@mnemonik/cli 7.111.10 → 7.112.3

package/dist/runtime/updateCheck.js

@@ -501,6 +501,13 @@ var require_ignore = __commonJS({
   }
 });
 
+// packages/shared/dist/hookTimeouts.js
+var init_hookTimeouts = __esm({
+  "packages/shared/dist/hookTimeouts.js"() {
+    "use strict";
+  }
+});
+
 // packages/shared/dist/runtimeSigners.js
 import { basename, dirname as dirname2, join as join2, resolve, sep, win32 } from "node:path";
 import { execFile, execFileSync } from "node:child_process";
@@ -618,11 +625,37 @@ var init_runtimeReader = __esm({
 });
 
 // packages/shared/dist/projectSetupHandoff.js
+var PROJECT_ENSURE_TIMEOUT_MS, SUPERVISOR, RUN_STALE_MS;
 var init_projectSetupHandoff = __esm({
   "packages/shared/dist/projectSetupHandoff.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_runtimeReader();
+    PROJECT_ENSURE_TIMEOUT_MS = 3e4;
+    SUPERVISOR = `
+const { execFile } = require('node:child_process');
+const { writeFileSync, renameSync } = require('node:fs');
+const [out, bin, ...args] = process.argv.slice(1);
+let input = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => (input += chunk));
+process.stdin.on('end', () => {
+  const child = execFile(
+    process.execPath,
+    [bin, ...args],
+    { shell: false, timeout: ${PROJECT_ENSURE_TIMEOUT_MS}, killSignal: 'SIGKILL', maxBuffer: 64 * 1024, env: process.env },
+    (error, stdout) => {
+      const result = { code: error ? (typeof error.code === 'number' ? error.code : null) : 0, killed: !!(error && error.killed), stdout: String(stdout) };
+      writeFileSync(out + '.tmp', JSON.stringify(result), { mode: 0o600 });
+      renameSync(out + '.tmp', out);
+    }
+  );
+  child.stdin.on('error', () => {});
+  child.stdin.end(input);
+});
+`;
+    RUN_STALE_MS = PROJECT_ENSURE_TIMEOUT_MS + 1e4;
   }
 });
 
@@ -631,6 +664,7 @@ var init_hookRuntime = __esm({
   "packages/shared/dist/hookRuntime.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_repositoryRoot();
     init_runtimeReader();
     init_runtimeSigners();
@@ -2230,7 +2264,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -2239,7 +2273,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -6401,6 +6436,9 @@ var DEFAULT_OPTIONS = {
 };
 var BUILT_IN_IGNORE_DIR_SET = new Set(BUILT_IN_IGNORE_DIRS);
 
+// packages/shared/dist/index.js
+init_hookTimeouts();
+
 // packages/shared/dist/jitDeliveryAck.js
 init_runtimeSigners();
 

