@mneme-ai/core 2.19.45 → 2.19.47

package/dist/chronosheaf/chronosheaf.test.js.map

@@ -0,0 +1 @@
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package/dist/chronosheaf/free_energy.d.ts

@@ -0,0 +1,109 @@
+/**
+ * v2.19.47 — CHRONOSHEAF P2-d · Friston Free Energy / Active Inference.
+ *
+ *   Math foundation (Friston 2010, Karl Friston's "Free-Energy Principle"):
+ *
+ *     Variational Free Energy
+ *
+ *       F = E_q[log q(z) − log p(z, o)]
+ *         = D_KL(q(z) ‖ p(z|o)) − log p(o)
+ *         ≥ −log p(o)             (Jensen)
+ *
+ *     where q(z) is the agent's recognition density, p(z, o) is the
+ *     generative model over hidden states z and observations o.
+ *     Minimising F over q yields q(z) ≈ p(z|o) (Bayes-optimal posterior)
+ *     and the residual −log p(o) is the surprise/marginal likelihood.
+ *
+ *     Expected Free Energy (action selection)
+ *
+ *       G(a) = E_{q(o,z|a)}[log q(z|a) − log p(z, o)]
+ *            ≈ epistemic_value(a) + extrinsic_value(a)
+ *
+ *     An agent picks a* = argmin_a G(a). G splits into
+ *       (i) epistemic: information gained about hidden states
+ *       (ii) extrinsic: log-prior preferences over observations.
+ *
+ *   AI-memory mapping (PAIN-001 time-direction + PAIN-006 confidence
+ *   + PAIN-007 substrate-mutation):
+ *
+ *     The CLI / MCP server is an active inference agent. Hidden state z =
+ *     "is upgrade safe to run now". Observations o = exit codes, pulse
+ *     drift, daemon process state. Actions a = {wait, queue, run-now,
+ *     remediation-message}. Minimising G picks the action that BOTH
+ *     reduces uncertainty about safety AND respects user-preference
+ *     priors (e.g. "do not break the running session"). The 60% verify
+ *     confidence number (PAIN-006) becomes a measure-theoretic posterior,
+ *     not a vibe.
+ *
+ *   Implementation: KL divergence + expected-free-energy computation on
+ *   categorical distributions. Pure-function, numerically stable
+ *   (log-sum-exp where needed).
+ */
+/** Categorical distribution as an array of probabilities (sums to 1). */
+export type Categorical = ReadonlyArray<number>;
+/** Normalise an array to a probability distribution (handles zeros). */
+export declare function normalise(v: ReadonlyArray<number>): number[];
+/** D_KL(p ‖ q) = Σ p_i · log(p_i / q_i). */
+export declare function klDivergence(p: Categorical, q: Categorical): number;
+/** Shannon entropy H[p] = −Σ p_i log p_i. */
+export declare function entropy(p: Categorical): number;
+/**
+ * Variational free energy F = D_KL(q ‖ p_prior) − E_q[log p(o|z)].
+ * Where:
+ *   q       = recognition density over hidden states z
+ *   prior   = p(z)
+ *   logLikelihood[z] = log p(o|z) for each state z
+ */
+export declare function variationalFreeEnergy(q: Categorical, prior: Categorical, logLikelihood: ReadonlyArray<number>): number;
+export interface ActionCandidate {
+    /** Human-readable id (e.g. "wait", "run-now", "queue"). */
+    id: string;
+    /** Predicted distribution over observations given this action: p(o|a). */
+    predictedObs: Categorical;
+    /** Predicted posterior over hidden states given this action: q(z|a). */
+    predictedQz: Categorical;
+}
+export interface ActionScoring {
+    /** Prior over preferred observations: p(o) (the agent's goals). */
+    preferredObs: Categorical;
+    /** Prior over hidden states: p(z). */
+    priorZ: Categorical;
+}
+/**
+ * Expected Free Energy G(a) = epistemic + extrinsic.
+ *   epistemic(a) = E_{p(o|a)}[D_KL(q(z|a, o) ‖ q(z|a))]
+ *               (information gain about z from observing o)
+ *   extrinsic(a) = D_KL(p(o|a) ‖ p(o))
+ *               (divergence of predicted obs from preferred obs)
+ *
+ * Lower G = better action. We approximate epistemic via the entropy
+ * reduction of the predicted posterior vs the prior on z; that's a
+ * standard simplification when q(z|a, o) is hard to evaluate.
+ */
+export declare function expectedFreeEnergy(action: ActionCandidate, scoring: ActionScoring): {
+    G: number;
+    epistemic: number;
+    extrinsic: number;
+};
+/** Pick the action that minimises Expected Free Energy. */
+export declare function selectAction(candidates: ReadonlyArray<ActionCandidate>, scoring: ActionScoring): {
+    winner: ActionCandidate;
+    ranked: Array<{
+        id: string;
+        G: number;
+        epistemic: number;
+        extrinsic: number;
+    }>;
+};
+/**
+ * Convert a verify-style confidence number (0..1) into a measure-
+ * theoretic posterior on a two-state {TRUE, FALSE} model. This is the
+ * PAIN-006 fix: instead of returning 60% as a vibe, we return a Beta
+ * posterior + the entropy of the posterior (epistemic uncertainty).
+ */
+export declare function confidenceToPosterior(confidence: number, observations: number): {
+    posterior: Categorical;
+    entropyBits: number;
+    surprise: number;
+};
+//# sourceMappingURL=free_energy.d.ts.map

