npm - @mmnto/totem - Versions diffs - 1.97.0 → 1.98.0 - Mend

@mmnto/totem 1.97.0 → 1.98.0

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Files changed (10) hide show

package/dist/ingest/pipeline.d.ts +20 -0
package/dist/ingest/pipeline.d.ts.map +1 -1
package/dist/ingest/pipeline.js +75 -18
package/dist/ingest/pipeline.js.map +1 -1
package/dist/ingest/pipeline.test.js +52 -1
package/dist/ingest/pipeline.test.js.map +1 -1
package/dist/types.d.ts +10 -0
package/dist/types.d.ts.map +1 -1
package/dist/types.js.map +1 -1
package/package.json +1 -1

package/dist/ingest/pipeline.d.ts CHANGED Viewed

@@ -85,4 +85,24 @@ export declare function runSync(config: TotemConfig, options: SyncOptions): Prom
  * advanced past, and de-targeted / newly-ignored files git never reports.
  */
 export declare function computeOrphanPaths(indexedRawPaths: string[], liveRelativePaths: string[]): string[];
+/**
+ * Order-normalized content hash of the effective index-exclusion set
+ * (`ignorePatterns` ∪ `indexIgnorePatterns`). Patterns are sorted before hashing
+ * so reordering the config is not a spurious mismatch — only a membership change
+ * (a pattern added or removed) moves the hash. Persisted in sync state to detect
+ * ignore-pattern REMOVALS between incremental syncs (mmnto-ai/totem#2366), which
+ * the git-diff window alone never surfaces. Uses the one deterministic-hash
+ * convention shared with run artifacts.
+ */
+export declare function hashIndexExclusionSet(patterns: string[]): string;
+/**
+ * Files that are index-eligible now but absent from the index — the symmetric
+ * complement of {@link computeOrphanPaths} (mmnto-ai/totem#2366). Removing an
+ * ignore pattern makes files eligible without changing their bytes, so the git
+ * diff window never reports them; this recovers them by membership alone
+ * (live-vs-indexed), independent of the diff. Compares on a separator-normalized
+ * key like the orphan pass but RETURNS THE RAW live relative path (the caller
+ * re-embeds via the resolved file record).
+ */
+export declare function computeNewlyEligiblePaths(liveRelativePaths: string[], indexedRawPaths: string[]): string[];
 //# sourceMappingURL=pipeline.d.ts.map

package/dist/ingest/pipeline.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"pipeline.d.ts","sourceRoot":"","sources":["../../src/ingest/pipeline.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAQvD,OAAO,KAAK,EAAS,WAAW,EAAa,MAAM,aAAa,CAAC;AAyCjE;;;GAGG;AACH;;;;;GAKG;AACH,wBAAgB,eAAe,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,WAAW,GAAG,IAAI,CAuB3E;AAmCD;;;;;;;;GAQG;AACH,MAAM,WAAW,gBAAgB;IAC/B,UAAU,EAAE,MAAM,CAAC;IACnB;;;;OAIG;IACH,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,+FAA+F;IAC/F,UAAU,EAAE,MAAM,CAAC;CACpB;AAED;;;;;;;;;;;GAWG;AACH,MAAM,WAAW,aAAa;IAC5B,MAAM,EAAE,MAAM,CAAC;IACf,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,gBAAgB,EAAE,CAAC;IAC9B,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,2EAA2E;AAC3E,eAAO,MAAM,qBAAqB,8BAA8B,CAAC;AAEjE;;;;;;;;;;;;GAYG;AACH,wBAAgB,kBAAkB,CAAC,KAAK,EAAE;IACxC,SAAS,EAAE,gBAAgB,EAAE,CAAC;IAC9B,OAAO,EAAE,MAAM,GAAG,IAAI,GAAG,SAAS,CAAC;IACnC,SAAS,EAAE,IAAI,CAAC;CACjB,GAAG,aAAa,CAUhB;AAED,wBAAsB,OAAO,CAC3B,MAAM,EAAE,WAAW,EACnB,OAAO,EAAE,WAAW,GACnB,OAAO,CAAC;IACT,eAAe,EAAE,MAAM,CAAC;IACxB,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,aAAa,EAAE,MAAM,CAAC;CACvB,CAAC,CAUD;AAYD;;;;;;;GAOG;AACH,wBAAgB,kBAAkB,CAChC,eAAe,EAAE,MAAM,EAAE,EACzB,iBAAiB,EAAE,MAAM,EAAE,GAC1B,MAAM,EAAE,CAGV;AAED;;;;;;;;GAQG;AACH,wBAAgB,qBAAqB,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,MAAM,CAIhE;AAED;;;;;;;;GAQG;AACH,wBAAgB,yBAAyB,CACvC,iBAAiB,EAAE,MAAM,EAAE,EAC3B,eAAe,EAAE,MAAM,EAAE,GACxB,MAAM,EAAE,CAGV"}