package/dist/sbom.json

@@ -17,13 +17,13 @@
       }
     ],
     "component": {
-      "bom-ref": "@mnemonik/cli@0.1.73",
+      "bom-ref": "@mnemonik/cli@0.1.77",
       "type": "library",
       "name": "@mnemonik/cli",
-      "version": "0.1.73",
+      "version": "0.1.77",
       "scope": "required",
       "description": "Mnemonik installer and local project helper",
-      "purl": "pkg:npm/%40mnemonik/cli@0.1.73",
+      "purl": "pkg:npm/%40mnemonik/cli@0.1.77",
       "properties": [],
       "externalReferences": [
         {
@@ -35,12 +35,12 @@
   },
   "components": [
     {
-      "bom-ref": "@mnemonik/credentials@0.1.73",
+      "bom-ref": "@mnemonik/credentials@0.1.77",
       "type": "library",
       "name": "@mnemonik/credentials",
-      "version": "0.1.73",
+      "version": "0.1.77",
       "scope": "required",
-      "purl": "pkg:npm/%40mnemonik/credentials@0.1.73",
+      "purl": "pkg:npm/%40mnemonik/credentials@0.1.77",
       "properties": [],
       "externalReferences": [
         {
@@ -50,12 +50,12 @@
       ]
     },
     {
-      "bom-ref": "@mnemonik/local-setup@0.1.73",
+      "bom-ref": "@mnemonik/local-setup@0.1.77",
       "type": "library",
       "name": "@mnemonik/local-setup",
-      "version": "0.1.73",
+      "version": "0.1.77",
       "scope": "required",
-      "purl": "pkg:npm/%40mnemonik/local-setup@0.1.73",
+      "purl": "pkg:npm/%40mnemonik/local-setup@0.1.77",
       "properties": [],
       "externalReferences": [
         {
@@ -65,14 +65,14 @@
       ]
     },
     {
-      "bom-ref": "@mnemonik/shared@7.111.10",
+      "bom-ref": "@mnemonik/shared@7.112.3",
       "type": "library",
       "name": "@mnemonik/shared",
-      "version": "7.111.10",
+      "version": "7.112.3",
       "scope": "required",
       "author": "Anthony",
       "description": "Shared constants and utilities for Mnemonik packages",
-      "purl": "pkg:npm/%40mnemonik/shared@7.111.10",
+      "purl": "pkg:npm/%40mnemonik/shared@7.112.3",
       "properties": [],
       "externalReferences": [
         {
@@ -271,29 +271,29 @@
   ],
   "dependencies": [
     {
-      "ref": "@mnemonik/cli@0.1.73",
+      "ref": "@mnemonik/cli@0.1.77",
       "dependsOn": [
-        "@mnemonik/credentials@0.1.73",
-        "@mnemonik/local-setup@0.1.73",
-        "@mnemonik/shared@7.111.10",
+        "@mnemonik/credentials@0.1.77",
+        "@mnemonik/local-setup@0.1.77",
+        "@mnemonik/shared@7.112.3",
         "smol-toml@1.8.0"
       ]
     },
     {
-      "ref": "@mnemonik/credentials@0.1.73",
+      "ref": "@mnemonik/credentials@0.1.77",
       "dependsOn": [
-        "@mnemonik/local-setup@0.1.73"
+        "@mnemonik/local-setup@0.1.77"
       ]
     },
     {
-      "ref": "@mnemonik/local-setup@0.1.73",
+      "ref": "@mnemonik/local-setup@0.1.77",
       "dependsOn": [
-        "@mnemonik/shared@7.111.10",
+        "@mnemonik/shared@7.112.3",
         "proper-lockfile@4.1.2"
       ]
     },
     {
-      "ref": "@mnemonik/shared@7.111.10",
+      "ref": "@mnemonik/shared@7.112.3",
       "dependsOn": [
         "ignore@7.0.6",
         "web-tree-sitter@0.26.13"

package/dist/scanner/control.js

@@ -501,6 +501,13 @@ var require_ignore = __commonJS({
   }
 });
 
+// packages/shared/dist/hookTimeouts.js
+var init_hookTimeouts = __esm({
+  "packages/shared/dist/hookTimeouts.js"() {
+    "use strict";
+  }
+});
+
 // packages/shared/dist/runtimeSigners.js
 import { basename, dirname as dirname2, join as join2, resolve, sep, win32 } from "node:path";
 import { execFile, execFileSync } from "node:child_process";
@@ -618,11 +625,37 @@ var init_runtimeReader = __esm({
 });
 