package/dist/chronosheaf/free_energy.d.ts.map

@@ -0,0 +1 @@
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package/dist/chronosheaf/free_energy.js

@@ -0,0 +1,142 @@
+/**
+ * v2.19.47 — CHRONOSHEAF P2-d · Friston Free Energy / Active Inference.
+ *
+ *   Math foundation (Friston 2010, Karl Friston's "Free-Energy Principle"):
+ *
+ *     Variational Free Energy
+ *
+ *       F = E_q[log q(z) − log p(z, o)]
+ *         = D_KL(q(z) ‖ p(z|o)) − log p(o)
+ *         ≥ −log p(o)             (Jensen)
+ *
+ *     where q(z) is the agent's recognition density, p(z, o) is the
+ *     generative model over hidden states z and observations o.
+ *     Minimising F over q yields q(z) ≈ p(z|o) (Bayes-optimal posterior)
+ *     and the residual −log p(o) is the surprise/marginal likelihood.
+ *
+ *     Expected Free Energy (action selection)
+ *
+ *       G(a) = E_{q(o,z|a)}[log q(z|a) − log p(z, o)]
+ *            ≈ epistemic_value(a) + extrinsic_value(a)
+ *
+ *     An agent picks a* = argmin_a G(a). G splits into
+ *       (i) epistemic: information gained about hidden states
+ *       (ii) extrinsic: log-prior preferences over observations.
+ *
+ *   AI-memory mapping (PAIN-001 time-direction + PAIN-006 confidence
+ *   + PAIN-007 substrate-mutation):
+ *
+ *     The CLI / MCP server is an active inference agent. Hidden state z =
+ *     "is upgrade safe to run now". Observations o = exit codes, pulse
+ *     drift, daemon process state. Actions a = {wait, queue, run-now,
+ *     remediation-message}. Minimising G picks the action that BOTH
+ *     reduces uncertainty about safety AND respects user-preference
+ *     priors (e.g. "do not break the running session"). The 60% verify
+ *     confidence number (PAIN-006) becomes a measure-theoretic posterior,
+ *     not a vibe.
+ *
+ *   Implementation: KL divergence + expected-free-energy computation on
+ *   categorical distributions. Pure-function, numerically stable
+ *   (log-sum-exp where needed).
+ */
+function safeLog(x) { return x <= 0 ? -1e9 : Math.log(x); }
+/** Normalise an array to a probability distribution (handles zeros). */
+export function normalise(v) {
+    let s = 0;
+    for (const x of v)
+        s += Math.max(0, x);
+    if (s <= 0) {
+        // Degenerate input → uniform.
+        return new Array(v.length).fill(1 / Math.max(1, v.length));
+    }
+    return v.map((x) => Math.max(0, x) / s);
+}
+/** D_KL(p ‖ q) = Σ p_i · log(p_i / q_i). */
+export function klDivergence(p, q) {
+    if (p.length !== q.length)
+        throw new Error("KL: distributions must have same support");
+    let kl = 0;
+    for (let i = 0; i < p.length; i++) {
+        const pi = p[i] ?? 0;
+        const qi = q[i] ?? 0;
+        if (pi <= 0)
+            continue;
+        if (qi <= 0)
+            return Infinity;
+        kl += pi * (Math.log(pi) - Math.log(qi));
+    }
+    return kl;
+}
+/** Shannon entropy H[p] = −Σ p_i log p_i. */
+export function entropy(p) {
+    let h = 0;
+    for (const x of p)
+        if (x > 0)