package/dist/ingest/pipeline.js CHANGED Viewed

@@ -1,5 +1,6 @@
 import * as fs from 'node:fs';
 import * as path from 'node:path';
+import { calculateDeterministicHash } from '../artifacts/hash.js';
 import { createChunker } from '../chunkers/chunker.js';
 import { requireEmbedding } from '../config-schema.js';
 import { createEmbedder } from '../embedders/embedder.js';
@@ -141,6 +142,33 @@ export function computeOrphanPaths(indexedRawPaths, liveRelativePaths) {
     const live = new Set(liveRelativePaths.map(normalizeRel));
     return indexedRawPaths.filter((raw) => !live.has(normalizeRel(raw)));
 }
+/**
+ * Order-normalized content hash of the effective index-exclusion set
+ * (`ignorePatterns` ∪ `indexIgnorePatterns`). Patterns are sorted before hashing
+ * so reordering the config is not a spurious mismatch — only a membership change
+ * (a pattern added or removed) moves the hash. Persisted in sync state to detect
+ * ignore-pattern REMOVALS between incremental syncs (mmnto-ai/totem#2366), which
+ * the git-diff window alone never surfaces. Uses the one deterministic-hash
+ * convention shared with run artifacts.
+ */
+export function hashIndexExclusionSet(patterns) {
+    // calculateDeterministicHash treats array order as significant — the .sort()
+    // here IS the order-independence invariant. Do not remove or move it.
+    return calculateDeterministicHash([...patterns].sort());
+}
+/**
+ * Files that are index-eligible now but absent from the index — the symmetric
+ * complement of {@link computeOrphanPaths} (mmnto-ai/totem#2366). Removing an
+ * ignore pattern makes files eligible without changing their bytes, so the git
+ * diff window never reports them; this recovers them by membership alone
+ * (live-vs-indexed), independent of the diff. Compares on a separator-normalized
+ * key like the orphan pass but RETURNS THE RAW live relative path (the caller
+ * re-embeds via the resolved file record).
+ */
+export function computeNewlyEligiblePaths(liveRelativePaths, indexedRawPaths) {
+    const indexed = new Set(indexedRawPaths.map(normalizeRel));
+    return liveRelativePaths.filter((rel) => !indexed.has(normalizeRel(rel)));
+}
 async function runSyncInner(config, options) {
     const { projectRoot, onProgress } = options;
     let incremental = options.incremental;
@@ -164,18 +192,22 @@ async function runSyncInner(config, options) {
     // `ignorePatterns` (legacy dual-scope) + `indexIgnorePatterns` (index-only,
     // mmnto-ai/totem#1748) — only the former also gates lint/shield scope.
     const totemDir = path.join(projectRoot, config.totemDir);
-    const allFiles = resolveFiles(config.targets, projectRoot, [...config.ignorePatterns, ...config.indexIgnorePatterns], log);
+    const exclusionPatterns = [...config.ignorePatterns, ...config.indexIgnorePatterns];
+    const allFiles = resolveFiles(config.targets, projectRoot, exclusionPatterns, log);
+    // Order-normalized hash of the effective exclusion set — persisted below and
+    // compared on the next incremental sync to catch pattern REMOVALS (#2366).
+    const indexExclusionHash = hashIndexExclusionSet(exclusionPatterns);
     let filesToProcess;
     let deletedPaths = [];
     if (incremental) {
+        // Persisted sync state carries both the diff baseline (lastSyncSha) and the
+        // exclusion-set hash used for removal reconciliation (mmnto-ai/totem#2366).
+        const syncState = readSyncState(totemDir, log);
         // Determine the ref to diff against: saved sync state > fallback HEAD~1
         let sinceRef = 'HEAD~1';
-        if (!options.changedFiles) {
-            const syncState = readSyncState(totemDir, log);
-            if (syncState) {
-                sinceRef = syncState.lastSyncSha;
-                log(`Resuming from last sync at ${sinceRef.slice(0, 8)}...`);
-            }
+        if (!options.changedFiles && syncState) {
+            sinceRef = syncState.lastSyncSha;
+            log(`Resuming from last sync at ${sinceRef.slice(0, 8)}...`);
         }
         const changedPaths = options.changedFiles ?? getChangedFiles(projectRoot, sinceRef, log);
         if (changedPaths === null) {
@@ -186,21 +218,45 @@ async function runSyncInner(config, options) {
         }
         else {
             const changedSet = new Set(changedPaths);
-            // Re-embed stays diff-scoped: only changed files that still exist.
-            filesToProcess = allFiles.filter((f) => changedSet.has(f.relativePath));
-            // Deletion is reconciliation-based, NOT diff-derived (mmnto-ai/totem#2151):