 // packages/shared/dist/projectSetupHandoff.js
+var PROJECT_ENSURE_TIMEOUT_MS, SUPERVISOR, RUN_STALE_MS;
 var init_projectSetupHandoff = __esm({
   "packages/shared/dist/projectSetupHandoff.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_runtimeReader();
+    PROJECT_ENSURE_TIMEOUT_MS = 3e4;
+    SUPERVISOR = `
+const { execFile } = require('node:child_process');
+const { writeFileSync, renameSync } = require('node:fs');
+const [out, bin, ...args] = process.argv.slice(1);
+let input = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => (input += chunk));
+process.stdin.on('end', () => {
+  const child = execFile(
+    process.execPath,
+    [bin, ...args],
+    { shell: false, timeout: ${PROJECT_ENSURE_TIMEOUT_MS}, killSignal: 'SIGKILL', maxBuffer: 64 * 1024, env: process.env },
+    (error, stdout) => {
+      const result = { code: error ? (typeof error.code === 'number' ? error.code : null) : 0, killed: !!(error && error.killed), stdout: String(stdout) };
+      writeFileSync(out + '.tmp', JSON.stringify(result), { mode: 0o600 });
+      renameSync(out + '.tmp', out);
+    }
+  );
+  child.stdin.on('error', () => {});
+  child.stdin.end(input);
+});
+`;
+    RUN_STALE_MS = PROJECT_ENSURE_TIMEOUT_MS + 1e4;
   }
 });
 
@@ -631,6 +664,7 @@ var init_hookRuntime = __esm({
   "packages/shared/dist/hookRuntime.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_repositoryRoot();
     init_runtimeReader();
     init_runtimeSigners();
@@ -2226,7 +2260,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -2235,7 +2269,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -6397,6 +6432,9 @@ var DEFAULT_OPTIONS = {
 };
 var BUILT_IN_IGNORE_DIR_SET = new Set(BUILT_IN_IGNORE_DIRS);
 
+// packages/shared/dist/index.js
+init_hookTimeouts();
+
 // packages/shared/dist/jitDeliveryAck.js
 init_runtimeSigners();
 

package/dist/scanner/data.js

@@ -498,7 +498,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -507,7 +507,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {

package/dist/scanner/discover.js

@@ -503,7 +503,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -512,7 +512,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -4898,7 +4899,7 @@ async function readIdentityFile(dir, options = {}) {
     if (options.selectedRoot) {
       try {
         const value = JSON.parse(text);
-        if (value && typeof value === "object" && !Array.isArray(value) && !("projectId" in value))
+        if (value && typeof value === "object" && !Array.isArray(value) && !("projectId" in value) && (!("schemaVersion" in value) || value.schemaVersion === 1))
           return { kind: "absent" };
       } catch {
       }

package/dist/scanner/enable.js

@@ -501,6 +501,13 @@ var require_ignore = __commonJS({
   }
 });
 
+// packages/shared/dist/hookTimeouts.js
+var init_hookTimeouts = __esm({
+  "packages/shared/dist/hookTimeouts.js"() {
+    "use strict";
+  }
+});
+
 // packages/shared/dist/runtimeSigners.js
 import { basename, dirname as dirname2, join as join2, resolve, sep, win32 } from "node:path";
 import { execFile, execFileSync } from "node:child_process";
@@ -618,11 +625,37 @@ var init_runtimeReader = __esm({
 });
 
 // packages/shared/dist/projectSetupHandoff.js
+var PROJECT_ENSURE_TIMEOUT_MS, SUPERVISOR, RUN_STALE_MS;
 var init_projectSetupHandoff = __esm({
   "packages/shared/dist/projectSetupHandoff.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_runtimeReader();
+    PROJECT_ENSURE_TIMEOUT_MS = 3e4;
+    SUPERVISOR = `
+const { execFile } = require('node:child_process');
+const { writeFileSync, renameSync } = require('node:fs');
+const [out, bin, ...args] = process.argv.slice(1);
+let input = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => (input += chunk));
+process.stdin.on('end', () => {
+  const child = execFile(
+    process.execPath,
+    [bin, ...args],
+    { shell: false, timeout: ${PROJECT_ENSURE_TIMEOUT_MS}, killSignal: 'SIGKILL', maxBuffer: 64 * 1024, env: process.env },
+    (error, stdout) => {
+      const result = { code: error ? (typeof error.code === 'number' ? error.code : null) : 0, killed: !!(error && error.killed), stdout: String(stdout) };
+      writeFileSync(out + '.tmp', JSON.stringify(result), { mode: 0o600 });
+      renameSync(out + '.tmp', out);
+    }
+  );
+  child.stdin.on('error', () => {});
+  child.stdin.end(input);
+});
+`;
+    RUN_STALE_MS = PROJECT_ENSURE_TIMEOUT_MS + 1e4;
   }
 });
 