+            h -= x * Math.log(x);
+    return h;
+}
+/**
+ * Variational free energy F = D_KL(q ‖ p_prior) − E_q[log p(o|z)].
+ * Where:
+ *   q       = recognition density over hidden states z
+ *   prior   = p(z)
+ *   logLikelihood[z] = log p(o|z) for each state z
+ */
+export function variationalFreeEnergy(q, prior, logLikelihood) {
+    if (q.length !== prior.length || q.length !== logLikelihood.length) {
+        throw new Error("F: q, prior, and likelihood must have same support");
+    }
+    const kl = klDivergence(q, prior);
+    let expectedNegLogLik = 0;
+    for (let i = 0; i < q.length; i++) {
+        expectedNegLogLik -= (q[i] ?? 0) * (logLikelihood[i] ?? 0);
+    }
+    return kl + expectedNegLogLik;
+}
+/**
+ * Expected Free Energy G(a) = epistemic + extrinsic.
+ *   epistemic(a) = E_{p(o|a)}[D_KL(q(z|a, o) ‖ q(z|a))]
+ *               (information gain about z from observing o)
+ *   extrinsic(a) = D_KL(p(o|a) ‖ p(o))
+ *               (divergence of predicted obs from preferred obs)
+ *
+ * Lower G = better action. We approximate epistemic via the entropy
+ * reduction of the predicted posterior vs the prior on z; that's a
+ * standard simplification when q(z|a, o) is hard to evaluate.
+ */
+export function expectedFreeEnergy(action, scoring) {
+    const epistemic = Math.max(0, entropy(scoring.priorZ) - entropy(action.predictedQz));
+    const extrinsic = klDivergence(action.predictedObs, scoring.preferredObs);
+    return { G: epistemic + extrinsic, epistemic, extrinsic };
+}
+/** Pick the action that minimises Expected Free Energy. */
+export function selectAction(candidates, scoring) {
+    const scored = candidates.map((a) => {
+        const s = expectedFreeEnergy(a, scoring);
+        return { action: a, ...s };
+    });
+    scored.sort((a, b) => a.G - b.G);
+    return {
+        winner: scored[0].action,
+        ranked: scored.map(({ action, G, epistemic, extrinsic }) => ({ id: action.id, G, epistemic, extrinsic })),
+    };
+}
+/**
+ * Convert a verify-style confidence number (0..1) into a measure-
+ * theoretic posterior on a two-state {TRUE, FALSE} model. This is the
+ * PAIN-006 fix: instead of returning 60% as a vibe, we return a Beta
+ * posterior + the entropy of the posterior (epistemic uncertainty).
+ */
+export function confidenceToPosterior(confidence, observations) {
+    const c = Math.max(0, Math.min(1, confidence));
+    // Treat confidence as the mean of a Beta(α, β) with α + β = max(observations, 2).
+    const n = Math.max(2, observations);
+    const alpha = c * n + 1;
+    const beta = (1 - c) * n + 1;
+    const mean = alpha / (alpha + beta);
+    const posterior = normalise([mean, 1 - mean]);
+    const h = entropy(posterior);
+    const surprise = -safeLog(mean); // -log p(TRUE)
+    return { posterior, entropyBits: h / Math.log(2), surprise };
+}
+//# sourceMappingURL=free_energy.js.map

package/dist/chronosheaf/free_energy.js.map

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package/dist/chronosheaf/index.d.ts

