @@
+import type Database from 'better-sqlite3';
+import type { MonographEdge } from '../types.js';
+export declare function insertEdge(db: Database.Database, edge: MonographEdge): void;
+export declare function insertEdges(db: Database.Database, edges: MonographEdge[]): void;
+export declare function getEdgesForSource(db: Database.Database, sourceId: string): MonographEdge[];
+export declare function getEdgesForTarget(db: Database.Database, targetId: string): MonographEdge[];
+export declare function deleteEdgesForFile(db: Database.Database, filePath: string): void;
+export declare function countEdges(db: Database.Database): number;
+//# sourceMappingURL=edge-store.d.ts.map

package/dist/src/storage/edge-store.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/storage/edge-store.js

@@ -0,0 +1,46 @@
+export function insertEdge(db, edge) {
+    db.prepare(`
+    INSERT OR REPLACE INTO edges (id, source_id, target_id, relation, confidence, confidence_score)
+    VALUES (?, ?, ?, ?, ?, ?)
+  `).run(edge.id, edge.sourceId, edge.targetId, edge.relation, edge.confidence, edge.confidenceScore);
+}
+export function insertEdges(db, edges) {
+    const insertMany = db.transaction((rows) => {
+        for (const e of rows) {
+            insertEdge(db, e);
+        }
+    });
+    insertMany(edges);
+}
+export function getEdgesForSource(db, sourceId) {
+    const rows = db
+        .prepare('SELECT * FROM edges WHERE source_id = ?')
+        .all(sourceId);
+    return rows.map(rowToEdge);
+}
+export function getEdgesForTarget(db, targetId) {
+    const rows = db
+        .prepare('SELECT * FROM edges WHERE target_id = ?')
+        .all(targetId);
+    return rows.map(rowToEdge);
+}
+export function deleteEdgesForFile(db, filePath) {
+    db.prepare(`
+    DELETE FROM edges WHERE source_id IN (SELECT id FROM nodes WHERE file_path = ?)
+  `).run(filePath);
+}
+export function countEdges(db) {
+    const row = db.prepare('SELECT COUNT(*) as n FROM edges').get();
+    return row.n;
+}
+function rowToEdge(row) {
+    return {
+        id: row.id,
+        sourceId: row.source_id,
+        targetId: row.target_id,
+        relation: row.relation,
+        confidence: row.confidence,
+        confidenceScore: row.confidence_score,
+    };
+}
+//# sourceMappingURL=edge-store.js.map

package/dist/src/storage/edge-store.js.map

@@ -0,0 +1 @@
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package/dist/src/storage/fts-store.d.ts

@@ -0,0 +1,11 @@
+import type Database from 'better-sqlite3';
+export interface FtsResult {
+    id: string;
+    name: string;
+    normLabel: string;
+    filePath: string | null;
+    label: string;
+    rank: number;
+}
+export declare function ftsSearch(db: Database.Database, query: string, limit: number, label?: string): FtsResult[];
+//# sourceMappingURL=fts-store.d.ts.map

package/dist/src/storage/fts-store.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"fts-store.d.ts","sourceRoot":"","sources":["../../../src/storage/fts-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;CACd;AAED,wBAAgB,SAAS,CACvB,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,KAAK,CAAC,EAAE,MAAM,GACb,SAAS,EAAE,CAmCb"}

package/dist/src/storage/fts-store.js

@@ -0,0 +1,32 @@
+export function ftsSearch(db, query, limit, label) {
+    // Clean and sanitize the query for FTS5
+    const safeQuery = query.replace(/['"*]/g, ' ').trim();
+    if (!safeQuery)
+        return [];
+    // Add wildcard for prefix matching
+    const ftsPrefixQuery = safeQuery.split(/\s+/).map((term) => term + '*').join(' ');
+    let sql = `
+    SELECT n.id, n.name, n.norm_label, n.file_path, n.label,
+           nodes_fts.rank
+    FROM nodes_fts
+    JOIN nodes n ON n.rowid = nodes_fts.rowid
+    WHERE nodes_fts MATCH ?
+  `;
+    const params = [ftsPrefixQuery];
+    if (label) {
+        sql += ' AND n.label = ?';
+        params.push(label);
+    }
+    sql += ' ORDER BY nodes_fts.rank LIMIT ?';
+    params.push(limit);
+    const rows = db.prepare(sql).all(...params);
+    return rows.map((r) => ({
+        id: r.id,
+        name: r.name,
+        normLabel: r.norm_label,
+        filePath: r.file_path ?? null,
+        label: r.label,
+        rank: r.rank,
+    }));
+}
+//# sourceMappingURL=fts-store.js.map

package/dist/src/storage/fts-store.js.map

@@ -0,0 +1 @@
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package/dist/src/storage/node-store.d.ts