@@ -631,6 +664,7 @@ var init_hookRuntime = __esm({
   "packages/shared/dist/hookRuntime.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_repositoryRoot();
     init_runtimeReader();
     init_runtimeSigners();
@@ -2232,7 +2266,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -2241,7 +2275,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -6403,6 +6438,9 @@ var DEFAULT_OPTIONS = {
 };
 var BUILT_IN_IGNORE_DIR_SET = new Set(BUILT_IN_IGNORE_DIRS);
 
+// packages/shared/dist/index.js
+init_hookTimeouts();
+
 // packages/shared/dist/jitDeliveryAck.js
 init_runtimeSigners();
 

package/dist/scanner/picker.js

@@ -503,7 +503,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -512,7 +512,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {

package/dist/scanner/service.js

@@ -501,6 +501,13 @@ var require_ignore = __commonJS({
   }
 });
 
+// packages/shared/dist/hookTimeouts.js
+var init_hookTimeouts = __esm({
+  "packages/shared/dist/hookTimeouts.js"() {
+    "use strict";
+  }
+});
+
 // packages/shared/dist/runtimeSigners.js
 import { basename, dirname as dirname2, join as join2, resolve, sep, win32 } from "node:path";
 import { execFile, execFileSync } from "node:child_process";
@@ -618,11 +625,37 @@ var init_runtimeReader = __esm({
 });
 
 // packages/shared/dist/projectSetupHandoff.js
+var PROJECT_ENSURE_TIMEOUT_MS, SUPERVISOR, RUN_STALE_MS;
 var init_projectSetupHandoff = __esm({
   "packages/shared/dist/projectSetupHandoff.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_runtimeReader();
+    PROJECT_ENSURE_TIMEOUT_MS = 3e4;
+    SUPERVISOR = `
+const { execFile } = require('node:child_process');
+const { writeFileSync, renameSync } = require('node:fs');
+const [out, bin, ...args] = process.argv.slice(1);
+let input = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => (input += chunk));
+process.stdin.on('end', () => {
+  const child = execFile(
+    process.execPath,
+    [bin, ...args],
+    { shell: false, timeout: ${PROJECT_ENSURE_TIMEOUT_MS}, killSignal: 'SIGKILL', maxBuffer: 64 * 1024, env: process.env },
+    (error, stdout) => {
+      const result = { code: error ? (typeof error.code === 'number' ? error.code : null) : 0, killed: !!(error && error.killed), stdout: String(stdout) };
+      writeFileSync(out + '.tmp', JSON.stringify(result), { mode: 0o600 });
+      renameSync(out + '.tmp', out);
+    }
+  );
+  child.stdin.on('error', () => {});
+  child.stdin.end(input);
+});
+`;
+    RUN_STALE_MS = PROJECT_ENSURE_TIMEOUT_MS + 1e4;
   }
 });
 
@@ -631,6 +664,7 @@ var init_hookRuntime = __esm({
   "packages/shared/dist/hookRuntime.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_repositoryRoot();
     init_runtimeReader();
     init_runtimeSigners();
@@ -2226,7 +2260,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -2235,7 +2269,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -6397,6 +6432,9 @@ var DEFAULT_OPTIONS = {
 };
 var BUILT_IN_IGNORE_DIR_SET = new Set(BUILT_IN_IGNORE_DIRS);
 