-            // purge any indexed path no longer in the working tree, regardless of the
-            // git diff window — self-heals deletions, renames-into-ignored, and
-            // de-targeted files even after the baseline advanced past them. On read
-            // failure, skip the purge this run (warn, no false purge); a later sync heals.
+            let newlyEligible = new Set();
+            // Reconciliation is NOT diff-derived (mmnto-ai/totem#2151, #2366): both the
+            // orphan purge and the newly-eligible enqueue below read the indexed set
+            // once and compare against the live tree, independent of the git diff
+            // window. On a getDistinctPaths read failure, skip BOTH this run (warn, no
+            // false purge / no spurious enqueue); a later sync reconciles.
             try {
-                deletedPaths = computeOrphanPaths(await store.getDistinctPaths(), allFiles.map((f) => f.relativePath));
+                const indexedPaths = await store.getDistinctPaths();
+                const liveRelPaths = allFiles.map((f) => f.relativePath);
+                // Deletion (ADDITION direction): purge any indexed path no longer in the
+                // working tree — self-heals deletions, renames-into-ignored, and
+                // de-targeted / newly-ignored files even after the baseline advanced past
+                // them.
+                deletedPaths = computeOrphanPaths(indexedPaths, liveRelPaths);
+                // Ignore-pattern REMOVAL reconciliation: symmetric to the orphan pass. A
+                // pattern removed from the exclusion set makes files index-eligible
+                // without changing their bytes, so the diff window never surfaces them. A
+                // change in the stored order-normalized exclusion hash — or its ABSENCE
+                // (state predating #2366) — enqueues the newly-eligible set (live −
+                // indexed). The union naturally reduces to the diff alone when the
+                // exclusion set is unchanged, and on a pure ADDITION the newly-eligible
+                // files are all already in the changed set.
+                if (syncState?.indexExclusionHash !== indexExclusionHash) {
+                    newlyEligible = new Set(computeNewlyEligiblePaths(liveRelPaths, indexedPaths));
+                }
                 // totem-context: intentional warn+skip on a getDistinctPaths read failure (mmnto-ai/totem#2151 Q3, cohort-endorsed) — never a false purge; a later sync reconciles, and the Warning below means it is not silent degradation.
             }
             catch (err) {
                 log(`  Warning: orphan reconciliation skipped (getDistinctPaths failed): ${err instanceof Error ? err.message : String(err)}`);
             }
-            log(`Incremental sync: ${filesToProcess.length} changed files` +
+            // Re-embed the changed files (diff-scoped) UNION the newly-eligible set an
+            // ignore-pattern removal exposed (#2366); every path in either set still
+            // exists (both derive from allFiles / the live tree).
+            filesToProcess = allFiles.filter((f) => changedSet.has(f.relativePath) || newlyEligible.has(f.relativePath));
+            // Count only the extras the exclusion-set change pulled back in (those not
+            // already surfaced by the diff), so the log reports honest reconciliation work.
+            const reconciledCount = [...newlyEligible].filter((rel) => !changedSet.has(rel)).length;
+            log(`Incremental sync: ${filesToProcess.length} file(s) to process` +
+                (reconciledCount > 0 ? `, ${reconciledCount} newly-eligible` : '') +
                 (deletedPaths.length > 0 ? `, ${deletedPaths.length} orphan candidate(s)` : '') +
                 ` (of ${allFiles.length} total)`);
         }
@@ -311,9 +367,10 @@ async function runSyncInner(config, options) {
             ? 'FTS index ready.'
             : 'FTS index skipped (hybrid search will use vector-only).');
     }
-    // Persist sync state so next incremental sync knows where to diff from
+    // Persist sync state so the next incremental sync knows where to diff from and
+    // can detect an ignore-pattern change (including a removal) via the hash (#2366).
     if (headSha) {
-        writeSyncState(totemDir, { lastSyncSha: headSha, timestamp: Date.now() });
+        writeSyncState(totemDir, { lastSyncSha: headSha, timestamp: Date.now(), indexExclusionHash });
     }
     // Persist index metadata for dimension mismatch detection
     writeIndexMeta(totemDir, {