@@ -0,0 +1,9 @@
+import type Database from 'better-sqlite3';
+import type { MonographNode } from '../types.js';
+export declare function insertNode(db: Database.Database, node: MonographNode): void;
+export declare function insertNodes(db: Database.Database, nodes: MonographNode[]): void;
+export declare function getNode(db: Database.Database, id: string): MonographNode | undefined;
+export declare function getNodesForFile(db: Database.Database, filePath: string): MonographNode[];
+export declare function deleteNodesForFile(db: Database.Database, filePath: string): void;
+export declare function countNodes(db: Database.Database): number;
+//# sourceMappingURL=node-store.d.ts.map

package/dist/src/storage/node-store.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"node-store.d.ts","sourceRoot":"","sources":["../../../src/storage/node-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,aAAa,GAAG,IAAI,CAmB3E;AAED,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,aAAa,EAAE,GAAG,IAAI,CAO/E;AAED,wBAAgB,OAAO,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,EAAE,EAAE,MAAM,GAAG,aAAa,GAAG,SAAS,CAKpF;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAKxF;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAEhF;AAED,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAGxD"}

package/dist/src/storage/node-store.js

@@ -0,0 +1,52 @@
+import { toNormLabel } from '../types.js';
+export function insertNode(db, node) {
+    db.prepare(`
+    INSERT OR REPLACE INTO nodes
+      (id, label, name, norm_label, file_path, start_line, end_line,
+       community_id, is_exported, language, properties)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+  `).run(node.id, node.label, node.name, node.normLabel ?? toNormLabel(node.name), node.filePath ?? null, node.startLine ?? null, node.endLine ?? null, node.communityId ?? null, node.isExported ? 1 : 0, node.language ?? null, node.properties ? JSON.stringify(node.properties) : null);
+}
+export function insertNodes(db, nodes) {
+    const insertMany = db.transaction((rows) => {
+        for (const n of rows) {
+            insertNode(db, n);
+        }
+    });
+    insertMany(nodes);
+}
+export function getNode(db, id) {
+    const row = db
+        .prepare('SELECT * FROM nodes WHERE id = ?')
+        .get(id);
+    return row ? rowToNode(row) : undefined;
+}
+export function getNodesForFile(db, filePath) {
+    const rows = db
+        .prepare('SELECT * FROM nodes WHERE file_path = ?')
+        .all(filePath);
+    return rows.map(rowToNode);
+}
+export function deleteNodesForFile(db, filePath) {
+    db.prepare('DELETE FROM nodes WHERE file_path = ?').run(filePath);
+}
+export function countNodes(db) {
+    const row = db.prepare('SELECT COUNT(*) as n FROM nodes').get();
+    return row.n;
+}
+function rowToNode(row) {
+    return {
+        id: row.id,
+        label: row.label,
+        name: row.name,
+        normLabel: row.norm_label,
+        filePath: row.file_path,
+        startLine: row.start_line,
+        endLine: row.end_line,
+        communityId: row.community_id,
+        isExported: row.is_exported === 1,
+        language: row.language,
+        properties: row.properties ? JSON.parse(row.properties) : undefined,
+    };
+}
+//# sourceMappingURL=node-store.js.map

package/dist/src/storage/node-store.js.map

@@ -0,0 +1 @@
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package/dist/src/storage/schema.d.ts

