@molgenis/vip-report-template 4.0.0 → 5.0.0

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@molgenis/vip-report-template",
-  "version": "4.0.0",
+  "version": "5.0.0",
   "description": "Report Template for Variant Call Format (VCF) Report Generator",
   "scripts": {
     "build": "vite build",

package/src/components/GenomeBrowser.tsx

@@ -48,7 +48,7 @@ const createBrowserConfig = async (contig: string, position: number, samples: Sa
     tracks.push({
       order: order++,
       type: "annotation",
-      format: "refGene",
+      format: "gff3",
       name: "Genes",
       url: "data:application/gzip;base64," + fromByteArray(genesGz),
     });

package/src/mocks/GRCh37/static.ts

@@ -38,7 +38,7 @@ import fastaUrl22_50721296_50721796 from "./fasta/22-50721296-50721796.fasta.gz.
 import fastaUrlX_48932771_48933271 from "./fasta/X-48932771-48933271.fasta.gz.blob";
 import fastaUrlY_2655391_2655891 from "./fasta/Y-2655391-2655891.fasta.gz.blob";
 import fastaUrlMT_15076_15576 from "./fasta/MT-15076-15576.fasta.gz.blob";
-import genesUrl from "./genes.txt.gz.blob";
+import genesUrl from "./genes.gff.gz.blob";
 import vcfUrlFamily from "./vcf/family.vcf.blob";
 import vcfUrlNoVep from "./vcf/no_vep.vcf.blob";
 import vcfUrlSamples0 from "./vcf/samples_0.vcf.blob";

package/src/mocks/GRCh38/static.ts

@@ -26,7 +26,7 @@ import fastaUrl_chr22_50282867_50283367 from "./fasta/chr22-50282867-50283367.fa
 import fastaUrl_chrM_15075_15575 from "./fasta/chrM-15075-15575.fasta.gz.blob";
 import fastaUrl_chrX_49075112_49075612 from "./fasta/chrX-49075112-49075612.fasta.gz.blob";
 import fastaUrl_chrY_2787350_2787850 from "./fasta/chrY-2787350-2787850.fasta.gz.blob";
-import genesUrl from "./genes.txt.gz.blob";
+import genesUrl from "./genes.gff.gz.blob";
 import vcfUrlFamily from "./vcf/family.vcf.blob";
 import vcfUrlNoVep from "./vcf/no_vep.vcf.blob";
 import vcfUrlSamples0 from "./vcf/samples_0.vcf.blob";