package/dist/ingest/pipeline.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/ingest/pipeline.test.js CHANGED Viewed

@@ -4,7 +4,7 @@ import * as path from 'node:path';
 import { afterEach, beforeEach, describe, expect, it } from 'vitest';
 import { TotemConfigSchema } from '../config-schema.js';
 import { cleanTmpDir } from '../test-utils.js';
-import { buildIndexManifest, computeOrphanPaths, INDEX_MANIFEST_SCHEMA, runSync, } from './pipeline.js';
+import { buildIndexManifest, computeNewlyEligiblePaths, computeOrphanPaths, hashIndexExclusionSet, INDEX_MANIFEST_SCHEMA, runSync, } from './pipeline.js';
 // Import the internal helpers via a workaround — we test the state file contract
 // since readSyncState/writeSyncState are not exported directly.
 const SYNC_STATE_FILE = 'cache/sync-state.json';
@@ -85,6 +85,57 @@ describe('orphan reconciliation (computeOrphanPaths)', () => {
         expect(computeOrphanPaths(['src/orphan.ts'], ['src/kept.ts'])).toEqual(['src/orphan.ts']);
     });
 });
+describe('index-exclusion hash (hashIndexExclusionSet) — #2366', () => {
+    it('(d) reordering patterns does NOT change the hash (order-normalized)', () => {
+        // A config reorder must not read as an exclusion-set change and trigger a
+        // spurious newly-eligible re-enqueue.
+        expect(hashIndexExclusionSet(['a/**', 'b/**', 'c/**'])).toBe(hashIndexExclusionSet(['c/**', 'a/**', 'b/**']));
+    });
+    it('a membership change (a removed pattern) DOES change the hash', () => {
+        expect(hashIndexExclusionSet(['dist/**', 'vendor/**'])).not.toBe(hashIndexExclusionSet(['dist/**']));
+    });
+    it('an empty set hashes stably and differs from any non-empty set', () => {
+        expect(hashIndexExclusionSet([])).toBe(hashIndexExclusionSet([]));
+        expect(hashIndexExclusionSet([])).not.toBe(hashIndexExclusionSet(['dist/**']));
+    });
+});
+describe('newly-eligible reconciliation (computeNewlyEligiblePaths) — #2366', () => {
+    it('(a) a previously-ignored file that is now live but not indexed is enqueued', () => {
+        // vendor/lib.ts was excluded → never indexed; the pattern was removed → it is
+        // now in the live set. Its bytes are unchanged (absent from the git diff), so
+        // only the membership pass recovers it.
+        expect(computeNewlyEligiblePaths(['src/a.ts', 'vendor/lib.ts'], ['src/a.ts'])).toEqual([
+            'vendor/lib.ts',
+        ]);
+    });
+    it('(b) hash match → the reconciliation branch never runs; an up-to-date index yields nothing new', () => {
+        const patterns = ['dist/**', 'vendor/**'];
+        // Same effective set across syncs → hashes equal → runSync guards the branch off.
+        expect(hashIndexExclusionSet(patterns)).toBe(hashIndexExclusionSet([...patterns]));