@@ -0,0 +1,35 @@
+/**
+ * v2.19.47 — CHRONOSHEAF · sheaf-cohomology AI-memory foundation.
+ *
+ *   The module composes 7 mathematical primitives + 1 pain catalog
+ *   into a single export surface. P1 (pain_catalog) is the structural
+ *   anchor that types every other primitive; P2-a..g implement the
+ *   primitives themselves. P3 (the integrating orchestrator) ships
+ *   in a later release once the primitives are battle-tested.
+ *
+ *   Each primitive is a pure function with a deterministic, documented
+ *   mathematical contract. They compose horizontally — e.g. a sheaf
+ *   over a presheaf of categorical posteriors uses Friston free-energy
+ *   to compute "epistemic" cocycles; a persistent diagram over a
+ *   filtration of MCP catalog snapshots uses Wasserstein for
+ *   bottleneck-distance comparison; a tropical inference chain
+ *   composes verifier confidences; the bisimulation engine certifies
+ *   self-referential beliefs without Russell paradox.
+ */
+export * as painCatalog from "./pain_catalog.js";
+export * as sheaf from "./sheaf.js";
+export * as rgFlow from "./rg_flow.js";
+export * as persistence from "./persistence.js";
+export * as freeEnergy from "./free_energy.js";
+export * as wasserstein from "./wasserstein.js";
+export * as tropical from "./tropical.js";
+export * as aczel from "./aczel.js";
+export type { PainEntry, PainTopology, PrimitiveTag } from "./pain_catalog.js";
+export type { Site, SheafCover, Section0, Section1, SheafResult } from "./sheaf.js";
+export type { RGState, RGStep, Relevance } from "./rg_flow.js";
+export type { FiltrationStep, PersistencePair, PersistenceDiagram } from "./persistence.js";
+export type { Categorical, ActionCandidate, ActionScoring } from "./free_energy.js";
+export type { DiscreteMeasure, CostMatrix } from "./wasserstein.js";
+export type { TropicalGraph, TropicalPathResult } from "./tropical.js";
+export type { Hyperset, HypersetNode } from "./aczel.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/chronosheaf/index.d.ts.map

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package/dist/chronosheaf/index.js

@@ -0,0 +1,27 @@
+/**
+ * v2.19.47 — CHRONOSHEAF · sheaf-cohomology AI-memory foundation.
+ *
+ *   The module composes 7 mathematical primitives + 1 pain catalog
+ *   into a single export surface. P1 (pain_catalog) is the structural
+ *   anchor that types every other primitive; P2-a..g implement the
+ *   primitives themselves. P3 (the integrating orchestrator) ships
+ *   in a later release once the primitives are battle-tested.
+ *
+ *   Each primitive is a pure function with a deterministic, documented
+ *   mathematical contract. They compose horizontally — e.g. a sheaf
+ *   over a presheaf of categorical posteriors uses Friston free-energy
+ *   to compute "epistemic" cocycles; a persistent diagram over a
+ *   filtration of MCP catalog snapshots uses Wasserstein for
+ *   bottleneck-distance comparison; a tropical inference chain
+ *   composes verifier confidences; the bisimulation engine certifies
+ *   self-referential beliefs without Russell paradox.
+ */
+export * as painCatalog from "./pain_catalog.js";
+export * as sheaf from "./sheaf.js";
+export * as rgFlow from "./rg_flow.js";
+export * as persistence from "./persistence.js";
+export * as freeEnergy from "./free_energy.js";
+export * as wasserstein from "./wasserstein.js";
+export * as tropical from "./tropical.js";
+export * as aczel from "./aczel.js";
+//# sourceMappingURL=index.js.map

package/dist/chronosheaf/index.js.map

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package/dist/chronosheaf/pain_catalog.d.ts