@@ -0,0 +1,8 @@
+export declare const CREATE_NODES = "\nCREATE TABLE IF NOT EXISTS nodes (\n  id TEXT PRIMARY KEY,\n  label TEXT NOT NULL,\n  name TEXT NOT NULL,\n  norm_label TEXT NOT NULL DEFAULT '',\n  file_path TEXT,\n  start_line INTEGER,\n  end_line INTEGER,\n  community_id INTEGER,\n  is_exported INTEGER NOT NULL DEFAULT 0,\n  language TEXT,\n  properties TEXT\n)";
+export declare const CREATE_EDGES = "\nCREATE TABLE IF NOT EXISTS edges (\n  id TEXT PRIMARY KEY,\n  source_id TEXT NOT NULL,\n  target_id TEXT NOT NULL,\n  relation TEXT NOT NULL,\n  confidence TEXT NOT NULL DEFAULT 'EXTRACTED',\n  confidence_score REAL NOT NULL DEFAULT 1.0,\n  FOREIGN KEY (source_id) REFERENCES nodes(id),\n  FOREIGN KEY (target_id) REFERENCES nodes(id)\n)";
+export declare const CREATE_COMMUNITIES = "\nCREATE TABLE IF NOT EXISTS communities (\n  id INTEGER PRIMARY KEY,\n  label TEXT,\n  size INTEGER NOT NULL DEFAULT 0,\n  cohesion_score REAL NOT NULL DEFAULT 0.0\n)";
+export declare const CREATE_INDEX_META = "\nCREATE TABLE IF NOT EXISTS index_meta (\n  key TEXT PRIMARY KEY,\n  value TEXT NOT NULL\n)";
+export declare const CREATE_NODES_FTS = "\nCREATE VIRTUAL TABLE IF NOT EXISTS nodes_fts USING fts5(\n  id UNINDEXED,\n  name,\n  norm_label,\n  file_path,\n  label UNINDEXED,\n  content='nodes',\n  content_rowid='rowid'\n)";
+export declare const CREATE_INDEXES: string[];
+export declare const FTS_SYNC_TRIGGERS = "\nCREATE TRIGGER IF NOT EXISTS nodes_fts_insert AFTER INSERT ON nodes BEGIN\n  INSERT INTO nodes_fts(rowid, id, name, norm_label, file_path, label)\n  VALUES (new.rowid, new.id, new.name, new.norm_label, new.file_path, new.label);\nEND;\nCREATE TRIGGER IF NOT EXISTS nodes_fts_delete AFTER DELETE ON nodes BEGIN\n  INSERT INTO nodes_fts(nodes_fts, rowid, id, name, norm_label, file_path, label)\n  VALUES ('delete', old.rowid, old.id, old.name, old.norm_label, old.file_path, old.label);\nEND;\nCREATE TRIGGER IF NOT EXISTS nodes_fts_update AFTER UPDATE ON nodes BEGIN\n  INSERT INTO nodes_fts(nodes_fts, rowid, id, name, norm_label, file_path, label)\n  VALUES ('delete', old.rowid, old.id, old.name, old.norm_label, old.file_path, old.label);\n  INSERT INTO nodes_fts(rowid, id, name, norm_label, file_path, label)\n  VALUES (new.rowid, new.id, new.name, new.norm_label, new.file_path, new.label);\nEND";
+//# sourceMappingURL=schema.d.ts.map

package/dist/src/storage/schema.d.ts.map

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package/dist/src/storage/schema.js

@@ -0,0 +1,72 @@
+export const CREATE_NODES = `
+CREATE TABLE IF NOT EXISTS nodes (
+  id TEXT PRIMARY KEY,
+  label TEXT NOT NULL,
+  name TEXT NOT NULL,
+  norm_label TEXT NOT NULL DEFAULT '',
+  file_path TEXT,
+  start_line INTEGER,
+  end_line INTEGER,
+  community_id INTEGER,
+  is_exported INTEGER NOT NULL DEFAULT 0,
+  language TEXT,
+  properties TEXT
+)`;
+export const CREATE_EDGES = `
+CREATE TABLE IF NOT EXISTS edges (
+  id TEXT PRIMARY KEY,
+  source_id TEXT NOT NULL,
+  target_id TEXT NOT NULL,
+  relation TEXT NOT NULL,
+  confidence TEXT NOT NULL DEFAULT 'EXTRACTED',
+  confidence_score REAL NOT NULL DEFAULT 1.0,
+  FOREIGN KEY (source_id) REFERENCES nodes(id),
+  FOREIGN KEY (target_id) REFERENCES nodes(id)
+)`;
+export const CREATE_COMMUNITIES = `
+CREATE TABLE IF NOT EXISTS communities (
+  id INTEGER PRIMARY KEY,
+  label TEXT,
+  size INTEGER NOT NULL DEFAULT 0,
+  cohesion_score REAL NOT NULL DEFAULT 0.0
+)`;
+export const CREATE_INDEX_META = `
+CREATE TABLE IF NOT EXISTS index_meta (
+  key TEXT PRIMARY KEY,
+  value TEXT NOT NULL
+)`;
+export const CREATE_NODES_FTS = `
+CREATE VIRTUAL TABLE IF NOT EXISTS nodes_fts USING fts5(
+  id UNINDEXED,
+  name,
+  norm_label,
+  file_path,
+  label UNINDEXED,
+  content='nodes',
+  content_rowid='rowid'
+)`;
+export const CREATE_INDEXES = [
+    `CREATE INDEX IF NOT EXISTS idx_nodes_file ON nodes(file_path)`,
+    `CREATE INDEX IF NOT EXISTS idx_nodes_label ON nodes(label)`,
+    `CREATE INDEX IF NOT EXISTS idx_nodes_norm ON nodes(norm_label)`,
+    `CREATE INDEX IF NOT EXISTS idx_edges_source ON edges(source_id)`,
+    `CREATE INDEX IF NOT EXISTS idx_edges_target ON edges(target_id)`,
+    `CREATE INDEX IF NOT EXISTS idx_edges_relation ON edges(relation)`,
+    `CREATE INDEX IF NOT EXISTS idx_edges_confidence ON edges(confidence)`,
+];
+export const FTS_SYNC_TRIGGERS = `
+CREATE TRIGGER IF NOT EXISTS nodes_fts_insert AFTER INSERT ON nodes BEGIN
+  INSERT INTO nodes_fts(rowid, id, name, norm_label, file_path, label)
+  VALUES (new.rowid, new.id, new.name, new.norm_label, new.file_path, new.label);
+END;
+CREATE TRIGGER IF NOT EXISTS nodes_fts_delete AFTER DELETE ON nodes BEGIN
+  INSERT INTO nodes_fts(nodes_fts, rowid, id, name, norm_label, file_path, label)
+  VALUES ('delete', old.rowid, old.id, old.name, old.norm_label, old.file_path, old.label);
+END;
+CREATE TRIGGER IF NOT EXISTS nodes_fts_update AFTER UPDATE ON nodes BEGIN
+  INSERT INTO nodes_fts(nodes_fts, rowid, id, name, norm_label, file_path, label)
+  VALUES ('delete', old.rowid, old.id, old.name, old.norm_label, old.file_path, old.label);
+  INSERT INTO nodes_fts(rowid, id, name, norm_label, file_path, label)
+  VALUES (new.rowid, new.id, new.name, new.norm_label, new.file_path, new.label);
+END`;
+//# sourceMappingURL=schema.js.map