+// packages/shared/dist/index.js
+init_hookTimeouts();
+
 // packages/shared/dist/jitDeliveryAck.js
 init_runtimeSigners();
 

package/dist/scanner/update.js

@@ -501,6 +501,13 @@ var require_ignore = __commonJS({
   }
 });
 
+// packages/shared/dist/hookTimeouts.js
+var init_hookTimeouts = __esm({
+  "packages/shared/dist/hookTimeouts.js"() {
+    "use strict";
+  }
+});
+
 // packages/shared/dist/runtimeSigners.js
 import { basename, dirname as dirname2, join as join2, resolve, sep, win32 } from "node:path";
 import { execFile, execFileSync } from "node:child_process";
@@ -618,11 +625,37 @@ var init_runtimeReader = __esm({
 });
 
 // packages/shared/dist/projectSetupHandoff.js
+var PROJECT_ENSURE_TIMEOUT_MS, SUPERVISOR, RUN_STALE_MS;
 var init_projectSetupHandoff = __esm({
   "packages/shared/dist/projectSetupHandoff.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_runtimeReader();
+    PROJECT_ENSURE_TIMEOUT_MS = 3e4;
+    SUPERVISOR = `
+const { execFile } = require('node:child_process');
+const { writeFileSync, renameSync } = require('node:fs');
+const [out, bin, ...args] = process.argv.slice(1);
+let input = '';
+process.stdin.setEncoding('utf8');
+process.stdin.on('data', (chunk) => (input += chunk));
+process.stdin.on('end', () => {
+  const child = execFile(
+    process.execPath,
+    [bin, ...args],
+    { shell: false, timeout: ${PROJECT_ENSURE_TIMEOUT_MS}, killSignal: 'SIGKILL', maxBuffer: 64 * 1024, env: process.env },
+    (error, stdout) => {
+      const result = { code: error ? (typeof error.code === 'number' ? error.code : null) : 0, killed: !!(error && error.killed), stdout: String(stdout) };
+      writeFileSync(out + '.tmp', JSON.stringify(result), { mode: 0o600 });
+      renameSync(out + '.tmp', out);
+    }
+  );
+  child.stdin.on('error', () => {});
+  child.stdin.end(input);
+});
+`;
+    RUN_STALE_MS = PROJECT_ENSURE_TIMEOUT_MS + 1e4;
   }
 });
 
@@ -631,6 +664,7 @@ var init_hookRuntime = __esm({
   "packages/shared/dist/hookRuntime.js"() {
     "use strict";
     init_runtimeSigners();
+    init_hookTimeouts();
     init_repositoryRoot();
     init_runtimeReader();
     init_runtimeSigners();
@@ -2226,7 +2260,7 @@ Project work items live in tasks. A pending list requires action:"list" and stat
 
 Which tool for what:
 - memory_get: hydrates exact originals by id.
-- memory_add: saves a discrete decision or root cause.
+- memory_add: saves a decision, a user's preference, or a root cause.
 - memory_state: corrects wrong, outdated, or conflicting memory.
 - memory_info: explains confidence or origin when memory looks suspect.
 - memory_links: connects related decisions so they surface together.
@@ -2235,7 +2269,8 @@ Which tool for what:
 - policy: stores durable enforced rules or preferences, not memories.
 - tasks: creates follow-up work and closes completed work.
 - code_search: finds conceptual code when source wording differs.
-- memory_search: finds rationale, intent, decisions, and prior work.`;
+- memory_search: finds rationale, intent, decisions, and prior work.
+- memory_ingest: brings the project's docs and code comments into memory when asked.`;
 function getMcpInstructions() {
   const process2 = globalThis.process;
   if (!process2?.env) {
@@ -6397,6 +6432,9 @@ var DEFAULT_OPTIONS = {
 };
 var BUILT_IN_IGNORE_DIR_SET = new Set(BUILT_IN_IGNORE_DIRS);
 
+// packages/shared/dist/index.js
+init_hookTimeouts();
+
 // packages/shared/dist/jitDeliveryAck.js
 init_runtimeSigners();