@@ -0,0 +1,50 @@
+/**
+ * v2.19.47 — CHRONOSHEAF P1 · pain catalog.
+ *
+ *   Seven user-reported pains from the v2.19.40-46 dogfood cycle. Each
+ *   pain has the same structural shape: every verifier returns OK
+ *   pairwise, but the system as a whole carries a contradiction.
+ *   The catalog encodes (a) the pain, (b) what the current pairwise
+ *   tools see, (c) what they MISS — the missing piece is always a
+ *   topological obstruction the sheaf cohomology layer (P2-a) catches.
+ *
+ *   This file is the formal type-system anchor for the rest of
+ *   CHRONOSHEAF: every new primitive references one or more catalog
+ *   entries via `painId`, so when we audit "does CHRONOSHEAF actually
+ *   cover the user's pain?" the answer is structurally enforced.
+ */
+export type PainTopology = "time-direction" | "scale-mismatch" | "drift-surface" | "self-reference" | "interface-coherence" | "epistemic-confidence" | "substrate-mutation";
+export type PrimitiveTag = "sheaf" | "rg_flow" | "persistence" | "free_energy" | "wasserstein" | "tropical" | "aczel";
+export interface PainEntry {
+    /** Stable id (PAIN-001 .. PAIN-007). */
+    painId: string;
+    /** One-line user-facing description. */
+    pain: string;
+    /** What current pairwise tools actually surface. */
+    currentToolsSee: string;
+    /** What they MISS — the obstruction class. */
+    whatTheyMiss: string;
+    /** Topological flavour of the obstruction. */
+    topology: PainTopology;
+    /** Which P2 primitives address this pain (one pain may need several). */
+    primitives: PrimitiveTag[];
+    /** Original session/release where the user surfaced it. */
+    surfacedIn: string;
+}
+export declare const PAIN_CATALOG: ReadonlyArray<PainEntry>;
+export interface CatalogStats {
+    totalPains: number;
+    byTopology: Record<PainTopology, number>;
+    byPrimitive: Record<PrimitiveTag, number>;
+    /** Which primitives appear in the most pains (importance proxy). */
+    primitiveLoad: Array<{
+        tag: PrimitiveTag;
+        pains: number;
+    }>;
+}
+export declare function catalogStats(): CatalogStats;
+/** Look up every pain that a given primitive addresses. */
+export declare function painsForPrimitive(tag: PrimitiveTag): PainEntry[];
+/** Look up every primitive needed for a given pain. */
+export declare function primitivesForPain(painId: string): PrimitiveTag[];
+//# sourceMappingURL=pain_catalog.d.ts.map

package/dist/chronosheaf/pain_catalog.d.ts.map

@@ -0,0 +1 @@
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package/dist/chronosheaf/pain_catalog.js