+        // And even if it were evaluated, an up-to-date index (live ⊆ indexed) adds nothing.
+        expect(computeNewlyEligiblePaths(['src/a.ts', 'src/b.ts'], ['src/a.ts', 'src/b.ts'])).toEqual([]);
+    });
+    it('(c) an absent stored hash is treated as a mismatch — the first-run scan recovers unindexed files and is benign when up to date', () => {
+        // Sync state predating #2366 has no indexExclusionHash; runSync compares
+        // `undefined !== currentHash` → mismatch → the newly-eligible pass runs.
+        // On a partially-unindexed tree that one-time scan recovers exactly the gap…
+        expect(computeNewlyEligiblePaths(['src/a.ts', 'docs/uncovered.md'], ['src/a.ts'])).toEqual([
+            'docs/uncovered.md',
+        ]);
+        // …and on an up-to-date index (live ⊆ indexed) the enqueue is empty, so the
+        // absent-hash mismatch costs existing consumers nothing.
+        expect(computeNewlyEligiblePaths(['src/a.ts', 'src/b.ts'], ['src/a.ts', 'src/b.ts'])).toEqual([]);
+    });
+    it('separator-normalized like the orphan pass: a backslash-indexed live file is not re-enqueued', () => {
+        expect(computeNewlyEligiblePaths(['src/live.ts'], ['src\\live.ts'])).toEqual([]);
+    });
+    it('returns raw live paths so the caller re-embeds via the resolved file record', () => {
+        expect(computeNewlyEligiblePaths(['docs/new.md', 'src/a.ts'], [])).toEqual([
+            'docs/new.md',
+            'src/a.ts',
+        ]);
+    });
+});
 describe('runSync embedding guard', () => {
     it('throws when embedding is not configured (Lite tier)', async () => {
         const config = TotemConfigSchema.parse({

package/dist/ingest/pipeline.test.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/types.d.ts CHANGED Viewed

@@ -120,6 +120,16 @@ export interface SyncOptions {
 export interface SyncState {
     lastSyncSha: string;
     timestamp: number;
+    /**
+     * Order-normalized content hash of the effective index-exclusion set
+     * (`ignorePatterns` ∪ `indexIgnorePatterns`) at the last sync. A change on the
+     * next incremental sync means the patterns moved — including a REMOVAL, which
+     * the git-diff window cannot surface — so the newly-eligible files are
+     * re-enqueued (mmnto-ai/totem#2366). Optional: absent in state written before
+     * #2366; readers treat absence as a mismatch (benign — the enqueue is
+     * near-empty for an up-to-date index).
+     */
+    indexExclusionHash?: string;
 }
 /**
  * Options for search queries.

package/dist/types.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@mmnto/totem",
-  "version": "1.97.0",
+  "version": "1.98.0",
   "description": "Core engine for Totem — a local-first, file-anchored substrate that makes AI-agent work queryable, enforceable, and derivable in your codebase",
   "type": "module",
   "engines": {