package/dist/src/storage/schema.js.map

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package/dist/src/types.d.ts

@@ -0,0 +1,76 @@
+export type NodeLabel = 'File' | 'Folder' | 'Function' | 'Class' | 'Method' | 'Interface' | 'Variable' | 'Struct' | 'Enum' | 'Macro' | 'Typedef' | 'Union' | 'Namespace' | 'Trait' | 'Impl' | 'TypeAlias' | 'Const' | 'Static' | 'Property' | 'Record' | 'Delegate' | 'Annotation' | 'Constructor' | 'Template' | 'Module' | 'Process' | 'Route' | 'Community' | 'Concept';
+export declare const SYMBOL_NODE_LABELS: Set<NodeLabel>;
+export type EdgeRelation = 'CONTAINS' | 'DEFINES' | 'CALLS' | 'IMPORTS' | 'EXTENDS' | 'IMPLEMENTS' | 'HAS_METHOD' | 'HAS_PROPERTY' | 'ACCESSES' | 'METHOD_OVERRIDES' | 'METHOD_IMPLEMENTS' | 'MEMBER_OF' | 'STEP_IN_PROCESS' | 'HANDLES_ROUTE' | 'FETCHES' | 'HANDLES_TOOL' | 'ENTRY_POINT_OF' | 'WRAPS' | 'QUERIES';
+export type EdgeConfidence = 'EXTRACTED' | 'INFERRED' | 'AMBIGUOUS';
+export declare const CONFIDENCE_SCORE: Record<EdgeConfidence, number>;
+export interface MonographNode {
+    id: string;
+    label: NodeLabel;
+    name: string;
+    normLabel: string;
+    filePath?: string;
+    startLine?: number;
+    endLine?: number;
+    communityId?: number;
+    isExported: boolean;
+    language?: string;
+    properties?: Record<string, unknown>;
+}
+export interface MonographEdge {
+    id: string;
+    sourceId: string;
+    targetId: string;
+    relation: EdgeRelation;
+    confidence: EdgeConfidence;
+    confidenceScore: number;
+}
+export interface MonographCommunity {
+    id: number;
+    label?: string;
+    size: number;
+    cohesionScore: number;
+}
+export interface GodNode extends MonographNode {
+    degree: number;
+    inDegree: number;
+    outDegree: number;
+}
+export interface SurprisingConnection {
+    edge: MonographEdge;
+    score: number;
+    reasons: string[];
+}
+export type SuggestedQuestion = {
+    type: 'ambiguous_edge';
+    edge: MonographEdge;
+    reason: string;
+} | {
+    type: 'bridge_node';
+    node: MonographNode;
+    commA: number;
+    commB: number;
+} | {
+    type: 'verify_inferred';
+    edge: MonographEdge;
+    inferredFrom: string;
+} | {
+    type: 'isolated_nodes';
+    nodes: MonographNode[];
+    reason: string;
+} | {
+    type: 'low_cohesion';
+    community: MonographCommunity;
+};
+export declare function makeId(...parts: string[]): string;
+export declare function toNormLabel(name: string): string;
+export interface PipelineProgress {
+    phase: string;
+    filesProcessed?: number;
+    totalFiles?: number;
+    message?: string;
+}
+export declare class MonographError extends Error {
+    readonly cause?: unknown | undefined;
+    constructor(message: string, cause?: unknown | undefined);
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/src/types.d.ts.map

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