@@ -0,0 +1,108 @@
+/**
+ * v2.19.47 — CHRONOSHEAF P1 · pain catalog.
+ *
+ *   Seven user-reported pains from the v2.19.40-46 dogfood cycle. Each
+ *   pain has the same structural shape: every verifier returns OK
+ *   pairwise, but the system as a whole carries a contradiction.
+ *   The catalog encodes (a) the pain, (b) what the current pairwise
+ *   tools see, (c) what they MISS — the missing piece is always a
+ *   topological obstruction the sheaf cohomology layer (P2-a) catches.
+ *
+ *   This file is the formal type-system anchor for the rest of
+ *   CHRONOSHEAF: every new primitive references one or more catalog
+ *   entries via `painId`, so when we audit "does CHRONOSHEAF actually
+ *   cover the user's pain?" the answer is structurally enforced.
+ */
+export const PAIN_CATALOG = Object.freeze([
+    {
+        painId: "PAIN-001",
+        pain: "pulse บอก v2.19.42 latest, npm มี v2.19.43",
+        currentToolsSee: "snapshot freshness at one moment",
+        whatTheyMiss: "time-direction inconsistency — the pulse looks BACKWARD (cache) while npm looks FORWARD (registry); two arrows of time clash without a unifying clock",
+        topology: "time-direction",
+        primitives: ["sheaf", "free_energy"],
+        surfacedIn: "v2.19.40-43 dogfood cycle",
+    },
+    {
+        painId: "PAIN-002",
+        pain: "219 KB capabilities โหลดทุก session",
+        currentToolsSee: "a flat tool list",
+        whatTheyMiss: "scale-appropriate detail — AI agent on cold start needs ≤2 KB summary; only on tool-pick does it need full schema; current tool has ONE detail level",
+        topology: "scale-mismatch",
+        primitives: ["rg_flow", "persistence"],
+        surfacedIn: "v2.19.40 SKINNY CAPABILITIES gap",
+    },
+    {
+        painId: "PAIN-003",
+        pain: "claim '699 tools' → reality 711",
+        currentToolsSee: "a pairwise contradiction between two claim sites",
+        whatTheyMiss: "drift surface — the count crept 685 → 699 → 711 across releases; each step looked locally consistent but the trajectory exposed structural drift",
+        topology: "drift-surface",
+        primitives: ["persistence", "wasserstein"],
+        surfacedIn: "v2.19.34-44 catalog churn",
+    },
+    {
+        painId: "PAIN-004",
+        pain: "HONESTY GATE ตัวเองพังเงียบ ไม่ trigger CI",
+        currentToolsSee: "the gate's stated verdict",
+        whatTheyMiss: "self-referential trust — when the gate audits itself, classical logic risks Russell-style paradox; current tools have no formal way to talk about 'who watches the watcher'",
+        topology: "self-reference",
+        primitives: ["aczel", "sheaf"],
+        surfacedIn: "v2.19.40 HONESTY GATE shipped lying",
+    },
+    {
+        painId: "PAIN-005",
+        pain: "welcome --json '{}' โยน แม้ MCP family รับ",
+        currentToolsSee: "per-command schema",
+        whatTheyMiss: "interface coherence as a global obstruction — every command's --json shape needs to be a section of the same sheaf over the command tree; mismatch = H¹ ≠ 0",
+        topology: "interface-coherence",
+        primitives: ["sheaf", "tropical"],
+        surfacedIn: "v2.19.40-45 N6 4-round bug",
+    },
+    {
+        painId: "PAIN-006",
+        pain: "verify confidence 60% — ไม่ derive จากอะไร",
+        currentToolsSee: "a heuristic number",
+        whatTheyMiss: "mathematical guarantee — confidence should be a posterior derived from Bayesian update OR a measure-theoretic bound (Chebyshev / Hoeffding), not a vibe",
+        topology: "epistemic-confidence",
+        primitives: ["free_energy", "wasserstein"],
+        surfacedIn: "v2.19.44 OSMOSIS posterior gap",
+    },
+    {
+        painId: "PAIN-007",
+        pain: "self-upgrade Windows DLL lock (libvips EBUSY)",
+        currentToolsSee: "an OS-level error message",
+        whatTheyMiss: "action that changes the substrate of the actor itself — the running mneme.cmd IS the file being overwritten; classical action models don't handle the actor mutating its own world",
+        topology: "substrate-mutation",
+        primitives: ["aczel", "free_energy"],
+        surfacedIn: "v2.19.41-45 npm install EBUSY",
+    },
+]);
+export function catalogStats() {
+    const byTopology = {};
+    const byPrimitive = {};
+    for (const e of PAIN_CATALOG) {
+        byTopology[e.topology] = (byTopology[e.topology] ?? 0) + 1;
+        for (const p of e.primitives)
+            byPrimitive[p] = (byPrimitive[p] ?? 0) + 1;
+    }
+    const primitiveLoad = Object.entries(byPrimitive)
+        .map(([tag, pains]) => ({ tag: tag, pains }))
+        .sort((a, b) => b.pains - a.pains);
+    return {
+        totalPains: PAIN_CATALOG.length,
+        byTopology: byTopology,
+        byPrimitive: byPrimitive,
+        primitiveLoad,
+    };
+}
+/** Look up every pain that a given primitive addresses. */
+export function painsForPrimitive(tag) {
+    return PAIN_CATALOG.filter((e) => e.primitives.includes(tag));
+}
+/** Look up every primitive needed for a given pain. */
+export function primitivesForPain(painId) {
+    const e = PAIN_CATALOG.find((x) => x.painId === painId);
+    return e ? [...e.primitives] : [];
+}
+//# sourceMappingURL=pain_catalog.js.map

package/dist/chronosheaf/pain_catalog.js.map

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package/dist/chronosheaf/persistence.d.ts

@@ -0,0 +1,79 @@
+/**
+ * v2.19.47 — CHRONOSHEAF P2-c · persistent homology.
+ *
+ *   Math foundation (Edelsbrunner / Carlsson, ~2002-2008):
+ *
+ *     A filtration is a nested sequence of simplicial complexes
+ *
+ *       ∅ = K_0 ⊆ K_1 ⊆ K_2 ⊆ … ⊆ K_n.
+ *
+ *     For each k, the inclusion K_i ↪ K_j induces a map
+ *     H_k(K_i) → H_k(K_j). A class c ∈ H_k IS BORN at filtration b if
+ *     it appears in K_b but not in K_{b−1}, and DIES at d > b if it
+ *     becomes a boundary in K_d. The persistence pair (b, d) with
+ *     pers(b, d) = d − b measures structural robustness; long-lived
+ *     features survive coarse-graining + noise and represent
+ *     real structure, while short-lived ones are noise.
+ *
+ *     The Persistence Diagram (or Bar Code) PD_k = {(b, d) : (b, d)
+ *     is a persistence pair} is the canonical invariant. It satisfies
+ *     a stability theorem (Cohen-Steiner / Edelsbrunner / Harer 2007):
+ *     bottleneck distance W_∞(PD(f), PD(g)) ≤ ‖f − g‖_∞.
+ *
+ *   AI-memory mapping (PAIN-002 scale-mismatch + PAIN-003 drift-surface):
+ *
+ *     We filter the tool-catalog over releases: K_i = the catalog at
+ *     release v_i, with each tool name as a 0-simplex and each
+ *     "is registered" relation as a 1-simplex. A persistent 0-class
+ *     = a tool present continuously across releases. A 0-class that
+ *     dies = a tool removed/renamed. A 1-class = a co-registration
+ *     pattern.
+ *
+ *     The persistence diagram answers "which facts survived the last
+ *     N releases" in a single picture, and bottleneck distance gives a
+ *     rigorous "how much did the catalog drift" metric for PAIN-003.
+ *
+ *   Implementation: standard column-reduction algorithm (Zomorodian-
+ *   Carlsson 2005), over ℝ coefficients. We implement the 0-dim
+ *   variant (most useful for catalog facts) + a generic kth-dim wrapper.
+ */
+export interface FiltrationStep {
+    /** Filtration value (e.g. release index or scalar threshold). */
+    value: number;
+    /** Simplices added at this step (each = sorted vertex list). */
+    add: ReadonlyArray<ReadonlyArray<string>>;
+}
+export interface PersistencePair {
+    /** Homology dimension. */
+    dim: number;
+    /** Birth filtration value. */
+    birth: number;
+    /** Death filtration value; +∞ for essential (immortal) classes. */
+    death: number;
+    /** Persistence d − b (∞ for essential). */
+    persistence: number;
+    /** Optional witness — birth simplex + death simplex (vertex tuples). */
+    birthSimplex: ReadonlyArray<string>;
+    deathSimplex?: ReadonlyArray<string>;
+}
+export interface PersistenceDiagram {
+    pairs: PersistencePair[];
+    /** Maximum persistence over the diagram (excluding ∞). */
+    maxFinitePersistence: number;
+    /** Count of essential classes per dimension. */
+    essentialByDim: Record<number, number>;
+}
+/**
+ * Compute 0-dimensional persistent homology from a vertex filtration.
+ * Algorithm: Union-Find with elder rule (Eldership: when two components
+ * merge, the YOUNGER one dies at the merge filtration value).
+ */
+export declare function persistentHomology0(filtration: ReadonlyArray<FiltrationStep>): PersistenceDiagram;
+/**
+ * Bottleneck distance between two persistence diagrams (1D matching).
+ * Uses Wasserstein-∞ approximation via greedy nearest-neighbour matching
+ * (good enough for the AI-memory PAIN-003 drift use case where diagrams
+ * are small). Bottleneck distance W_∞ = max_pair |Δb| ∨ |Δd|.
+ */
+export declare function bottleneckDistance(a: PersistenceDiagram, b: PersistenceDiagram): number;
+//# sourceMappingURL=persistence.d.ts.map

package/dist/chronosheaf/persistence.d.ts.map

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